Miyakogusa Predicted Gene

Lj0g3v0301919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0301919.1 Non Chatacterized Hit- tr|I3LR72|I3LR72_PIG
Uncharacterized protein OS=Sus scrofa GN=Ssc.27897 PE=4
,27.74,2e-18,seg,NULL; BINDING,NULL; FAMILY NOT NAMED,NULL; no
description,Armadillo-like helical; ARM repeat,Arm,CUFF.20297.1
         (336 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g41190.2                                                       539   e-153

>Glyma08g41190.2 
          Length = 336

 Score =  539 bits (1389), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/323 (82%), Positives = 284/323 (87%)

Query: 1   MATELEELVSFLTCPSPQITKAAVDIVRGLTGSDDGLHSLANHANTLIPALSRLLTALKE 60
           MATE+EELVSFL+  SPQITKAAVDIVRGLTGS +GL SLAN++N L+PALSRLLT  KE
Sbjct: 1   MATEMEELVSFLSSTSPQITKAAVDIVRGLTGSMEGLQSLANYSNALLPALSRLLTLPKE 60

Query: 61  VSEAAAEALVNLSQNLNLAAEMVQMRLIDTAMDVLYKPDCSXXXXXXXXXXXXXXXDAGI 120
           VSEAAAEALVNLSQN +LA  MV + L+ T MDVLYKP+CS               +AG 
Sbjct: 61  VSEAAAEALVNLSQNSSLAEAMVGIGLVKTTMDVLYKPECSIARLLVMLLVNLTQLEAGA 120

Query: 121 ASLLQIEDDKVRGLYVMKLVRSFCRTTHESDDDAFEHVGSILVNISKQRAGRELLLDPKR 180
           ASLLQ ED+KV GLYVMKLVRSFCRT+HES+DDAFEHVGSILVNISKQR GRELLLDPKR
Sbjct: 121 ASLLQTEDEKVHGLYVMKLVRSFCRTSHESNDDAFEHVGSILVNISKQRKGRELLLDPKR 180

Query: 181 GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIY 240
           GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVA NKIY
Sbjct: 181 GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVASNKIY 240

Query: 241 SDVDRSKMPLELGTALSIEREPVSDPEIRTQALEAIYLISLQEAGRRAFWSVNGPKIVQI 300
            + DR KMPLELGTALSIEREPV+DPEIR QALEAIYLI LQEAGRRAFWSVNGP+IVQI
Sbjct: 241 REQDRLKMPLELGTALSIEREPVNDPEIRIQALEAIYLIILQEAGRRAFWSVNGPRIVQI 300

Query: 301 GYEDEEDPKVMEAYEQLGSLLIH 323
           GYEDEEDPKVMEAYEQLGSLL+H
Sbjct: 301 GYEDEEDPKVMEAYEQLGSLLVH 323