Miyakogusa Predicted Gene

Lj0g3v0300239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300239.1 Non Characterized Hit- tr|C6TF29|C6TF29_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15667 PE,88.7,0,no
description,NUDIX hydrolase domain; Dcp2 domain-like,NULL; Nudix,NUDIX
hydrolase domain-like; SUB,CUFF.20170.1
         (299 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g033535.1 | mRNA-decapping enzyme | HC | chr6:10873360-108...   552   e-157
Medtr6g033535.2 | mRNA-decapping enzyme | HC | chr6:10873475-108...   511   e-145

>Medtr6g033535.1 | mRNA-decapping enzyme | HC |
           chr6:10873360-10883223 | 20130731
          Length = 320

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 268/301 (89%), Positives = 279/301 (92%), Gaps = 2/301 (0%)

Query: 1   MSNHHRSTSASSKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MSNHHRS S+S K  LPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MSNHHRSPSSSYKTVLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSLNLKEFTSLLFNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYER 120
           ENNPSLKSL+LKEFTSL+FNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDET+ER
Sbjct: 61  ENNPSLKSLSLKEFTSLMFNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDETFER 120

Query: 121 CLLVKGWKGTSWSFPRGKKSKDEEDHACAVREVLEETGFDVSKLLNKDEYLEVIFGQQRV 180
           CLLVKGWKG+SWSFPRGKKSKDEEDHACAVREVLEETGFDVSK LNKDEYLEVIFGQQRV
Sbjct: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAVREVLEETGFDVSKFLNKDEYLEVIFGQQRV 180

Query: 181 RLYIIAGVNDDTAFAPLTNKEISEIAWQRLDELQPAGDEVISRGSTGLKLYMVAPFLASL 240
           RLYIIAGV DDT+FAP T KEISEIAWQRLDELQP+ DEVISRG TGLKLYMV+PFLASL
Sbjct: 181 RLYIIAGVKDDTSFAPQTKKEISEIAWQRLDELQPSSDEVISRGITGLKLYMVSPFLASL 240

Query: 241 KSWISTHPPPMAPRHDLPLKGICVWKAKHSSTGSSCIVMDIQPAKHEP--EPVAEGPGRS 298
           KSWISTH P MAPR DLPLKGICVWKAKHSSTGSS  +MD QP K EP  +P+  GPGRS
Sbjct: 241 KSWISTHQPHMAPRPDLPLKGICVWKAKHSSTGSSSTIMDSQPTKSEPDSQPIDVGPGRS 300

Query: 299 L 299
           L
Sbjct: 301 L 301


>Medtr6g033535.2 | mRNA-decapping enzyme | HC |
           chr6:10873475-10883005 | 20130731
          Length = 308

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 247/275 (89%), Positives = 257/275 (93%), Gaps = 2/275 (0%)

Query: 27  SRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSVENNPSLKSLNLKEFTSLLFNSCDVLK 86
           SRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSVENNPSLKSL+LKEFTSL+FNSCDVLK
Sbjct: 15  SRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSVENNPSLKSLSLKEFTSLMFNSCDVLK 74

Query: 87  PYVAHIDDIFKDFTSYKVRVPVTGAIILDETYERCLLVKGWKGTSWSFPRGKKSKDEEDH 146
           PYVAHIDDIFKDFTSYKVRVPVTGAIILDET+ERCLLVKGWKG+SWSFPRGKKSKDEEDH
Sbjct: 75  PYVAHIDDIFKDFTSYKVRVPVTGAIILDETFERCLLVKGWKGSSWSFPRGKKSKDEEDH 134

Query: 147 ACAVREVLEETGFDVSKLLNKDEYLEVIFGQQRVRLYIIAGVNDDTAFAPLTNKEISEIA 206
           ACAVREVLEETGFDVSK LNKDEYLEVIFGQQRVRLYIIAGV DDT+FAP T KEISEIA
Sbjct: 135 ACAVREVLEETGFDVSKFLNKDEYLEVIFGQQRVRLYIIAGVKDDTSFAPQTKKEISEIA 194

Query: 207 WQRLDELQPAGDEVISRGSTGLKLYMVAPFLASLKSWISTHPPPMAPRHDLPLKGICVWK 266
           WQRLDELQP+ DEVISRG TGLKLYMV+PFLASLKSWISTH P MAPR DLPLKGICVWK
Sbjct: 195 WQRLDELQPSSDEVISRGITGLKLYMVSPFLASLKSWISTHQPHMAPRPDLPLKGICVWK 254

Query: 267 AKHSSTGSSCIVMDIQPAKHEP--EPVAEGPGRSL 299
           AKHSSTGSS  +MD QP K EP  +P+  GPGRSL
Sbjct: 255 AKHSSTGSSSTIMDSQPTKSEPDSQPIDVGPGRSL 289