Miyakogusa Predicted Gene
- Lj0g3v0288939.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0288939.2 Non Chatacterized Hit- tr|Q9M399|Q9M399_ARATH
Putative uncharacterized protein F2K15.260
OS=Arabidop,45.6,2e-18,seg,NULL; Putative isomerase YbhE,NULL; no
description,WD40/YVTN repeat-like-containing domain; WD40,CUFF.19327.2
(1605 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66152 weakly similar to UniRef100_A7QEW3 Cluster: Chr... 561 e-159
gnl|LJGI|TC82060 similar to UniRef100_Q5N9R6 Cluster: Transducin... 464 e-130
gnl|LJGI|TC69458 weakly similar to UniRef100_A7QEW3 Cluster: Chr... 157 3e-37
gnl|LJGI|TC69231 121 1e-26
>gnl|LJGI|TC66152 weakly similar to UniRef100_A7QEW3 Cluster: Chromosome chr16
scaffold_86, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_86, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 736
Score = 561 bits (283), Expect = e-159
Identities = 443/495 (89%), Gaps = 6/495 (1%)
Strand = Plus / Plus
Query: 1110 acctggctgttggtatcttgttggactagcacagatggaacaatgggttgcattagacca 1169
||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||| ||
Sbjct: 1 acctggctgttggtatcctgttggactagcacagatggaaaaatggattgctttagatca 60
Query: 1170 ggaacatgtacgagagcagttgaaattcattgcatcagaacttactcatgaaaaaag--- 1226
||||||||||||||||||| ||||||||||||||||| | |||||||||| |||||
Sbjct: 61 ggaacatgtacgagagcaggtgaaattcattgcatcaaacgttactcatgagaaaagcag 120
Query: 1227 gtttgtgactagtggatattcagaagtggagccatgcagttattgttctgcatctgttgt 1286
||||||||| ||||||| |||| ||| |||||||||||||||||||| ||||||||| |
Sbjct: 121 gtttgtgacctgtggatactcagcagtcgagccatgcagttattgttcagcatctgttct 180
Query: 1287 atttgaatcccccgagtttggtttgtgccaaggtgaaaattgcagtagtggcaatgttaa 1346
|||||| ||||||||||||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 181 atttgagtcccccgagtttggtttttgtcaaggtgaaaattgcagcagtggcaatgttaa 240
Query: 1347 acggcaccagttgttgagatgtgctgtttgcatggaggtttgccctagtactcccctatg 1406
||| ||| ||| ||||||||| |||||| ||||||| ||||||||||| ||||||||||
Sbjct: 241 acgtcacaggttattgagatgttctgtttccatggagatttgccctagtgctcccctatg 300
Query: 1407 gttttgtgtttgttgccataggtttgcatttaggttggcaccagaaccactttttagaat 1466
||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||
Sbjct: 301 gttttgtgtatgttgccacaggtttgcatttagagtggcacctgaaccactttttagaat 360
Query: 1467 gtcttcattttgtctagatttagattcttcaactaaatcatcctctcaagtagtatcctc 1526
||||||||||||||||||| |||| |||||||||||||| ||||||| ||||||| ||
Sbjct: 361 gtcttcattttgtctagatctagagtcttcaactaaatcttcctctc---tagtatcgtc 417
Query: 1527 aagaccgttgtgtcccttttgcgggatactgctacaaagaaaacaaccagactttctact 1586
|||||| || ||||||||||| |||||||||| |||||||||||| ||||||||||||||
Sbjct: 418 aagaccattatgtcccttttgtgggatactgcaacaaagaaaacagccagactttctact 477
Query: 1587 ttcaccgacacctgt 1601
|| ||| |||||||
Sbjct: 478 ctctccggcacctgt 492
>gnl|LJGI|TC82060 similar to UniRef100_Q5N9R6 Cluster: Transducin family protein /
WD-40 repeat family protein-like; n=1; Oryza sativa
Japonica Group|Rep: Transducin family protein / WD-40
repeat family protein-like - Oryza sativa subsp. japonica
(Rice), partial (3%)
Length = 470
Score = 464 bits (234), Expect = e-130
Identities = 262/270 (97%), Gaps = 1/270 (0%)
Strand = Plus / Plus
Query: 1337 gcaatgttaaacggcaccagttgttgagatgtgctgtttgcatggaggtttgccctagta 1396
|||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||
Sbjct: 1 gcaatgttaaacggcaccagccgctgagatgtgctgtttgcatggaggttggccctagta 60
Query: 1397 ctcccctatggttttgtgtttgttgccataggtttgcatttaggttggcaccagaaccac 1456
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcccctatgcttttgtgtttgttgccataggtttgcatttaggttggcaccagaaccac 120
Query: 1457 tttttagaatgtcttcattttgtctagatttagattcttcaactaaatcatcctctcaag 1516
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttctagaatgtcttcattttgtctagatttagattcttcaactaaatcatcctctcaag 180
Query: 1517 tagtatcctcaaga-ccgttgtgtcccttttgcgggatactgctacaaagaaaacaacca 1575
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 tagtatcctcaagacccgttgtgtcccttttgcgggatactgctaccaagaaaacaacca 240
Query: 1576 gactttctactttcaccgacacctgtatag 1605
||||||||||||||||||||||||||||||
Sbjct: 241 gactttctactttcaccgacacctgtatag 270
>gnl|LJGI|TC69458 weakly similar to UniRef100_A7QEW3 Cluster: Chromosome chr16
scaffold_86, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_86, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 535
Score = 157 bits (79), Expect = 3e-37
Identities = 296/365 (81%), Gaps = 10/365 (2%)
Strand = Plus / Plus
Query: 847 ccaaacgttccttctcgactgctacatttgctcaatataatatgtaggcgcgtggtgtta 906
|||||||||| |||| ||| |||| |||||||||||||||| |||||| | |||||||||
Sbjct: 137 ccaaacgttctttcttgacggctaaatttgctcaatataatttgtaggtgtgtggtgtta 196
Query: 907 gcagagctc-gatgctgatcaaataactggaata----aatagcaagattcgaaacttgg 961
|| |||| |||||||| ||||| |||| || | | ||| | ||||| ||||||||
Sbjct: 197 gccaagctttgatgctgaacaaatgactgaaacagtcaagtagaatgattcaaaacttgg 256
Query: 962 aaggggcctgccctgacactgaaaagaaaattactatgtggatcgaaattcttttgcgca 1021
|| || ||||||| || |||||| || ||||||||||||| |||||| |||| ||
Sbjct: 257 aaaggctatgccctgccattgaaaaccaatttactatgtggatagaaattattttaacca 316
Query: 1022 gtgaaagagagctccgagaaaggcttgtgggtcttactttttctgctttccgaaatagca 1081
||||||||||||| ||||||||||||||| | ||| |||||||||||||| ||||||||
Sbjct: 317 gtgaaagagagctttgagaaaggcttgtggattttagtttttctgctttccaaaatagca 376
Query: 1082 tgtcctctttcaaagcaactccttcccgacctggctg---ttgg--tatcttgttggact 1136
||||||| |||| |||||||||| || ||| || |||| |||| || || |||
Sbjct: 377 tgtcctcccctgaagctactccttcccaacgtggttgttattggcatatcatgctgaact 436
Query: 1137 agcacagatggaacaatgggttgcattagaccaggaacatgtacgagagcagttgaaatt 1196
|||||||||| ||| |||| |||| ||||| |||||||||| | ||||| |||||||||
Sbjct: 437 agcacagatgcaactatggattgctttagatcaggaacatgcataagagcggttgaaatt 496
Query: 1197 cattg 1201
|||||
Sbjct: 497 cattg 501
>gnl|LJGI|TC69231
Length = 703
Score = 121 bits (61), Expect = 1e-26
Identities = 204/249 (81%), Gaps = 7/249 (2%)
Strand = Plus / Plus
Query: 847 ccaaacgttccttctcgactgctacatttgctcaatataatatgtaggcgcgtggtgtta 906
|||||| ||||||||||| ||||||||| |||||||||||||||||| | | |||||||
Sbjct: 206 ccaaacattccttctcgattgctacattcactcaatataatatgtaggtgtgcggtgtta 265
Query: 907 gcagagc-tcgatgctgatcaaataactggaataaatagcaagattcgaaacttggaagg 965
||| ||| |||||| |||| ||||||| ||||||||||| | ||||| ||||||||||
Sbjct: 266 gcaaagcttcgatggtgattaaataacgggaataaatagaatgattcaaaacttggaaaa 325
Query: 966 g----gcc--tgccctgacactgaaaagaaaattactatgtggatcgaaattcttttgcg 1019
| ||| |||| || | |||||| || ||||||| | ||| ||| | |||| |
Sbjct: 326 gctatgccattgccttgcaattgaaaatcaatttactatctcgatagaagtcattttaag 385
Query: 1020 cagtgaaagagagctccgagaaaggcttgtgggtcttactttttctgctttccgaaatag 1079
|||||||||||||||| ||||||||||||||| | ||| |||||| |||||| ||||||
Sbjct: 386 cagtgaaagagagctctgagaaaggcttgtggattttaggttttcttctttccaaaatag 445
Query: 1080 catgtcctc 1088
|||||||||
Sbjct: 446 catgtcctc 454
Score = 67.9 bits (34), Expect = 2e-10
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 1171 gaacatgtacgagagcagttgaaattcattgcatcagaacttactcatgaaaaaaggt 1228
|||||||||||||||| |||||||||||||| |||| || || ||||| |||||||||
Sbjct: 497 gaacatgtacgagagcggttgaaattcattgtatcaaaagttgctcataaaaaaaggt 554