Miyakogusa Predicted Gene
- Lj0g3v0296119.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0296119.1 Non Chatacterized Hit- tr|I1MPJ4|I1MPJ4_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,92.06,0,Class II aaRS
and biotin synthetases,NULL; Class II aaRS
ABD-related,Anticodon-binding; AA_TRNA_LIGA,CUFF.19843.1
(1506 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS335606 homologue to UniRef100_A7QG53 Cluster: Chromos... 1257 0.0
gnl|LJGI|TC61277 similar to UniRef100_Q7XZD2 Cluster: Prolyl-tRN... 743 0.0
gnl|LJGI|TC66230 similar to UniRef100_A7Q0Z4 Cluster: Chromosome... 54 3e-06
>gnl|LJGI|FS335606 homologue to UniRef100_A7QG53 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (29%)
Length = 696
Score = 1257 bits (634), Expect = 0.0
Identities = 663/675 (98%), Gaps = 12/675 (1%)
Strand = Plus / Plus
Query: 1 atggcgtctctgaagctatgctcttttacccacctcttctcctctccctcttccgccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atggcgtctctgaagctatgctcttttacccacctcttctcctctccctcttccgccacc 81
Query: 61 attcctcgtcgttctc------------ggcggcgcagccactttcatttccggccacgg 108
|||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 82 attcctcgtcgttctccggcgttcctacggcggcgcagccactttcatttccggccacgg 141
Query: 109 ccgctcgccgcctccttctccgcccaaagcgcggcgtcggacacacaggaccgagtcgac 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ccgctcgccgcctccttctccgcccaaagcgcggcgtcggacacacaggaccgagtcgac 201
Query: 169 aactcgaagaaccgagtccccgaccgagtcatcacgcccaggtcacaggacttcaatgcg 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aactcgaagaaccgagtccccgaccgagtcatcacgcccaggtcacaggacttcaatgcg 261
Query: 229 tggtaccttgatatcatagccaacgccgagcttgccgattacggtccggttcgtggcacc 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tggtaccttgatatcatagccaacgccgagcttgccgattacggtccggttcgtggcacc 321
Query: 289 atggtcattcgtccctacggttacgccatttgggaatcaattcaggactttttgaatgtg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atggtcattcgtccctacggttacgccatttgggaatcaattcaggactttttgaatgtg 381
Query: 349 aagttcaaggagactgggcatagtaacatgtattttccacagtttatcccatactcattt 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aagttcaaggagactgggcatagtaacatgtattttccacagtttatcccatactcattt 441
Query: 409 atagagaaagaagcaagtcatgttgagggtttcagtcctgagctagcgctagttactatt 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atagagaaagaagcaagtcatgttgagggtttcagtcctgagctagcgctagttactatt 501
Query: 469 gggggtggaaaggaacttgaagagaaactcgtggtgcggcctacaagtgaaaccattgtg 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gggggtggaaaggaacttgaagagaaactcgtggtgcggcctacaagtgaaaccattgtg 561
Query: 529 aatcacatgttcactcagtggatccatagctaccgtgatcttcctctcatgattaaccag 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aatcacatgttcactcagtggatccatagctaccgtgatcttcctctcatgattaaccag 621
Query: 589 tgggcgaatgttacaagatgggagatgcgcactaaaccatttgtgagaactcttgaattt 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgggcgaatgttacaagatgggagatgcgcactaaaccatttgtgagaactcttgaattt 681
Query: 649 ctttggcaagaaggt 663
|||||||||||||||
Sbjct: 682 ctttggcaagaaggt 696
>gnl|LJGI|TC61277 similar to UniRef100_Q7XZD2 Cluster: Prolyl-tRNA synthetase; n=1;
Raphanus sativus|Rep: Prolyl-tRNA synthetase - Raphanus
sativus (Radish), partial (30%)
Length = 757
Score = 743 bits (375), Expect = 0.0
Identities = 378/379 (99%)
Strand = Plus / Plus
Query: 1128 tcacagctctggaatcagagttaaacttgatgactcagatcaaagaacccctgggtggaa 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcacagctctggaatcagagttaaacttgatgactcagatcaaagaacccctgggtggaa 61
Query: 1188 attcaatttctgggaaatgaagggagttcctcttagaattgaaattggtcctcgtgatgt 1247
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 62 attcaatttctgggaaatgaagggggttcctcttagaattgaaattggtcctcgtgatgt 121
Query: 1248 gtcaagcggaagtgtggtgatatccaggagagatatccctgggaagcaggggaaagtgtt 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtcaagcggaagtgtggtgatatccaggagagatatccctgggaagcaggggaaagtgtt 181
Query: 1308 tggaatttctatggagccttcgattttggaggcttatgtaaaagacaagttggatgagat 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tggaatttctatggagccttcgattttggaggcttatgtaaaagacaagttggatgagat 241
Query: 1368 acagtcttctcttttggaaagagcaattgcatttcgagatagcaacattgtagatgtgag 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acagtcttctcttttggaaagagcaattgcatttcgagatagcaacattgtagatgtgag 301
Query: 1428 cacatacgatgatcttaaagctgcaatatcacaaggcaaatgggcaaggggaccttggtc 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cacatacgatgatcttaaagctgcaatatcacaaggcaaatgggcaaggggaccttggtc 361
Query: 1488 tgcaagtgatgaagacgag 1506
|||||||||||||||||||
Sbjct: 362 tgcaagtgatgaagacgag 380
>gnl|LJGI|TC66230 similar to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 960
Score = 54.0 bits (27), Expect = 3e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1197 ctgggaaatgaagggagttcctcttagaattgaaattgg 1235
|||||||||||| || |||||||| ||||||||||||||
Sbjct: 276 ctgggaaatgaaaggcgttcctctaagaattgaaattgg 314