Miyakogusa Predicted Gene
- Lj0g3v0297599.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0297599.1 Non Characterized Hit- tr|D3B2U5|D3B2U5_POLPA
Putative RNA helicase OS=Polysphondylium pallidum
GN=d,24.93,4e-18,P-loop containing nucleoside triphosphate
hydrolases,NULL; DEAD,DNA/RNA helicase, DEAD/DEAH box
type,CUFF.19965.1
(556 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g050730.1 | DEAD-box helicase family protein | HC | chr1:1... 667 0.0
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 84 3e-16
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 74 5e-13
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 73 6e-13
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 72 2e-12
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 72 2e-12
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 70 8e-12
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 70 8e-12
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 65 2e-10
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 57 5e-08
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 57 5e-08
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 57 5e-08
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 57 5e-08
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 57 5e-08
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 57 5e-08
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 57 5e-08
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 57 5e-08
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 57 5e-08
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 57 5e-08
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 3e-06
>Medtr1g050730.1 | DEAD-box helicase family protein | HC |
chr1:19639763-19632815 | 20130731
Length = 532
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/511 (68%), Positives = 400/511 (78%), Gaps = 33/511 (6%)
Query: 46 LCQGMCYSLPTPEDPFNDKHGKEENKTRVPKKKPTRSPKDDTILLNGESGPGRKG-AVGR 104
+C+GMC+SLP+ +DPFND+ GK E K + PKKK T S K+ T + G+S PG KG AVGR
Sbjct: 47 ICEGMCFSLPSLDDPFNDRQGKPEFKKKDPKKK-TSSQKEKTTPVKGKSVPGEKGTAVGR 105
Query: 105 DISQKLNQQTGTGSVAANNSLGRECIINSEKKNIEVADLCGARQLGCEISEFPSKFVFWC 164
+ ANN E+ ++C Q E+S+FPSKFVFWC
Sbjct: 106 N--------------GANN-------------KSEMVEVCCGEQHDNEVSDFPSKFVFWC 138
Query: 165 LSAIENALRHGDAYTDGEGNSFFLNSWGLEFSKCYSTGKDLMDTSGTSATTEQIAWVVSA 224
LSAIENALRH DAYTDGEGNSFFLN WGLEFSK +STGKDL+DT GT ATTEQIAW+VSA
Sbjct: 139 LSAIENALRHDDAYTDGEGNSFFLNPWGLEFSKHFSTGKDLIDTGGTFATTEQIAWMVSA 198
Query: 225 AADTFVRKEKKGLSFACPFLLFLVPSHEKAVQVRTVCKPLKSVGIHTVSIHPGASLDHQI 284
AAD FVRKEK+GLS PFLLFLVPS +KA QVRTVCKPLKSVGIHTVS+HPGASLDHQI
Sbjct: 199 AADIFVRKEKQGLSLDTPFLLFLVPSEKKAGQVRTVCKPLKSVGIHTVSVHPGASLDHQI 258
Query: 285 QGLRSCEPEFLVSTPERLLELISIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFIS 344
QGL+SCEPEFL+STPERLLEL+S+KAIDISGISMLVIDG + I AGH D +KSIKKFIS
Sbjct: 259 QGLKSCEPEFLISTPERLLELVSLKAIDISGISMLVIDGFDAICKAGHADAIKSIKKFIS 318
Query: 345 GNLRMVVFNDSFNHMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQ 404
GN +VVFNDSFNH SIP+VR+LLTG ICR+S++NSI SLSSCI+QSV+VCTS+EDKLV+
Sbjct: 319 GNPSLVVFNDSFNHTSIPVVRHLLTGPICRISINNSIASLSSCIVQSVQVCTSDEDKLVK 378
Query: 405 SVEVLDQFSSSGTQNSNLLYILRKDANCHKLVKALKSKGCSIS-HSVMASSNDSVDLSNR 463
S+EVL QF SS T +SNLLYILRKD CHKLVK LKS GCS S S A+ NDSVD + R
Sbjct: 379 SIEVLRQFRSSQTHSSNLLYILRKDVKCHKLVKTLKSMGCSTSLDSDAATINDSVDSNRR 438
Query: 464 LRPAVSVIDVEHISNVDIGTYDVIVLPYFVPSLDTYVHILTKMARQSANGALHGFLKEGD 523
L V++ID+E IS +DIG YDVIVLP VPS+DTY HILT MARQS NG LHGFL + D
Sbjct: 439 L---VTMIDLEDISTLDIGMYDVIVLPSLVPSMDTYEHILTNMARQSVNGILHGFLTKSD 495
Query: 524 VEVAGPLIAILEQCGQEVPQDLQHLHNVSNM 554
E AGPLI+ILEQCGQEVP+ L+ LH SN+
Sbjct: 496 TEHAGPLISILEQCGQEVPETLKDLHQASNI 526
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 162/351 (46%), Gaps = 13/351 (3%)
Query: 202 GKDLMDTSGTSATTEQIAWVVSAAADTFVRKEKKGLSFA-CPFLLFLVPSHEKAVQVRTV 260
G+DL+ + T + + +A+ + A +++ KG S P L L P+ E A Q+ V
Sbjct: 138 GRDLIGIAAT-GSGKTLAFGIPAIMHVMNKRKSKGSSKGRNPLCLMLSPTRELAQQISDV 196
Query: 261 -CKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPERLLELISIKAIDISGISML 319
C KS G+ +V ++ G QI L+S + ++ TP R+ +L+ + + +S +
Sbjct: 197 LCDAGKSCGVESVCLYGGTPKGAQISALKSG-IDIVIGTPGRIQDLVEMGICRLQEVSFV 255
Query: 320 VIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFNHMSIPMVRYLLTGSICRLSVHN 379
V+D + + G ++SI +MV+F+ ++ + + + + ++ V +
Sbjct: 256 VLDEADRMLDMGFEQIVRSILGQTCSARQMVMFSATWPLAVHHLAQEFMDPNPVKVVVGS 315
Query: 380 SITSLSSCIIQSVKVCTSE-EDKLVQSVEVLDQFSSSGTQNSNLLYILRK--DANCHKLV 436
S + ++Q V+V DK + + +L+++ S +N L+++L K K++
Sbjct: 316 EDLSANHDVMQIVEVLDERLRDKRL--LALLEKYHKS-QKNRVLVFVLYKWETTRVEKML 372
Query: 437 KALKSKGCSIS--HSVMASSNDSVDLSNRLRPAVSVIDVEHISNVDIGTYDVIVLPYFVP 494
+ K SIS S + N P + DV +DI +V++ F
Sbjct: 373 QQGGWKAVSISGDKSQHERTKALSLFKNGSCPLMIATDVA-ARGLDIPDVEVVINFSFPL 431
Query: 495 SLDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAILEQCGQEVPQDL 545
+L+ YVH + + R G H F + +AG L+ +L + GQ VP DL
Sbjct: 432 TLEDYVHRIGRTGRAGKKGVAHTFFTHLNKGLAGELVNVLREAGQVVPDDL 482
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 157/357 (43%), Gaps = 23/357 (6%)
Query: 201 TGKDLMDTSGTSATTEQIAWVVSAAADTFVRKEKKGLSFACPFLLFLVPSHEKAVQVRTV 260
TG+DL+ + T + + +++++ A V + + + P +L L P+ E AVQ++
Sbjct: 237 TGRDLIGIAET-GSGKTLSYLLPAI--VHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQE 293
Query: 261 CKPLKS-VGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPERLLELISIKAIDISGISML 319
S I I+ GA QI+ LR E +++TP RL++++ + ++ ++ L
Sbjct: 294 AMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGV-EIVIATPGRLIDMLEAQHTNLQRVTYL 352
Query: 320 VIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFNHMSIPMVRYLLTGSICRLSVHN 379
V+D + + G ++ I I + + + ++ ++ + R L ++ + +
Sbjct: 353 VLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQFLHNPY-KVVIGS 411
Query: 380 SITSLSSCIIQSVKVCTSEE--DKLVQSV-EVLDQFSSSGTQNSNLLYILRKDANCHKLV 436
+ I Q V+V T E ++L++ + EV+D S +L C ++
Sbjct: 412 PYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMD--------GSRILIFTETKKGCDQVT 463
Query: 437 KALKSKGC---SISHSVMASSNDSV--DLSNRLRPAVSVIDVEHISNVDIGTYDVIVLPY 491
+ L+ G SI + D V + + P ++ DV +D+ +V
Sbjct: 464 RQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVA-ARGLDVKDIKCVVNYD 522
Query: 492 FVPSLDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAILEQCGQEVPQDLQHL 548
F SL+ YVH + + R A G + F + + A LI IL+ GQ V L L
Sbjct: 523 FPSSLEDYVHRIGRTGRAGAKGTAYSFFTSANAKYARDLIKILQDAGQIVSPALSAL 579
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 20/316 (6%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P +L L P+ E AVQ++ K S I + I+ G Q++ L+ E +++TP
Sbjct: 169 PIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGV-EIIIATPG 227
Query: 301 RLLELISIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFNHMS 360
RL++++ ++ ++ LV+D + + G ++ I I + + + ++ ++
Sbjct: 228 RLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEV 287
Query: 361 IPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEE--DKLVQSVE-VLDQFSSSGT 417
+ R L ++ + + + I Q V + ++ DKLV+ +E ++D
Sbjct: 288 EQLARQFLYNP-YKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMD------- 339
Query: 418 QNSNLLYILRKDANCHKLVKALKSKGC---SISHSVMASSNDSV--DLSNRLRPAVSVID 472
S +L + C ++ + L+ G SI + D V + + P ++ D
Sbjct: 340 -GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATD 398
Query: 473 VEHISNVDIGTYDVIVLPYFVPSLDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIA 532
V +D+ ++ F SL+ YVH + + R A G + F + A LI+
Sbjct: 399 VA-ARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIS 457
Query: 533 ILEQCGQEVPQDLQHL 548
ILE+ GQ V +L +
Sbjct: 458 ILEEAGQRVSSELAAM 473
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 135/319 (42%), Gaps = 26/319 (8%)
Query: 242 PFLLFLVPSHEKAVQVR-TVCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P +L L P+ E A Q++ K K+ I ++ GA Q++ + + +V+TP
Sbjct: 237 PTVLVLSPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQLKDIDRGA-DIVVATPG 295
Query: 301 RLLELISIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFNHMS 360
RL +++ ++ I + +S LV+D + + G ++ I + + ++F ++
Sbjct: 296 RLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNGVPARRQTLMFTATWPKEV 355
Query: 361 IPMVRYLLT-------GSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFS 413
+ LL G++ L + SIT Q ++V T V+ L+
Sbjct: 356 RRIAADLLVNPVQVNIGNVDELVANKSIT-------QHIEVLT-----YVEKQRRLETIL 403
Query: 414 SSGTQNSNLLYILRKDANCHKLVKALKSKGCSISHSVMASSNDSVDLSNRLR----PAVS 469
S Q S ++ C +L + L + + + S D + N+ R P +
Sbjct: 404 RSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLV 463
Query: 470 VIDVEHISNVDIGTYDVIVLPYFVPSLDTYVHILTKMARQSANGALHGFLKEGDVEVAGP 529
DV +D+ V+V F ++ YVH + + R A G + F + D + A
Sbjct: 464 ATDVA-ARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASD 522
Query: 530 LIAILEQCGQEVPQDLQHL 548
LI ILE Q VP +L+ L
Sbjct: 523 LIKILEGANQRVPPELREL 541
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 135/319 (42%), Gaps = 26/319 (8%)
Query: 242 PFLLFLVPSHEKAVQVR-TVCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P +L L P+ E A Q++ K K+ I ++ GA Q++ + + +V+TP
Sbjct: 237 PTVLVLSPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQLKDIDRGA-DIVVATPG 295
Query: 301 RLLELISIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFNHMS 360
RL +++ ++ I + +S LV+D + + G ++ I + + ++F ++
Sbjct: 296 RLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNGVPARRQTLMFTATWPKEV 355
Query: 361 IPMVRYLLT-------GSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFS 413
+ LL G++ L + SIT Q ++V T V+ L+
Sbjct: 356 RRIAADLLVNPVQVNIGNVDELVANKSIT-------QHIEVLT-----YVEKQRRLETIL 403
Query: 414 SSGTQNSNLLYILRKDANCHKLVKALKSKGCSISHSVMASSNDSVDLSNRLR----PAVS 469
S Q S ++ C +L + L + + + S D + N+ R P +
Sbjct: 404 RSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLV 463
Query: 470 VIDVEHISNVDIGTYDVIVLPYFVPSLDTYVHILTKMARQSANGALHGFLKEGDVEVAGP 529
DV +D+ V+V F ++ YVH + + R A G + F + D + A
Sbjct: 464 ATDVA-ARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASD 522
Query: 530 LIAILEQCGQEVPQDLQHL 548
LI ILE Q VP +L+ L
Sbjct: 523 LIKILEGANQRVPPELREL 541
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 144/330 (43%), Gaps = 28/330 (8%)
Query: 232 KEKKGLSFACPFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSC 290
++++ S P +L L P+ E A Q++ V K +S + ++ GA Q++ L
Sbjct: 558 RQRRNNSLNGPTVLVLAPTRELATQIQEEVFKFARSSRVSCTCLYGGAPKALQLKELDRG 617
Query: 291 EPEFLVSTPERLLELISIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMV 350
+ +V+TP RL +++ +K ID +S+LV+D + + G ++ I I + +
Sbjct: 618 A-DIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTL 676
Query: 351 VFNDSFNHMSIPMVRYLLT-------GSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLV 403
++ ++ + LL G++ L+ + SIT Q V+V E +
Sbjct: 677 MYTATWPKEVRKIAGDLLVNPVQVNIGNVDELAANKSIT-------QYVEVVPQMEKQ-- 727
Query: 404 QSVEVLDQFSSSGTQNSNLLYILRKDANCHKLVKAL-KSKGCSISHSVMASSNDSVDLSN 462
L+Q S + S ++ C +L +++ ++ G + H + L
Sbjct: 728 ---RRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFGAAAIHGDKSQGERDWVLG- 783
Query: 463 RLR----PAVSVIDVEHISNVDIGTYDVIVLPYFVPSLDTYVHILTKMARQSANGALHGF 518
+ R P + DV +DI V++ F ++ YVH + + R A G + F
Sbjct: 784 QFRTGKSPILVATDVA-ARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTF 842
Query: 519 LKEGDVEVAGPLIAILEQCGQEVPQDLQHL 548
E D + AG LI +LE Q V +L+ +
Sbjct: 843 FSEQDWKHAGDLIKVLEGANQHVLPELRQI 872
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 144/330 (43%), Gaps = 28/330 (8%)
Query: 232 KEKKGLSFACPFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSC 290
++++ S P +L L P+ E A Q++ V K +S + ++ GA Q++ L
Sbjct: 558 RQRRNNSLNGPTVLVLAPTRELATQIQEEVFKFARSSRVSCTCLYGGAPKALQLKELDRG 617
Query: 291 EPEFLVSTPERLLELISIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMV 350
+ +V+TP RL +++ +K ID +S+LV+D + + G ++ I I + +
Sbjct: 618 A-DIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTL 676
Query: 351 VFNDSFNHMSIPMVRYLLT-------GSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLV 403
++ ++ + LL G++ L+ + SIT Q V+V E +
Sbjct: 677 MYTATWPKEVRKIAGDLLVNPVQVNIGNVDELAANKSIT-------QYVEVVPQMEKQ-- 727
Query: 404 QSVEVLDQFSSSGTQNSNLLYILRKDANCHKLVKAL-KSKGCSISHSVMASSNDSVDLSN 462
L+Q S + S ++ C +L +++ ++ G + H + L
Sbjct: 728 ---RRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFGAAAIHGDKSQGERDWVLG- 783
Query: 463 RLR----PAVSVIDVEHISNVDIGTYDVIVLPYFVPSLDTYVHILTKMARQSANGALHGF 518
+ R P + DV +DI V++ F ++ YVH + + R A G + F
Sbjct: 784 QFRTGKSPILVATDVA-ARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTF 842
Query: 519 LKEGDVEVAGPLIAILEQCGQEVPQDLQHL 548
E D + AG LI +LE Q V +L+ +
Sbjct: 843 FSEQDWKHAGDLIKVLEGANQHVLPELRQI 872
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 144/315 (45%), Gaps = 17/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRTVCKPL-KSVGIHTVSIHPGASLDHQIQGLRS-CEPEFLVSTP 299
P + P+ E A Q+ K K+ GI +++ G S Q + L++ CE +V+TP
Sbjct: 305 PIGVICAPTRELAHQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCE--IVVATP 362
Query: 300 ERLLELISIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFNHM 359
RL++++ +KA+ + + LV+D + ++ G ++SI I + + ++F+ +
Sbjct: 363 GRLIDMLKMKALAMLRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRK 422
Query: 360 SIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGTQN 419
+ R +L+ I R++V + + I Q V+V S+ +KL +E L + G
Sbjct: 423 VEKLAREILSDPI-RVTV-GEVGMANEDITQVVQVIPSDSEKLPWLLEKLHEMIDQG--- 477
Query: 420 SNLLYILRKDANCHKLVKALKSKGCSIS--HSVMASSNDSVDLSNRLRP-AVSVIDVEHI 476
+ L K A ++ L +G ++ H S+ +D+ + + A V+ +
Sbjct: 478 -DTLVFASKKATVDEIEVQLGQRGFKVAALHGDKDQSS-RMDILQKFKSGAYHVLIATDV 535
Query: 477 S--NVDIGTYDVIVLPYFVPSLDTYVHILTKMARQ-SANGALHGFLKEGDVEVAGPLIAI 533
+ +DI + +V +D +VH + + R +G + + + + AG L+
Sbjct: 536 AARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNS 595
Query: 534 LEQCGQEVPQDLQHL 548
L GQ V +L L
Sbjct: 596 LVAAGQNVSTELMDL 610
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P L + P+ E Q+ + + K K +GI V ++ G+ + QI L+ E +V TP
Sbjct: 577 PIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPG 635
Query: 301 RLLELI---SIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFN 357
R+++++ S K ++ ++ LV+D + ++ G + I + I + + V+F+ +F
Sbjct: 636 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 695
Query: 358 HMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGT 417
+ R +L + S+ ++ I Q V+V E L + + +
Sbjct: 696 RQVEILARKVLNKPVEIQVGGRSV--VNKDIAQLVEVRPENERFLRLLELLGEWY----- 748
Query: 418 QNSNLLYILRKDANCHKLVKALKSKG--CSISHSVMASSNDSVDLSNRLRPAVSVIDVEH 475
+ +L + C L K L G C H ++ +S+ +++
Sbjct: 749 EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATS 808
Query: 476 ISNVDIGTYDV-IVLPYFVPS-LDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAI 533
I+ + ++ +V+ + VP+ + YVH + + R G F+ E D A L+
Sbjct: 809 IAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 868
Query: 534 LEQCGQEVPQDLQHL 548
LE Q VP DL+ L
Sbjct: 869 LELSEQIVPDDLKSL 883
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P L + P+ E Q+ + + K K +GI V ++ G+ + QI L+ E +V TP
Sbjct: 577 PIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPG 635
Query: 301 RLLELI---SIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFN 357
R+++++ S K ++ ++ LV+D + ++ G + I + I + + V+F+ +F
Sbjct: 636 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 695
Query: 358 HMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGT 417
+ R +L + S+ ++ I Q V+V E L + + +
Sbjct: 696 RQVEILARKVLNKPVEIQVGGRSV--VNKDIAQLVEVRPENERFLRLLELLGEWY----- 748
Query: 418 QNSNLLYILRKDANCHKLVKALKSKG--CSISHSVMASSNDSVDLSNRLRPAVSVIDVEH 475
+ +L + C L K L G C H ++ +S+ +++
Sbjct: 749 EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATS 808
Query: 476 ISNVDIGTYDV-IVLPYFVPS-LDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAI 533
I+ + ++ +V+ + VP+ + YVH + + R G F+ E D A L+
Sbjct: 809 IAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 868
Query: 534 LEQCGQEVPQDLQHL 548
LE Q VP DL+ L
Sbjct: 869 LELSEQIVPDDLKSL 883
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P L + P+ E Q+ + + K K +GI V ++ G+ + QI L+ E +V TP
Sbjct: 577 PIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPG 635
Query: 301 RLLELI---SIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFN 357
R+++++ S K ++ ++ LV+D + ++ G + I + I + + V+F+ +F
Sbjct: 636 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 695
Query: 358 HMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGT 417
+ R +L + S+ ++ I Q V+V E L + + +
Sbjct: 696 RQVEILARKVLNKPVEIQVGGRSV--VNKDIAQLVEVRPENERFLRLLELLGEWY----- 748
Query: 418 QNSNLLYILRKDANCHKLVKALKSKG--CSISHSVMASSNDSVDLSNRLRPAVSVIDVEH 475
+ +L + C L K L G C H ++ +S+ +++
Sbjct: 749 EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATS 808
Query: 476 ISNVDIGTYDV-IVLPYFVPS-LDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAI 533
I+ + ++ +V+ + VP+ + YVH + + R G F+ E D A L+
Sbjct: 809 IAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 868
Query: 534 LEQCGQEVPQDLQHL 548
LE Q VP DL+ L
Sbjct: 869 LELSEQIVPDDLKSL 883
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P L + P+ E Q+ + + K K +GI V ++ G+ + QI L+ E +V TP
Sbjct: 577 PIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPG 635
Query: 301 RLLELI---SIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFN 357
R+++++ S K ++ ++ LV+D + ++ G + I + I + + V+F+ +F
Sbjct: 636 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 695
Query: 358 HMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGT 417
+ R +L + S+ ++ I Q V+V E L + + +
Sbjct: 696 RQVEILARKVLNKPVEIQVGGRSV--VNKDIAQLVEVRPENERFLRLLELLGEWY----- 748
Query: 418 QNSNLLYILRKDANCHKLVKALKSKG--CSISHSVMASSNDSVDLSNRLRPAVSVIDVEH 475
+ +L + C L K L G C H ++ +S+ +++
Sbjct: 749 EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATS 808
Query: 476 ISNVDIGTYDV-IVLPYFVPS-LDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAI 533
I+ + ++ +V+ + VP+ + YVH + + R G F+ E D A L+
Sbjct: 809 IAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 868
Query: 534 LEQCGQEVPQDLQHL 548
LE Q VP DL+ L
Sbjct: 869 LELSEQIVPDDLKSL 883
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P L + P+ E Q+ + + K K +GI V ++ G+ + QI L+ E +V TP
Sbjct: 577 PIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPG 635
Query: 301 RLLELI---SIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFN 357
R+++++ S K ++ ++ LV+D + ++ G + I + I + + V+F+ +F
Sbjct: 636 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 695
Query: 358 HMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGT 417
+ R +L + S+ ++ I Q V+V E L + + +
Sbjct: 696 RQVEILARKVLNKPVEIQVGGRSV--VNKDIAQLVEVRPENERFLRLLELLGEWY----- 748
Query: 418 QNSNLLYILRKDANCHKLVKALKSKG--CSISHSVMASSNDSVDLSNRLRPAVSVIDVEH 475
+ +L + C L K L G C H ++ +S+ +++
Sbjct: 749 EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATS 808
Query: 476 ISNVDIGTYDV-IVLPYFVPS-LDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAI 533
I+ + ++ +V+ + VP+ + YVH + + R G F+ E D A L+
Sbjct: 809 IAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 868
Query: 534 LEQCGQEVPQDLQHL 548
LE Q VP DL+ L
Sbjct: 869 LELSEQIVPDDLKSL 883
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P L + P+ E Q+ + + K K +GI V ++ G+ + QI L+ E +V TP
Sbjct: 577 PIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPG 635
Query: 301 RLLELI---SIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFN 357
R+++++ S K ++ ++ LV+D + ++ G + I + I + + V+F+ +F
Sbjct: 636 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 695
Query: 358 HMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGT 417
+ R +L + S+ ++ I Q V+V E L + + +
Sbjct: 696 RQVEILARKVLNKPVEIQVGGRSV--VNKDIAQLVEVRPENERFLRLLELLGEWY----- 748
Query: 418 QNSNLLYILRKDANCHKLVKALKSKG--CSISHSVMASSNDSVDLSNRLRPAVSVIDVEH 475
+ +L + C L K L G C H ++ +S+ +++
Sbjct: 749 EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATS 808
Query: 476 ISNVDIGTYDV-IVLPYFVPS-LDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAI 533
I+ + ++ +V+ + VP+ + YVH + + R G F+ E D A L+
Sbjct: 809 IAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 868
Query: 534 LEQCGQEVPQDLQHL 548
LE Q VP DL+ L
Sbjct: 869 LELSEQIVPDDLKSL 883
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P L + P+ E Q+ + + K K +GI V ++ G+ + QI L+ E +V TP
Sbjct: 577 PIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPG 635
Query: 301 RLLELI---SIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFN 357
R+++++ S K ++ ++ LV+D + ++ G + I + I + + V+F+ +F
Sbjct: 636 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 695
Query: 358 HMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGT 417
+ R +L + S+ ++ I Q V+V E L + + +
Sbjct: 696 RQVEILARKVLNKPVEIQVGGRSV--VNKDIAQLVEVRPENERFLRLLELLGEWY----- 748
Query: 418 QNSNLLYILRKDANCHKLVKALKSKG--CSISHSVMASSNDSVDLSNRLRPAVSVIDVEH 475
+ +L + C L K L G C H ++ +S+ +++
Sbjct: 749 EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATS 808
Query: 476 ISNVDIGTYDV-IVLPYFVPS-LDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAI 533
I+ + ++ +V+ + VP+ + YVH + + R G F+ E D A L+
Sbjct: 809 IAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 868
Query: 534 LEQCGQEVPQDLQHL 548
LE Q VP DL+ L
Sbjct: 869 LELSEQIVPDDLKSL 883
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P L + P+ E Q+ + + K K +GI V ++ G+ + QI L+ E +V TP
Sbjct: 577 PIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPG 635
Query: 301 RLLELI---SIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFN 357
R+++++ S K ++ ++ LV+D + ++ G + I + I + + V+F+ +F
Sbjct: 636 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 695
Query: 358 HMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGT 417
+ R +L + S+ ++ I Q V+V E L + + +
Sbjct: 696 RQVEILARKVLNKPVEIQVGGRSV--VNKDIAQLVEVRPENERFLRLLELLGEWY----- 748
Query: 418 QNSNLLYILRKDANCHKLVKALKSKG--CSISHSVMASSNDSVDLSNRLRPAVSVIDVEH 475
+ +L + C L K L G C H ++ +S+ +++
Sbjct: 749 EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATS 808
Query: 476 ISNVDIGTYDV-IVLPYFVPS-LDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAI 533
I+ + ++ +V+ + VP+ + YVH + + R G F+ E D A L+
Sbjct: 809 IAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 868
Query: 534 LEQCGQEVPQDLQHL 548
LE Q VP DL+ L
Sbjct: 869 LELSEQIVPDDLKSL 883
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P L + P+ E Q+ + + K K +GI V ++ G+ + QI L+ E +V TP
Sbjct: 577 PIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPG 635
Query: 301 RLLELI---SIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFN 357
R+++++ S K ++ ++ LV+D + ++ G + I + I + + V+F+ +F
Sbjct: 636 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 695
Query: 358 HMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGT 417
+ R +L + S+ ++ I Q V+V E L + + +
Sbjct: 696 RQVEILARKVLNKPVEIQVGGRSV--VNKDIAQLVEVRPENERFLRLLELLGEWY----- 748
Query: 418 QNSNLLYILRKDANCHKLVKALKSKG--CSISHSVMASSNDSVDLSNRLRPAVSVIDVEH 475
+ +L + C L K L G C H ++ +S+ +++
Sbjct: 749 EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATS 808
Query: 476 ISNVDIGTYDV-IVLPYFVPS-LDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAI 533
I+ + ++ +V+ + VP+ + YVH + + R G F+ E D A L+
Sbjct: 809 IAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 868
Query: 534 LEQCGQEVPQDLQHL 548
LE Q VP DL+ L
Sbjct: 869 LELSEQIVPDDLKSL 883
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 242 PFLLFLVPSHEKAVQVRT-VCKPLKSVGIHTVSIHPGASLDHQIQGLRSCEPEFLVSTPE 300
P L + P+ E Q+ + + K K +GI V ++ G+ + QI L+ E +V TP
Sbjct: 577 PIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPG 635
Query: 301 RLLELI---SIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSFN 357
R+++++ S K ++ ++ LV+D + ++ G + I + I + + V+F+ +F
Sbjct: 636 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 695
Query: 358 HMSIPMVRYLLTGSICRLSVHNSITSLSSCIIQSVKVCTSEEDKLVQSVEVLDQFSSSGT 417
+ R +L + S+ ++ I Q V+V E L + + +
Sbjct: 696 RQVEILARKVLNKPVEIQVGGRSV--VNKDIAQLVEVRPENERFLRLLELLGEWY----- 748
Query: 418 QNSNLLYILRKDANCHKLVKALKSKG--CSISHSVMASSNDSVDLSNRLRPAVSVIDVEH 475
+ +L + C L K L G C H ++ +S+ +++
Sbjct: 749 EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATS 808
Query: 476 ISNVDIGTYDV-IVLPYFVPS-LDTYVHILTKMARQSANGALHGFLKEGDVEVAGPLIAI 533
I+ + ++ +V+ + VP+ + YVH + + R G F+ E D A L+
Sbjct: 809 IAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 868
Query: 534 LEQCGQEVPQDLQHL 548
LE Q VP DL+ L
Sbjct: 869 LELSEQIVPDDLKSL 883
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 244 LLFLVPSHEKAVQVRTVCKPL-KSVGIHTVSIHPGASLDHQIQGLRSCEP-EFLVSTPER 301
++ LVP+ E A+Q VCK L K + I + G SL I +R +P LV TP R
Sbjct: 220 VVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDI--MRLYQPVHLLVGTPGR 277
Query: 302 LLELISIKAIDISGISMLVIDGLNTIYSAGHTDTLKSIKKFISGNLRMVVFNDSF 356
+L+L + SMLV+D + + S +++ + +F+ N ++++F+ +F
Sbjct: 278 ILDLAKKGVCVLKDCSMLVMDEADKLLSPEFKPSIEQLIQFLPSNRQILLFSATF 332