Miyakogusa Predicted Gene
- Lj0g3v0305549.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0305549.1 Non Chatacterized Hit- tr|I1MZA3|I1MZA3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49575
PE,80.03,0,seg,NULL; PATTERN FORMATION PROTEIN,NULL; GUANYL-NUCLEOTIDE
EXCHANGE FACTOR,NULL,gene.g23809.t1.1
(2013 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO007352 similar to UniRef100_A7PC51 Cluster: Chromosom... 188 9e-47
gnl|LJGI|TC62086 similar to UniRef100_A7PC51 Cluster: Chromosome... 172 5e-42
gnl|LJGI|TC61404 weakly similar to UniRef100_A7PC51 Cluster: Chr... 145 1e-33
gnl|LJGI|TC58627 similar to UniRef100_A7PC51 Cluster: Chromosome... 92 2e-17
>gnl|LJGI|GO007352 similar to UniRef100_A7PC51 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 726
Score = 188 bits (95), Expect = 9e-47
Identities = 266/323 (82%)
Strand = Plus / Plus
Query: 1312 gatctcccacatggactgtggttacagtgttttgatctggtcatctttactgtgcttgat 1371
||||||||||||| |||||||||| |||||||||| || ||||| ||||| ||||||
Sbjct: 1 gatctcccacatgacttgtggttacaatgttttgatcaagtgatcttcactgttcttgat 60
Query: 1372 gacctgcttgaaatttcacagggtcactctcaaaaggattaccgcaacatggaaggcacg 1431
||||||||||||||||| ||| | ||||| |||||| ||||| ||||||||||| ||
Sbjct: 61 gacctgcttgaaatttcccagacactctctccaaaggactaccggaacatggaaggaaca 120
Query: 1432 cttatcttagccatgaagctcttatctaaagtttttctccaaatactccaagatttgtca 1491
| ||| | ||| |||||||||| ||||||||||| ||||| ||||||||| | |||
Sbjct: 121 cctattcttgccttgaagctcttgtctaaagttttcctccagttactccaaggcctttca 180
Query: 1492 caattggcaaccttctgcaaattatggttaggtgtcctaagccgaatggaaaagtatatg 1551
|||||| || |||| ||||||||||||| |||| |||| || |||||| ||||||
Sbjct: 181 caattgccagacttcagcaaattatggttgagtgtactaaatcgcttggaaatatatatg 240
Query: 1552 aaggtgaaagttaggggaaaaagaagtgagaaacttcaagagttagtgcctgaggtgctt 1611
||||||||| |||||||| |||||| ||||| ||||||||| | ||||||||| | ||
Sbjct: 241 aaggtgaaatttaggggacgaagaagcgagaagcttcaagagcttgtgcctgagcttctc 300
Query: 1612 aagaacatcttgcttgttatgaa 1634
||||||| ||||||||||||||
Sbjct: 301 aagaacactttgcttgttatgaa 323
Score = 63.9 bits (32), Expect = 4e-09
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 1678 agtttgtgggaactgacatggctacatgtgaataacatcgctccatctttgcaggcggag 1737
||||| |||||| |||| ||||| ||| | ||||| || ||||| || ||||| | |||
Sbjct: 364 agtttctgggaattgacctggctgcatataaataatattgctccgtcattgcaatctgag 423
Query: 1738 gtcttccctgaacagcattctgagcatttgcagcacaagcagagtgaa 1785
|| ||||||||||| |||| ||||||||||||||||| |||| ||||
Sbjct: 424 gtgttccctgaacaagattcagagcatttgcagcacaaacagactgaa 471
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1873 gaggtcttccctgaacagcattctgagcatttgcagcacaagcagagtgaa 1923
||||| ||||||||||| |||| ||||||||||||||||| |||| ||||
Sbjct: 421 gaggtgttccctgaacaagattcagagcatttgcagcacaaacagactgaa 471
>gnl|LJGI|TC62086 similar to UniRef100_A7PC51 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 1335
Score = 172 bits (87), Expect = 5e-42
Identities = 186/219 (84%)
Strand = Plus / Plus
Query: 533 aaacaatacagaagtgtcacattgacagcatattcactgagagtaaatttcttcaagctg 592
||||||| ||||||| |||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 58 aaacaattcagaagtatcacattgacagcatattcactgaaagtaaatttttgcaagctg 117
Query: 593 aatctctattgcagcttgcaagagcactcatttgggctgcaggtcgagctcagaaaggga 652
|||||||| ||||||| | || |||||||| | | || | || ||| || ||||||||
Sbjct: 118 aatctctactgcagctagtaaaagcactcaatagtgcaggagtgcgacctaagaaagggc 177
Query: 653 acgacacccctgaggatgaagatacagcagttttctgcctggaattgctgattgcaataa 712
|| ||| ||||||||||||||||| |||||||||| |||| || ||| | ||||| |
Sbjct: 178 acagcacacctgaggatgaagatacttcagttttctgtttggagttactggtagcaatca 237
Query: 713 ctttgaataacagggatagaattgcacttctttggcagg 751
|||||||||||||||||||||||| |||||| |||||||
Sbjct: 238 ctttgaataacagggatagaattgaacttctctggcagg 276
Score = 131 bits (66), Expect = 2e-29
Identities = 181/218 (83%), Gaps = 1/218 (0%)
Strand = Plus / Plus
Query: 905 caattacatcactacttgccatcacagctagacacctagaagcctatgagactgggtttg 964
|||||||||| || ||| ||||||| ||||||||| | ||| | | |||| |||| ||||
Sbjct: 544 caattacatctcttctttccatcactgctagacacttggaatcatctgaggctggatttg 603
Query: 965 atgcactattgttcataatgtccaatgcagcccatctgatgccagctaattatgttcttt 1024
||||| | |||||||||||||| ||| ||| | || | |||||||| |||||||| |
Sbjct: 604 atgcattgttgttcataatgtcagatggagcttacttgctcccagctaactatgttctct 663
Query: 1025 gtgtagatgctgctaggcagtttgctgaatctcgtgttggaca-ggcagagcgatctgta 1083
|| |||||||||| | ||||||||| ||||||||||||||||| || |||||| ||||||
Sbjct: 664 gtatagatgctgcgaagcagtttgcggaatctcgtgttggacagggtagagcggtctgta 723
Query: 1084 caggcactagatctcatggcaggctctgtcaattgctt 1121
||| || ||||| |||||||| ||||||||||||||
Sbjct: 724 gtggcgctcgatcttatggcaggatctgtcaattgctt 761
Score = 119 bits (60), Expect = 7e-26
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 754 aaggctgttttcggactcctgaggatttgccagcggttgcttccctacaaagagaacatt 813
||||||||||| |||||||| |||||||| || || |||||||||||||||||||||||
Sbjct: 339 aaggctgtttttggactcctaaggatttgtcatcgcttgcttccctacaaagagaacatg 398
Query: 814 gctgatgaacttcttaggtcattgcaacttgtcttgaagcttgatgcccgggttgc 869
||||||||||| | ||||| | ||||||||||||||||||||||| || |||||
Sbjct: 399 actgatgaacttttgaggtccctacaacttgtcttgaagcttgatgcacgtgttgc 454
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1735 gaggtcttccctgaacagcattctgagcatttgcagcacaagcagagtgaa 1785
||||| ||||||||||| |||| ||||||||||||||||| |||| ||||
Sbjct: 812 gaggtgttccctgaacaagattcagagcatttgcagcacaaacagactgaa 862
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1873 gaggtcttccctgaacagcattctgagcatttgcagcacaagcagagtgaa 1923
||||| ||||||||||| |||| ||||||||||||||||| |||| ||||
Sbjct: 812 gaggtgttccctgaacaagattcagagcatttgcagcacaaacagactgaa 862
>gnl|LJGI|TC61404 weakly similar to UniRef100_A7PC51 Cluster: Chromosome chr2
scaffold_11, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_11, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 877
Score = 145 bits (73), Expect = 1e-33
Identities = 307/385 (79%)
Strand = Plus / Plus
Query: 1364 tgcttgatgacctgcttgaaatttcacagggtcactctcaaaaggattaccgcaacatgg 1423
|||| |||||||||||||||||||| ||| || |||||||||| ||||| |||||||
Sbjct: 97 tgctggatgacctgcttgaaatttctcagacataccctcaaaaggaataccggaacatgg 156
Query: 1424 aaggcacgcttatcttagccatgaagctcttatctaaagtttttctccaaatactccaag 1483
|||| || ||||| | ||| |||||||||||| | ||||||| ||||| |||||||||
Sbjct: 157 aaggaacacttattgttgccttgaagctcttatttgaagttttcctccagttactccaag 216
Query: 1484 atttgtcacaattggcaaccttctgcaaattatggttaggtgtcctaagccgaatggaaa 1543
| | ||||||| | | ||||||||||| ||||| | ||||| |||||||| ||||||
Sbjct: 217 aactatcacaatccgaagccttctgcaaactatgggtgggtgtgctaagccgtgtggaaa 276
Query: 1544 agtatatgaaggtgaaagttaggggaaaaagaagtgagaaacttcaagagttagtgcctg 1603
| | | ||||| |||||| ||||||| ||||||||||| |||||||| | |||||||
Sbjct: 277 aatgtgtgaagatgaaaggtaggggatggagaagtgagaagtttcaagagcttgtgcctg 336
Query: 1604 aggtgcttaagaacatcttgcttgttatgaagacaaaggttatactggtgcagagaagtg 1663
|| || ||||| | |||||||||||||| || | ||||| || |||| |
Sbjct: 337 agcatctgaagaaaactttgcttgttatgaaatcaggcggcatactagttaagagcgccg 396
Query: 1664 ccttaggtggtgatagtttgtgggaactgacatggctacatgtgaataacatcgctccat 1723
|||||||| | |||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 397 gcttaggtgaaaacagtttgtgggaactgacatggctacatgtgaaaaatattgctccat 456
Query: 1724 ctttgcaggcggaggtcttccctga 1748
| |||||| | ||||| ||||||||
Sbjct: 457 ccttgcagtctgaggtgttccctga 481
>gnl|LJGI|TC58627 similar to UniRef100_A7PC51 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 876
Score = 91.7 bits (46), Expect = 2e-17
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 1489 tcacaattggcaaccttctgcaaattatggttaggtgtcctaagccgaatggaaaagtat 1548
||||||||| || |||| ||||||||||||| |||| |||| || |||||| |||
Sbjct: 47 tcacaattgccagacttcagcaaattatggttgagtgtactaaatcgcttggaaatatat 106
Query: 1549 atgaaggtgaaagttaggggaaaaagaagtgagaaacttcaagagttagtgcctgaggtg 1608
|||||||||||| |||||||| |||||| ||||| ||||||||| | ||||||||| |
Sbjct: 107 atgaaggtgaaatttaggggacgaagaagcgagaagcttcaagagcttgtgcctgagctt 166
Query: 1609 cttaagaacatcttgcttgttatgaa 1634
|| ||||||| ||||||||||||||
Sbjct: 167 ctcaagaacactttgcttgttatgaa 192
Score = 63.9 bits (32), Expect = 4e-09
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 1678 agtttgtgggaactgacatggctacatgtgaataacatcgctccatctttgcaggcggag 1737
||||| |||||| |||| ||||| ||| | ||||| || ||||| || ||||| | |||
Sbjct: 233 agtttctgggaattgacctggctgcatataaataatattgctccgtcattgcaatctgag 292
Query: 1738 gtcttccctgaacagcattctgagcatttgcagcacaagcagagtgaa 1785
|| ||||||||||| |||| ||||||||||||||||| |||| ||||
Sbjct: 293 gtgttccctgaacaagattcagagcatttgcagcacaaacagactgaa 340
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1873 gaggtcttccctgaacagcattctgagcatttgcagcacaagcagagtgaa 1923
||||| ||||||||||| |||| ||||||||||||||||| |||| ||||
Sbjct: 290 gaggtgttccctgaacaagattcagagcatttgcagcacaaacagactgaa 340