Miyakogusa Predicted Gene

Lj0g3v0277629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277629.1 Non Chatacterized Hit- tr|J3N1K1|J3N1K1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB10G1,68.97,0.00009,seg,NULL,CUFF.18436.1
         (331 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g42070.1                                                       457   e-129
Glyma20g00390.1                                                       405   e-113

>Glyma09g42070.1 
          Length = 330

 Score =  457 bits (1176), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/321 (70%), Positives = 252/321 (78%), Gaps = 8/321 (2%)

Query: 2   MNSLLWLPEYPTTFQPGWDIE-EIHATFFKCISWQLEETLDTITCPYHYVCDRTHPADNY 60
           MN LLWLP YPT FQPGWD++ EIHATFFKCISWQ+EETLDTI CPYHY CD+T+P+ NY
Sbjct: 1   MNMLLWLPAYPT-FQPGWDLDDEIHATFFKCISWQVEETLDTINCPYHYFCDKTYPS-NY 58

Query: 61  PLAVDILVFLFTTASYFITLVIVIMDVITSGTGRGRILLSQSKRFXXXXXXXXXXXXXXA 120
           PL VDILV LFT ASY +TLVI++MD+    +GRGRI L QSKRF              A
Sbjct: 59  PLVVDILVLLFTAASYLVTLVILVMDM---SSGRGRIFLGQSKRFLLPSGPISLPLIILA 115

Query: 121 FAKGPQINTIFPLSCTGPXXXXXXXXXXXXFDNGIEPHKDIKYTFFAASTISGILHASLY 180
           FAKGPQINTIFPL+C GP            FDN  +  KD KYTFF AST+SGILHASLY
Sbjct: 116 FAKGPQINTIFPLNCIGPAILLMVLISALSFDNAAD--KDFKYTFFVASTVSGILHASLY 173

Query: 181 LDSVVLPYYTGFDALMTSTFSGECVSCICRKEALVVGGKLVRYRGWSMTTFFVVGVLCLR 240
           LDSVVLPYYTGFDALM+STFSGEC SC+CRKEALVVGGKLVRYRGWSMT FFVVGVLCLR
Sbjct: 174 LDSVVLPYYTGFDALMSSTFSGECASCVCRKEALVVGGKLVRYRGWSMTIFFVVGVLCLR 233

Query: 241 LVCKISGENAWKLMLSIKTLMKKLSWILITVDCVYLIANSPPERAMLRAAAFGSIFVLIL 300
           ++CKISGEN     L IK LM++ SWILITVDCVYL  NSPPER +LR AAFG IF+LI 
Sbjct: 234 IMCKISGENYAGKFLFIKALMERFSWILITVDCVYLTLNSPPERVVLRVAAFGGIFLLIF 293

Query: 301 LHVLKEACSQIYTLACVAEKL 321
           L  LKEACSQIY++A VAE+L
Sbjct: 294 LQALKEACSQIYSMAYVAERL 314


>Glyma20g00390.1 
          Length = 302

 Score =  405 bits (1042), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/284 (70%), Positives = 221/284 (77%), Gaps = 8/284 (2%)

Query: 2   MNSLLWLPEYPTTFQPGWDIE-EIHATFFKCISWQLEETLDTITCPYHYVCDRTHPADNY 60
           MN LLWLP YPT  QPGWD++ EIHATFFKCISWQ+EETLDT+ CPYHY CD+T+P+ NY
Sbjct: 1   MNMLLWLPAYPT-IQPGWDLDDEIHATFFKCISWQVEETLDTVNCPYHYFCDKTYPS-NY 58

Query: 61  PLAVDILVFLFTTASYFITLVIVIMDVITSGTGRGRILLSQSKRFXXXXXXXXXXXXXXA 120
           PL VDILV LFT ASYF+TL I++MD+    +GRGRI L QSKRF              A
Sbjct: 59  PLVVDILVLLFTAASYFVTLAILVMDM---SSGRGRIFLCQSKRFLLPSGPISLPLIILA 115

Query: 121 FAKGPQINTIFPLSCTGPXXXXXXXXXXXXFDNGIEPHKDIKYTFFAASTISGILHASLY 180
           FAKGPQINTIFPL+C GP            FDN  +  KD KYTFF AST+SGILHASLY
Sbjct: 116 FAKGPQINTIFPLNCIGPAILLMVLISALSFDNAAD--KDFKYTFFVASTVSGILHASLY 173

Query: 181 LDSVVLPYYTGFDALMTSTFSGECVSCICRKEALVVGGKLVRYRGWSMTTFFVVGVLCLR 240
           LDSVVLPYYTGFDALM+STFSGEC SC+CRKEAL VGGKLVRYRGWSMTTFFVVGVLCLR
Sbjct: 174 LDSVVLPYYTGFDALMSSTFSGECASCVCRKEALFVGGKLVRYRGWSMTTFFVVGVLCLR 233

Query: 241 LVCKISGENAWKLMLSIKTLMKKLSWILITVDCVYLIANSPPER 284
           +VCKISGEN     L IK LM++ SWILITVDCVYL  NSPPER
Sbjct: 234 IVCKISGENYAGKFLFIKALMERFSWILITVDCVYLTLNSPPER 277