Miyakogusa Predicted Gene

Lj0g3v0305439.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0305439.1 Non Chatacterized Hit- tr|I1JGL0|I1JGL0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,74.19,0.0000000000001,seg,NULL,CUFF.20554.1
         (62 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36080.1                                                        69   2e-12

>Glyma02g36080.1 
          Length = 63

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 47/62 (75%)

Query: 1  MVVWSYPPTARQLAVTGGVFVIGASLLSVGAYLSYVNVAPXXXXXXXXXEAFRNYIRKKF 60
          MV+WSYPPTARQ+AVTGGVFV+G  L  VGAY S+VNVAP         EA RNYI+K+F
Sbjct: 1  MVLWSYPPTARQMAVTGGVFVVGGLLFGVGAYFSFVNVAPQQERLKSRREAMRNYIKKRF 60

Query: 61 GD 62
          GD
Sbjct: 61 GD 62