Miyakogusa Predicted Gene

Lj0g3v0300239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300239.1 Non Chatacterized Hit- tr|C6TF29|C6TF29_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15667 PE,88.7,0,no
description,NUDIX hydrolase domain; Dcp2 domain-like,NULL; Nudix,NUDIX
hydrolase domain-like; SUB,CUFF.20170.1
         (299 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13570.1 | Symbols: DCP2, TDT, ATDCP2 | decapping 2 | chr5:43...   449   e-127
AT5G13570.2 | Symbols: DCP2 | decapping 2 | chr5:4367532-4369992...   441   e-124

>AT5G13570.1 | Symbols: DCP2, TDT, ATDCP2 | decapping 2 |
           chr5:4367532-4369992 FORWARD LENGTH=373
          Length = 373

 Score =  449 bits (1156), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/289 (75%), Positives = 246/289 (85%), Gaps = 2/289 (0%)

Query: 1   MSNHHRSTSASSK--NGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDN 58
           MS  HRS+S+S    N LP +ELLDDLCSRFVLNVP+ED QSFERILFLVEYA+W+YEDN
Sbjct: 1   MSGLHRSSSSSKNIGNCLPSKELLDDLCSRFVLNVPEEDQQSFERILFLVEYAYWYYEDN 60

Query: 59  SVENNPSLKSLNLKEFTSLLFNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDETY 118
           +VEN+P LKSL+LKEFTSLLFNSCDVL+PYV HIDDIFKDFTSYK RVPVTGAIILDETY
Sbjct: 61  AVENDPKLKSLSLKEFTSLLFNSCDVLRPYVTHIDDIFKDFTSYKCRVPVTGAIILDETY 120

Query: 119 ERCLLVKGWKGTSWSFPRGKKSKDEEDHACAVREVLEETGFDVSKLLNKDEYLEVIFGQQ 178
           ERCLLVKGWKG+SWSFPRGKKSKDEEDHACA+REVLEETGFDVSKLL ++EY+E +F QQ
Sbjct: 121 ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSKLLKREEYIEFVFRQQ 180

Query: 179 RVRLYIIAGVNDDTAFAPLTNKEISEIAWQRLDELQPAGDEVISRGSTGLKLYMVAPFLA 238
           RVRLYI+AGV +DT FAPLT KEISEI W RLD LQPA +EVI+ G +GLKLYMVAPFL+
Sbjct: 181 RVRLYIVAGVTEDTVFAPLTKKEISEITWHRLDHLQPASNEVITHGVSGLKLYMVAPFLS 240

Query: 239 SLKSWISTHPPPMAPRHDLPLKGICVWKAKHSSTGSSCIVMDIQPAKHE 287
           SLKSWI  HP P+A R + PLK +CVW A+ S  G+    ++ Q  K E
Sbjct: 241 SLKSWILKHPSPVARRPNKPLKALCVWNARTSVGGNGTATVESQNRKSE 289


>AT5G13570.2 | Symbols: DCP2 | decapping 2 | chr5:4367532-4369992
           FORWARD LENGTH=386
          Length = 386

 Score =  441 bits (1134), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 217/302 (71%), Positives = 246/302 (81%), Gaps = 15/302 (4%)

Query: 1   MSNHHRSTSASSK--NGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDN 58
           MS  HRS+S+S    N LP +ELLDDLCSRFVLNVP+ED QSFERILFLVEYA+W+YEDN
Sbjct: 1   MSGLHRSSSSSKNIGNCLPSKELLDDLCSRFVLNVPEEDQQSFERILFLVEYAYWYYEDN 60

Query: 59  SVENNPSLKSLNLKEFTSLLFNSCDVLKPYVAHIDDIFKDFTSYKVRVPVTGAIILDETY 118
           +VEN+P LKSL+LKEFTSLLFNSCDVL+PYV HIDDIFKDFTSYK RVPVTGAIILDETY
Sbjct: 61  AVENDPKLKSLSLKEFTSLLFNSCDVLRPYVTHIDDIFKDFTSYKCRVPVTGAIILDETY 120

Query: 119 ERCLLVKGWKGTSWSFPRGKKSKDEEDHACAVRE-------------VLEETGFDVSKLL 165
           ERCLLVKGWKG+SWSFPRGKKSKDEEDHACA+RE             VLEETGFDVSKLL
Sbjct: 121 ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIRELSSAILLVNVAFQVLEETGFDVSKLL 180

Query: 166 NKDEYLEVIFGQQRVRLYIIAGVNDDTAFAPLTNKEISEIAWQRLDELQPAGDEVISRGS 225
            ++EY+E +F QQRVRLYI+AGV +DT FAPLT KEISEI W RLD LQPA +EVI+ G 
Sbjct: 181 KREEYIEFVFRQQRVRLYIVAGVTEDTVFAPLTKKEISEITWHRLDHLQPASNEVITHGV 240

Query: 226 TGLKLYMVAPFLASLKSWISTHPPPMAPRHDLPLKGICVWKAKHSSTGSSCIVMDIQPAK 285
           +GLKLYMVAPFL+SLKSWI  HP P+A R + PLK +CVW A+ S  G+    ++ Q  K
Sbjct: 241 SGLKLYMVAPFLSSLKSWILKHPSPVARRPNKPLKALCVWNARTSVGGNGTATVESQNRK 300

Query: 286 HE 287
            E
Sbjct: 301 SE 302