Miyakogusa Predicted Gene

Lj0g3v0295039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0295039.1 Non Chatacterized Hit- tr|J3L3G8|J3L3G8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G3,100,0.0000000000005, ,CUFF.19765.1
         (63 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g02450.1                                                        76   7e-15
Glyma08g40810.1                                                        75   1e-14
Glyma15g01910.1                                                        72   2e-13
Glyma08g26860.1                                                        63   7e-11
Glyma14g39930.1                                                        50   7e-07
Glyma17g38100.1                                                        48   2e-06

>Glyma02g02450.1 
          Length = 881

 Score = 76.3 bits (186), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 33/34 (97%), Positives = 33/34 (97%)

Query: 30  GRGNKSSGDNFHAAPNIDHSQEFVRNDLKEWLCW 63
           GRGNKSSGDNFHAAPNIDHSQEFVR DLKEWLCW
Sbjct: 614 GRGNKSSGDNFHAAPNIDHSQEFVRKDLKEWLCW 647


>Glyma08g40810.1 
          Length = 911

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/34 (94%), Positives = 33/34 (97%)

Query: 30  GRGNKSSGDNFHAAPNIDHSQEFVRNDLKEWLCW 63
           GRGNKSSGDNFHAAPNIDHSQ+FVR DLKEWLCW
Sbjct: 644 GRGNKSSGDNFHAAPNIDHSQDFVRKDLKEWLCW 677


>Glyma15g01910.1 
          Length = 159

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/34 (91%), Positives = 32/34 (94%)

Query: 30  GRGNKSSGDNFHAAPNIDHSQEFVRNDLKEWLCW 63
           GRGNKSSGDNF AAPNIDHSQ+FVR DLKEWLCW
Sbjct: 114 GRGNKSSGDNFLAAPNIDHSQDFVRKDLKEWLCW 147


>Glyma08g26860.1 
          Length = 481

 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 30/34 (88%)

Query: 30  GRGNKSSGDNFHAAPNIDHSQEFVRNDLKEWLCW 63
           GRGN SSGD FHAAPN+DHSQ+FVR D+KEWL W
Sbjct: 210 GRGNPSSGDIFHAAPNVDHSQDFVRKDIKEWLNW 243


>Glyma14g39930.1 
          Length = 413

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 18  GFLPRLKTFESFGRGNKSSGDNFHAAPNIDHSQEFVRNDLKEWLCW 63
           G+  R  T +S G GN+S+G  F   PNIDH+Q+FVR D+  WL W
Sbjct: 135 GWDERAVTSDSGGLGNRSTGAIFQGFPNIDHTQDFVRKDIIGWLRW 180


>Glyma17g38100.1 
          Length = 249

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 26/33 (78%)

Query: 31 RGNKSSGDNFHAAPNIDHSQEFVRNDLKEWLCW 63
          +GN+S+GD FH  PNIDH+++FVR D+  WL W
Sbjct: 20 KGNRSTGDIFHGFPNIDHTKDFVRKDIIGWLRW 52