Miyakogusa Predicted Gene

Lj0g3v0305439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0305439.1 Non Chatacterized Hit- tr|I1JGL0|I1JGL0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,74.19,0.0000000000001,seg,NULL,CUFF.20554.1
         (62 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1JGL0_SOYBN (tr|I1JGL0) Uncharacterized protein OS=Glycine max ...    69   8e-10
B9SWZ7_RICCO (tr|B9SWZ7) Putative uncharacterized protein OS=Ric...    63   4e-08
B9HBW2_POPTR (tr|B9HBW2) Predicted protein OS=Populus trichocarp...    59   9e-07

>I1JGL0_SOYBN (tr|I1JGL0) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 63

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 47/62 (75%)

Query: 1  MVVWSYPPTARQLAVTGGVFVIGASLLSVGAYLSYVNVAPXXXXXXXXXEAFRNYIRKKF 60
          MV+WSYPPTARQ+AVTGGVFV+G  L  VGAY S+VNVAP         EA RNYI+K+F
Sbjct: 1  MVLWSYPPTARQMAVTGGVFVVGGLLFGVGAYFSFVNVAPQQERLKSRREAMRNYIKKRF 60

Query: 61 GD 62
          GD
Sbjct: 61 GD 62


>B9SWZ7_RICCO (tr|B9SWZ7) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1258600 PE=4 SV=1
          Length = 82

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query: 1  MVVWSYPPTARQLAVTGGVFVIGASLLSVGAYLSYVNVAPXXXXXXXXXEAFRNYIRKKF 60
          MV+WSYPPT  QL VT G+ + GASL++ GA+LS VNVAP         +  ++ +RK  
Sbjct: 21 MVLWSYPPTKNQLLVTVGLAIAGASLIAYGAHLSLVNVAPQQARAKARKDYIKDRLRKML 80

Query: 61 GD 62
           D
Sbjct: 81 DD 82


>B9HBW2_POPTR (tr|B9HBW2) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_561457 PE=4 SV=1
          Length = 61

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 37/61 (60%)

Query: 2  VVWSYPPTARQLAVTGGVFVIGASLLSVGAYLSYVNVAPXXXXXXXXXEAFRNYIRKKFG 61
          ++W+YPPT +QLA T G+F+ GASL   GAY+S  N+AP         +  ++ +RK   
Sbjct: 1  MIWAYPPTRKQLAATVGLFLTGASLSVYGAYMSLANIAPQQARTKARSDYIKDRLRKMLD 60

Query: 62 D 62
          D
Sbjct: 61 D 61