Miyakogusa Predicted Gene

Lj0g3v0300239.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300239.1 Non Chatacterized Hit- tr|C6TF29|C6TF29_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15667 PE,88.7,0,no
description,NUDIX hydrolase domain; Dcp2 domain-like,NULL; Nudix,NUDIX
hydrolase domain-like; SUB,CUFF.20170.1
         (299 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g08170.1                                                       546   e-156
Glyma16g27200.1                                                       537   e-153
Glyma16g27200.2                                                       492   e-139
Glyma06g24450.1                                                       162   4e-40
Glyma04g17610.1                                                       100   2e-21
Glyma09g09500.1                                                        68   1e-11

>Glyma02g08170.1 
          Length = 318

 Score =  546 bits (1408), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 270/301 (89%), Positives = 275/301 (91%), Gaps = 5/301 (1%)

Query: 1   MSNHHRSTSASSKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MSNHHRS   SSKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MSNHHRS---SSKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 57

Query: 61  ENNPSLKSLNLKEFTSLLFNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYER 120
           ENNPSLKSLNLKEFTSLLFNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYER
Sbjct: 58  ENNPSLKSLNLKEFTSLLFNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYER 117

Query: 121 CLLVKGWKGTSWSFPRGKKSKDEEDHACAVREVLEETGFDVSKLLNKDEYLEVIFGQQRV 180
           CLLVKGWKG+SWSFPRGKKSKDEEDHACA+REV+EETGFDVSKLLNKDEYLEVIFGQQRV
Sbjct: 118 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVMEETGFDVSKLLNKDEYLEVIFGQQRV 177

Query: 181 RLYIIAGVNDDTAFAPLTNKEISEIAWQRLDELQPAGDEVISRGSTGLKLYMVAPFLASL 240
           RLYIIAGV DDTAFAPLT KEISEIAW RLDELQPA DEVISR  TGLKLYMVAPFLASL
Sbjct: 178 RLYIIAGVKDDTAFAPLTKKEISEIAWHRLDELQPASDEVISRSITGLKLYMVAPFLASL 237

Query: 241 KSWISTHPPPMAPRHDLPLKGICVWKAKHSSTGSSCIVMDIQPAKHEPEPVAE--GPGRS 298
           KSWISTH P MAPR DLPLKGICVWKAK  S GSS  VMDIQP K EP+      GPG+S
Sbjct: 238 KSWISTHQPAMAPRPDLPLKGICVWKAKPGSIGSSSTVMDIQPTKPEPDSHTPDLGPGKS 297

Query: 299 L 299
            
Sbjct: 298 F 298


>Glyma16g27200.1 
          Length = 318

 Score =  537 bits (1383), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/301 (88%), Positives = 273/301 (90%), Gaps = 5/301 (1%)

Query: 1   MSNHHRSTSASSKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MSNHHRS   SSKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVE AHWFYEDNSV
Sbjct: 1   MSNHHRS---SSKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVENAHWFYEDNSV 57

Query: 61  ENNPSLKSLNLKEFTSLLFNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYER 120
           ENNPSLKSLNLKEFTSLLFNSCDV +PYVAHIDDIFKDFTSYKVRVPVTGAIILDETYER
Sbjct: 58  ENNPSLKSLNLKEFTSLLFNSCDVFQPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYER 117

Query: 121 CLLVKGWKGTSWSFPRGKKSKDEEDHACAVREVLEETGFDVSKLLNKDEYLEVIFGQQRV 180
           CLLVKGWKGTSWSFPRGKKSKDEEDHAC++REV+EETGFDVSKLLNKDEYLEVIFGQQRV
Sbjct: 118 CLLVKGWKGTSWSFPRGKKSKDEEDHACSIREVMEETGFDVSKLLNKDEYLEVIFGQQRV 177

Query: 181 RLYIIAGVNDDTAFAPLTNKEISEIAWQRLDELQPAGDEVISRGSTGLKLYMVAPFLASL 240
           RLYIIAGV DDTAFAPLT KEISEIAW RLD+LQPA DEVISR  TGLKLYMVAPFLASL
Sbjct: 178 RLYIIAGVKDDTAFAPLTKKEISEIAWHRLDDLQPASDEVISRSITGLKLYMVAPFLASL 237

Query: 241 KSWISTHPPPMAPRHDLPLKGICVWKAKHSSTGSSCIVMDIQPAKHEPE--PVAEGPGRS 298
           KSWIS H P MAPR DLPLKGICVWKAK  S GSS  VMDIQP K EP+   +  GPG+S
Sbjct: 238 KSWISIHHPAMAPRPDLPLKGICVWKAKPGSIGSSSTVMDIQPTKPEPDSHTLDMGPGKS 297

Query: 299 L 299
            
Sbjct: 298 F 298


>Glyma16g27200.2 
          Length = 269

 Score =  492 bits (1267), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 241/261 (92%), Positives = 246/261 (94%), Gaps = 3/261 (1%)

Query: 1   MSNHHRSTSASSKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MSNHHRS   SSKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVE AHWFYEDNSV
Sbjct: 1   MSNHHRS---SSKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVENAHWFYEDNSV 57

Query: 61  ENNPSLKSLNLKEFTSLLFNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYER 120
           ENNPSLKSLNLKEFTSLLFNSCDV +PYVAHIDDIFKDFTSYKVRVPVTGAIILDETYER
Sbjct: 58  ENNPSLKSLNLKEFTSLLFNSCDVFQPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYER 117

Query: 121 CLLVKGWKGTSWSFPRGKKSKDEEDHACAVREVLEETGFDVSKLLNKDEYLEVIFGQQRV 180
           CLLVKGWKGTSWSFPRGKKSKDEEDHAC++REV+EETGFDVSKLLNKDEYLEVIFGQQRV
Sbjct: 118 CLLVKGWKGTSWSFPRGKKSKDEEDHACSIREVMEETGFDVSKLLNKDEYLEVIFGQQRV 177

Query: 181 RLYIIAGVNDDTAFAPLTNKEISEIAWQRLDELQPAGDEVISRGSTGLKLYMVAPFLASL 240
           RLYIIAGV DDTAFAPLT KEISEIAW RLD+LQPA DEVISR  TGLKLYMVAPFLASL
Sbjct: 178 RLYIIAGVKDDTAFAPLTKKEISEIAWHRLDDLQPASDEVISRSITGLKLYMVAPFLASL 237

Query: 241 KSWISTHPPPMAPRHDLPLKG 261
           KSWIS H P MAPR DLPLKG
Sbjct: 238 KSWISIHHPAMAPRPDLPLKG 258


>Glyma06g24450.1 
          Length = 84

 Score =  162 bits (410), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 75/84 (89%), Positives = 79/84 (94%)

Query: 120 RCLLVKGWKGTSWSFPRGKKSKDEEDHACAVREVLEETGFDVSKLLNKDEYLEVIFGQQR 179
           +CLLVKGWKG+SWSFP GKKSKDEEDHACA+REV+EETGFDVSKLLNKDEYLEVIFGQQR
Sbjct: 1   QCLLVKGWKGSSWSFPHGKKSKDEEDHACAIREVMEETGFDVSKLLNKDEYLEVIFGQQR 60

Query: 180 VRLYIIAGVNDDTAFAPLTNKEIS 203
           VR YIIAGV DDT FAPLT KEIS
Sbjct: 61  VRFYIIAGVKDDTTFAPLTKKEIS 84


>Glyma04g17610.1 
          Length = 59

 Score =  100 bits (249), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/91 (59%), Positives = 57/91 (62%), Gaps = 32/91 (35%)

Query: 79  FNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYERCLLVKGWKGTSWSFPRGK 138
           FNSCDVLKP+VAHI DIFK FTSYKVRVP+TGAIILDETYER                  
Sbjct: 1   FNSCDVLKPHVAHIGDIFKYFTSYKVRVPITGAIILDETYER------------------ 42

Query: 139 KSKDEEDHACAVREVLEETGFDVSKLLNKDE 169
                         V+EETGFDVSKLLNKDE
Sbjct: 43  --------------VMEETGFDVSKLLNKDE 59


>Glyma09g09500.1 
          Length = 162

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/78 (51%), Positives = 42/78 (53%), Gaps = 18/78 (23%)

Query: 184 IIAGVNDDTAFAPLTNKEISEIAWQRLDELQPAGDEVISRGSTGLKLYMVAPFLASLKSW 243
            I GV DDT FA LT KEIS +               +    T LKLYM      SLKSW
Sbjct: 26  FITGVKDDTTFALLTKKEISNVK--------------VQSCITSLKLYM----FQSLKSW 67

Query: 244 ISTHPPPMAPRHDLPLKG 261
           ISTH P MAPR DLPLKG
Sbjct: 68  ISTHQPSMAPRPDLPLKG 85