Miyakogusa Predicted Gene

Lj0g3v0301529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0301529.1 Non Characterized Hit- tr|I3SSV0|I3SSV0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,99.11,0,DnaJ,Heat
shock protein DnaJ, N-terminal; UNCHARACTERIZED,NULL; Chaperone
J-domain,Heat shock protei,CUFF.20256.1
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g117745.1 | import inner membrane translocase subunit TIM1...   157   2e-39
Medtr1g066810.1 | import inner membrane translocase subunit TIM1...   130   3e-31

>Medtr7g117745.1 | import inner membrane translocase subunit TIM14 |
           HC | chr7:48905639-48901605 | 20130731
          Length = 110

 Score =  157 bits (397), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 73/94 (77%), Positives = 83/94 (88%), Gaps = 2/94 (2%)

Query: 19  RYSIQAWQALKARPPKPRIRKFYDGGFQPTMTRREAALILGIRENATADKVKEAHRKVMV 78
           +Y IQAWQA KARPP   +RKFY+GGFQPTMT+REAALILG+R+    DK+KEAHR+VMV
Sbjct: 19  KYGIQAWQAFKARPPA--LRKFYEGGFQPTMTKREAALILGVRQTTPTDKIKEAHRRVMV 76

Query: 79  ANHPDAGGSHYLASKINEAKDVMLRKTKGSGSAF 112
           ANHPDAGGSHYLASKINEAKD+M+ KTKG GSAF
Sbjct: 77  ANHPDAGGSHYLASKINEAKDMMIGKTKGGGSAF 110


>Medtr1g066810.1 | import inner membrane translocase subunit TIM14 |
           HC | chr1:28712886-28715421 | 20130731
          Length = 110

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/94 (67%), Positives = 75/94 (79%), Gaps = 2/94 (2%)

Query: 19  RYSIQAWQALKARPPKPRIRKFYDGGFQPTMTRREAALILGIRENATADKVKEAHRKVMV 78
           RYSIQ WQA  ARP    +RKFY+GGF+  M +REAA ILG+R      K+KEAHR++MV
Sbjct: 19  RYSIQTWQAFMARPAG--MRKFYEGGFKAIMDKREAARILGVRPTVPIVKIKEAHRRMMV 76

Query: 79  ANHPDAGGSHYLASKINEAKDVMLRKTKGSGSAF 112
           ANHPDAGGSH++ASKINEAKD++L KTKG GSAF
Sbjct: 77  ANHPDAGGSHHVASKINEAKDMLLGKTKGGGSAF 110