Miyakogusa Predicted Gene

Lj0g3v0300909.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300909.3 Non Characterized Hit- tr|A5C9J2|A5C9J2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.07,3e-19,seg,NULL; DUF4308,Domain of unknown function
DUF4308,CUFF.20247.3
         (145 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g013200.1 | thylakoid membrane phosphoprotein 14 kDa prote...   192   8e-50
Medtr7g118290.1 | thylakoid membrane phosphoprotein 14 kDa prote...    92   2e-19
Medtr8g024180.1 | thylakoid membrane phosphoprotein 14 kDa prote...    85   2e-17
Medtr5g032440.1 | threonine endopeptidase | HC | chr5:13932332-1...    77   7e-15
Medtr7g116795.1 | thylakoid membrane phosphoprotein 14 kDa prote...    71   3e-13
Medtr7g118290.2 | thylakoid membrane phosphoprotein 14 kDa prote...    57   7e-09

>Medtr4g013200.1 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr4:3579932-3583601 | 20130731
          Length = 146

 Score =  192 bits (488), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 103/146 (70%), Positives = 110/146 (75%), Gaps = 1/146 (0%)

Query: 1   MASIAASLQPPLLLHGRKSHTGNFPSFPVSLLP-GRRNLIALVVKASGXXXXXXXXXXXX 59
           MASI ASL PPLLLHGR S  GNF +F VS LP GRR+ +  VVKASG            
Sbjct: 1   MASIIASLPPPLLLHGRNSFPGNFQNFSVSSLPPGRRSNVPFVVKASGESSESSTSLTVF 60

Query: 60  XXXXNVWDKPEDRLGLIGFGFAGIVALWASANLITAVDQLPVLPTVLELIGILFSVWFTY 119
               NVWDKPEDRLGL G GFA +VALWAS NLI A+D+LPV+P  LELIGILFSVWFTY
Sbjct: 61  KSVQNVWDKPEDRLGLFGLGFAAVVALWASTNLIAAIDKLPVIPISLELIGILFSVWFTY 120

Query: 120 RYLLFKPDREELFQILNKSVSDILGQ 145
           RYLLFKPDREELFQILNKS SDILGQ
Sbjct: 121 RYLLFKPDREELFQILNKSTSDILGQ 146


>Medtr7g118290.1 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr7:49092785-49094059 | 20130731
          Length = 180

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 56/81 (69%)

Query: 64  NVWDKPEDRLGLIGFGFAGIVALWASANLITAVDQLPVLPTVLELIGILFSVWFTYRYLL 123
             WDK ED+  +     AG VALW SA +I+A+D+LP++P VLEL+GI ++ WF Y+ L+
Sbjct: 97  QTWDKVEDKYAVSALAVAGTVALWGSAGVISAIDRLPLIPGVLELVGIGYTGWFAYKNLV 156

Query: 124 FKPDREELFQILNKSVSDILG 144
           FKP+RE L + +  +V DI G
Sbjct: 157 FKPEREALIRKIKGTVKDITG 177


>Medtr8g024180.1 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr8:8854877-8852692 | 20130731
          Length = 170

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 57/79 (72%)

Query: 66  WDKPEDRLGLIGFGFAGIVALWASANLITAVDQLPVLPTVLELIGILFSVWFTYRYLLFK 125
           WDK +DR  +     A + ALW+   LI+A+D+LP++P VLELIGI ++ WF Y+ ++FK
Sbjct: 90  WDKYDDRYAVSSLVVASVFALWSLTGLISAIDRLPLIPGVLELIGIGYTGWFAYKNVVFK 149

Query: 126 PDREELFQILNKSVSDILG 144
           P+REEL Q + ++++ I+G
Sbjct: 150 PEREELIQKVKETITAIIG 168


>Medtr5g032440.1 | threonine endopeptidase | HC |
           chr5:13932332-13928123 | 20130731
          Length = 182

 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 51/75 (68%)

Query: 71  DRLGLIGFGFAGIVALWASANLITAVDQLPVLPTVLELIGILFSVWFTYRYLLFKPDREE 130
           D   L  +G   IVALW ++ ++ AVD +PV+P + E++G+ +S+WFTYRYLLFK +REE
Sbjct: 108 DTTSLAVYGGGAIVALWLTSAIVGAVDSIPVIPKLFEVVGLGYSLWFTYRYLLFKRNREE 167

Query: 131 LFQILNKSVSDILGQ 145
           L   + +    +LGQ
Sbjct: 168 LANKIEELKEQVLGQ 182


>Medtr7g116795.1 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr7:48250629-48252424 | 20130731
          Length = 161

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 53/79 (67%)

Query: 66  WDKPEDRLGLIGFGFAGIVALWASANLITAVDQLPVLPTVLELIGILFSVWFTYRYLLFK 125
           WD  E++  ++ +G  G+VA+W S+ L+ A++ +P+LP ++EL+G+ ++ WF YRYLLFK
Sbjct: 81  WDALENKSTVLLYGGGGLVAVWLSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFK 140

Query: 126 PDREELFQILNKSVSDILG 144
             R+EL   ++     I G
Sbjct: 141 SSRKELATDIDALKKKIAG 159


>Medtr7g118290.2 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr7:49092799-49094059 | 20130731
          Length = 159

 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 21/81 (25%)

Query: 64  NVWDKPEDRLGLIGFGFAGIVALWASANLITAVDQLPVLPTVLELIGILFSVWFTYRYLL 123
             WDK ED+  +     AG VALW SA +I+                     WF Y+ L+
Sbjct: 97  QTWDKVEDKYAVSALAVAGTVALWGSAGVIS---------------------WFAYKNLV 135

Query: 124 FKPDREELFQILNKSVSDILG 144
           FKP+RE L + +  +V DI G
Sbjct: 136 FKPEREALIRKIKGTVKDITG 156