Miyakogusa Predicted Gene

Lj0g3v0286889.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0286889.1 tr|A9SNU5|A9SNU5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_230287,38.57,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL;
VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL,NULL,CUFF.19154.1
         (573 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66774 similar to UniRef100_Q5D6H2 Cluster: CNGC2; n=1...  1136   0.0  

>gnl|LJGI|TC66774 similar to UniRef100_Q5D6H2 Cluster: CNGC2; n=1; Gossypium
           hirsutum|Rep: CNGC2 - Gossypium hirsutum (Upland cotton)
           (Gossypium mexicanum), partial (23%)
          Length = 919

 Score = 1136 bits (573), Expect = 0.0
 Identities = 573/573 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcctaccttctcctctctccctcggtggattggtaagaagcttctggggaagagtcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atgcctaccttctcctctctccctcggtggattggtaagaagcttctggggaagagtcct 311

                                                                       
Query: 61  ctgagtacagtgagcaacatcggagacggcagcagcggcggcgatgctgcaaccccaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctgagtacagtgagcaacatcggagacggcagcagcggcggcgatgctgcaaccccaatt 371

                                                                       
Query: 121 gttgatgacagcagtcctatcggaagcgtggtggagtgttatgcctgcacgcaagtaggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gttgatgacagcagtcctatcggaagcgtggtggagtgttatgcctgcacgcaagtaggc 431

                                                                       
Query: 181 gtgcccgtgttccactccaccagctgcgatagctgtcatcaacctcaatgggaggcatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gtgcccgtgttccactccaccagctgcgatagctgtcatcaacctcaatgggaggcatgt 491

                                                                       
Query: 241 gcgggatcatcgctggtcccgatacagaaccgaacaggggggaagacccagagtttcagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gcgggatcatcgctggtcccgatacagaaccgaacaggggggaagacccagagtttcagc 551

                                                                       
Query: 301 gcccattcagggccgttcgggcacgtagtggatccgaggagcaagcgcgtgcaggtgtgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gcccattcagggccgttcgggcacgtagtggatccgaggagcaagcgcgtgcaggtgtgg 611

                                                                       
Query: 361 aaccgcgcgttgctgctggcgcgtggggtggcgctggccatagacccgttgtttttctac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aaccgcgcgttgctgctggcgcgtggggtggcgctggccatagacccgttgtttttctac 671

                                                                       
Query: 421 gcgctgtcaatcgggagagcggggtcgccgtgcttgtacatggacggtgggcttgcggcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gcgctgtcaatcgggagagcggggtcgccgtgcttgtacatggacggtgggcttgcggcg 731

                                                                       
Query: 481 atggtgacggtggcgcgcacgtgtgtggatgcggtgcatttgctgcacgtgtggctgcag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atggtgacggtggcgcgcacgtgtgtggatgcggtgcatttgctgcacgtgtggctgcag 791

                                            
Query: 541 ttcaggctggcgtacgtgtcgagggagtcgctg 573
           |||||||||||||||||||||||||||||||||
Sbjct: 792 ttcaggctggcgtacgtgtcgagggagtcgctg 824