Miyakogusa Predicted Gene

Lj0g3v0283449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0283449.1 Non Characterized Hit- tr|I1LKC8|I1LKC8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6914
PE=,86.3,0,seg,NULL,CUFF.19768.1
         (946 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g060795.1 | RNA ligase, putative | HC | chr4:22390932-2237...  1735   0.0  

>Medtr4g060795.1 | RNA ligase, putative | HC | chr4:22390932-22371212
            | 20130731
          Length = 1129

 Score = 1735 bits (4493), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 824/947 (87%), Positives = 885/947 (93%), Gaps = 3/947 (0%)

Query: 1    MYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLERNHMCISME 60
            MYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF EAWGTEASKKQAEFN+FLE+NHMCISME
Sbjct: 185  MYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFHEAWGTEASKKQAEFNDFLEKNHMCISME 244

Query: 61   LVTAVLGDHGQRPQEDFVVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRK 120
            LVTAVLGDHGQRP ED+VVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRK
Sbjct: 245  LVTAVLGDHGQRPLEDYVVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRK 304

Query: 121  SASSFFATYDALCEEGTATSVCKVLDEIADVSVPGSKDHVKAQGEILEGLVARLVSHESS 180
            SASSFFA YDALCEEGTATSVCK LDEIAD+SVPGSKDHVKAQGEILEGLVARLV+HESS
Sbjct: 305  SASSFFAAYDALCEEGTATSVCKTLDEIADISVPGSKDHVKAQGEILEGLVARLVNHESS 364

Query: 181  NHIEKVLKEFPPPPADGVALDFGPSLREICAANRSDEKQQIKALLESVGSSFCPDYSDWY 240
              IEK+L EFPPPPADG ALDFG SLREICAANRSDEKQQ+KALLE VGSSFCPDY+DW+
Sbjct: 365  KQIEKILMEFPPPPADGAALDFGSSLREICAANRSDEKQQMKALLEGVGSSFCPDYADWF 424

Query: 241  GTDGADIHSRNVDRSVVSKFLQAHPADYSTKKLQEIIRLMREKRFPAAFKCYHNFHKVDA 300
            GTD ADI SRN D+SV+SKFLQAHPADYSTKKLQE++RL+REKR+PAAFKCYHNFHKVDA
Sbjct: 425  GTDAADIQSRNADKSVLSKFLQAHPADYSTKKLQELVRLVREKRYPAAFKCYHNFHKVDA 484

Query: 301  ISSDNVFYKMVIHVHSDSAFRRYQKEMRHRPGLWPLYRGFFVDINLFKANKEKAAEISMK 360
            IS+D++FYKMVIHVHSDS FRRYQKEMR+RPGLWPLYRGFFVDINLFKA+KEK AEIS K
Sbjct: 485  ISNDDLFYKMVIHVHSDSTFRRYQKEMRNRPGLWPLYRGFFVDINLFKADKEKVAEIS-K 543

Query: 361  XXXXXXXXXXXEKDDFADEDANLMVKLKFLTYKLRTFLIRNGLPVLFKEGQSAYKAYYLR 420
                       EKDDFADEDANLMVKLKFLTYKLRTFLIRNGL VLFKEG  AYKAYYLR
Sbjct: 544  NSVNERGSSGTEKDDFADEDANLMVKLKFLTYKLRTFLIRNGLSVLFKEGPGAYKAYYLR 603

Query: 421  QMKIWGTSPGKQKELSKMLDEWAVHIRRKCGNKQLSSSIYLSEAEPFLEQFAKRSPQNQA 480
            QMKIWGTSPGKQKELSKMLDEWAV+IRRKCGNKQLSSSIYLSEAEPFLEQFAKRSPQNQA
Sbjct: 604  QMKIWGTSPGKQKELSKMLDEWAVYIRRKCGNKQLSSSIYLSEAEPFLEQFAKRSPQNQA 663

Query: 481  LIGSAGSLVRTEDFLAIVEEGQDEEGDLVAERDMAPSGPSISVKDTVPKNEGLIVFFPGI 540
            LIGSAGSLVRTEDFLAIVE GQDEEGDL +ER +APS P+ISVKDTVPK+EG+IVFFPGI
Sbjct: 664  LIGSAGSLVRTEDFLAIVEGGQDEEGDLASER-VAPSEPNISVKDTVPKDEGMIVFFPGI 722

Query: 541  PGCAKSALCKELLNAQGG-LGDDRPVHSLMGDLIKGKYWQKVAEERRKKPNSIMLADKNA 599
            PGCAKSALCKELLNAQGG LGDDRPVHSLMGDLIKGKYWQKVAEER+KKP SIMLADKNA
Sbjct: 723  PGCAKSALCKELLNAQGGLLGDDRPVHSLMGDLIKGKYWQKVAEERKKKPKSIMLADKNA 782

Query: 600  PNKEVWRQIEDMCRKTKASAVPVVPESEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKA 659
            PN+EVWRQIEDMCR+T+ASAVPVVPESEGTDSNPFSLDALAVF++RVLQRVNHPG+LDKA
Sbjct: 783  PNEEVWRQIEDMCRRTRASAVPVVPESEGTDSNPFSLDALAVFVYRVLQRVNHPGSLDKA 842

Query: 660  SPNAGYVLLIFYDLYDGESRKEFEGELIERFGSLVKMPLLKSDRNPLPEAVQCILVEGIN 719
            SPNAGYVLL+FY LYDG+SRKEFEGELI+RFGSLVKMPLLK+DRNPLPEAVQCIL EGI+
Sbjct: 843  SPNAGYVLLMFYHLYDGKSRKEFEGELIDRFGSLVKMPLLKNDRNPLPEAVQCILEEGID 902

Query: 720  LFKLHSKRHGRLESTKGSYAKEWIKWEKQLRDILNQTAEYFNSIQVPFDFAVKQVSEQLR 779
            L+KLH+KRHGRLESTKG+YAKEW+KWEKQLRDIL+  A+YFNS+QVPF+FAVKQV EQLR
Sbjct: 903  LYKLHTKRHGRLESTKGTYAKEWMKWEKQLRDILSGNADYFNSVQVPFEFAVKQVLEQLR 962

Query: 780  NIAKGEYTAPDTETRKLGAIVFAAISVPVAEIQGVLNNLAEKNPKIDAFLKGNHLENLNR 839
            NIAKG+YT PDTE R  G IVFAA+S+PV +IQGVLNNLA+ NPKID F K  +L+ LNR
Sbjct: 963  NIAKGDYTPPDTEKRTFGTIVFAALSIPVIDIQGVLNNLAKNNPKIDEFFKDKNLDKLNR 1022

Query: 840  AHLTLAHKRSHGIKAVADYGLWLHIKVPVELTALLLSDKMAALEACPGSVDGDKIVSKNA 899
            AHLTLAHKRSHGIKAVADYGLWLH K PVELTALL SDKMAA EA PGSV+G+KIV KNA
Sbjct: 1023 AHLTLAHKRSHGIKAVADYGLWLHKKAPVELTALLFSDKMAAFEAFPGSVEGEKIVPKNA 1082

Query: 900  WPHITLWTGEGVAAKDANMLPQLFAEGKANRIDFNPPISIYGTMEFY 946
            +PHITLWT +GV+AKDANML QLFAEGKANRIDFNPPI++ GT+EFY
Sbjct: 1083 FPHITLWTSQGVSAKDANMLTQLFAEGKANRIDFNPPINVSGTVEFY 1129