Miyakogusa Predicted Gene
- Lj0g3v0297599.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0297599.1 Non Chatacterized Hit- tr|D3B2U5|D3B2U5_POLPA
Putative RNA helicase OS=Polysphondylium pallidum
GN=d,24.93,4e-18,P-loop containing nucleoside triphosphate
hydrolases,NULL; DEAD,DNA/RNA helicase, DEAD/DEAH box
type,CUFF.19965.1
(1674 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS338131 similar to UniRef100_A7QBI1 Cluster: Chromosom... 1253 0.0
gnl|LJGI|TC63593 809 0.0
>gnl|LJGI|FS338131 similar to UniRef100_A7QBI1 Cluster: Chromosome chr13 scaffold_74,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_74, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 716
Score = 1253 bits (632), Expect = 0.0
Identities = 632/632 (100%)
Strand = Plus / Plus
Query: 59 gtgactctaactctctatcttcaaaggctgcggccgctgtcgccgccaagaaacgccgta 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gtgactctaactctctatcttcaaaggctgcggccgctgtcgccgccaagaaacgccgta 144
Query: 119 aggccggaaaacgacgcctttgccaggggatgtgctatagcctacctactccagaggatc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 aggccggaaaacgacgcctttgccaggggatgtgctatagcctacctactccagaggatc 204
Query: 179 cattcaacgataaacatgggaaagaggaaaacaaaacaagggttcctaaaaagaaaccaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cattcaacgataaacatgggaaagaggaaaacaaaacaagggttcctaaaaagaaaccaa 264
Query: 239 cgcgttccccaaaagatgatacaattctccttaatggggagagtggaccaggaaggaaag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgcgttccccaaaagatgatacaattctccttaatggggagagtggaccaggaaggaaag 324
Query: 299 gcgctgttggtcgggatatttcacaaaaattgaatcaacaaacaggaactggatctgttg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcgctgttggtcgggatatttcacaaaaattgaatcaacaaacaggaactggatctgttg 384
Query: 359 ctgccaacaatagtctgggccgcgaatgtattatcaactcagagaagaagaatattgagg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgccaacaatagtctgggccgcgaatgtattatcaactcagagaagaagaatattgagg 444
Query: 419 tggctgacctttgcggtgcccgacaacttggttgtgaaatttcagagttcccttcaaaat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggctgacctttgcggtgcccgacaacttggttgtgaaatttcagagttcccttcaaaat 504
Query: 479 ttgttttttggtgtctaagtgcaattgaaaatgcactacgacatggtgatgcgtacacgg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgttttttggtgtctaagtgcaattgaaaatgcactacgacatggtgatgcgtacacgg 564
Query: 539 atggagagggtaattctttctttcttaattcatggggattggaattttccaagtgttatt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atggagagggtaattctttctttcttaattcatggggattggaattttccaagtgttatt 624
Query: 599 ctacagggaaagacctgatggacactagtggaacctctgctactactgagcaaattgcat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctacagggaaagacctgatggacactagtggaacctctgctactactgagcaaattgcat 684
Query: 659 gggtagtttctgcggcagctgatacttttgtg 690
||||||||||||||||||||||||||||||||
Sbjct: 685 gggtagtttctgcggcagctgatacttttgtg 716
>gnl|LJGI|TC63593
Length = 711
Score = 809 bits (408), Expect = 0.0
Identities = 411/412 (99%)
Strand = Plus / Plus
Query: 1263 cctactatatattttgaggaaagatgctaactgccataaattggtcaaggctctcaaatc 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cctactatatattttgaggaaagatgctaactgccataaattggtcaaggctctcaaatc 62
Query: 1323 caagggctgttccatttcacattctgttatggcaagttcaaacgatagtgtggatttaag 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 caagggctgttccatttcacattctgttatggcaagttcaaacgatagtgtggatttaag 122
Query: 1383 caacagattacgaccagcggtttctgtgattgatgtggagcatatctctaatgtggatat 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 caacagattacgaccagcggtttctgtgattgatgtggagcatatctctaatgtggatat 182
Query: 1443 agggacctatgatgtgattgtgctaccttattttgtaccttctttggacacttacgtgca 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agggacctatgatgtgattgtgctaccttattttgtaccttctttggacacttacgtgca 242
Query: 1503 tattttgacaaagatggcccgccaaagtgccaatggtgctttgcatggtttcttaaaaga 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tattttgacaaagatggcccgccaaagtgccaatggtgctttgcatggtttcttaaaaga 302
Query: 1563 aggagatgttgaagttgctggaccactcattgcgattcttgaacaatgcgggcaggaagt 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 303 aggagatgttgaagttgctggaccactcattgcgattcttgaacaatgcgggcaggaggt 362
Query: 1623 gcctcaagacctgcagcatctgcataatgtatcaaacatggtttcttagtca 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gcctcaagacctgcagcatctgcataatgtatcaaacatggtttcttagtca 414