Miyakogusa Predicted Gene

Lj0g3v0301919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0301919.1 Non Characterized Hit- tr|I3LR72|I3LR72_PIG
Uncharacterized protein OS=Sus scrofa GN=Ssc.27897 PE=4
,27.74,2e-18,seg,NULL; BINDING,NULL; FAMILY NOT NAMED,NULL; no
description,Armadillo-like helical; ARM repeat,Arm,CUFF.20297.1
         (336 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g055880.1 | armadillo/beta-catenin-like repeat protein | H...   531   e-151
Medtr8g055880.4 | armadillo/beta-catenin-like repeat protein | H...   423   e-118
Medtr8g055880.3 | armadillo/beta-catenin-like repeat protein | H...   386   e-107
Medtr8g055880.5 | armadillo/beta-catenin-like repeat protein | H...   377   e-104
Medtr8g055880.2 | armadillo/beta-catenin-like repeat protein | H...   375   e-104

>Medtr8g055880.1 | armadillo/beta-catenin-like repeat protein | HC |
           chr8:24351347-24344517 | 20130731
          Length = 336

 Score =  531 bits (1368), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/323 (83%), Positives = 290/323 (89%)

Query: 1   MATELEELVSFLTCPSPQITKAAVDIVRGLTGSDDGLHSLANHANTLIPALSRLLTALKE 60
           MATELEELVSFL+ PSPQITKAAVDIVRGLTGS++G+HSLAN +  LI ALSRLLTA +E
Sbjct: 1   MATELEELVSFLSSPSPQITKAAVDIVRGLTGSEEGIHSLANQSKNLISALSRLLTAPEE 60

Query: 61  VSEAAAEALVNLSQNLNLAAEMVQMRLIDTAMDVLYKPDCSXXXXXXXXXXXXXXXDAGI 120
           VSEAAAEALVNLSQN NLA EMV+++L++T MDVLYKP+C                DAG 
Sbjct: 61  VSEAAAEALVNLSQNSNLAEEMVKLKLVETTMDVLYKPECCVTRLLVMLLVNLTQLDAGT 120

Query: 121 ASLLQIEDDKVRGLYVMKLVRSFCRTTHESDDDAFEHVGSILVNISKQRAGRELLLDPKR 180
            SLLQI+D+KVRGLYVMKLVRSFCRTTHE DDD+FEHVGSILVNI+KQRAGRELLLDPKR
Sbjct: 121 DSLLQIDDEKVRGLYVMKLVRSFCRTTHEKDDDSFEHVGSILVNITKQRAGRELLLDPKR 180

Query: 181 GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIY 240
           GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIY
Sbjct: 181 GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIY 240

Query: 241 SDVDRSKMPLELGTALSIEREPVSDPEIRTQALEAIYLISLQEAGRRAFWSVNGPKIVQI 300
           S+ DR KMPLELGTALSIEREPV+DPEIRTQ LEAIYLI LQEAGRRAFWSVNGP+IVQ+
Sbjct: 241 SEEDRKKMPLELGTALSIEREPVNDPEIRTQVLEAIYLILLQEAGRRAFWSVNGPRIVQV 300

Query: 301 GYEDEEDPKVMEAYEQLGSLLIH 323
           GYEDEEDPKVM AYEQLGSLLI+
Sbjct: 301 GYEDEEDPKVMGAYEQLGSLLIN 323


>Medtr8g055880.4 | armadillo/beta-catenin-like repeat protein | HC |
           chr8:24351332-24344566 | 20130731
          Length = 255

 Score =  423 bits (1088), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 202/242 (83%), Positives = 217/242 (89%)

Query: 82  MVQMRLIDTAMDVLYKPDCSXXXXXXXXXXXXXXXDAGIASLLQIEDDKVRGLYVMKLVR 141
           MV+++L++T MDVLYKP+C                DAG  SLLQI+D+KVRGLYVMKLVR
Sbjct: 1   MVKLKLVETTMDVLYKPECCVTRLLVMLLVNLTQLDAGTDSLLQIDDEKVRGLYVMKLVR 60

Query: 142 SFCRTTHESDDDAFEHVGSILVNISKQRAGRELLLDPKRGLLKQIIRQFDSNSSLRKKGV 201
           SFCRTTHE DDD+FEHVGSILVNI+KQRAGRELLLDPKRGLLKQIIRQFDSNSSLRKKGV
Sbjct: 61  SFCRTTHEKDDDSFEHVGSILVNITKQRAGRELLLDPKRGLLKQIIRQFDSNSSLRKKGV 120

Query: 202 SGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIYSDVDRSKMPLELGTALSIERE 261
           SGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIYS+ DR KMPLELGTALSIERE
Sbjct: 121 SGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIYSEEDRKKMPLELGTALSIERE 180

Query: 262 PVSDPEIRTQALEAIYLISLQEAGRRAFWSVNGPKIVQIGYEDEEDPKVMEAYEQLGSLL 321
           PV+DPEIRTQ LEAIYLI LQEAGRRAFWSVNGP+IVQ+GYEDEEDPKVM AYEQLGSLL
Sbjct: 181 PVNDPEIRTQVLEAIYLILLQEAGRRAFWSVNGPRIVQVGYEDEEDPKVMGAYEQLGSLL 240

Query: 322 IH 323
           I+
Sbjct: 241 IN 242


>Medtr8g055880.3 | armadillo/beta-catenin-like repeat protein | HC |
           chr8:24351347-24344566 | 20130731
          Length = 237

 Score =  386 bits (992), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/202 (91%), Positives = 195/202 (96%)

Query: 122 SLLQIEDDKVRGLYVMKLVRSFCRTTHESDDDAFEHVGSILVNISKQRAGRELLLDPKRG 181
           +L+ I+D+KVRGLYVMKLVRSFCRTTHE DDD+FEHVGSILVNI+KQRAGRELLLDPKRG
Sbjct: 23  NLMLIDDEKVRGLYVMKLVRSFCRTTHEKDDDSFEHVGSILVNITKQRAGRELLLDPKRG 82

Query: 182 LLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIYS 241
           LLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIYS
Sbjct: 83  LLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIYS 142

Query: 242 DVDRSKMPLELGTALSIEREPVSDPEIRTQALEAIYLISLQEAGRRAFWSVNGPKIVQIG 301
           + DR KMPLELGTALSIEREPV+DPEIRTQ LEAIYLI LQEAGRRAFWSVNGP+IVQ+G
Sbjct: 143 EEDRKKMPLELGTALSIEREPVNDPEIRTQVLEAIYLILLQEAGRRAFWSVNGPRIVQVG 202

Query: 302 YEDEEDPKVMEAYEQLGSLLIH 323
           YEDEEDPKVM AYEQLGSLLI+
Sbjct: 203 YEDEEDPKVMGAYEQLGSLLIN 224


>Medtr8g055880.5 | armadillo/beta-catenin-like repeat protein | HC |
           chr8:24351347-24344566 | 20130731
          Length = 244

 Score =  377 bits (967), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/239 (81%), Positives = 211/239 (88%)

Query: 1   MATELEELVSFLTCPSPQITKAAVDIVRGLTGSDDGLHSLANHANTLIPALSRLLTALKE 60
           MATELEELVSFL+ PSPQITKAAVDIVRGLTGS++G+HSLAN +  LI ALSRLLTA +E
Sbjct: 1   MATELEELVSFLSSPSPQITKAAVDIVRGLTGSEEGIHSLANQSKNLISALSRLLTAPEE 60

Query: 61  VSEAAAEALVNLSQNLNLAAEMVQMRLIDTAMDVLYKPDCSXXXXXXXXXXXXXXXDAGI 120
           VSEAAAEALVNLSQN NLA EMV+++L++T MDVLYKP+C                DAG 
Sbjct: 61  VSEAAAEALVNLSQNSNLAEEMVKLKLVETTMDVLYKPECCVTRLLVMLLVNLTQLDAGT 120

Query: 121 ASLLQIEDDKVRGLYVMKLVRSFCRTTHESDDDAFEHVGSILVNISKQRAGRELLLDPKR 180
            SLLQI+D+KVRGLYVMKLVRSFCRTTHE DDD+FEHVGSILVNI+KQRAGRELLLDPKR
Sbjct: 121 DSLLQIDDEKVRGLYVMKLVRSFCRTTHEKDDDSFEHVGSILVNITKQRAGRELLLDPKR 180

Query: 181 GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKI 239
           GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNK+
Sbjct: 181 GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKV 239


>Medtr8g055880.2 | armadillo/beta-catenin-like repeat protein | HC |
           chr8:24351332-24344566 | 20130731
          Length = 240

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/238 (81%), Positives = 210/238 (88%)

Query: 1   MATELEELVSFLTCPSPQITKAAVDIVRGLTGSDDGLHSLANHANTLIPALSRLLTALKE 60
           MATELEELVSFL+ PSPQITKAAVDIVRGLTGS++G+HSLAN +  LI ALSRLLTA +E
Sbjct: 1   MATELEELVSFLSSPSPQITKAAVDIVRGLTGSEEGIHSLANQSKNLISALSRLLTAPEE 60

Query: 61  VSEAAAEALVNLSQNLNLAAEMVQMRLIDTAMDVLYKPDCSXXXXXXXXXXXXXXXDAGI 120
           VSEAAAEALVNLSQN NLA EMV+++L++T MDVLYKP+C                DAG 
Sbjct: 61  VSEAAAEALVNLSQNSNLAEEMVKLKLVETTMDVLYKPECCVTRLLVMLLVNLTQLDAGT 120

Query: 121 ASLLQIEDDKVRGLYVMKLVRSFCRTTHESDDDAFEHVGSILVNISKQRAGRELLLDPKR 180
            SLLQI+D+KVRGLYVMKLVRSFCRTTHE DDD+FEHVGSILVNI+KQRAGRELLLDPKR
Sbjct: 121 DSLLQIDDEKVRGLYVMKLVRSFCRTTHEKDDDSFEHVGSILVNITKQRAGRELLLDPKR 180

Query: 181 GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNK 238
           GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNK
Sbjct: 181 GLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNK 238