Miyakogusa Predicted Gene

Lj0g3v0307059.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307059.1 Non Characterized Hit- tr|F6HY96|F6HY96_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.13,0.0000000009,LysM domain,NULL; seg,NULL;
LysM,Peptidoglycan-binding lysin domain,CUFF.20702.1
         (314 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g033490.1 | LysM type receptor kinase | HC | chr5:14419185...   303   1e-82

>Medtr5g033490.1 | LysM type receptor kinase | HC |
           chr5:14419185-14423356 | 20130731
          Length = 613

 Score =  303 bits (777), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 156/314 (49%), Positives = 197/314 (62%), Gaps = 3/314 (0%)

Query: 1   MASFTQLFSFLFPLLATSLHRISAFEVSIKTSVIAPLNCSANIKTCNAFLYHISHNHTVE 60
           MAS  QL S   PLLA+SL  I + EVS+K + + P  CS  ++TCNA LYHI++NH +E
Sbjct: 1   MASLIQLLSIFLPLLASSLPTIFSIEVSMKKAYMEPYKCSTKMRTCNASLYHINYNHNIE 60

Query: 61  EIATFYSVSSSQINPIMYRTRQDYLITVPCSCKITNELSGYFYDTTYTVRPNDIFSNISD 120
           +IA FYS+  SQI PI+  T+QDYL+ VPCSCK   +LSGYFY+TTY V PN+   +I +
Sbjct: 61  QIANFYSIDPSQIKPIIRSTKQDYLVKVPCSCKNIKDLSGYFYETTYKVSPNETSVDIMN 120

Query: 121 LIYSGQAWPVTGTLFPEEHLSIHIPCGCSENESQIVVTYTVQQNDTQTTIANLLNSTRAG 180
           LIYSGQAW V   L   E+++IHIPCGCSE ESQIVVTYTVQQ+DT T+I+ LLN+T  G
Sbjct: 121 LIYSGQAWQVNEDLVANENVTIHIPCGCSEFESQIVVTYTVQQSDTPTSISLLLNATIDG 180

Query: 181 ILSMNIILDKNTGFIDLGWVLFVPKELKGLRVPPSNKKEKKHKNWXXXXXXXXXXXXXXX 240
           ++ +N IL  N  FID+GWVL+VPKELKG   P  + KEKKHK W               
Sbjct: 181 MVRINQILGPNPTFIDIGWVLYVPKELKG--SPLYHGKEKKHK-WVIIIGILVSVTLLSV 237

Query: 241 XXXXXXXXRRKGANQISKEDXXXXXXXXXXXXXXXXMNSNLHTRYISDAMSIESERPVVY 300
                   RR  A + SK D                 N   H  Y+ DA   +SERPV+Y
Sbjct: 238 ITLIIFILRRNKAYETSKYDPKTVSKRSFGNRTISLRNHEFHKEYMEDATQFDSERPVIY 297

Query: 301 NLDDIEEATNYFDD 314
           + ++IE ATN FD+
Sbjct: 298 DFEEIEHATNNFDE 311