Miyakogusa Predicted Gene
- Lj0g3v0277769.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0277769.1 tr|G7LEC2|G7LEC2_MEDTR Gamma-tubulin complex
component OS=Medicago truncatula GN=MTR_8g011450 PE=4
S,88.69,0,Spc97_Spc98,Spc97/Spc98; GAMMA-TUBULIN COMPLEX COMPONENT 2
(GCP-2),NULL; GAMMA TUBULIN COMPLEX PROTE,CUFF.18456.1
(1962 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS344433 similar to UniRef100_Q9LF43 Cluster: Spindle p... 1296 0.0
gnl|LJGI|FS333727 similar to UniRef100_Q9LF43 Cluster: Spindle p... 934 0.0
gnl|LJGI|TC71533 similar to UniRef100_A7PM75 Cluster: Chromosome... 930 0.0
gnl|LJGI|BW595650 similar to UniRef100_A7PM75 Cluster: Chromosom... 914 0.0
>gnl|LJGI|FS344433 similar to UniRef100_Q9LF43 Cluster: Spindle pole body
protein-like; n=1; Arabidopsis thaliana|Rep: Spindle
pole body protein-like - Arabidopsis thaliana (Mouse-ear
cress), partial (30%)
Length = 749
Score = 1296 bits (654), Expect = 0.0
Identities = 654/654 (100%)
Strand = Plus / Plus
Query: 1 atgaaccaatcgaccactgggtttcaaaacccaataggttattacgatccagcagttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atgaaccaatcgaccactgggtttcaaaacccaataggttattacgatccagcagttcag 155
Query: 61 gagcttattgttattgatgatgtgctctcggctatggttgcggttgaaggacgatatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gagcttattgttattgatgatgtgctctcggctatggttgcggttgaaggacgatatatt 215
Query: 121 ttaatcaaaacggttcgcggaaagaaggatgatgttactttcctggttgacccttccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ttaatcaaaacggttcgcggaaagaaggatgatgttactttcctggttgacccttccatg 275
Query: 181 gatttggcactacaggagttggcaaagcgaatatttcctctttgtaggagctatctgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gatttggcactacaggagttggcaaagcgaatatttcctctttgtaggagctatctgttg 335
Query: 241 atcaaccaatttgtggagtcaaggtctcagttccagaatggtctagttaatcatgccttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atcaaccaatttgtggagtcaaggtctcagttccagaatggtctagttaatcatgccttt 395
Query: 301 tctgctgcactgagggcacttcttatcgattaccaggccatggtggcacagcttgagcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tctgctgcactgagggcacttcttatcgattaccaggccatggtggcacagcttgagcac 455
Query: 361 caatttcgtcttgggagactttcccttcaaggattatggttctactgtcagccgatgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 caatttcgtcttgggagactttcccttcaaggattatggttctactgtcagccgatgatg 515
Query: 421 aggtcaatgcaggcattatctactgtcatacagatggcttcagtcaacaatttttctggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aggtcaatgcaggcattatctactgtcatacagatggcttcagtcaacaatttttctggt 575
Query: 481 tctgctgtgcttaacttactgcagagtcaggcaaaggctatggcgggagataatgctgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tctgctgtgcttaacttactgcagagtcaggcaaaggctatggcgggagataatgctgtc 635
Query: 541 aggttattgctagacaagatggcacaatgtgcaagtagtgcttacatgagcatattagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aggttattgctagacaagatggcacaatgtgcaagtagtgcttacatgagcatattagaa 695
Query: 601 agatgggtctatgaaggagtgatagatgatccctatggtgaatttttcatcgca 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 agatgggtctatgaaggagtgatagatgatccctatggtgaatttttcatcgca 749
>gnl|LJGI|FS333727 similar to UniRef100_Q9LF43 Cluster: Spindle pole body
protein-like; n=1; Arabidopsis thaliana|Rep: Spindle
pole body protein-like - Arabidopsis thaliana (Mouse-ear
cress), partial (27%)
Length = 824
Score = 934 bits (471), Expect = 0.0
Identities = 513/531 (96%), Gaps = 17/531 (3%)
Strand = Plus / Plus
Query: 1 atgaaccaatcgaccactgggtttcaaaacccaataggttattacgatccagcagttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atgaaccaatcgaccactgggtttcaaaacccaataggttattacgatccagcagttcag 158
Query: 61 gagcttattgttattgatgatgtgctctcggctatggttgcggttgaaggacgatatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gagcttattgttattgatgatgtgctctcggctatggttgcggttgaaggacgatatatt 218
Query: 121 ttaatcaaaacggttcgcggaaagaaggatgatgttactttcctggttgacccttccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ttaatcaaaacggttcgcggaaagaaggatgatgttactttcctggttgacccttccatg 278
Query: 181 gatttggcactacaggagttggcaaagcgaatatttcctctttgtaggagctatctgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gatttggcactacaggagttggcaaagcgaatatttcctctttgtaggagctatctgttg 338
Query: 241 atcaaccaatttgtggagtcaaggtctcagttccagaatggtctagttaatcatgccttt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 339 atcaaccaatttgtggagtcaaggtctcagttccagaatggtctagttaatcatgcctct 398
Query: 301 tctgctgcactgagggcacttcttatc-----------------gattaccaggccatgg 343
||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 399 tctgctgcactgagggcacttcttatcgtatgttttcctgaacagattaccaggccatgg 458
Query: 344 tggcacagcttgagcaccaatttcgtcttgggagactttcccttcaaggattatggttct 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tggcacagcttgagcaccaatttcgtcttgggagactttcccttcaaggattatggttct 518
Query: 404 actgtcagccgatgatgaggtcaatgcaggcattatctactgtcatacagatggcttcag 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 actgtcagccgatgatgaggtcaatgcaggcattatctactgtcatacagatggcttcag 578
Query: 464 tcaacaatttttctggttctgctgtgcttaacttactgcagagtcaggcaa 514
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tcaacaatttttctggttctgctgtgcttaacttactgcagagtcaggcaa 629
Score = 161 bits (81), Expect = 2e-38
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 509 aggcaaaggctatggcgggagataatgctgtcaggttattgctagacaagatggcacaat 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aggcaaaggctatggcgggagataatgctgtcaggttattgctagacaagatggcacaat 803
Query: 569 gtgcaagtagtgcttacatga 589
|||||||||||||||||||||
Sbjct: 804 gtgcaagtagtgcttacatga 824
>gnl|LJGI|TC71533 similar to UniRef100_A7PM75 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 682
Score = 930 bits (469), Expect = 0.0
Identities = 478/481 (99%)
Strand = Plus / Plus
Query: 1482 tagtatgcttaaatttatcaatagccttttgcactatttaacatttgaggttattgaacc 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagtatgcttaaatttatcaatagccttttgcactatttaacatttgaggttattgaacc 60
Query: 1542 caactggcatctgatgtacaacagacttcagtcagcaaatagcatagatgaggttataca 1601
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caactggcatttgatgtacaacagacttcagtcagcaaatagcatagatgaggttataca 120
Query: 1602 acatcatgattttttccttgataaatgtttgagagaatgtttacttcttttacctgagct 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acatcatgattttttccttgataaatgtttgagagaatgtttacttcttttacctgagct 180
Query: 1662 gctgaagaaggtggagaggcttaagtccatgtgccttcagtatgcagcagcaactcagtg 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctgaagaaggtggagaggcttaagtccatgtgccttcagtatgcagcagcaactcagtg 240
Query: 1722 gcttatatcatcatctattgtattacatagcccagaggaacctaatgatgattcagttag 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcttatatcatcatctattgtattacatagcccagaggaacctaatgatgattcagttag 300
Query: 1782 atccaagcaacggaaatcaggtcagatcctgaagtcaaccaccaacaatgcggcagtcac 1841
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 atccaagcaacggaaatcaggtcagatcctgaagtcaaccaccaaccatgcggcagtcac 360
Query: 1842 tgattctgttctcaaatttgagaaggaatttaatgctgaacttcagagtcttggatcagt 1901
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgattctgttttcaaatttgagaaggaatttaatgctgaacttcagagtcttggatcagt 420
Query: 1902 cttgagtagtagctcccatgcagagccgtatctggcccatcttgcacaatggattcttgg 1961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttgagtagtagctcccatgcagagccgtatctggcccatcttgcacaatggattcttgg 480
Query: 1962 t 1962
|
Sbjct: 481 t 481
>gnl|LJGI|BW595650 similar to UniRef100_A7PM75 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 486
Score = 914 bits (461), Expect = 0.0
Identities = 474/477 (99%), Gaps = 1/477 (0%)
Strand = Plus / Plus
Query: 616 ggagtgatagatgatccctatggtgaatttttcatcgcagaggacaaatctcttcaaaag 675
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 11 ggagtgatagatgatccctatggtgaatttctt-tcgcagaggacaaatctcttcaaaag 69
Query: 676 gatagtctcacccaagattatgaagctaagtattggcgacaacgttacagcctcaaagat 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gatagtctcacccaagattatgaagctaagtattggcgacaacgttacagcctcaaagat 129
Query: 736 ggaattcctagtttccttgcaaatattgcggggacaattttgaccacggggaaatatcta 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ggaattcctagtttccttgcaaatattgcggggacaattttgaccacggggaaatatcta 189
Query: 796 aatgtcatgagagagtgtgggcataatgttcaggtccctccatcagaaaattcaaaatta 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aatgtcatgagagagtgtgggcataatgttcaggtccctccatcagaaaattcaaaatta 249
Query: 856 atgagcttgggttcaaatcatcattatcttgaatgtattaaggctgcttataactttgca 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atgagcttgggttcaaatcatcattatcttgaatgtattaaggctgcttataactttgca 309
Query: 916 agtggtgaactcttgaatctcatcaaggaaaagtatgatctaaccggaaggctgcggtct 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agtggtgaactcttgaatctcatcaaggaaaagtatgatctaaccggaaggctgcggtct 369
Query: 976 ataaaacactaccttcttcttgatcagggtgatttcttagtacattttatggatattgct 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ataaaacactaccttcttcttgatcagggtgatttcttagtacattttatggatattgct 429
Query: 1036 cgagacgagctagctaaaaagcctgatgaagtctcagttgagaagctgcagtctctt 1092
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cgagacgagctagctaaaaagcctgatgaagtctcagttgagaagctgcagtctctt 486