Miyakogusa Predicted Gene

Lj0g3v0288939.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0288939.2 Non Characterized Hit- tr|Q9M399|Q9M399_ARATH
Putative uncharacterized protein F2K15.260
OS=Arabidop,45.6,2e-18,seg,NULL; Putative isomerase YbhE,NULL; no
description,WD40/YVTN repeat-like-containing domain; WD40,CUFF.19327.2
         (534 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g059090.1 | transducin/WD40 repeat protein | HC | chr1:217...   749   0.0  
Medtr5g077160.1 | transducin/WD40 repeat protein | HC | chr5:329...   749   0.0  
Medtr1g059090.2 | transducin/WD40 repeat protein | HC | chr1:217...   745   0.0  
Medtr1g085950.1 | transducin/WD40 domain protein | HC | chr1:384...   127   2e-29

>Medtr1g059090.1 | transducin/WD40 repeat protein | HC |
           chr1:21763914-21774360 | 20130731
          Length = 851

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/534 (69%), Positives = 416/534 (77%), Gaps = 1/534 (0%)

Query: 1   MGDNDKLLESSGVHEASFFLLKEVITXXXXXXXXXXXXXXXQYSSKMLLAIGKGSGSFEI 60
           +GDNDKLL+SS V   SF LLKEVIT               QY SKMLLAIGK SGS EI
Sbjct: 319 LGDNDKLLKSSEVDPNSFLLLKEVITANAVPVSVLSVTVHVQYPSKMLLAIGKVSGSIEI 378

Query: 61  WLCDISTREFDKLGSYDAHDCIITGLAWAFGGRFLYSCSQDNLLHSWILHESRLDEVSIL 120
           WLCDIS+REFDKLGSYDAH   +T L WAF GRFL SCSQDN+L  WILHE  LDE+ I 
Sbjct: 379 WLCDISSREFDKLGSYDAHYYAVTSLTWAFDGRFLCSCSQDNILRGWILHERLLDEIPIF 438

Query: 121 SDFPRSNDSICPSRDAFNSCFGVAVSHGNLVIATVNCFDVEKLNRMYEGRILRAAIEYFW 180
           SD PRSNDS CPSRD F SCFGVAVS GNLVIATV+CFD++KLNRMYEGRILRAAIEYFW
Sbjct: 439 SDMPRSNDSTCPSRDTFESCFGVAVSPGNLVIATVHCFDIDKLNRMYEGRILRAAIEYFW 498

Query: 181 IGGLHVDVWLKPPFSCYIEKYSSFPEKELTYWGANIIWSLNQYQCLDKPLVLWDIIAALL 240
           IGGL VDV LK PFSC IE+  +FPEKELTYWGANIIWSLN YQC+DKPLV WDIIAALL
Sbjct: 499 IGGLQVDVLLKSPFSCNIEELPTFPEKELTYWGANIIWSLNHYQCVDKPLVFWDIIAALL 558

Query: 241 GLKDNKSKYVENLLINWLSLSFLGYHMDLLPENVLSCVSSSLPNVPSRLLHLLNIICRRV 300
             K+NKSKYVE+L++ WLSLSFLG HM+L PE VLS + S L ++PSRLLHLLNIICRRV
Sbjct: 559 AFKENKSKYVEHLVVKWLSLSFLGSHMNLPPEEVLSRLISRLSDIPSRLLHLLNIICRRV 618

Query: 301 VLAELDADQITGINSKIRNLEGACPDTEKKITMWXXXXXXXXXXXXXXXVGLTFSAFRNS 360
           +LA+LDADQ+T INSK +N++G CP  E+++T W               VGL+FSA + S
Sbjct: 619 MLAQLDADQLTIINSKFQNMDGVCPVIEEEMTKWVEVLLGSERELRERNVGLSFSALQTS 678

Query: 361 MSSFKATPSRPGCWYLVGLAQMEQWVALDQEHVREQLKFIASELTHEKRFVTSGYSEVEP 420
           M + +ATPS PG WY VGLAQMEQWVAL+QE + +QLK IAS++THEKRFV    S +E 
Sbjct: 679 MFNQEATPSLPGRWYPVGLAQMEQWVALNQEDIHDQLKSIASKVTHEKRFVPKKCSAMES 738

Query: 421 CSYCSASVVFESPEFGLCQGENCSSGNVKRHQLLRCAVCMEVCPSTPLWFCVCCHRFAFR 480
           C+YCSA V FESPEFG CQ ENCSSGNVKR +LLRCAVCMEVCPSTPLWFCVCCHRF FR
Sbjct: 739 CNYCSAPVPFESPEFGFCQSENCSSGNVKRRKLLRCAVCMEVCPSTPLWFCVCCHRFVFR 798

Query: 481 LAPEPLFRMSSFCLDLDXXXXXXXXXXXXRPLCPFCGILLQRKQPDFLLSPTPV 534
           LAPEPLFRMSSFC+               +PLCPFCGILLQRKQPDFLLS +PV
Sbjct: 799 LAPEPLFRMSSFCI-DSDSSNSSSQAVSSKPLCPFCGILLQRKQPDFLLSSSPV 851


>Medtr5g077160.1 | transducin/WD40 repeat protein | HC |
           chr5:32928457-32919680 | 20130731
          Length = 849

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/534 (68%), Positives = 419/534 (78%)

Query: 1   MGDNDKLLESSGVHEASFFLLKEVITXXXXXXXXXXXXXXXQYSSKMLLAIGKGSGSFEI 60
           +GD DKLL+SS V + SF LLKEVIT               QY SKMLLAIGK SGS EI
Sbjct: 316 LGDTDKLLKSSEVDQTSFLLLKEVITVNAVPVSVLSVTVHVQYPSKMLLAIGKVSGSIEI 375

Query: 61  WLCDISTREFDKLGSYDAHDCIITGLAWAFGGRFLYSCSQDNLLHSWILHESRLDEVSIL 120
           W+CDIS+REFDKLGSYDAH   +TGL WAFGGRFL SCSQDNLL  WILHE  L+E++IL
Sbjct: 376 WICDISSREFDKLGSYDAHYYGVTGLTWAFGGRFLCSCSQDNLLRGWILHERCLEEITIL 435

Query: 121 SDFPRSNDSICPSRDAFNSCFGVAVSHGNLVIATVNCFDVEKLNRMYEGRILRAAIEYFW 180
           S+ PRSNDS CPSRDAF+SCFGVAVS GNL+IATV+CFDV+KLNRMYEGRIL+AAIEYFW
Sbjct: 436 SEMPRSNDSTCPSRDAFDSCFGVAVSPGNLIIATVHCFDVDKLNRMYEGRILKAAIEYFW 495

Query: 181 IGGLHVDVWLKPPFSCYIEKYSSFPEKELTYWGANIIWSLNQYQCLDKPLVLWDIIAALL 240
           IGGL VD WLK PFSCYIE+  SFPEKELTYWGAN+IWSLNQYQCLDKPL+ WDIIAALL
Sbjct: 496 IGGLQVDDWLKSPFSCYIEELPSFPEKELTYWGANVIWSLNQYQCLDKPLIFWDIIAALL 555

Query: 241 GLKDNKSKYVENLLINWLSLSFLGYHMDLLPENVLSCVSSSLPNVPSRLLHLLNIICRRV 300
             KDNKSKYVE+L+I WLSLSFLG H++L  E VLS V S L ++PSRLLHLLNI+CRRV
Sbjct: 556 AFKDNKSKYVEHLVIKWLSLSFLGSHLNLPAEEVLSRVISRLSDIPSRLLHLLNIMCRRV 615

Query: 301 VLAELDADQITGINSKIRNLEGACPDTEKKITMWXXXXXXXXXXXXXXXVGLTFSAFRNS 360
           +LA+LDADQIT INSK++N+E  CP  E+++T W               +G +FSA + +
Sbjct: 616 MLAQLDADQITRINSKVQNIEVVCPVIEEQMTKWIEILLVSERELRERQIGFSFSAVKTA 675

Query: 361 MSSFKATPSRPGCWYLVGLAQMEQWVALDQEHVREQLKFIASELTHEKRFVTSGYSEVEP 420
           MS  +  P++PG WY VGLAQME+WVAL+QEHVR+QLKFI S++THEKRFVT   S VE 
Sbjct: 676 MSHLEEPPAQPGRWYPVGLAQMEKWVALNQEHVRDQLKFIVSKVTHEKRFVTKRCSTVES 735

Query: 421 CSYCSASVVFESPEFGLCQGENCSSGNVKRHQLLRCAVCMEVCPSTPLWFCVCCHRFAFR 480
           CSYCSA V F+SPEFG CQ E C+ GNVKRH+LLRCAV MEVCPS+PLW CVCCHR+ FR
Sbjct: 736 CSYCSAPVPFDSPEFGFCQSEKCTGGNVKRHKLLRCAVSMEVCPSSPLWLCVCCHRYVFR 795

Query: 481 LAPEPLFRMSSFCLDLDXXXXXXXXXXXXRPLCPFCGILLQRKQPDFLLSPTPV 534
           LAPE LFRMSS  LD D            +PLCPFCGILLQRKQPDFLLS  PV
Sbjct: 796 LAPEALFRMSSSSLDSDSSNGSSSRAVSSKPLCPFCGILLQRKQPDFLLSTAPV 849


>Medtr1g059090.2 | transducin/WD40 repeat protein | HC |
           chr1:21763923-21774315 | 20130731
          Length = 852

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/535 (69%), Positives = 416/535 (77%), Gaps = 2/535 (0%)

Query: 1   MGDNDKLLESSGVHEASFFLLKEVITXXXXXXXXXXXXXXXQYSSKMLLAIGKGSGSFEI 60
           +GDNDKLL+SS V   SF LLKEVIT               QY SKMLLAIGK SGS EI
Sbjct: 319 LGDNDKLLKSSEVDPNSFLLLKEVITANAVPVSVLSVTVHVQYPSKMLLAIGKVSGSIEI 378

Query: 61  WLCDISTREFDKLGSYDAHDCIITGLAWAFGGRFLYSCSQDNLLHSWILHESRLDEVSIL 120
           WLCDIS+REFDKLGSYDAH   +T L WAF GRFL SCSQDN+L  WILHE  LDE+ I 
Sbjct: 379 WLCDISSREFDKLGSYDAHYYAVTSLTWAFDGRFLCSCSQDNILRGWILHERLLDEIPIF 438

Query: 121 SDFPRSNDSICPSRDAFNSCFGVAVSHGNLVIATVNCFDVEKLNRMYEGRILRAAIEYFW 180
           SD PRSNDS CPSRD F SCFGVAVS GNLVIATV+CFD++KLNRMYEGRILRAAIEYFW
Sbjct: 439 SDMPRSNDSTCPSRDTFESCFGVAVSPGNLVIATVHCFDIDKLNRMYEGRILRAAIEYFW 498

Query: 181 IGGLHVDVWLKPPFSCYIEKYSSFPEKELTYWGANIIWSLNQYQCLDKPLVLWDIIAALL 240
           IGGL VDV LK PFSC IE+  +FPEKELTYWGANIIWSLN YQC+DKPLV WDIIAALL
Sbjct: 499 IGGLQVDVLLKSPFSCNIEELPTFPEKELTYWGANIIWSLNHYQCVDKPLVFWDIIAALL 558

Query: 241 GLKDNKSKYVENLLINWLSLSFLGYHMDLLPENVLSCVSSSLPNVPSRLLHLLNIICRRV 300
             K+NKSKYVE+L++ WLSLSFLG HM+L PE VLS + S L ++PSRLLHLLNIICRRV
Sbjct: 559 AFKENKSKYVEHLVVKWLSLSFLGSHMNLPPEEVLSRLISRLSDIPSRLLHLLNIICRRV 618

Query: 301 VLAELDADQITGINSKIRNLEGACPDTEKKITMWXXXXXXXXXXXXXXXVGLTFSAFRNS 360
           +LA+LDADQ+T INSK +N++G CP  E+++T W               VGL+FSA + S
Sbjct: 619 MLAQLDADQLTIINSKFQNMDGVCPVIEEEMTKWVEVLLGSERELRERNVGLSFSALQTS 678

Query: 361 MSSFKATPSRPGCWYLVGLAQMEQWVALDQEHVREQLKFIASELTHEK-RFVTSGYSEVE 419
           M + +ATPS PG WY VGLAQMEQWVAL+QE + +QLK IAS++THEK RFV    S +E
Sbjct: 679 MFNQEATPSLPGRWYPVGLAQMEQWVALNQEDIHDQLKSIASKVTHEKSRFVPKKCSAME 738

Query: 420 PCSYCSASVVFESPEFGLCQGENCSSGNVKRHQLLRCAVCMEVCPSTPLWFCVCCHRFAF 479
            C+YCSA V FESPEFG CQ ENCSSGNVKR +LLRCAVCMEVCPSTPLWFCVCCHRF F
Sbjct: 739 SCNYCSAPVPFESPEFGFCQSENCSSGNVKRRKLLRCAVCMEVCPSTPLWFCVCCHRFVF 798

Query: 480 RLAPEPLFRMSSFCLDLDXXXXXXXXXXXXRPLCPFCGILLQRKQPDFLLSPTPV 534
           RLAPEPLFRMSSFC+               +PLCPFCGILLQRKQPDFLLS +PV
Sbjct: 799 RLAPEPLFRMSSFCI-DSDSSNSSSQAVSSKPLCPFCGILLQRKQPDFLLSSSPV 852


>Medtr1g085950.1 | transducin/WD40 domain protein | HC |
           chr1:38466661-38466389 | 20130731
          Length = 90

 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/84 (76%), Positives = 67/84 (79%), Gaps = 2/84 (2%)

Query: 452 QLLRCAVCMEVCPSTPLWFCVCCHRFAF-RLAPEPLFRMSSFCLDLDXXXXXXXXXXXXR 510
           QLLRCAVCMEVCPSTPLWFCVCCHRF   RLAPEPLFRMSSFC+D D            +
Sbjct: 8   QLLRCAVCMEVCPSTPLWFCVCCHRFVLIRLAPEPLFRMSSFCIDSD-SSNRSSQAVPSK 66

Query: 511 PLCPFCGILLQRKQPDFLLSPTPV 534
           PLCPFCGILLQRKQPDFLLS +PV
Sbjct: 67  PLCPFCGILLQRKQPDFLLSSSPV 90