Miyakogusa Predicted Gene

Lj0g3v0282049.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0282049.1 Non Characterized Hit- tr|B9SZZ5|B9SZZ5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,28.9,0.000000000000008, ,CUFF.18762.1
         (215 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g062260.1 | far-red elongated hypocotyl protein, putative ...   152   2e-37
Medtr7g062260.2 | far-red elongated hypocotyl protein, putative ...   149   1e-36
Medtr7g062260.3 | far-red elongated hypocotyl protein, putative ...   134   8e-32

>Medtr7g062260.1 | far-red elongated hypocotyl protein, putative |
           HC | chr7:22609695-22607237 | 20130731
          Length = 213

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 124/216 (57%), Gaps = 29/216 (13%)

Query: 1   MEANFENPSQINRFCVDGLHKTDIIEWNKKRKPQSDPLDLLRPRHKCWIGNSSSEHDLIS 60
           +EA  + PSQ+NRF VD +H  +IIEWNKKRK Q   LD+LRP+HKC + + SSE   +S
Sbjct: 3   IEARTKIPSQVNRFHVDEMHDINIIEWNKKRKLQGFQLDMLRPKHKCRVESFSSEDTSMS 62

Query: 61  DENPVLEGMHMYVVKGRMDTELLDVCSEPESAKDSNSFIEDSSTSISVDSNNVKDSHSSL 120
           DE+P+    + + V  RMD   LD  SEPESAKDSNSFIEDS TS+S++     ++ S+ 
Sbjct: 63  DESPIFGSANNHTVNSRMDVAFLDDRSEPESAKDSNSFIEDSDTSMSINEEAKLEADSAN 122

Query: 121 DVSASEKVCYEEDETFVDKEYNPSYHFADLNALKSLEEHFLGIGSGTDHVYSGYANEN-I 179
             S                    SY   D  A K+ EEH          VY+ Y  ++  
Sbjct: 123 TYS--------------------SYDDLDSQAFKNPEEHL--------QVYAEYVKDSGD 154

Query: 180 EESGDKGFEDILYSKGENPTTYVLSSGRWNVNQEVQ 215
           ++S DK FED L+S G NP  YVLSSGR  +N+E +
Sbjct: 155 DQSIDKEFEDFLFSNGVNPDKYVLSSGRLLLNEEAE 190


>Medtr7g062260.2 | far-red elongated hypocotyl protein, putative |
           HC | chr7:22609665-22607237 | 20130731
          Length = 192

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 123/213 (57%), Gaps = 29/213 (13%)

Query: 1   MEANFENPSQINRFCVDGLHKTDIIEWNKKRKPQSDPLDLLRPRHKCWIGNSSSEHDLIS 60
           +EA  + PSQ+NRF VD +H  +IIEWNKKRK Q   LD+LRP+HKC + + SSE   +S
Sbjct: 3   IEARTKIPSQVNRFHVDEMHDINIIEWNKKRKLQGFQLDMLRPKHKCRVESFSSEDTSMS 62

Query: 61  DENPVLEGMHMYVVKGRMDTELLDVCSEPESAKDSNSFIEDSSTSISVDSNNVKDSHSSL 120
           DE+P+    + + V  RMD   LD  SEPESAKDSNSFIEDS TS+S++           
Sbjct: 63  DESPIFGSANNHTVNSRMDVAFLDDRSEPESAKDSNSFIEDSDTSMSIN----------- 111

Query: 121 DVSASEKVCYEEDETFVDKEYNPSYHFADLNALKSLEEHFLGIGSGTDHVYSGYANEN-I 179
                E+   E D       Y+ SY   D  A K+ EEH          VY+ Y  ++  
Sbjct: 112 -----EEAKLEADSA---NTYS-SYDDLDSQAFKNPEEHL--------QVYAEYVKDSGD 154

Query: 180 EESGDKGFEDILYSKGENPTTYVLSSGRWNVNQ 212
           ++S DK FED L+S G NP  YVLSSGR  +N+
Sbjct: 155 DQSIDKEFEDFLFSNGVNPDKYVLSSGRLLLNE 187


>Medtr7g062260.3 | far-red elongated hypocotyl protein, putative |
           HC | chr7:22609665-22607237 | 20130731
          Length = 193

 Score =  134 bits (336), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/198 (42%), Positives = 111/198 (56%), Gaps = 29/198 (14%)

Query: 19  LHKTDIIEWNKKRKPQSDPLDLLRPRHKCWIGNSSSEHDLISDENPVLEGMHMYVVKGRM 78
           +H  +IIEWNKKRK Q   LD+LRP+HKC + + SSE   +SDE+P+    + + V  RM
Sbjct: 1   MHDINIIEWNKKRKLQGFQLDMLRPKHKCRVESFSSEDTSMSDESPIFGSANNHTVNSRM 60

Query: 79  DTELLDVCSEPESAKDSNSFIEDSSTSISVDSNNVKDSHSSLDVSASEKVCYEEDETFVD 138
           D   LD  SEPESAKDSNSFIEDS TS+S++     ++ S+   S               
Sbjct: 61  DVAFLDDRSEPESAKDSNSFIEDSDTSMSINEEAKLEADSANTYS--------------- 105

Query: 139 KEYNPSYHFADLNALKSLEEHFLGIGSGTDHVYSGYANEN-IEESGDKGFEDILYSKGEN 197
                SY   D  A K+ EEH          VY+ Y  ++  ++S DK FED L+S G N
Sbjct: 106 -----SYDDLDSQAFKNPEEHL--------QVYAEYVKDSGDDQSIDKEFEDFLFSNGVN 152

Query: 198 PTTYVLSSGRWNVNQEVQ 215
           P  YVLSSGR  +N+E +
Sbjct: 153 PDKYVLSSGRLLLNEEAE 170