Miyakogusa Predicted Gene

Lj0g3v0305669.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0305669.1 Non Characterized Hit- tr|I1JEQ7|I1JEQ7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,45,0.0000000000004,Myb_DNA-bind_3,Myb/SANT-like
domain,CUFF.20574.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g036040.1 | hypothetical protein | HC | chr4:12860079-1286...    57   5e-09

>Medtr4g036040.1 | hypothetical protein | HC |
          chr4:12860079-12862402 | 20130731
          Length = 359

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 12/81 (14%)

Query: 1  MTKGKSQTVEPSQVRNEVLRWTDDMDRMLLNAFSEEAAKGHRCQGSWTIEAYANVLQALQ 60
          M+KGK    +      ++L+W DDMD+ LLNA  EE  KG+R  G             L+
Sbjct: 1  MSKGKGAASQSDNPGRDILQWNDDMDQALLNALREENHKGNRLDG------------VLR 48

Query: 61 IAISPTMMKQHIIIRMRALRA 81
            I PT+ K HI  R++ L+A
Sbjct: 49 SVIDPTITKNHIKNRLKTLKA 69