Miyakogusa Predicted Gene
- Lj0g3v0276889.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0276889.1 tr|F9W2W3|F9W2W3_SOYBN Alpha-amylase OS=Glycine
max GN=AMY1 PE=4 SV=1,88.92,0,Alpha-amylase domain,Glycosyl hydrolase,
family 13, subfamily, catalytic domain; CBM_48,Glycoside
hy,NODE_40292_length_2488_cov_54.508842.path2.1
(2169 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318240 similar to UniRef100_Q4KXC5 Cluster: Starch br... 642 0.0
gnl|LJGI|TC80495 weakly similar to UniRef100_Q41059 Cluster: Sta... 581 e-165
gnl|LJGI|DC593483 similar to UniRef100_Q9XIS4 Cluster: Starch br... 149 9e-35
gnl|LJGI|BP058203 similar to UniRef100_Q41059 Cluster: Starch br... 117 3e-25
gnl|LJGI|TC68234 weakly similar to UniRef100_Q9SA59 Cluster: Non... 111 2e-23
gnl|LJGI|BP050926 similar to UniRef100_A7NWR0 Cluster: Non-speci... 105 1e-21
gnl|LJGI|TC76419 similar to UniRef100_A7NWR0 Cluster: Non-specif... 88 3e-16
>gnl|LJGI|FS318240 similar to UniRef100_Q4KXC5 Cluster: Starch branching enzyme I;
n=1; Vigna radiata|Rep: Starch branching enzyme I -
Vigna radiata, partial (13%)
Length = 705
Score = 642 bits (324), Expect = 0.0
Identities = 367/386 (95%), Gaps = 19/386 (4%)
Strand = Plus / Plus
Query: 1 atgatcacctctttcagtctccaatctttcaacattgcctctaccgctcacaactcgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgatcacctctttcagtctccaatctttcaacattgcctctaccgctcacaactcgagg 379
Query: 61 aataagcaggatctcgccaagcaaaactcagtagaattggttcttgggtatagaaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aataagcaggatctcgccaagcaaaactcagtagaattggttcttgggtatagaaatcca 439
Query: 121 aagggatgcaataggttcagtttcggatcaagaagatcaatacatgagagg--------- 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aagggatgcaataggttcagtttcggatcaagaagatcaatacatgagaggtgtgctttc 499
Query: 172 ----------gtgagcactggtttcaagggcgtagctgttattacagataacaagtcagc 221
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctacaaccaggtgagcactggtttcaagggcgtagctgttattacagataacaagtcagc 559
Query: 222 aatgtctgccactgaggaagatttagaaaatataggcatcttgcatatcgatccagccat 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatgtctgccactgaggaagatttagaaaatataggcatcttgcatatcgatccagccat 619
Query: 282 aaaaccatttaaagatcacttcaaatgtagactgaagagatatatagaccagaaaaagct 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaaaccatttaaagatcacttcaaatgtagactgaagagatatatagaccagaaaaagct 679
Query: 342 aattgaagaatatgaaggaggtcttg 367
||||||||||||||||||||||||||
Sbjct: 680 aattgaagaatatgaaggaggtcttg 705
>gnl|LJGI|TC80495 weakly similar to UniRef100_Q41059 Cluster: Starch branching enzyme
II precursor; n=1; Pisum sativum|Rep: Starch branching
enzyme II precursor - Pisum sativum (Garden pea),
partial (9%)
Length = 619
Score = 581 bits (293), Expect = e-165
Identities = 293/293 (100%)
Strand = Plus / Plus
Query: 1 atgatcacctctttcagtctccaatctttcaacattgcctctaccgctcacaactcgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atgatcacctctttcagtctccaatctttcaacattgcctctaccgctcacaactcgagg 386
Query: 61 aataagcaggatctcgccaagcaaaactcagtagaattggttcttgggtatagaaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aataagcaggatctcgccaagcaaaactcagtagaattggttcttgggtatagaaatcca 446
Query: 121 aagggatgcaataggttcagtttcggatcaagaagatcaatacatgagagggtgagcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aagggatgcaataggttcagtttcggatcaagaagatcaatacatgagagggtgagcact 506
Query: 181 ggtttcaagggcgtagctgttattacagataacaagtcagcaatgtctgccactgaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ggtttcaagggcgtagctgttattacagataacaagtcagcaatgtctgccactgaggaa 566
Query: 241 gatttagaaaatataggcatcttgcatatcgatccagccataaaaccatttaa 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gatttagaaaatataggcatcttgcatatcgatccagccataaaaccatttaa 619
>gnl|LJGI|DC593483 similar to UniRef100_Q9XIS4 Cluster: Starch branching enzyme; n=1;
Phaseolus vulgaris|Rep: Starch branching enzyme -
Phaseolus vulgaris (Kidney bean) (French bean), partial
(10%)
Length = 570
Score = 149 bits (75), Expect = 9e-35
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 2094 tggatgtgacttgcctgggaaatatagagttgcactggatagtgacgctcgggaatttgg 2153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tggatgtgacttgcctgggaaatatagagttgcactggatagtgacgctcgggaatttgg 511
Query: 2154 aggccatggaagagt 2168
|||||||||||||||
Sbjct: 510 aggccatggaagagt 496
>gnl|LJGI|BP058203 similar to UniRef100_Q41059 Cluster: Starch branching enzyme II
precursor; n=1; Pisum sativum|Rep: Starch branching
enzyme II precursor - Pisum sativum (Garden pea), partial
(10%)
Length = 581
Score = 117 bits (59), Expect = 3e-25
Identities = 59/59 (100%)
Strand = Plus / Minus
Query: 2110 gggaaatatagagttgcactggatagtgacgctcgggaatttggaggccatggaagagt 2168
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gggaaatatagagttgcactggatagtgacgctcgggaatttggaggccatggaagagt 523
>gnl|LJGI|TC68234 weakly similar to UniRef100_Q9SA59 Cluster: Non-specific
lipid-transfer protein; n=1; Arabidopsis thaliana|Rep:
Non-specific lipid-transfer protein - Arabidopsis
thaliana (Mouse-ear cress), partial (43%)
Length = 556
Score = 111 bits (56), Expect = 2e-23
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1743 gatgatacattttataaccatgtcattaggtggagagggctaccttaatttcatgggcaa 1802
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 57 gatgatacattttataaccatggcatgaggtggagagggctaccttaatttcatgggcaa 116
Query: 1803 tgag 1806
||||
Sbjct: 117 tgag 120
>gnl|LJGI|BP050926 similar to UniRef100_A7NWR0 Cluster: Non-specific lipid-transfer
protein; n=1; Vitis vinifera|Rep: Non-specific
lipid-transfer protein - Vitis vinifera (Grape), partial
(66%)
Length = 549
Score = 105 bits (53), Expect = 1e-21
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 1742 agatgatacattttataaccatgtcattaggtggagagggctaccttaatttcatgggca 1801
||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct: 451 agatgatacattttataaccatgacgtgaggtggagagggctaccttaatttcatgggca 392
Query: 1802 atgag 1806
|||||
Sbjct: 391 atgag 387
>gnl|LJGI|TC76419 similar to UniRef100_A7NWR0 Cluster: Non-specific lipid-transfer
protein; n=1; Vitis vinifera|Rep: Non-specific
lipid-transfer protein - Vitis vinifera (Grape), partial
(66%)
Length = 1199
Score = 87.7 bits (44), Expect = 3e-16
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 1743 gatgatacattttataaccatgtcattaggtggagagggctaccttaatttcatgggcaa 1802
|||||||||||||||||||||| | | |||||||||||||||||| |||||||||||||
Sbjct: 545 gatgatacattttataaccatgacgtgaggtggagagggctacctcaatttcatgggcag 604
Query: 1803 tgag 1806
||||
Sbjct: 605 tgag 608