Miyakogusa Predicted Gene

Lj0g3v0296119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0296119.1 Non Chatacterized Hit- tr|I1MPJ4|I1MPJ4_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,92.06,0,Class II aaRS
and biotin synthetases,NULL; Class II aaRS
ABD-related,Anticodon-binding; AA_TRNA_LIGA,CUFF.19843.1
         (502 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G52520.1 | Symbols: OVA6, PRORS1 | Class II aaRS and biotin s...   810   0.0  
AT3G62120.2 | Symbols:  | Class II aaRS and biotin synthetases s...   375   e-104
AT3G62120.1 | Symbols:  | Class II aaRS and biotin synthetases s...   375   e-104
AT5G10880.1 | Symbols:  | tRNA synthetase-related / tRNA ligase-...   110   2e-24

>AT5G52520.1 | Symbols: OVA6, PRORS1 | Class II aaRS and biotin
           synthetases superfamily protein | chr5:21311112-21313875
           FORWARD LENGTH=543
          Length = 543

 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/439 (87%), Positives = 418/439 (95%)

Query: 64  DRVITPRSQDFNAWYLDIIANAELADYGPVRGTMVIRPYGYAIWESIQDFLNVKFKETGH 123
           DR +TPRSQDFNAWYLD+IA+AELADYGPVRGTMVIRPYGYAIWE+IQD+LNVKFKETGH
Sbjct: 63  DRAVTPRSQDFNAWYLDVIASAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGH 122

Query: 124 SNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQW 183
           SNMYFPQFIPYSFIEKEASHVEGFSPELALVT+GGGKELEEKLVVRPTSETIVNHMFTQW
Sbjct: 123 SNMYFPQFIPYSFIEKEASHVEGFSPELALVTVGGGKELEEKLVVRPTSETIVNHMFTQW 182

Query: 184 IHSYRDLPLMINQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAENEAIQMIDIYT 243
           IHSYRDLPLMINQWANVTRWEMRTKPF+RTLEFLWQEGHTAHATPEEAE EA QMI+IYT
Sbjct: 183 IHSYRDLPLMINQWANVTRWEMRTKPFIRTLEFLWQEGHTAHATPEEAEKEAKQMIEIYT 242

Query: 244 KFAYEQTAIPVIPGRKSKVETFAGACKTYTIEAMMGDKKALQAGTSHNLGQNFARAFGTL 303
           +FA+EQTAIPVIPGRKSK+ETFAGA  TYTIEAMMGD+KALQAGTSHNLGQNF+RAFGT 
Sbjct: 243 RFAFEQTAIPVIPGRKSKLETFAGADITYTIEAMMGDRKALQAGTSHNLGQNFSRAFGTQ 302

Query: 304 FTDENGQREYVWQTSWAISTRFVGGIIMTHGDDIGLMLPPKIAPIQVVIVPIWKKDGEKE 363
           F DENG+R++VWQTSWA+STRFVGGIIMTHGDD GLMLPPKIAPIQVVIVPIWKKD EK 
Sbjct: 303 FADENGERQHVWQTSWAVSTRFVGGIIMTHGDDTGLMLPPKIAPIQVVIVPIWKKDTEKT 362

Query: 364 AVLNAAASLKEVLHSSGIRVKLDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVI 423
            VL+AA+S+KE L ++G+RVKLDD+DQRTPGWKFNFWEMKG+PLRIEIGPRDVSS SVV+
Sbjct: 363 GVLSAASSVKEALQTAGVRVKLDDTDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSNSVVV 422

Query: 424 SRRDIPGKQGKVFGISMEPSILEAYVKDKLDEIQSSLLERAIAFRDSNIVDVSTYDDLKA 483
           SRRD+PGK GKVFGISMEPS L AYVK+KLDEIQ+SLLE+A++FRDSNIVDV++Y +LK 
Sbjct: 423 SRRDVPGKAGKVFGISMEPSTLVAYVKEKLDEIQTSLLEKALSFRDSNIVDVNSYAELKD 482

Query: 484 AISQGKWARGPWSASDEDE 502
           AIS GKWARGPWSASD DE
Sbjct: 483 AISSGKWARGPWSASDADE 501


>AT3G62120.2 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr3:23001227-23003849 REVERSE
           LENGTH=530
          Length = 530

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/435 (42%), Positives = 275/435 (63%), Gaps = 9/435 (2%)

Query: 70  RSQDFNAWYLDIIANAELADYGPVRGTMVIRPYGYAIWESIQDFLNVKFKETGHSNMYFP 129
           + ++F  WY ++    ++ +Y  + G  ++RP+  AIWE +Q F + + K+    N YFP
Sbjct: 54  KDENFGEWYSEV-CKQDMIEYYDISGCYILRPWSMAIWEIMQIFFDAEIKKMKVKNCYFP 112

Query: 130 QFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHSYRD 189
            F+    +EKE  H+EGF+PE+A VT  G  +LE  + +RPTSET++   +++WI  +RD
Sbjct: 113 LFVSPGVLEKEKDHIEGFAPEVAWVTKSGKSDLEVPIAIRPTSETVMYPYYSKWIRGHRD 172

Query: 190 LPLMINQWANVTRWEMRT-KPFVRTLEFLWQEGHTAHATPEEAENEAIQMIDIYTKFAYE 248
           LPL +NQW NV RWE     PF+R+ EFLWQEGHTA AT  EA+ E +Q++++Y +   E
Sbjct: 173 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKAEADEEVLQILELYRRIYEE 232

Query: 249 QTAIPVIPGRKSKVETFAGACKTYTIEAMMGDK-KALQAGTSHNLGQNFARAFGTLFTDE 307
             A+PV+ G KS+ E FAG   T ++EA + +  + +Q  TSH LGQNFA+ F   F +E
Sbjct: 233 YLAVPVVKGMKSENEKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFAKMFEINFENE 292

Query: 308 NGQREYVWQTSWAISTRFVGGIIMTHGDDIGLMLPPKIAPIQVVIVPIWKKDGEKEAVLN 367
             + E VWQ SWA STR +G +IMTHGDD GL+LPPK+A +QVV++P+  KD   + + +
Sbjct: 293 KAETEMVWQNSWAYSTRTIGVMIMTHGDDKGLVLPPKVASVQVVVIPVPYKDANTQGIYD 352

Query: 368 AAASLKEVLHSSGIRVKLDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRD 427
           A  +    L  +GIR + D  D  +PGWK++ WEMKGVPLRIEIGPRD+ +  V   RRD
Sbjct: 353 ACTATASALCEAGIRAEEDLRDNYSPGWKYSDWEMKGVPLRIEIGPRDLENDQVRTVRRD 412

Query: 428 IPGKQGKVFGISMEPSILEAYVKDKLDEIQSSLLERAIAFRDSNIVDVSTYDDLKAAISQ 487
              K+    G     S++E +VK+ L++IQ ++ E A   R++ + +V T+D+   A+++
Sbjct: 413 NGVKEDIPRG-----SLVE-HVKELLEKIQQNMYEVAKQKREACVQEVKTWDEFIKALNE 466

Query: 488 GKWARGPWSASDEDE 502
            K    PW   +E E
Sbjct: 467 KKLILAPWCDEEEVE 481


>AT3G62120.1 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr3:23001227-23003849 REVERSE
           LENGTH=530
          Length = 530

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/435 (42%), Positives = 275/435 (63%), Gaps = 9/435 (2%)

Query: 70  RSQDFNAWYLDIIANAELADYGPVRGTMVIRPYGYAIWESIQDFLNVKFKETGHSNMYFP 129
           + ++F  WY ++    ++ +Y  + G  ++RP+  AIWE +Q F + + K+    N YFP
Sbjct: 54  KDENFGEWYSEV-CKQDMIEYYDISGCYILRPWSMAIWEIMQIFFDAEIKKMKVKNCYFP 112

Query: 130 QFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHSYRD 189
            F+    +EKE  H+EGF+PE+A VT  G  +LE  + +RPTSET++   +++WI  +RD
Sbjct: 113 LFVSPGVLEKEKDHIEGFAPEVAWVTKSGKSDLEVPIAIRPTSETVMYPYYSKWIRGHRD 172

Query: 190 LPLMINQWANVTRWEMRT-KPFVRTLEFLWQEGHTAHATPEEAENEAIQMIDIYTKFAYE 248
           LPL +NQW NV RWE     PF+R+ EFLWQEGHTA AT  EA+ E +Q++++Y +   E
Sbjct: 173 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKAEADEEVLQILELYRRIYEE 232

Query: 249 QTAIPVIPGRKSKVETFAGACKTYTIEAMMGDK-KALQAGTSHNLGQNFARAFGTLFTDE 307
             A+PV+ G KS+ E FAG   T ++EA + +  + +Q  TSH LGQNFA+ F   F +E
Sbjct: 233 YLAVPVVKGMKSENEKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFAKMFEINFENE 292

Query: 308 NGQREYVWQTSWAISTRFVGGIIMTHGDDIGLMLPPKIAPIQVVIVPIWKKDGEKEAVLN 367
             + E VWQ SWA STR +G +IMTHGDD GL+LPPK+A +QVV++P+  KD   + + +
Sbjct: 293 KAETEMVWQNSWAYSTRTIGVMIMTHGDDKGLVLPPKVASVQVVVIPVPYKDANTQGIYD 352

Query: 368 AAASLKEVLHSSGIRVKLDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRD 427
           A  +    L  +GIR + D  D  +PGWK++ WEMKGVPLRIEIGPRD+ +  V   RRD
Sbjct: 353 ACTATASALCEAGIRAEEDLRDNYSPGWKYSDWEMKGVPLRIEIGPRDLENDQVRTVRRD 412

Query: 428 IPGKQGKVFGISMEPSILEAYVKDKLDEIQSSLLERAIAFRDSNIVDVSTYDDLKAAISQ 487
              K+    G     S++E +VK+ L++IQ ++ E A   R++ + +V T+D+   A+++
Sbjct: 413 NGVKEDIPRG-----SLVE-HVKELLEKIQQNMYEVAKQKREACVQEVKTWDEFIKALNE 466

Query: 488 GKWARGPWSASDEDE 502
            K    PW   +E E
Sbjct: 467 KKLILAPWCDEEEVE 481


>AT5G10880.1 | Symbols:  | tRNA synthetase-related / tRNA
           ligase-related | chr5:3432693-3433867 FORWARD LENGTH=309
          Length = 309

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 95/169 (56%), Gaps = 9/169 (5%)

Query: 330 IMTHGDDIGLMLPPKIAPIQVVI--VPIWKKDGEKEAVLNAAASLKEVLHSSGIRVKLDD 387
            MTHGDD GL+ PPK+AP+QVV+  VPI K   + + + +A  +++  L  +GIR + D 
Sbjct: 88  CMTHGDDKGLVFPPKVAPVQVVVIHVPI-KGAADYQELCDACEAVESTLLGAGIRAEADI 146

Query: 388 SDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRDIPGKQGKVFGISMEPSILEA 447
            D  + GWK+   E+ GVPLRIE GPRD+++  V I  RD   K     G  +E      
Sbjct: 147 RDNYSCGWKYADQELTGVPLRIETGPRDLANDQVRIVTRDNGAKMDVKRGDLIE------ 200

Query: 448 YVKDKLDEIQSSLLERAIAFRDSNIVDVSTYDDLKAAISQGKWARGPWS 496
            VKD L++IQS+L + A    +     V T+D+   A+SQ K    PW 
Sbjct: 201 QVKDLLEKIQSNLYDVAKRKVEECTQKVETWDEFVEALSQKKLILAPWC 249