Miyakogusa Predicted Gene

Lj0g3v0277629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277629.1 Non Characterized Hit- tr|J3N1K1|J3N1K1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB10G1,68.97,0.00009,seg,NULL,CUFF.18436.1
         (331 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g038260.1 | transmembrane protein, putative | HC | chr1:14...   442   e-124
Medtr1g038290.1 | transmembrane protein, putative | HC | chr1:14...   349   2e-96

>Medtr1g038260.1 | transmembrane protein, putative | HC |
           chr1:14195752-14194754 | 20130731
          Length = 324

 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 217/326 (66%), Positives = 252/326 (77%), Gaps = 6/326 (1%)

Query: 2   MNSLLWLPEYPTTFQPGWDIEEIHATFFKCISWQLEETLDTITCPYHYVCDRTHPADNYP 61
           MNSL+WLP+ PT FQPGWD+EEIHATFFKCISWQ+EET+D I CPYHYVCD+T+P  NY 
Sbjct: 1   MNSLIWLPKNPT-FQPGWDLEEIHATFFKCISWQMEETMDAINCPYHYVCDKTYPP-NYH 58

Query: 62  LAVDILVFLFTTASYFITLVIVIMDVITSGTGRGRILLSQSKRFXXXXXXXXXXXXXXAF 121
           L++DILV LFTT SYF+TL IVIM++I+    +G I  S SKRF               F
Sbjct: 59  LSIDILVLLFTTISYFLTLFIVIMNIISR---KGTIFFSLSKRFFLPSGPISLPLIILIF 115

Query: 122 AKGPQINTIFPLSCTGPXXXXXXXXXXXXFDNGIEPHKDIKYTFFAASTISGILHASLYL 181
            KG QINTIFPLSC GP            FDN  + +KDI+YTFFAAST+SGILHASLYL
Sbjct: 116 GKGNQINTIFPLSCIGPAILLLVLISALSFDNEAD-YKDIQYTFFAASTVSGILHASLYL 174

Query: 182 DSVVLPYYTGFDALMTSTFSGECVSCICRKEALVVGGKLVRYRGWSMTTFFVVGVLCLRL 241
           DS+VLPYYTGFDALM+ST SGEC +C+CRKEALVVGGKLV+Y+GWSMTTFFVV VLCLR+
Sbjct: 175 DSIVLPYYTGFDALMSSTLSGECATCVCRKEALVVGGKLVKYKGWSMTTFFVVSVLCLRI 234

Query: 242 VCKISGENAWKLMLSIKTLMKKLSWILITVDCVYLIANSPPERAMLRAAAFGSIFVLILL 301
           +CKI GEN  K +  IK LM++ SWILI++DCVYLIA SPPE+ MLR  AFG IF+LILL
Sbjct: 235 ICKIFGENVGKFVSMIKVLMERFSWILISLDCVYLIAKSPPEKVMLRVVAFGGIFLLILL 294

Query: 302 HVLKEACSQIYTLACVAEKLRRMPTS 327
           HVLKEACSQI  +A V EKLR +  S
Sbjct: 295 HVLKEACSQICAMAYVVEKLRLVSMS 320


>Medtr1g038290.1 | transmembrane protein, putative | HC |
           chr1:14183689-14181619 | 20130731
          Length = 322

 Score =  349 bits (895), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 181/320 (56%), Positives = 213/320 (66%), Gaps = 59/320 (18%)

Query: 8   LPEYPTTFQPGWDIEEIHATFFKCISWQLEETLDTITCPYHYVCDRTHPADNYPLAVDIL 67
           LP+ PT FQPGWD+EEIHATFFKCISWQ++ET DTI CPYHYVCD+T     YP      
Sbjct: 58  LPKNPT-FQPGWDLEEIHATFFKCISWQMQETKDTINCPYHYVCDKT-----YP------ 105

Query: 68  VFLFTTASYFITLVIVIMDVITSGTGRGRILLSQSKRFXXXXXXXXXXXXXXAFAKGPQI 127
                  +Y +++ I+                                        G QI
Sbjct: 106 ------PNYHLSIDIL----------------------------------------GNQI 119

Query: 128 NTIFPLSCTGPXXXXXXXXXXXXFDNGIEPHKDIKYTFFAASTISGILHASLYLDSVVLP 187
           NTIFPLSC GP            FDN  + +KDI+YTFFAAST+SGILHASLYLDS+ L 
Sbjct: 120 NTIFPLSCIGPAILLLVLISALSFDNEAD-YKDIQYTFFAASTVSGILHASLYLDSIALA 178

Query: 188 YYTGFDALMTSTFSGECVSCICRKEALVVGGKLVRYRGWSMTTFFVVGVLCLRLVCKISG 247
           YYTGFDALM+ST SGEC +C+CRKEAL VGGKLV+Y+GWSMTTFFV  VLCLR++C I G
Sbjct: 179 YYTGFDALMSSTLSGECATCVCRKEALAVGGKLVKYKGWSMTTFFVGSVLCLRIICTIFG 238

Query: 248 ENAWKLMLSIKTLMKKLSWILITVDCVYLIANSPPERAMLRAAAFGSIFVLILLHVLKEA 307
           EN  K +  IK LM++ SWILI++DCVYLIA SPPER MLR  AFG IF+LI+LHVLKEA
Sbjct: 239 ENVGKFVSMIKVLMERFSWILISLDCVYLIAKSPPERVMLRVVAFGCIFLLIVLHVLKEA 298

Query: 308 CSQIYTLACVAEKLRRMPTS 327
           CSQI+ +A VAEKLR +  S
Sbjct: 299 CSQIHAMAYVAEKLRLVSMS 318