Miyakogusa Predicted Gene
- Lj0g3v0274529.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0274529.1 Non Chatacterized Hit- tr|I1KXS3|I1KXS3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,82.72,0,RCC1_3,Regulator of chromosome condensation, RCC1;
ZF_FYVE,Zinc finger, FYVE-related; RCC1_2,Regulat,CUFF.18188.1
(869 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 900 0.0
AT1G69710.1 | Symbols: | Regulator of chromosome condensation (... 899 0.0
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 892 0.0
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 883 0.0
AT5G42140.1 | Symbols: | Regulator of chromosome condensation (... 784 0.0
AT4G14368.1 | Symbols: | Regulator of chromosome condensation (... 752 0.0
AT3G47660.1 | Symbols: | Regulator of chromosome condensation (... 742 0.0
AT3G23270.1 | Symbols: | Regulator of chromosome condensation (... 723 0.0
AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensat... 640 0.0
AT1G65920.1 | Symbols: | Regulator of chromosome condensation (... 456 e-128
AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensati... 194 2e-49
AT1G27060.1 | Symbols: | Regulator of chromosome condensation (... 150 4e-36
AT3G15430.2 | Symbols: | Regulator of chromosome condensation (... 139 8e-33
AT3G15430.1 | Symbols: | Regulator of chromosome condensation (... 139 8e-33
AT5G60870.1 | Symbols: | Regulator of chromosome condensation (... 132 1e-30
AT5G60870.2 | Symbols: | Regulator of chromosome condensation (... 125 2e-28
AT5G08710.1 | Symbols: | Regulator of chromosome condensation (... 114 2e-25
AT3G02300.1 | Symbols: | Regulator of chromosome condensation (... 114 3e-25
AT5G16040.1 | Symbols: | Regulator of chromosome condensation (... 113 5e-25
AT3G02510.1 | Symbols: | Regulator of chromosome condensation (... 113 5e-25
AT3G26100.2 | Symbols: | Regulator of chromosome condensation (... 112 1e-24
AT3G26100.1 | Symbols: | Regulator of chromosome condensation (... 108 1e-23
AT3G02510.2 | Symbols: | Regulator of chromosome condensation (... 107 2e-23
AT3G03790.1 | Symbols: | ankyrin repeat family protein / regula... 107 5e-23
AT3G03790.2 | Symbols: | ankyrin repeat family protein / regula... 107 5e-23
AT3G03790.3 | Symbols: | ankyrin repeat family protein / regula... 107 5e-23
AT5G60870.3 | Symbols: | Regulator of chromosome condensation (... 104 3e-22
AT3G55580.1 | Symbols: | Regulator of chromosome condensation (... 103 6e-22
AT1G19880.1 | Symbols: | Regulator of chromosome condensation (... 99 1e-20
AT5G11580.1 | Symbols: | Regulator of chromosome condensation (... 95 3e-19
AT3G53830.1 | Symbols: | Regulator of chromosome condensation (... 92 2e-18
AT5G48330.2 | Symbols: | Regulator of chromosome condensation (... 89 2e-17
AT5G48330.1 | Symbols: | Regulator of chromosome condensation (... 88 2e-17
AT1G42680.1 | Symbols: | P-loop containing nucleoside triphosph... 56 1e-07
AT1G20110.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 53 7e-07
AT1G61690.1 | Symbols: | phosphoinositide binding | chr1:227828... 52 3e-06
AT1G29800.2 | Symbols: | RING/FYVE/PHD-type zinc finger family ... 51 4e-06
AT1G29800.1 | Symbols: | RING/FYVE/PHD-type zinc finger family ... 51 4e-06
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/870 (55%), Positives = 578/870 (66%), Gaps = 43/870 (4%)
Query: 13 RDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEKQLRLSTVSKIIP 72
RDIEQAIT+LKKG+YLLKYGRRGKPKFCPFRLSNDES+L+W+SGKEEK L+LS VS+II
Sbjct: 20 RDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIIS 79
Query: 73 GQRTATFQRYPRPEKEYQSFSLLYNDRSLDLICKDKDEAEIWFVGLKALVARGTYNKWRF 132
GQRT FQRYPRPEKEYQSFSL+Y++RSLDLICKDKDEAE+WF GLKAL++R KWR
Sbjct: 80 GQRTPIFQRYPRPEKEYQSFSLIYDERSLDLICKDKDEAEVWFSGLKALISRCHQRKWRT 139
Query: 133 EARPDSLYSE--SPKSGTRRSPPSITPFDPGDTNG----------AAFEISSQNKWVKAF 180
E+R D SE SP++ TRRS P +PF ++ + +E +N KAF
Sbjct: 140 ESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGVDKAF 199
Query: 181 SEI----IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEAFRVXXXXXXXXXXXX 236
S++ + +AFRV
Sbjct: 200 SDMSLYAVPPKGFFPPGSATMSVHSLSSGGSDTLHGHMKGMGMDAFRVSLSSAISSSSHG 259
Query: 237 XYHEDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIG 296
H+D D LGDVF+WGE I G+LG G+ RVGS +MD++LPKALES +VLDV +I
Sbjct: 260 SGHDDGDTLGDVFMWGEGIGEGVLGGGN-HRVGSSLEIKMDSLLPKALESTIVLDVQNIA 318
Query: 297 CGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCA 356
CG +HAVLVTKQGE FSWGEES GRLGHG++ +V HPKLID L+ NIELVACGEYH+CA
Sbjct: 319 CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCA 378
Query: 357 VTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGG 416
VT SGDLYTWG G + G+LGHGNEVSHW+PKRV+ +EG+ VS ++CGP+HTA+VTS G
Sbjct: 379 VTLSGDLYTWGKG--DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAG 436
Query: 417 QLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXX 476
QLFTFGDGTFG LGHGD S IPREV++LKGLRT R +CGVWHTAAVV V+
Sbjct: 437 QLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVM-VGSSSSS 495
Query: 477 XXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVY 536
G+LFTWGDGDK +LGH D+EP+LVP CV AL N +VACGHSLT+ALTTSGHVY
Sbjct: 496 NCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 555
Query: 537 TMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNG 596
TMGS YGQLG P ADGKVPTRV+ K+ SF+E+IACG+YHVAVLTS+ EVYTWGKG NG
Sbjct: 556 TMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 615
Query: 597 QLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNPFNF 656
+LGHGD D RN PTLVE LKDKQVKS+ CGSNFTA VCLHKW +D S CSGC PFNF
Sbjct: 616 RLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNF 675
Query: 657 RRKRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDDCYNKLKKASESLPCVQTPS 716
+RKRHNCYNCGLVFC C+++KS+KA +APN +KPYRVCD C+NKLKKA E+ P +
Sbjct: 676 KRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVCDRCFNKLKKAMETDPSSHSSL 735
Query: 717 LR---------CVGLQDSRATKIQGTLLRLPSFGSIVQTESSHLKLPESHY--SHIFTAL 765
R + + T+ G L R + Q +S K + + S +
Sbjct: 736 SRRESVNQGSDAIDRDEKLDTRSDGQLARFSLLEPMRQVDSRSKKNKKYEFNSSRVSPIP 795
Query: 766 NGKLQLGGLVPPKSSNSLSGECRKHISVSEPATRIXXXXXXXXXXXXXXXXXYED----- 820
+G G L KS N G +K S S P +RI
Sbjct: 796 SGGSHRGSLNITKSFNPTFGSSKKFFSASVPGSRIASRATSPISRRPSPPRSTTPTPTLS 855
Query: 821 -------IHDDLKHRNDMLNQEVLSLRAQV 843
+ DD K ND L+QEV+ LR+QV
Sbjct: 856 GLTTPKIVVDDTKRSNDNLSQEVVMLRSQV 885
>AT1G69710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:26222325-26226530 FORWARD LENGTH=1041
Length = 1041
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/862 (53%), Positives = 586/862 (67%), Gaps = 28/862 (3%)
Query: 1 MADPQKTGVGDNRDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEK 60
MAD +T + RD+EQAITSLKKGSYLLKYGRRGKPKFCPF+L++DES L+WYSGKEEK
Sbjct: 14 MADSLRTSFSE-RDVEQAITSLKKGSYLLKYGRRGKPKFCPFQLTSDESALVWYSGKEEK 72
Query: 61 QLRLSTVSKIIPGQRTATFQRYPRPEKEYQSFSLLYNDRSLDLICKDKDEAEIWFVGLKA 120
Q++LS V +I+PGQRT TF+RYPRPEKEYQSFSL+ DRSLDLICKDKDEAE+W VGLK+
Sbjct: 73 QIKLSQVLRIVPGQRTPTFKRYPRPEKEYQSFSLICPDRSLDLICKDKDEAEVWVVGLKS 132
Query: 121 LVARGTYNKWRFEARPDSLYSESPKSGTRRSPPSITPFDPGDTNGAAFEISSQNKWVKAF 180
L+ R +KW+ +P+ +E P RR P +T D + E S+Q + K F
Sbjct: 133 LITRVKVSKWKTTIKPEITSAECPTPHARRVSPFVTILD--QVIQPSNETSTQTRLGKVF 190
Query: 181 SEIIXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXASEAFRVXXXXXXXXXXXX 236
S+I+ ++ FR+
Sbjct: 191 SDIVAITAPPSNNNQTEASGNLFCPFSPTPANVENSNLRFSTNDPFRLSLSSAVSTSSHG 250
Query: 237 XYHEDFDALGDVFIWGEDISYGIL-GSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSI 295
YHEDFDALGDVF+WGE IS G+L G+G+ S +S+ DA+LPKALES +VLD +I
Sbjct: 251 SYHEDFDALGDVFVWGESISDGVLSGTGN-----SLNSTTEDALLPKALESTIVLDAQNI 305
Query: 296 GCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTC 355
CG HAVLVTKQGEIFSWGE GG+LGHG+E D PK I ++ G+ + +ACG++HTC
Sbjct: 306 ACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTC 365
Query: 356 AVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSG 415
A+T SGDLY+WGDGTHN LLGHGNE S WIPKRV+GD++G+ VS V+CGPWHTA+V S
Sbjct: 366 AITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASS 425
Query: 416 GQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXX 475
GQLFTFGDGTFGALGHGD ST++PREVE+L GL T+V+CGVWHTAAVV V +E E
Sbjct: 426 GQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAE 485
Query: 476 XXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHV 535
G++FTWGDG+KGQLGH D + +L+PECVI+L NENI +VACGHSLT++ T+ GHV
Sbjct: 486 VDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHV 545
Query: 536 YTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLN 595
YTMGSTAYGQLG P A G P RVE I ++ +E+IACGSYHVAVLTSK+E+YTWGKGLN
Sbjct: 546 YTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLN 605
Query: 596 GQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNPFN 655
GQLGHG+ +++ +P +V FL++KQVK++ CGSNFTAV+C+HKW+P +HS C+GC NPFN
Sbjct: 606 GQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVPGSEHSLCAGCRNPFN 665
Query: 656 FRRKRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDDCYNKLKKASESLPCVQTP 715
FRRKRHNCYNCGLVFCK+C+SRKS++AALAP+ +KPYRVC C+ KLKK+ ES P T
Sbjct: 666 FRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCFTKLKKSRESSPSTPTS 725
Query: 716 SLRC---------VGLQDSRATKIQGTLLRLPSFGSIVQ-TESSHLKL---PESHYSHIF 762
R V +DS K RL S S + +E H + PE + S++F
Sbjct: 726 RTRKLLNMRKSTDVSERDSLTQKFLSVNARLSSADSSLHYSERRHHRRDLKPEVNNSNVF 785
Query: 763 TALNGKLQLGGLVPPKSSNSLSGECRKHISVSEPATRIXXXXXX-XXXXXXXXXXXYEDI 821
++NG LQ G K S +L + K++ V P + + YE
Sbjct: 786 PSMNGSLQPVGSPFSKGSTALP-KIPKNMMVKIPGSGMSSRTTSPVSVKSTSPRRSYEVA 844
Query: 822 HDDLKHRNDMLNQEVLSLRAQV 843
+ K D NQ++ L+ QV
Sbjct: 845 AAESKQLKDSFNQDMAGLKEQV 866
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/872 (54%), Positives = 577/872 (66%), Gaps = 43/872 (4%)
Query: 11 DNRDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEKQLRLSTVSKI 70
+N++ AIT+LKKG+YLLKYGRRGKPKFCPFRLSNDES+L+W+SGKEEK L+LS VS+I
Sbjct: 52 ENKNALHAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRI 111
Query: 71 IPGQRTATFQRYPRPEKEYQSFSLLYNDRSLDLICKDKDEAEIWFVGLKALVARGTYNKW 130
I GQRT FQRYPRPEKEYQSFSL+Y++RSLDLICKDKDEAE+WF GLKAL++R KW
Sbjct: 112 ISGQRTPIFQRYPRPEKEYQSFSLIYDERSLDLICKDKDEAEVWFSGLKALISRCHQRKW 171
Query: 131 RFEARPDSLYSE--SPKSGTRRSPPSITPFDPGDTNG----------AAFEISSQNKWVK 178
R E+R D SE SP++ TRRS P +PF ++ + +E +N K
Sbjct: 172 RTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGVDK 231
Query: 179 AFSEI----IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEAFRVXXXXXXXXXX 234
AFS++ + +AFRV
Sbjct: 232 AFSDMSLYAVPPKGFFPPGSATMSVHSLSSGGSDTLHGHMKGMGMDAFRVSLSSAISSSS 291
Query: 235 XXXYHEDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHS 294
H+D D LGDVF+WGE I G+LG G+ RVGS +MD++LPKALES +VLDV +
Sbjct: 292 HGSGHDDGDTLGDVFMWGEGIGEGVLGGGN-HRVGSSLEIKMDSLLPKALESTIVLDVQN 350
Query: 295 IGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHT 354
I CG +HAVLVTKQGE FSWGEES GRLGHG++ +V HPKLID L+ NIELVACGEYH+
Sbjct: 351 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHS 410
Query: 355 CAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTS 414
CAVT SGDLYTWG G + G+LGHGNEVSHW+PKRV+ +EG+ VS ++CGP+HTA+VTS
Sbjct: 411 CAVTLSGDLYTWGKG--DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTS 468
Query: 415 GGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEX 474
GQLFTFGDGTFG LGHGD S IPREV++LKGLRT R +CGVWHTAAVV V+
Sbjct: 469 AGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVM-VGSSS 527
Query: 475 XXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGH 534
G+LFTWGDGDK +LGH D+EP+LVP CV AL N +VACGHSLT+ALTTSGH
Sbjct: 528 SSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH 587
Query: 535 VYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGL 594
VYTMGS YGQLG P ADGKVPTRV+ K+ SF+E+IACG+YHVAVLTS+ EVYTWGKG
Sbjct: 588 VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGS 647
Query: 595 NGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNPF 654
NG+LGHGD D RN PTLVE LKDKQVKS+ CGSNFTA VCLHKW +D S CSGC PF
Sbjct: 648 NGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPF 707
Query: 655 NFRRKRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDDCYNKLKKASESLPCVQT 714
NF+RKRHNCYNCGLVFC C+++KS+KA +APN +KPYRVCD C+NKLKKA E+ P +
Sbjct: 708 NFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVCDRCFNKLKKAMETDPSSHS 767
Query: 715 PSLR---------CVGLQDSRATKIQGTLLRLPSFGSIVQTESSHLKLPESHY--SHIFT 763
R + + T+ G L R + Q +S K + + S +
Sbjct: 768 SLSRRESVNQGSDAIDRDEKLDTRSDGQLARFSLLEPMRQVDSRSKKNKKYEFNSSRVSP 827
Query: 764 ALNGKLQLGGLVPPKSSNSLSGECRKHISVSEPATRIXXXXXXXXXXXXXXXXXYED--- 820
+G G L KS N G +K S S P +RI
Sbjct: 828 IPSGGSHRGSLNITKSFNPTFGSSKKFFSASVPGSRIASRATSPISRRPSPPRSTTPTPT 887
Query: 821 ---------IHDDLKHRNDMLNQEVLSLRAQV 843
+ DD K ND L+QEV+ LR+QV
Sbjct: 888 LSGLTTPKIVVDDTKRSNDNLSQEVVMLRSQV 919
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/867 (54%), Positives = 577/867 (66%), Gaps = 40/867 (4%)
Query: 13 RDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEKQLRLSTVSKIIP 72
RDIEQAI +LKKG+YLLKYGRRGKPKFCPFRLSNDE++L+W+SG EEK L+LS VS+II
Sbjct: 19 RDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIWFSGNEEKHLKLSHVSRIIS 78
Query: 73 GQRTATFQRYPRPEKEYQSFSLLYNDRSLDLICKDKDEAEIWFVGLKALVARGTYNKWRF 132
GQRT FQRYPRPEKEYQSFSL+Y++RSLD+ICKDKDEAE+WF GLKAL++ R
Sbjct: 79 GQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEVWFTGLKALISHCHQRNRRT 138
Query: 133 EARPDSLYSE--SPKSGTRRSPPSITPFDPGDT---NGA-------AFEISSQNKWVKAF 180
E+R D SE SP++ TRRS P +PF D+ +G+ FE +N KAF
Sbjct: 139 ESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPFESPPKNGLDKAF 198
Query: 181 SEI-IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEAFRVXXXXXXXXXXXXXYH 239
S++ + +AFRV H
Sbjct: 199 SDMALYAVPPKGFYPSDSATISVHSGGSDSMHGHMRGMGMDAFRVSMSSAVSSSSHGSGH 258
Query: 240 EDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGY 299
+D DALGDVFIWGE I G+LG G+ +RVGS +MD++LPKALES +VLDV +I CG
Sbjct: 259 DDGDALGDVFIWGEGIGEGVLGGGN-RRVGSSFDIKMDSLLPKALESTIVLDVQNIACGG 317
Query: 300 KHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTY 359
+HAVLVTKQGE FSWGEES GRLGHG++ ++ PKLID L+ NIELVACGE+H+CAVT
Sbjct: 318 QHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTL 377
Query: 360 SGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLF 419
SGDLYTWG G + G+LGHGNEVSHW+PKRV+ +EG+ VS ++CGP+HTA+VTS GQLF
Sbjct: 378 SGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLF 435
Query: 420 TFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXX 479
TFGDGTFG LGHGD S IPREV++LKGLRT R +CGVWHTAAVV V+
Sbjct: 436 TFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVM-VGSSSSSNCS 494
Query: 480 XGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMG 539
G+LFTWGDGDKG+LGH ++EP+LVP CV AL N +VACGHSLT+ALTTSGHVYTMG
Sbjct: 495 SGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMG 554
Query: 540 STAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLG 599
S YGQLG ADGK P RVE K+ SF+E+IACG+YHVAVLTS+ EVYTWGKG NG+LG
Sbjct: 555 SPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 614
Query: 600 HGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNPFNFRRK 659
HGD D RN PTLVE LKDKQVKS+ CG+NFTA VC+H+W +D S CSGC PF+F+RK
Sbjct: 615 HGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSFKRK 674
Query: 660 RHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDDCYNKLKKASESLPCVQTPSLR- 718
RHNCYNCGLVFC CTS+KS+KA +APN +KPYRVCD C+NKLKK E+ P + R
Sbjct: 675 RHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPSSHSSLSRR 734
Query: 719 --------CVGLQDSRATKIQGTLLRLPSFGSIVQTESSHLKLPESHY--SHIFTALNGK 768
+ D ++ G L R S+ Q +S H K + + S + +G
Sbjct: 735 GSINQGSDPIDKDDKFDSRSDGQLARFSLMESMRQVDSRHKKNKKYEFNSSRVSPIPSGS 794
Query: 769 LQLGGLVPPKSSNSLSGECRKHISVSEPATRIXXXXXXXXXXXXXXXXXYED-------- 820
Q G L KS N + G +K S S P +RI
Sbjct: 795 SQRGALNIAKSFNPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLA 854
Query: 821 ----IHDDLKHRNDMLNQEVLSLRAQV 843
+ DD K ND L+QEV+ LR+QV
Sbjct: 855 TPKFVVDDTKRTNDNLSQEVVKLRSQV 881
>AT5G42140.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:16837547-16841640 REVERSE LENGTH=1073
Length = 1073
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/854 (48%), Positives = 538/854 (62%), Gaps = 39/854 (4%)
Query: 15 IEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEKQLRLSTVSKIIPGQ 74
+ QA+ +LKKG+ LLKYGR+GKPKFCPFRLSNDE+ L+W S EK+L+L+TVSKI+PGQ
Sbjct: 9 VLQALIALKKGAQLLKYGRKGKPKFCPFRLSNDETSLIWISNGGEKRLKLATVSKIVPGQ 68
Query: 75 RTATFQRYPRPEKEYQSFSLLYNDR--SLDLICKDKDEAEIWFVGLKALVARGTYNKWRF 132
RTA FQRY RP+K+Y SFSL+Y++R +LDLICKDK EAE+W GLKAL++ G + +
Sbjct: 69 RTAVFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDKVEAEVWIAGLKALIS-GQAGRSKI 127
Query: 133 EARPDS-LYSESPKSGTRRSPPSITPFDPGDTNGAAFEISSQNKWVKAFSEIIXXXXXXX 191
+ D L + T SP + + D N A +S N + +E
Sbjct: 128 DGWSDGGLSIADSRDLTLSSPTNSSVCASRDFNIADSPYNSTNFPRTSRTE--------- 178
Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXASEAFRVXXXXXXXXXXXXXYHEDFDALGDVFIW 251
S+AFRV +D DALGDV+IW
Sbjct: 179 ----NSVSSERSHVASDSPNMLVRGTGSDAFRVSVSSVQSSSSHGSAPDDCDALGDVYIW 234
Query: 252 GEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVLVTKQGEI 311
GE + + G+ + +G S D ++PK LES VVLDVH I CG KHA LV++QGE+
Sbjct: 235 GEVLCENVTKFGADKNIGYLGS-RSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEV 293
Query: 312 FSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTH 371
F+WGE SGGRLGHG+ DV P+LI++L+ +I+ VACGE+HTCAVT +G++YTWGDGTH
Sbjct: 294 FTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTH 353
Query: 372 NSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGH 431
N+GLLGHG +VSHWIPKR+SG +EG++++ VSCGPWHTA++TS GQLFTFGDGTFG LGH
Sbjct: 354 NAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGH 413
Query: 432 GDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDK 491
GD + PREVE+L GLRT V+CGVWH AA+V VI G+LFTWGDGDK
Sbjct: 414 GDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVI--VTHSSSSVSSGKLFTWGDGDK 471
Query: 492 GQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPA 551
+LGH D+EPRL P CV AL + +RVACGHSLT+ LTTSG VYTMGST YGQLG P A
Sbjct: 472 SRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA 531
Query: 552 DGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTL 611
DGK+P VEDK+ +E+IACG+YHVAVLTS+ EV+TWGKG NG+LGHGD + R PTL
Sbjct: 532 DGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTL 591
Query: 612 VEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNPFNFRRKRHNCYNCGLVFC 671
V+ LK++ VK++ CGSNFTA +CLHKW+ + S CS C F F RKRHNCYNCGLV C
Sbjct: 592 VDALKERHVKNIACGSNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHC 651
Query: 672 KLCTSRKSMKAALAPNSSKPYRVCDDCYNKLKKASES-LPCVQTPSLRCVGLQDSRATKI 730
C+S+KS+KAALAPN KPYRVCD C++KL K SE+ + + R G R K
Sbjct: 652 HSCSSKKSLKAALAPNPGKPYRVCDSCHSKLSKVSEANIDSRKNVMPRLSGENKDRLDKT 711
Query: 731 QGTLLR--LPSFGSIVQ---TESSHLKLPESHYSHIFTALNGKLQLGGLV---------P 776
+ L + +PS +++ ++ +S + T+ QL + P
Sbjct: 712 EIRLAKSGIPSNIDLIKQLDNRAARQGKKADTFSLVRTSQTPLTQLKDALTNVADLRRGP 771
Query: 777 PKSSNSLSGECRKHISVSEPATRIXXXXXXXXXXXXXXXXXYEDIHDDLKHRNDMLNQEV 836
PK + + S VS + R I + LK N++LNQEV
Sbjct: 772 PKPAVTPSSS----RPVSPFSRRSSPPRSVTPIPLNVGLGFSTSIAESLKKTNELLNQEV 827
Query: 837 LSLRAQVCWIKILC 850
+ LRAQ ++ C
Sbjct: 828 VRLRAQAESLRHRC 841
>AT4G14368.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr4:8274279-8278810 REVERSE
LENGTH=1106
Length = 1106
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/707 (51%), Positives = 485/707 (68%), Gaps = 36/707 (5%)
Query: 1 MADPQKTGVGDNRDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEK 60
MADP + V +RDI+QA+ SLKKG+ LLKY R+G+PKF FRLS DE+ L W S EEK
Sbjct: 6 MADPS-SYVNHDRDIDQALVSLKKGTQLLKYSRKGRPKFRSFRLSPDETTLFWLSHGEEK 64
Query: 61 QLRLSTVSKIIPGQRTATFQRYPRPEKEYQSFSLLYN--DRSLDLICKDKDEAEIWFVGL 118
L+L+TVS+I+PGQRTA F+RY RPEK+Y SFSL+Y+ DRSLDLICKDK E E+WF GL
Sbjct: 65 GLKLATVSRILPGQRTAVFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEVWFAGL 124
Query: 119 KALVARGTYNKWRFEARPDSLYSESPKSGTRRSPPSITPFDPGDTNGA--AFEISSQNKW 176
K+L+ + + + E S++ S R S SI F P +T + ++ QN
Sbjct: 125 KSLIRQNRNKQAKSEIPEVSIHDSDCFSTGRPSTASID-FAPNNTRRGRTSIDLGIQNSP 183
Query: 177 VKAFSEIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEAFRVXXXXXXXXXXXX 236
K S + +++ FR+
Sbjct: 184 TKFGSSDVGYERGNMLRP-----------------------STDGFRISVSSTPSCSTGT 220
Query: 237 XYHEDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIG 296
+D ++LGDV++WGE S GI G V + ++ ++D ++PK LES VVLDVH I
Sbjct: 221 SGPDDIESLGDVYVWGEVWSDGISPDG----VVNSTTVKIDVLIPKPLESNVVLDVHQIA 276
Query: 297 CGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCA 356
CG +H LVT+QGE+F+W EE+GGRLGHGI+VDV PKL++ L+ NI+ VACGEYHTCA
Sbjct: 277 CGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCA 336
Query: 357 VTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGG 416
V+ SGDL+TWGDG HN GLLGHG+++SHWIPKRVSG +EG++V V+CG WH+A+ T+ G
Sbjct: 337 VSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANG 396
Query: 417 QLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXX 476
+LFTFGDG FG LGHGD S + P+EV+ L GL+T +V+CGVWHT A+V V+++
Sbjct: 397 KLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQ---TGT 453
Query: 477 XXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVY 536
+LFTWGDGDK +LGH ++E L+P CV +L + N ++ACGH+ T+ALTTSGHV+
Sbjct: 454 STSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVF 513
Query: 537 TMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNG 596
TMG T++GQLG +DGK+P V+D++ F+E+I+CG +HVAVLTS++EV+TWGKG NG
Sbjct: 514 TMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNG 573
Query: 597 QLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNPFNF 656
+LGHGD D R PTLVE L+++ VKS+ CGSNFT+ +C+HKW+ D S CSGC F F
Sbjct: 574 RLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSSICIHKWVSGADQSVCSGCRQAFGF 633
Query: 657 RRKRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDDCYNKLK 703
RKRHNCYNCGLV C C+S+K++KAALAP KP+RVCD CY KLK
Sbjct: 634 TRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLK 680
>AT3G47660.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:17571192-17574805 FORWARD
LENGTH=954
Length = 954
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/762 (50%), Positives = 483/762 (63%), Gaps = 34/762 (4%)
Query: 9 VGDNRDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEKQLRLSTVS 68
V +R+ EQAI LKKG+YLLKYGRRGKPKF PFRLS+DE LLWY GK+EK+L+LS+V+
Sbjct: 11 VPTDRENEQAIAILKKGAYLLKYGRRGKPKFYPFRLSSDEIYLLWYCGKKEKRLKLSSVT 70
Query: 69 KIIPGQRTATFQRYPRPEKEYQSFSLLYNDRSLDLICKDKDEAEIWFVGLKALVARGTYN 128
+IIPGQRTA F+RYP+P KEYQSFSL+Y +RSLDL DKDEAE W L+AL++R +
Sbjct: 71 RIIPGQRTAVFRRYPQPTKEYQSFSLIYGERSLDL---DKDEAEFWLTTLRALLSRNNSS 127
Query: 129 KWRFEARPDSLYSESPKSGTR--------RSPPSITPFDPGDTNGAAFEISSQNKWVKAF 180
+R SL E+ + + RS S T ++ + ++ + K F
Sbjct: 128 ALVLHSRSRSLAPENGEQSSSSQNSKSNIRSVSSDTSYEEHAKKASGSHCNTPQRLGKVF 187
Query: 181 SEIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAS---EAFRVXXXXXXXXXXXXX 237
SE++ +S + +
Sbjct: 188 SEVLSQTAVLKALSLDELVHKPHTSPPETIENRPTNHSSPGVDTSKYSISSAVSSSSQGS 247
Query: 238 YHEDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGC 297
ED +L DVF+WGE I G+LG G M + GS SS D+ LPK L+S V LD SI C
Sbjct: 248 TFEDLKSLCDVFVWGESIGDGLLGGG-MHKSGSSSSLMTDSFLPKVLKSHVALDAQSISC 306
Query: 298 GYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAV 357
G +AVLVTKQG+++SWGEESGGRLGHG+ V HPKLID +G +EL CGE+HTCAV
Sbjct: 307 GTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAV 366
Query: 358 TYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQ 417
T SGDLY WGDG HN+GLLG G+ SHW P R+ G +EG+ V +SCGPWHTA VTS G+
Sbjct: 367 TASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGK 426
Query: 418 LFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXX 477
LFTFGDGTFGALGHGD STNIPREVE L G RT + +CGVWH+AAVV V E
Sbjct: 427 LFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATS---- 482
Query: 478 XXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYT 537
G+LFTWGDGD G+LGH D E RL+P CV L + +VACG S+T+AL+ SG VY
Sbjct: 483 --SGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYA 540
Query: 538 MGSTAYGQLGCPPAD-GKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNG 596
MG+ P D + P+ +E + SF++++ACG +H+AVL SKAEVYTWGKG NG
Sbjct: 541 MGTAD------PSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNG 594
Query: 597 QLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNPFNF 656
QLGHGD ++R PTLV+ LK KQV+ VVCGSN+TA +CLHK I D + CSGC +PFN+
Sbjct: 595 QLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCRHPFNY 654
Query: 657 RRKRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDDCYNKLKKASESLPC----- 711
RK HNCYNCG VFC CTS+KS+ AA+AP +++PYRVCDDCY KL+ ESL
Sbjct: 655 MRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLATPANSA 714
Query: 712 -VQTPSLRCVGLQDSRATKIQGTLLRLPSFGSIVQTESSHLK 752
SL D Q LLR+ SF QT+ + LK
Sbjct: 715 RFSNASLPSSYEMDEIGITPQRQLLRVDSFDFFRQTKHADLK 756
>AT3G23270.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr3:8316436-8320337 FORWARD LENGTH=1045
Length = 1045
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/707 (49%), Positives = 466/707 (65%), Gaps = 46/707 (6%)
Query: 1 MADPQKTGVGDNRDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEK 60
MADP + RD++QA+ LKKG+ LLKY R+GKPKF FRLS DE L+W+S EEK
Sbjct: 1 MADPASCYIYHERDVDQALVVLKKGTQLLKYSRKGKPKFRAFRLSPDEKTLIWFSRGEEK 60
Query: 61 QLRLSTVSKIIPGQRTATFQRYPRPEKEYQSFSLLYN--DRSLDLICKDKDEAEIWFVGL 118
L+L VS+I+PGQRT R+ RPEK++ SFSLLYN +RSLDLICKDK E E+WF L
Sbjct: 61 GLKLFEVSRIVPGQRT----RFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAAL 116
Query: 119 KALVARGTYNKWRFEARPDSLYSESPKSGTRRSPPSITPFDPGDTNGAAFEISSQNKWVK 178
K L+ KS RR+ I DT F + Q+
Sbjct: 117 KFLIE---------------------KSRNRRARSEIPEIHDSDT----FSVGRQS---- 147
Query: 179 AFSEIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEAFRVXXXXXXXXXXXXXY 238
I +++ FR+
Sbjct: 148 ----IDFVPSNIPRGRTSIDLGYQNNSDVGYERGNMLRPSTDGFRISVSSTPSCSSGGSG 203
Query: 239 HEDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCG 298
+D ++LGDV++WGE + GIL G+ S + + D + P+ LES VVLDVH I CG
Sbjct: 204 PDDIESLGDVYVWGEVWTEGILPDGT----ASNETVKTDVLTPRPLESNVVLDVHQIVCG 259
Query: 299 YKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVT 358
+H LVT+QGE+F+WGEE GGRLGHGI+VD+ PKL++ L+ NI+ VACGEYHTC V+
Sbjct: 260 VRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVS 319
Query: 359 YSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQL 418
SGDL++WGDG HN GLLGHG+++SHWIPKRVSG +EG++V V+CG WH+A+ T+ G+L
Sbjct: 320 TSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKL 379
Query: 419 FTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXX 478
FTFGDG FG LGHG+ S + P+EV++L GL+T +V+C +WHTAA+V V+ +
Sbjct: 380 FTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSR 439
Query: 479 XXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTM 538
+LFTWGDGDK +LGH ++E L+P CV +L + N +++ACGH+ T+ALTTSGHV+TM
Sbjct: 440 ---KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTM 496
Query: 539 GSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQL 598
G TA+GQLG +DGK+P V+D++ F+E+IACG++HVAVLTS++EV+TWGKG NG+L
Sbjct: 497 GGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRL 556
Query: 599 GHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNPFNFRR 658
GHGD + + PTLVE L+D+ VKS+ CGSNFT+ +C+HKW+ D S CSGC F F R
Sbjct: 557 GHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFGFTR 616
Query: 659 KRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDDCYNKLKKA 705
KRHNCYNCGLV C C+S+K++KAALAP KP+RVCD CY+KLK A
Sbjct: 617 KRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYSKLKAA 663
>AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:28906952-28911325 FORWARD LENGTH=1103
Length = 1103
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/649 (50%), Positives = 423/649 (65%), Gaps = 34/649 (5%)
Query: 219 SEAFRVXXXXXXXXXXXXXYHEDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDA 278
S+ FRV +D DALGDV+IWGE I ++ G + + S ++ D
Sbjct: 211 SDGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVG-IDKNASYLTTRTDV 269
Query: 279 ILPKALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDT 338
++PK LES +VLDVH I CG +HA VT+QGEIF+WGEESGGRLGHGI DVFHP+L+++
Sbjct: 270 LVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVES 329
Query: 339 LSGMN-IELVACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGV 397
L+ + ++ VACGE+HTCAVT +G+LYTWGDGTHN GLLGHG+++SHWIPKR++G +EG+
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGL 389
Query: 398 RVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCG 457
V+ VSCGPWHTA++TS G+LFTFGDGTFG LGHGD + PREVE+L GLRT VSCG
Sbjct: 390 HVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCG 449
Query: 458 VWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIY 517
VWHTAAVV +I G+LFTWGDGDK +LGH D++PRL P CV AL + N +
Sbjct: 450 VWHTAAVVEII-VTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFH 508
Query: 518 RVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYH 577
++ACGHSLT+ LTTSG V+TMGST YGQLG DGK+P VEDK+A F+E+I+CG+YH
Sbjct: 509 KIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYH 568
Query: 578 VAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHK 637
VA LTS+ EVYTWGKG NG+LGHGD + R PT+VE LKD+ VK + CGSN+TA +CLHK
Sbjct: 569 VAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHK 628
Query: 638 WIPSVDHSCCSGCHNPFNFRRKRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDD 697
W+ + S CS C F F RKRHNCYNCGLV C C+S+K+ +AALAP++ + YRVCD
Sbjct: 629 WVSGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDS 688
Query: 698 CYNKLKKASESLPCVQTPSL--RCVGLQDSRATKIQGTLLRLPSFGS-----IVQTESSH 750
CY KL K SE + S R G R K + +RL FG+ I Q +S
Sbjct: 689 CYVKLSKVSEINDTNRRNSAVPRLSGENRDRLDKSE---IRLAKFGTSNMDLIKQLDSKA 745
Query: 751 LKLPESHYSHIF-----TALNGKLQLGGLV----------PPKSSNSLSGECRKHISVSE 795
K + + F + L LQL V PK + + SG + +S
Sbjct: 746 AK--QGKKTDTFSLGRNSQLPSLLQLKDAVQSNIGDMRRATPKLAQAPSGISSRSVS--- 800
Query: 796 PATRIXXXXXXXXXXXXXXXXXYE-DIHDDLKHRNDMLNQEVLSLRAQV 843
P +R + I D++K N++LNQE++ LR QV
Sbjct: 801 PFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQV 849
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/116 (66%), Positives = 95/116 (81%), Gaps = 2/116 (1%)
Query: 12 NRDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEKQLRLSTVSKII 71
+ ++EQA+ +LKKG+ LLKYGR+GKPKF PFRLS+DE L+W S EK+L+L++VSKI+
Sbjct: 11 DHNLEQALITLKKGTQLLKYGRKGKPKFYPFRLSSDEKSLIWISSSGEKRLKLASVSKIV 70
Query: 72 PGQRTATFQRYPRPEKEYQSFSLLYN--DRSLDLICKDKDEAEIWFVGLKALVARG 125
PGQRTA FQRY RPEK+Y SFSLLYN +SLDLICKDK EAEIW GLK L++ G
Sbjct: 71 PGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLKTLISTG 126
>AT1G65920.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:24525267-24529204 REVERSE LENGTH=1006
Length = 1006
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/521 (45%), Positives = 325/521 (62%), Gaps = 33/521 (6%)
Query: 243 DALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHA 302
+ L D+ IWG I+ I GS ++ DA+ PK LES + DV SI G KHA
Sbjct: 256 NVLKDIMIWGA-ITGLIDGS----------KNQNDALSPKLLESATMFDVQSISLGAKHA 304
Query: 303 VLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGD 362
LVT+QGE+F WG + G+LG + +D+ HPK +++L + + VAC ++ TCAVT SG+
Sbjct: 305 ALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGE 364
Query: 363 LYTWG-DG--THNSGLLGHGNEVSHWIPKRVSGDIEG-VRVSYVSCGPWHTAIVTSGGQL 418
LY WG DG SG S ++ +++S + G + V V+CG WHTAIVTS GQL
Sbjct: 365 LYLWGIDGGTIEQSG--------SQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQL 416
Query: 419 FTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXX 478
FT+G GTFG LGHG S P+EVE+L+ ++ VSCG WHTAA+V ++ +
Sbjct: 417 FTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETAND-RKFYNAK 475
Query: 479 XXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTM 538
G+LFTWGDGDKG+LGH D + +LVP CV L + + +V+CG +LT+AL+ SG VYTM
Sbjct: 476 SCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTM 535
Query: 539 GSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQL 598
GS+ +GQLGCP A K V + F++DIA GS+HVAVLTS VYTWGKG+NGQL
Sbjct: 536 GSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQL 595
Query: 599 GHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNPFNFRR 658
G GD RN P LVE L D+ V+S+ CG N TA +CLHK I D + CS C + F F R
Sbjct: 596 GLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLNDQTACSSCKSAFGFTR 655
Query: 659 KRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDDCYNKLKKASESLPCVQTPSLR 718
++HNCYNCGL+FC C+S+K++ A+LAPN SK RVCD C++ L +E V+
Sbjct: 656 RKHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSITEFSRNVK----- 710
Query: 719 CVGLQDSRATKIQGTLLRLPSFGSIVQTESSHLKLPESHYS 759
D+ ++Q R+ + Q+E+ LP+++ S
Sbjct: 711 ----MDNHTPRMQMVTRRVSEDLTEKQSENEMQNLPQANRS 747
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 88/118 (74%), Gaps = 2/118 (1%)
Query: 9 VGDNRDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEKQLRLSTVS 68
V +R EQAI +LKKG+ LLK RRG PKFCPF+LS DE L+WYSG+EE+QLRLS+V
Sbjct: 10 VPRDRTDEQAILALKKGAQLLKCRRRGNPKFCPFKLSMDEKYLIWYSGEEERQLRLSSVI 69
Query: 69 KIIPGQRTATFQRYPRPEKEYQSFSLLY--NDRSLDLICKDKDEAEIWFVGLKALVAR 124
I+ GQ T FQ+ + +++ QSFSL+Y + +LDLICKDK +A+ WF GL+A++ +
Sbjct: 70 TIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVITK 127
>AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensation
(RCC1) family protein | chr5:25554821-25558587 REVERSE
LENGTH=440
Length = 440
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 177/338 (52%), Gaps = 34/338 (10%)
Query: 289 VLDVH---SIGCGYKHAVLVTKQG-EIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNI 344
LD H S+ CG H V ++ G E++SWG GRLGHG D+F P I L G+ I
Sbjct: 63 ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRI 122
Query: 345 ELVACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSC 404
+ +ACG+ H AVT G++ +WG + +G LG G+ +P+++ EG+R+ V+
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAA 179
Query: 405 GPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAV 464
G HTA VT G L+ +G G +G LG GD + +P V + G + + V+CG HT +V
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 239
Query: 465 VGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHS 524
G L+T+G GQLGH D E L+P + AL N I +++ G
Sbjct: 240 -------------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWR 286
Query: 525 LTIALTTSGHVYTMGSTAYGQLG-------CPPADGKVPTRVEDKIADSFIEDIACGSYH 577
T+ALT+ G +Y G +GQ+G C P + P D + ++CG H
Sbjct: 287 HTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD-------DQKVVQVSCGWRH 339
Query: 578 VAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFL 615
+T + V+ WG+G NGQLG G++ RN P ++E L
Sbjct: 340 TLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 176/341 (51%), Gaps = 19/341 (5%)
Query: 295 IGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHT 354
I G H+V + + SWG G+LGHG D P + L G I V CG HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 355 CAVTYSG-DLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVT 413
A + SG ++Y+WG G + G LGHGN + P + + G+R+ ++CG H VT
Sbjct: 80 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136
Query: 414 SGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVE 473
G++ ++G G LG GD + +P++++ +G+R V+ G HTAAV
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT-------- 188
Query: 474 XXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSG 533
G L+ WG G G LG DR RLVPE V + G E + VACG TI+++ SG
Sbjct: 189 -----EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSG 243
Query: 534 HVYTMGSTAYGQLG-CPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGK 592
+YT G + YGQLG D +P ++E +++SFI I+ G H LTS ++Y WG
Sbjct: 244 ALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGW 302
Query: 593 GLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVV 633
GQ+G G+N + P V F D++V V CG T V
Sbjct: 303 NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 158/317 (49%), Gaps = 24/317 (7%)
Query: 261 GSGSMQRVGSRSSSEMDAILP-KALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESG 319
G G R+G +SS++ LP KAL + + I CG H + VT +GE+ SWG
Sbjct: 93 GWGDFGRLGHGNSSDLFTPLPIKALHG---IRIKQIACGDSHCLAVTMEGEVQSWGRNQN 149
Query: 320 GRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHG 379
G+LG G D P+ I G+ I++VA G HT AVT GDLY WG G + G LG G
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRY--GNLGLG 207
Query: 380 NEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNI 439
+ +P+RV+ G ++S V+CG HT V+ G L+T+G +G LGHGD I
Sbjct: 208 DRTDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 440 PREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDR 499
P ++E L +++S G HT A+ G+L+ WG GQ+G +
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALT-------------SDGKLYGWGWNKFGQVGVGNN 313
Query: 500 EPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRV 559
+ P V ++ + +V+CG T+A+T +V+ G GQLG G+ R
Sbjct: 314 LDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI----GESVDRN 369
Query: 560 EDKIADSFIEDIACGSY 576
KI ++ D A G +
Sbjct: 370 FPKIIEALSVDGASGQH 386
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 108/237 (45%), Gaps = 14/237 (5%)
Query: 398 RVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCG 457
+V +S G H+ + SG + ++G G G LGHGD P ++ L G + V+CG
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 458 VWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIY 517
HT A +++WG GD G+LGH + P + AL I
Sbjct: 76 ADHTVAY------------SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIK 123
Query: 518 RVACGHSLTIALTTSGHVYTMGSTAYGQLGC-PPADGKVPTRVEDKIADSFIEDIACGSY 576
++ACG S +A+T G V + G GQLG D VP +++ I+ +A G+
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAE 182
Query: 577 HVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVV 633
H A +T ++Y WG G G LG GD R P V +++ V CG T V
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 239
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 519 VACGHSLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYH- 577
++ G S ++AL + V + G GQLG A+ + + I + CG+ H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 578 VAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCL 635
VA S EVY+WG G G+LGHG++ P ++ L ++K + CG + V +
Sbjct: 80 VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
>AT1G27060.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:9395023-9396673 FORWARD
LENGTH=386
Length = 386
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 183/382 (47%), Gaps = 36/382 (9%)
Query: 261 GSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESGG 320
G+G+ ++G+ + D +LP+ L + + + CG H + +T G++F+WG S G
Sbjct: 21 GAGTDGQLGT--TKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSG 78
Query: 321 RLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGN 380
+LGHG +++ PKL+ I A G H+ V+ SG ++T G+G+ G LGHG+
Sbjct: 79 QLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSF--GQLGHGD 136
Query: 381 EVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDH--SSTN 438
+S P +VS V V+CG H+ ++ +G Q+ FG G G LG S N
Sbjct: 137 TLSLSTPAKVS-HFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVN 195
Query: 439 IPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVD 498
+P V LK + R+S H+AA+ G+ F+WG G G G
Sbjct: 196 LPCVVSGLKDVEVVRISANGDHSAAI-------------SADGQFFSWGRGFCG--GPDV 240
Query: 499 REPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTR 558
P+ +P + + VA G + + LT G V+ +GST Q
Sbjct: 241 HAPQSLPSPL------SFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEA 294
Query: 559 VEDKIAD---SFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEF- 614
+ +K+ D + IA G+ H A +T EV TWG G +GQLG G+ + + P LV
Sbjct: 295 LFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLG 354
Query: 615 ---LKDKQVKSVVCGSNFTAVV 633
L+ K++K V CGS FT V
Sbjct: 355 SIDLRTKEIK-VYCGSGFTYAV 375
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 73/152 (48%)
Query: 482 RLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGST 541
++++WG G GQLG + L+P+ + +I +ACG + IALT+ G V+T G
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75
Query: 542 AYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHG 601
+ GQLG ++ DS I A G H ++ ++T G G GQLGHG
Sbjct: 76 SSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHG 135
Query: 602 DNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVV 633
D + P V + VK V CG + V+
Sbjct: 136 DTLSLSTPAKVSHFNNDSVKMVACGMRHSLVL 167
>AT3G15430.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 173/394 (43%), Gaps = 32/394 (8%)
Query: 238 YHEDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGC 297
YH V+ G +S G+L GS +++ A P +E V +
Sbjct: 121 YHTLLINNSKVYSCGVSLS-GVLAHGS-------ETTQCVAFTP--IEFPFPAQVAQVSA 170
Query: 298 GYKHAVLVTKQGEIFSWGEESGGRLGH-GIEVDVFHPKLIDTLSGMNIELVACGEYHTCA 356
H+ V + G++ + G+ S GH +F PKL++ L G + VA G + T
Sbjct: 171 TQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVF 230
Query: 357 VTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGG 416
++ G YT G TH G LGHG+ + +PK V V ++ GP + VT G
Sbjct: 231 LSREGHAYTCGSNTH--GQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDG 288
Query: 417 QLFTFGDGTFGALGHGDHSSTNIPREVETLK--GLRTTRVSCGVWHTAAVVGVIDECVEX 474
+++FG G+ LGHG+ PR ++ K G+ RVS G H A+
Sbjct: 289 SVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL---------- 338
Query: 475 XXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGH 534
GR++TWG G G LGH D ++ P+ ++ L N +V T L G
Sbjct: 339 ---DSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGL 395
Query: 535 VYTMGSTAYGQLGCPP---ADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWG 591
+Y G +G LG P +D + RV + + + ++ G YH V+T + ++ +G
Sbjct: 396 LYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFG 455
Query: 592 KGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVC 625
QLGH +PT + FL + +S +C
Sbjct: 456 DNERAQLGHDSLRGCLEPTEI-FLHCGRSRSRLC 488
>AT3G15430.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 173/394 (43%), Gaps = 32/394 (8%)
Query: 238 YHEDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGC 297
YH V+ G +S G+L GS +++ A P +E V +
Sbjct: 121 YHTLLINNSKVYSCGVSLS-GVLAHGS-------ETTQCVAFTP--IEFPFPAQVAQVSA 170
Query: 298 GYKHAVLVTKQGEIFSWGEESGGRLGH-GIEVDVFHPKLIDTLSGMNIELVACGEYHTCA 356
H+ V + G++ + G+ S GH +F PKL++ L G + VA G + T
Sbjct: 171 TQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVF 230
Query: 357 VTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGG 416
++ G YT G TH G LGHG+ + +PK V V ++ GP + VT G
Sbjct: 231 LSREGHAYTCGSNTH--GQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDG 288
Query: 417 QLFTFGDGTFGALGHGDHSSTNIPREVETLK--GLRTTRVSCGVWHTAAVVGVIDECVEX 474
+++FG G+ LGHG+ PR ++ K G+ RVS G H A+
Sbjct: 289 SVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL---------- 338
Query: 475 XXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGH 534
GR++TWG G G LGH D ++ P+ ++ L N +V T L G
Sbjct: 339 ---DSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGL 395
Query: 535 VYTMGSTAYGQLGCPP---ADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWG 591
+Y G +G LG P +D + RV + + + ++ G YH V+T + ++ +G
Sbjct: 396 LYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFG 455
Query: 592 KGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVC 625
QLGH +PT + FL + +S +C
Sbjct: 456 DNERAQLGHDSLRGCLEPTEI-FLHCGRSRSRLC 488
>AT5G60870.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487771 REVERSE
LENGTH=445
Length = 445
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 166/363 (45%), Gaps = 44/363 (12%)
Query: 238 YHEDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGC 297
+H GD++IWG+ G G G +S + + P + + HSI C
Sbjct: 111 FHSGLTIDGDLWIWGK-------GDGGRLGFGQENSVFVPNLNP-------LFEEHSIRC 156
Query: 298 ---GYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHT 354
G H+V +T QG++F+WG G LGH + P+ +D I +A HT
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHT 216
Query: 355 CAVTYSGDLYTW----GDGTHNSGLLGHGNEVSHW-IPKRVSGDIEGVRVSYVSCGPWHT 409
A+T SG+LY W GDG G NE +P +V V V+ VSCG + T
Sbjct: 217 AAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFT 274
Query: 410 AIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVID 469
+T GQL+ +G + LG GD+ P V +L+G+R T+++CG +H+ A+
Sbjct: 275 MALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALT---- 330
Query: 470 ECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIAL 529
G++ +WG G GQLG + VP + AL ++ I +A G S + A+
Sbjct: 331 ---------EEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 381
Query: 530 TTSGHVYTMGSTAYGQLGCP--PADGKVPTRV-----EDKIADSFIEDIACGSYHVAVLT 582
T G ++ G+ QLG P P P V ED+ + I+ G+ H L
Sbjct: 382 TDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLV 441
Query: 583 SKA 585
S++
Sbjct: 442 SRS 444
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 158/333 (47%), Gaps = 28/333 (8%)
Query: 295 IGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHT 354
I CG H+ L T G+++ WG+ GGRLG G E VF P L +I +A G H+
Sbjct: 106 ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164
Query: 355 CAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTS 414
A+T+ GD++TWG G G LGH +P+RV D ++S ++ HTA +T
Sbjct: 165 VALTHQGDVFTWGYGGF--GALGHKVYTRELVPRRVD-DSWDCKISAIATSGTHTAAITE 221
Query: 415 GGQLFTFG-------DGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGV 467
G+L+ +G G G + ++P +V+ L + VSCG + T A+
Sbjct: 222 SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALT-- 278
Query: 468 IDECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTI 527
G+L+ WG +LG D P V +L I ++ACG ++
Sbjct: 279 -----------KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSL 327
Query: 528 ALTTSGHVYTMGSTAYGQLGCPPA-DGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAE 586
ALT G V + G +GQLG + KVPT +E +AD I IA G A +T E
Sbjct: 328 ALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIE-ALADKKIVFIASGGSSSAAITDGGE 386
Query: 587 VYTWGKGLNGQLG-HGDNDHRNKPTLVEFLKDK 618
++ WG + QLG G + + P V FL ++
Sbjct: 387 LWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEE 419
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 161/351 (45%), Gaps = 45/351 (12%)
Query: 310 EIFSWGEESGGRLGHGIEVDVFHPKLIDTL---SGMNIEL-----------------VAC 349
++FSWG + G+LG GIE +P + L S + L ++C
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108
Query: 350 GEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHT 409
G +H+ +T GDL+ WG G + G LG G E S ++P ++ E + ++ G H+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLHS 164
Query: 410 AIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVID 469
+T G +FT+G G FGALGH ++ +PR V+ + + ++ HTAA+
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAIT---- 220
Query: 470 ECVEXXXXXXXGRLFTWG--DGDKGQLGHVDREPR-----LVPECVIALGNENIYRVACG 522
G L+ WG +GD R P VP V AL + V+CG
Sbjct: 221 ---------ESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKAL-TVPVASVSCG 270
Query: 523 HSLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLT 582
T+ALT G ++ G+ + +LG G + I IACG YH LT
Sbjct: 271 GFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALT 330
Query: 583 SKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVV 633
+ +V +WG G +GQLG ++ PT +E L DK++ + G + +A +
Sbjct: 331 EEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 381
>AT5G60870.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487564 REVERSE
LENGTH=383
Length = 383
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 166/370 (44%), Gaps = 51/370 (13%)
Query: 238 YHEDFDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGC 297
+H GD++IWG+ G G G +S + + P + + HSI C
Sbjct: 42 FHSGLTIDGDLWIWGK-------GDGGRLGFGQENSVFVPNLNP-------LFEEHSIRC 87
Query: 298 ---GYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHT 354
G H+V +T QG++F+WG G LGH + P+ +D I +A HT
Sbjct: 88 IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHT 147
Query: 355 CAVTYSGDLYTW----GDGTHNSGLLGHGNEVSHW-IPKRVSGDIEGVRVSYVSCGPWHT 409
A+T SG+LY W GDG G NE +P +V V V+ VSCG + T
Sbjct: 148 AAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFT 205
Query: 410 AIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVID 469
+T GQL+ +G + LG GD+ P V +L+G+R T+++CG +H+ A+
Sbjct: 206 MALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALT---- 261
Query: 470 ECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIA- 528
G++ +WG G GQLG + VP + AL ++ I +A G S + A
Sbjct: 262 ---------EEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 312
Query: 529 ------LTTSGHVYTMGSTAYGQLGCP--PADGKVPTRV-----EDKIADSFIEDIACGS 575
LT G ++ G+ QLG P P P V ED+ + I+ G+
Sbjct: 313 TGWDWFLTDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGA 372
Query: 576 YHVAVLTSKA 585
H L S++
Sbjct: 373 SHALCLVSRS 382
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 158/340 (46%), Gaps = 35/340 (10%)
Query: 295 IGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHT 354
I CG H+ L T G+++ WG+ GGRLG G E VF P L +I +A G H+
Sbjct: 37 ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 95
Query: 355 CAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTS 414
A+T+ GD++TWG G G LGH +P+RV D ++S ++ HTA +T
Sbjct: 96 VALTHQGDVFTWGYGGF--GALGHKVYTRELVPRRVD-DSWDCKISAIATSGTHTAAITE 152
Query: 415 GGQLFTFG-------DGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGV 467
G+L+ +G G G + ++P +V+ L + VSCG + T A+
Sbjct: 153 SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALT-- 209
Query: 468 IDECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTI 527
G+L+ WG +LG D P V +L I ++ACG ++
Sbjct: 210 -----------KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSL 258
Query: 528 ALTTSGHVYTMGSTAYGQLGCPPA-DGKVPTRVEDKIADSFIEDIACGSYHVAV------ 580
ALT G V + G +GQLG + KVPT +E +AD I IA G A
Sbjct: 259 ALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIE-ALADKKIVFIASGGSSSAAITGWDW 317
Query: 581 -LTSKAEVYTWGKGLNGQLG-HGDNDHRNKPTLVEFLKDK 618
LT E++ WG + QLG G + + P V FL ++
Sbjct: 318 FLTDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEE 357
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 141/300 (47%), Gaps = 25/300 (8%)
Query: 347 VACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGP 406
++CG +H+ +T GDL+ WG G + G LG G E S ++P ++ E + ++ G
Sbjct: 37 ISCGLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVPN-LNPLFEEHSIRCIALGG 92
Query: 407 WHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVG 466
H+ +T G +FT+G G FGALGH ++ +PR V+ + + ++ HTAA+
Sbjct: 93 LHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAIT- 151
Query: 467 VIDECVEXXXXXXXGRLFTWG--DGDKGQLGHVDREPR-----LVPECVIALGNENIYRV 519
G L+ WG +GD R P VP V AL + V
Sbjct: 152 ------------ESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKAL-TVPVASV 198
Query: 520 ACGHSLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVA 579
+CG T+ALT G ++ G+ + +LG G + I IACG YH
Sbjct: 199 SCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSL 258
Query: 580 VLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHKWI 639
LT + +V +WG G +GQLG ++ PT +E L DK++ + G + +A + W
Sbjct: 259 ALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWF 318
>AT5G08710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:2834858-2837866 REVERSE
LENGTH=434
Length = 434
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 186/420 (44%), Gaps = 72/420 (17%)
Query: 250 IWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVLVTKQG 309
+WG YG LG G++ S+ + AL + ++ CG H + +T+
Sbjct: 53 MWGSG-DYGRLGLGNLD-------SQWTPAVCSALSDH---SITAVACGGAHTLFLTETR 101
Query: 310 EIFSWGEESGGRLGHGIEVDVFHPKLIDTL--SGMNIEL--VACGEYHTCAVTYSGDLYT 365
+F+ G G+LG V +D L SG++ ++ ++ G YH+ A+T G+LY
Sbjct: 102 RVFATGLNDCGQLG----VSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYM 157
Query: 366 WGDGTHNSGLLGHGNEVSHWI--PKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFG- 422
WG ++SG LG G + + + P +V + G+ + V+ G H+ VT GG++ ++G
Sbjct: 158 WGK--NSSGQLGLGKKAARVVRVPTKVEA-LHGITIQSVALGSEHSVAVTDGGEVLSWGG 214
Query: 423 -----------DGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDEC 471
FG L +S PR ++ L+G++ T V+ G+ H+A DE
Sbjct: 215 GGSGRLGHGHQSSLFGIL---RSNSEFTPRLIKELEGIKVTNVAAGLLHSACT----DE- 266
Query: 472 VEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIY--RVACGHSLTIAL 529
G F +G+ ++G P + +E Y VACG T +
Sbjct: 267 --------NGSAFMFGEKSINKMGFGGVRNATTPSII----SEVPYAEEVACGGYHTCVV 314
Query: 530 TTSGHVYTMGSTAYGQLGCPPA-DGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVY 588
T G +YT GS G LG P RVE +S + ++CG H A + S V+
Sbjct: 315 TRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAI-SDNNVF 373
Query: 589 TWGKG------------LNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLH 636
TWG G GQLGHG + +P +V+ K+ + + CG N TA V H
Sbjct: 374 TWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 465 VGVIDECVEXXXXXXXGRLFT--WGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACG 522
+G I C G+ F WG GD G+LG + + + P AL + +I VACG
Sbjct: 31 LGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACG 90
Query: 523 HSLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLT 582
+ T+ LT + V+ G GQLG +E D I I+ G YH A +T
Sbjct: 91 GAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAIT 150
Query: 583 SKAEVYTWGKGLNGQLGHGDNDHR--NKPTLVEFLKDKQVKSVVCGSNFTAVV 633
E+Y WGK +GQLG G R PT VE L ++SV GS + V
Sbjct: 151 VDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAV 203
>AT3G02300.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:461551-463929 FORWARD
LENGTH=471
Length = 471
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 154/363 (42%), Gaps = 42/363 (11%)
Query: 295 IGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHT 354
I CG +H V G +F+WG G+LG G EV HPK + L ++ V+CG + T
Sbjct: 66 ISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCT 125
Query: 355 CAVTYSGDLYTWGDGT-HNSGLLGHGNEVSHWIPKRVSGDIEGVR-VSYVSCGPWHTAIV 412
A+ + DGT S L G +P+ SG + VSCG H +
Sbjct: 126 AAIAEPRE----NDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVAL 181
Query: 413 TSGGQLFTFGDGTFGALGHG-DHSSTNIPREV--------ETLKGLRTTRVSCGVWHTAA 463
+ G L +G G LG G PR + E + ++ ++SCG +HTAA
Sbjct: 182 SEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAA 241
Query: 464 VVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDREP---RLVPECVIALGNENIYRVA 520
+ G ++TWG G GQLGHV + L+P V+ L ++ VA
Sbjct: 242 L-------------SDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVA 288
Query: 521 CGHSLTIALTTSGHVYTMGSTAYGQLGCPPADG----------KVPTRVEDKIADSFIED 570
CG T AL+ G +Y G GQLG P G + V + + +
Sbjct: 289 CGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRL 348
Query: 571 IACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFT 630
+ACG H V + + WG GQ + + + P+ V++ QV+ + G +
Sbjct: 349 VACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVG-QVRKLAAGGGHS 407
Query: 631 AVV 633
AV+
Sbjct: 408 AVL 410
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 17/176 (9%)
Query: 258 GILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEE 317
G L + + G S + + A + + + CG H V ++++G + +WG
Sbjct: 136 GTLSTSRLWVWGQNQGSNLPRLFSGAFPATTA--IRQVSCGTAHVVALSEEGLLQAWGYN 193
Query: 318 SGGRLGHGIEVDVFH-PKLIDTLSG--------MNIELVACGEYHTCAVTYSGDLYTWGD 368
G+LG G+ + P++I+ + + I ++CGEYHT A++ +G++YTWG
Sbjct: 194 EQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGL 253
Query: 369 GTHNSGLLGHGNEVS---HWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTF 421
G+ G LGH + S IP+RV G ++GV + V+CG HT ++ G L+ +
Sbjct: 254 GSM--GQLGHVSLQSGDKELIPRRVVG-LDGVSMKEVACGGVHTCALSLEGALYAW 306
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 13/191 (6%)
Query: 285 ESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDV----FHPKLIDTLS 340
E+ ++ + + CG H ++ GE+++WG S G+LGH + + P+ + L
Sbjct: 222 EAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGH-VSLQSGDKELIPRRVVGLD 280
Query: 341 GMNIELVACGEYHTCAVTYSGDLYTWGDGTH-------NSGLLGHGNEVSHWIPKRVSGD 393
G++++ VACG HTCA++ G LY WG G SG + S + + V
Sbjct: 281 GVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVL 340
Query: 394 IEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTR 453
+ V V+CG HT + G++ +G ++G + S P V+ G + +
Sbjct: 341 VIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVG-QVRK 399
Query: 454 VSCGVWHTAAV 464
++ G H+A +
Sbjct: 400 LAAGGGHSAVL 410
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 526 TIALTTSGHVYTMGSTAYGQLGCPPADG--KVPTRVEDKI------ADSFIEDIACGSYH 577
++++ T +Y G GQ G + ++P ++ ++ A+S DI+CG H
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72
Query: 578 VAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVV 633
A + S ++ WG GQLG G R P V+ L+ + VK V CG+ TA +
Sbjct: 73 TAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAI 128
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 29/180 (16%)
Query: 467 VIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDRE-----PRLVPECVI---ALGNENIYR 518
+I E ++ WG GQ G ++E P+ +P + A N
Sbjct: 6 IIGEVAPSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLD 65
Query: 519 VACGHSLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHV 578
++CG T A+ + G ++ G+ YGQLG G+ + ++ F++ ++CG++
Sbjct: 66 ISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCT 125
Query: 579 AVLT---------SKAEVYTWGKGLNGQLGHGDNDHRNKPTLVE--FLKDKQVKSVVCGS 627
A + S + ++ WG+ N N P L F ++ V CG+
Sbjct: 126 AAIAEPRENDGTLSTSRLWVWGQ----------NQGSNLPRLFSGAFPATTAIRQVSCGT 175
>AT5G16040.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:5240860-5243308 REVERSE
LENGTH=396
Length = 396
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 165/360 (45%), Gaps = 36/360 (10%)
Query: 261 GSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESGG 320
GSG ++G + E + L +++ +V S+ G ++++ + G++F+WG G
Sbjct: 11 GSGEDGQLGLGTDEEKE--LASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRG 68
Query: 321 RLGHGIEVDVFH-PKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNS-GLLGH 378
LGH E P L+ +L+ + I A G +H AV G Y WG + G
Sbjct: 69 TLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPS 128
Query: 379 GNEVSH------WIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHG 432
+E IPKR + + + V V+ G H+ ++T G ++T+G G
Sbjct: 129 KDETGRPVRRDIVIPKRCA---QQLTVRQVAAGGTHSVVLTREGYVWTWGQ----PWPPG 181
Query: 433 DHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKG 492
D ++P V+ L+ +R ++ G +H A+ G L+ WG+ + G
Sbjct: 182 DIKQISVPVRVQGLENVRL--IAVGAFHNLAL-------------KEDGTLWAWGNNEYG 226
Query: 493 QLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPAD 552
QLG D +PR P V L + + +A G + ALT G VY G +G+LG D
Sbjct: 227 QLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286
Query: 553 GK---VPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKP 609
+P +V + +A I ++CG H LT ++++G+G +G+LG+G +P
Sbjct: 287 KSSKMLPQKV-NLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 153/365 (41%), Gaps = 48/365 (13%)
Query: 311 IFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGT 370
+ +WG G+LG G + + ++D L N+ V G ++ A+ G L+TWG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG--W 64
Query: 371 HNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALG 430
+ G LGH E + + V++ + G WH V G+ + +G +G G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 431 H---GDHSSTNIPREVETLK----GLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRL 483
D + + R++ K L +V+ G H+ + G +
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLT-------------REGYV 171
Query: 484 FTWGD----GDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMG 539
+TWG GD Q+ VP V L EN+ +A G +AL G ++ G
Sbjct: 172 WTWGQPWPPGDIKQIS--------VPVRVQGL--ENVRLIAVGAFHNLALKEDGTLWAWG 221
Query: 540 STAYGQLGC---PPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNG 596
+ YGQLG P +P + D D + DIA G +H LT++ EVY WG+G +G
Sbjct: 222 NNEYGQLGTGDTQPRSYPIPVQGLD---DLTLVDIAAGGWHSTALTNEGEVYGWGRGEHG 278
Query: 597 QLGHGDNDHRNK--PTLVEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNPF 654
+LG GDND +K P V L + + V CG + + I S G H
Sbjct: 279 RLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRI----FSFGRGDHGRL 334
Query: 655 NFRRK 659
+ RK
Sbjct: 335 GYGRK 339
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 291 DVHSIGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACG 350
+V I G H + + + G +++WG G+LG G +P + L + + +A G
Sbjct: 197 NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAG 256
Query: 351 EYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTA 410
+H+ A+T G++Y WG G H G ++ S +P++V+ + G + VSCG H+
Sbjct: 257 GWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVN-LLAGEDIIQVSCGGTHSV 315
Query: 411 IVTSGGQLFTFGDGTFGALGHGDHSSTNIPREV 443
+T G++F+FG G G LG+G +T P E+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLEL 348
>AT3G02510.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522086-524536 REVERSE
LENGTH=393
Length = 393
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 38/361 (10%)
Query: 261 GSGSMQRVGSRSSSEMD-AILPKALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESG 319
GSG ++G ++ E + A + +ALE V S+ G ++++ + G +F+WG
Sbjct: 11 GSGEDGQLGIGTNEEKEWACVVEALEP---YSVRSVVSGSRNSLAICDDGTMFTWGWNQR 67
Query: 320 GRLGHGIEVDVFH-PKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNS----- 373
G LGH E + P + L+ + I A G +H AV G Y WG +
Sbjct: 68 GTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 127
Query: 374 --GLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGH 431
+G IPKR + + V V+ G H+ ++T G ++T+G
Sbjct: 128 LKDEMGRPVRRDIVIPKRCAPKLT---VRQVAAGGTHSVVLTREGHVWTWGQ----PWPP 180
Query: 432 GDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDK 491
GD ++P V+ L+ +R ++ G +H A+ GRL WG+ +
Sbjct: 181 GDIKQISVPVRVQGLENVRL--IAVGAFHNLAL-------------EEDGRLLAWGNNEY 225
Query: 492 GQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPA 551
GQLG D +P P V L + + +A G + ALT G VY G +G+LG
Sbjct: 226 GQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDN 285
Query: 552 DGK---VPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNK 608
D VP +V + +A+ I ++CG H LT ++++G+G +G+LG+G +
Sbjct: 286 DKSSKMVPQKV-NLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQ 344
Query: 609 P 609
P
Sbjct: 345 P 345
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 155/366 (42%), Gaps = 50/366 (13%)
Query: 311 IFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGT 370
I +WG G+LG G + +++ L ++ V G ++ A+ G ++TWG
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG--W 64
Query: 371 HNSGLLGHGNEV-SHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGAL 429
+ G LGH E + IP RV + V+++ + G WH V G+ + +G +G
Sbjct: 65 NQRGTLGHQPETKTENIPSRVKA-LANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123
Query: 430 GH---GDHSSTNIPREVETLK----GLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGR 482
G D + R++ K L +V+ G H+ + G
Sbjct: 124 GEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT-------------REGH 170
Query: 483 LFTWGD----GDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTM 538
++TWG GD Q+ VP V G EN+ +A G +AL G +
Sbjct: 171 VWTWGQPWPPGDIKQIS--------VP--VRVQGLENVRLIAVGAFHNLALEEDGRLLAW 220
Query: 539 GSTAYGQLGC---PPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLN 595
G+ YGQLG P VP + D D + DIA G +H LT K EVY WG+G +
Sbjct: 221 GNNEYGQLGTGDTQPTSHPVPVQGLD---DLTLVDIAAGGWHSTALTDKGEVYGWGRGEH 277
Query: 596 GQLGHGDNDHRNK--PTLVEFLKDKQVKSVVCGSNFTAVVCLHKWIPSVDHSCCSGCHNP 653
G+LG GDND +K P V L ++ + V CG + + I S G H
Sbjct: 278 GRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRI----FSFGRGDHGR 333
Query: 654 FNFRRK 659
+ RK
Sbjct: 334 LGYGRK 339
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 152/335 (45%), Gaps = 52/335 (15%)
Query: 280 LPKALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESGGR---------LGHGIEVDV 330
+P +++ + + G H + V QG ++WG G+ +G + D+
Sbjct: 81 IPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI 140
Query: 331 FHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRV 390
PK + + VA G H+ +T G ++TWG G ++S +P RV
Sbjct: 141 VIPKRC--APKLTVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQIS--VPVRV 192
Query: 391 SGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLR 450
G +E VR+ ++ G +H + G+L +G+ +G LG GD T+ P V+ L L
Sbjct: 193 QG-LENVRL--IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLT 249
Query: 451 TTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLG--HVDREPRLVPECV 508
++ G WH+ A+ G ++ WG G+ G+LG D+ ++VP+ V
Sbjct: 250 LVDIAAGGWHSTALT-------------DKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKV 296
Query: 509 IALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLG----------------CPPAD 552
L E+I +V+CG + ++ALT G +++ G +G+LG PP +
Sbjct: 297 NLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPE 356
Query: 553 GKVPTRVEDKIADSFIEDIACGSYH-VAVLTSKAE 586
G E++ + IACG H +A++ K++
Sbjct: 357 GSFNHTDEEEEGKWSAKSIACGGRHTLAIVEWKSD 391
>AT3G26100.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538063-9540149 FORWARD
LENGTH=532
Length = 532
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 166/370 (44%), Gaps = 42/370 (11%)
Query: 252 GEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVLVTKQGEI 311
GE ++G SG + + + + + ++L+ ++ + G +L++ G++
Sbjct: 162 GEVYTFGYNNSGQLGHGHTEDEARIQPV--RSLQGVRIIQAAA---GAARTMLISDDGKV 216
Query: 312 FSWGEESGGRLGHGIE--VDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDG 369
++ G+ES G +G + V P+L+ +L + + A G Y T ++ G +YT+ G
Sbjct: 217 YACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWG 276
Query: 370 THNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHT---AIVTSGGQLFTFGDGTF 426
N G LGH E + P+ + G +E V V ++ G + A +G +++ G G
Sbjct: 277 --NDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLG 334
Query: 427 GALGHGDHSSTNIPREVETLK--GLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLF 484
G LGHG + PR +E + L+ V+ G WH AAVVG GR+
Sbjct: 335 GKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWH-AAVVG------------QDGRVC 381
Query: 485 TWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYG 544
TWG G G LGH + E VP+ V L + VA G T ++ G VY+ G
Sbjct: 382 TWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESA 441
Query: 545 QLGCPP---------ADGKVPT------RVEDKIADSFIEDIACGSYHVAVLTSKAEVYT 589
LG P A+ PT +V +++ + + + H LT +++
Sbjct: 442 SLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFA 501
Query: 590 WGKGLNGQLG 599
+G G GQLG
Sbjct: 502 FGAGDQGQLG 511
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 155/327 (47%), Gaps = 36/327 (11%)
Query: 350 GEYHTCAVTYSGDLYTWGDGTHNSGLLGHGN--EVSHWIPKRVSGDIEGVRVSYVSCGPW 407
G H+ AVT G++YT+G +NSG LGHG+ + + P R ++GVR+ + G
Sbjct: 151 GPGHSVAVTSKGEVYTFG--YNNSGQLGHGHTEDEARIQPVR---SLQGVRIIQAAAGAA 205
Query: 408 HTAIVTSGGQLFTFGDGTFGALGHGDHSSTNI--PREVETLKGLRTTRVSCGVWHTAAVV 465
T +++ G+++ G +FG +G + + P+ V +LK + + + G + TA +
Sbjct: 206 RTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVL- 264
Query: 466 GVIDECVEXXXXXXXGRLFTWGDGDKGQLGH----VDREPRLVPECVIALGNENIYRVAC 521
G+++T+ G+ G+LGH D EPR + + L N + ++A
Sbjct: 265 ------------SREGKVYTFSWGNDGRLGHQTEAADVEPRPL---LGPLENVPVVQIAA 309
Query: 522 GHSLTIALTTSGH---VYTMGSTAYGQLG-CPPADGKVPTRVED-KIADSFIEDIACGSY 576
G+ +AL + VY++G G+LG D K P +E +I + +A G++
Sbjct: 310 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAW 369
Query: 577 HVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLH 636
H AV+ V TWG G G LGHG+ + + P +VE L + V G T VV
Sbjct: 370 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDD 429
Query: 637 KWIPSV--DHSCCSGCHNPFNFRRKRH 661
+ S S G H F+ + RH
Sbjct: 430 GDVYSFGCGESASLGHHPSFDEQGNRH 456
>AT3G26100.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538458-9540149 FORWARD
LENGTH=432
Length = 432
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 166/370 (44%), Gaps = 42/370 (11%)
Query: 252 GEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVLVTKQGEI 311
GE ++G SG + + + + + ++L+ ++ + G +L++ G++
Sbjct: 62 GEVYTFGYNNSGQLGHGHTEDEARIQPV--RSLQGVRIIQAAA---GAARTMLISDDGKV 116
Query: 312 FSWGEESGGRLGHGIE--VDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDG 369
++ G+ES G +G + V P+L+ +L + + A G Y T ++ G +YT+ G
Sbjct: 117 YACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWG 176
Query: 370 THNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHT---AIVTSGGQLFTFGDGTF 426
N G LGH E + P+ + G +E V V ++ G + A +G +++ G G
Sbjct: 177 --NDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLG 234
Query: 427 GALGHGDHSSTNIPREVETLK--GLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLF 484
G LGHG + PR +E + L+ V+ G WH AAVVG GR+
Sbjct: 235 GKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWH-AAVVG------------QDGRVC 281
Query: 485 TWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYG 544
TWG G G LGH + E VP+ V L + VA G T ++ G VY+ G
Sbjct: 282 TWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESA 341
Query: 545 QLGCPP---------ADGKVPT------RVEDKIADSFIEDIACGSYHVAVLTSKAEVYT 589
LG P A+ PT +V +++ + + + H LT +++
Sbjct: 342 SLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFA 401
Query: 590 WGKGLNGQLG 599
+G G GQLG
Sbjct: 402 FGAGDQGQLG 411
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 153/324 (47%), Gaps = 30/324 (9%)
Query: 350 GEYHTCAVTYSGDLYTWGDGTHNSGLLGHGN--EVSHWIPKRVSGDIEGVRVSYVSCGPW 407
G H+ AVT G++YT+G +NSG LGHG+ + + P R ++GVR+ + G
Sbjct: 51 GPGHSVAVTSKGEVYTFG--YNNSGQLGHGHTEDEARIQPVR---SLQGVRIIQAAAGAA 105
Query: 408 HTAIVTSGGQLFTFGDGTFGALGHGDHSSTNI--PREVETLKGLRTTRVSCGVWHTAAVV 465
T +++ G+++ G +FG +G + + P+ V +LK + + + G + TA +
Sbjct: 106 RTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVL- 164
Query: 466 GVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIA-LGNENIYRVACGHS 524
G+++T+ G+ G+LGH + P ++ L N + ++A G+
Sbjct: 165 ------------SREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYC 212
Query: 525 LTIALTTSGH---VYTMGSTAYGQLG-CPPADGKVPTRVED-KIADSFIEDIACGSYHVA 579
+AL + VY++G G+LG D K P +E +I + +A G++H A
Sbjct: 213 YLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAA 272
Query: 580 VLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVCLHKWI 639
V+ V TWG G G LGHG+ + + P +VE L + V G T VV +
Sbjct: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDV 332
Query: 640 PSV--DHSCCSGCHNPFNFRRKRH 661
S S G H F+ + RH
Sbjct: 333 YSFGCGESASLGHHPSFDEQGNRH 356
>AT3G02510.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522524-524536 REVERSE
LENGTH=310
Length = 310
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 145/331 (43%), Gaps = 46/331 (13%)
Query: 311 IFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGT 370
I +WG G+LG G + +++ L ++ V G ++ A+ G ++TWG
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG--W 64
Query: 371 HNSGLLGHGNEV-SHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGAL 429
+ G LGH E + IP RV + V+++ + G WH V G+ + +G +G
Sbjct: 65 NQRGTLGHQPETKTENIPSRVKA-LANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123
Query: 430 GH---GDHSSTNIPREVETLK----GLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGR 482
G D + R++ K L +V+ G H+ + G
Sbjct: 124 GEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT-------------REGH 170
Query: 483 LFTWGD----GDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTM 538
++TWG GD Q+ VP V G EN+ +A G +AL G +
Sbjct: 171 VWTWGQPWPPGDIKQIS--------VP--VRVQGLENVRLIAVGAFHNLALEEDGRLLAW 220
Query: 539 GSTAYGQLGC---PPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLN 595
G+ YGQLG P VP + D D + DIA G +H LT K EVY WG+G +
Sbjct: 221 GNNEYGQLGTGDTQPTSHPVPVQGLD---DLTLVDIAAGGWHSTALTDKGEVYGWGRGEH 277
Query: 596 GQLGHGDNDHRNK--PTLVEFLKDKQVKSVV 624
G+LG GDND +K P V L ++ + V+
Sbjct: 278 GRLGLGDNDKSSKMVPQKVNLLAEEDIIQVL 308
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 138/320 (43%), Gaps = 35/320 (10%)
Query: 261 GSGSMQRVGSRSSSEMD-AILPKALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESG 319
GSG ++G ++ E + A + +ALE V S+ G ++++ + G +F+WG
Sbjct: 11 GSGEDGQLGIGTNEEKEWACVVEALEP---YSVRSVVSGSRNSLAICDDGTMFTWGWNQR 67
Query: 320 GRLGHGIEVDVFH-PKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNS----- 373
G LGH E + P + L+ + I A G +H AV G Y WG +
Sbjct: 68 GTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 127
Query: 374 --GLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGH 431
+G IPKR + + V V+ G H+ ++T G ++T+G
Sbjct: 128 LKDEMGRPVRRDIVIPKRCAPKLT---VRQVAAGGTHSVVLTREGHVWTWGQ----PWPP 180
Query: 432 GDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDK 491
GD ++P V+ L+ +R ++ G +H A+ GRL WG+ +
Sbjct: 181 GDIKQISVPVRVQGLENVRL--IAVGAFHNLAL-------------EEDGRLLAWGNNEY 225
Query: 492 GQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPA 551
GQLG D +P P V L + + +A G + ALT G VY G +G+LG
Sbjct: 226 GQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDN 285
Query: 552 DGKVPTRVEDKIADSFIEDI 571
D K V K+ EDI
Sbjct: 286 D-KSSKMVPQKVNLLAEEDI 304
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 114/279 (40%), Gaps = 44/279 (15%)
Query: 363 LYTWGDGTHNSGLLGHG-NEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTF 421
+ WG G G LG G NE W V +E V V G ++ + G +FT+
Sbjct: 7 IIAWGSG--EDGQLGIGTNEEKEW--ACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTW 62
Query: 422 GDGTFGALGHGDHSST-NIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXX 480
G G LGH + T NIP V+ L ++ T+ + G WH AV
Sbjct: 63 GWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAV-------------DDQ 109
Query: 481 GRLFTWGDGDKGQLGH----------VDREPRLVPECVIALGNENIYRVACGHSLTIALT 530
GR + WG + GQ G V R+ + C L + +VA G + ++ LT
Sbjct: 110 GRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL---TVRQVAAGGTHSVVLT 166
Query: 531 TSGHVYTMGSTAYGQLGCPPADGK---VPTRVEDKIADSFIEDIACGSYHVAVLTSKAEV 587
GHV+T G PP D K VP RV+ + IA G++H L +
Sbjct: 167 REGHVWTWGQP------WPPGDIKQISVPVRVQ---GLENVRLIAVGAFHNLALEEDGRL 217
Query: 588 YTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCG 626
WG GQLG GD + P V+ L D + + G
Sbjct: 218 LAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAG 256
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 242 FDALGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKH 301
D G + WG + YG G ++ R D ++PK K L V + G H
Sbjct: 106 VDDQGRAYAWGGN-EYGQCGEEPLKDEMGRPVRR-DIVIPKRCAPK--LTVRQVAAGGTH 161
Query: 302 AVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSG 361
+V++T++G +++WG+ G + P + L N+ L+A G +H A+ G
Sbjct: 162 SVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQGLE--NVRLIAVGAFHNLALEEDG 215
Query: 362 DLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTF 421
L WG+ + G SH +P V G ++ + + ++ G WH+ +T G+++ +
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVP--VQG-LDDLTLVDIAAGGWHSTALTDKGEVYGW 272
Query: 422 GDGTFGALGHGDH--SSTNIPREVETL 446
G G G LG GD+ SS +P++V L
Sbjct: 273 GRGEHGRLGLGDNDKSSKMVPQKVNLL 299
>AT3G03790.1 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1078
Length = 1078
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 24/241 (9%)
Query: 307 KQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTW 366
+ E+FSWG + +LG G + P +D+L G I+LV+ ++H+ A++ G++YTW
Sbjct: 148 QSSEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTW 207
Query: 367 GDGTHNSGLLG------HGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFT 420
G G G LG H + + P++V + RV V+ HT I T GG ++T
Sbjct: 208 GFG--RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYT 265
Query: 421 FGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXX 480
+G G LG+ + PR+V +LK + VS HTA V+ +C
Sbjct: 266 WGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAANKHTA----VVSDC--------- 311
Query: 481 GRLFTWGDGDKGQLGH--VDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTM 538
G +FTWG +GQLG+ + P V L + +A T+ L G VYT
Sbjct: 312 GEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW 371
Query: 539 G 539
G
Sbjct: 372 G 372
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 170/410 (41%), Gaps = 80/410 (19%)
Query: 247 DVFIWGEDISYGILGSGS--MQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVL 304
+VF WG +Y LG+G+ +Q+V R S + + H+V
Sbjct: 151 EVFSWGNGANYQ-LGTGNQHVQKVPGRVDSLHGCF------------IKLVSAAKFHSVA 197
Query: 305 VTKQGEIFSWGEESGGRLG------HGIEVDVFHPK-LIDTLSGMNIELVACGEYHTCAV 357
++ GE+++WG GGRLG H + V P+ +I L ++ VA ++HT
Sbjct: 198 ISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIA 257
Query: 358 TYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQ 417
T GD+YTW G++ G LG+ + + P++V+ ++ VS HTA+V+ G+
Sbjct: 258 TEGGDVYTW--GSNREGQLGYTSVDTQATPRKVTS--LKAKIVAVSAANKHTAVVSDCGE 313
Query: 418 LFTFGDGTFGALGHG--DHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXX 475
+FT+G G LG+G + +S PR V+ LKG T ++ +HT +
Sbjct: 314 VFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL----------- 362
Query: 476 XXXXXGRLFTWGDGDKGQLGHVDREPR--LVPECVIALGNE--NIYR--------VACGH 523
G ++TW GH PR ++ + GN N +R +A G
Sbjct: 363 --RNDGEVYTW--------GHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGM 412
Query: 524 SLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTS 583
++AL G + S+ D + + + + I+ G Y + +TS
Sbjct: 413 VHSLALAEDGAFFYWVSS----------DSNLRCQQLHSLHGKTVVSISAGKYWASAVTS 462
Query: 584 KAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVV 633
EVY W G N P+L K+ +V G VV
Sbjct: 463 TGEVYMW---------DGKNGKDIAPSLSRLHNLKRATTVAVGETHLLVV 503
>AT3G03790.2 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1081
Length = 1081
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 24/238 (10%)
Query: 310 EIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDG 369
E+FSWG + +LG G + P +D+L G I+LV+ ++H+ A++ G++YTWG G
Sbjct: 154 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG 213
Query: 370 THNSGLLG------HGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGD 423
G LG H + + P++V + RV V+ HT I T GG ++T+G
Sbjct: 214 --RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGS 271
Query: 424 GTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRL 483
G LG+ + PR+V +LK + VS HTA V+ +C G +
Sbjct: 272 NREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAANKHTA----VVSDC---------GEV 317
Query: 484 FTWGDGDKGQLGH--VDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMG 539
FTWG +GQLG+ + P V L + +A T+ L G VYT G
Sbjct: 318 FTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 170/410 (41%), Gaps = 80/410 (19%)
Query: 247 DVFIWGEDISYGILGSGS--MQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVL 304
+VF WG +Y LG+G+ +Q+V R S + + H+V
Sbjct: 154 EVFSWGNGANYQ-LGTGNQHVQKVPGRVDSLHGCF------------IKLVSAAKFHSVA 200
Query: 305 VTKQGEIFSWGEESGGRLG------HGIEVDVFHPK-LIDTLSGMNIELVACGEYHTCAV 357
++ GE+++WG GGRLG H + V P+ +I L ++ VA ++HT
Sbjct: 201 ISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIA 260
Query: 358 TYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQ 417
T GD+YTW G++ G LG+ + + P++V+ ++ VS HTA+V+ G+
Sbjct: 261 TEGGDVYTW--GSNREGQLGYTSVDTQATPRKVTS--LKAKIVAVSAANKHTAVVSDCGE 316
Query: 418 LFTFGDGTFGALGHG--DHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXX 475
+FT+G G LG+G + +S PR V+ LKG T ++ +HT +
Sbjct: 317 VFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL----------- 365
Query: 476 XXXXXGRLFTWGDGDKGQLGHVDREPR--LVPECVIALGNE--NIYR--------VACGH 523
G ++TW GH PR ++ + GN N +R +A G
Sbjct: 366 --RNDGEVYTW--------GHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGM 415
Query: 524 SLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTS 583
++AL G + S+ D + + + + I+ G Y + +TS
Sbjct: 416 VHSLALAEDGAFFYWVSS----------DSNLRCQQLHSLHGKTVVSISAGKYWASAVTS 465
Query: 584 KAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVV 633
EVY W G N P+L K+ +V G VV
Sbjct: 466 TGEVYMW---------DGKNGKDIAPSLSRLHNLKRATTVAVGETHLLVV 506
>AT3G03790.3 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-968011 FORWARD LENGTH=1099
Length = 1099
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 24/238 (10%)
Query: 310 EIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDG 369
E+FSWG + +LG G + P +D+L G I+LV+ ++H+ A++ G++YTWG G
Sbjct: 154 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG 213
Query: 370 THNSGLLG------HGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGD 423
G LG H + + P++V + RV V+ HT I T GG ++T+G
Sbjct: 214 --RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGS 271
Query: 424 GTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRL 483
G LG+ + PR+V +LK + VS HTA V+ +C G +
Sbjct: 272 NREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAANKHTA----VVSDC---------GEV 317
Query: 484 FTWGDGDKGQLGH--VDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMG 539
FTWG +GQLG+ + P V L + +A T+ L G VYT G
Sbjct: 318 FTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 170/410 (41%), Gaps = 80/410 (19%)
Query: 247 DVFIWGEDISYGILGSGS--MQRVGSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVL 304
+VF WG +Y LG+G+ +Q+V R S + + H+V
Sbjct: 154 EVFSWGNGANYQ-LGTGNQHVQKVPGRVDSLHGCF------------IKLVSAAKFHSVA 200
Query: 305 VTKQGEIFSWGEESGGRLG------HGIEVDVFHPK-LIDTLSGMNIELVACGEYHTCAV 357
++ GE+++WG GGRLG H + V P+ +I L ++ VA ++HT
Sbjct: 201 ISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIA 260
Query: 358 TYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQ 417
T GD+YTW G++ G LG+ + + P++V+ ++ VS HTA+V+ G+
Sbjct: 261 TEGGDVYTW--GSNREGQLGYTSVDTQATPRKVTS--LKAKIVAVSAANKHTAVVSDCGE 316
Query: 418 LFTFGDGTFGALGHG--DHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXX 475
+FT+G G LG+G + +S PR V+ LKG T ++ +HT +
Sbjct: 317 VFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL----------- 365
Query: 476 XXXXXGRLFTWGDGDKGQLGHVDREPR--LVPECVIALGNE--NIYR--------VACGH 523
G ++TW GH PR ++ + GN N +R +A G
Sbjct: 366 --RNDGEVYTW--------GHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGM 415
Query: 524 SLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTS 583
++AL G + S+ D + + + + I+ G Y + +TS
Sbjct: 416 VHSLALAEDGAFFYWVSS----------DSNLRCQQLHSLHGKTVVSISAGKYWASAVTS 465
Query: 584 KAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVV 633
EVY W G N P+L K+ +V G VV
Sbjct: 466 TGEVYMW---------DGKNGKDIAPSLSRLHNLKRATTVAVGETHLLVV 506
>AT5G60870.3 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487257 REVERSE
LENGTH=276
Length = 276
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 128/278 (46%), Gaps = 27/278 (9%)
Query: 320 GRLGHGIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWG----DGTHNSGL 375
G LGH + P+ +D I +A HT A+T SG+LY WG DG G
Sbjct: 13 GALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 72
Query: 376 LGHGNEVSHW-IPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDH 434
NE +P +V V V+ VSCG + T +T GQL+ +G + LG GD+
Sbjct: 73 GRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDN 130
Query: 435 SSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQL 494
P V +L+G+R T+++CG +H+ A+ G++ +WG G GQL
Sbjct: 131 LGGWEPMPVPSLEGVRITQIACGGYHSLALT-------------EEGKVLSWGHGGHGQL 177
Query: 495 GHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGCP--PAD 552
G + VP + AL ++ I +A G S + A+T G ++ G+ QLG P P
Sbjct: 178 GSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEI 237
Query: 553 GKVPTRV-----EDKIADSFIEDIACGSYHVAVLTSKA 585
P V ED+ + I+ G+ H L S++
Sbjct: 238 QTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSRS 275
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 32/228 (14%)
Query: 279 ILPKALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESGGRL-----------GHGIE 327
++P+ ++ + +I H +T+ GE++ WG E G G G+
Sbjct: 24 LVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLS 83
Query: 328 VDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIP 387
V P + L+ + + V+CG + T A+T G L+ WG ++ LG G+ + W P
Sbjct: 84 V----PSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYE--LGRGDNLGGWEP 136
Query: 388 KRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLK 447
V +EGVR++ ++CG +H+ +T G++ ++G G G LG + +P E+E L
Sbjct: 137 MPVP-SLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALA 195
Query: 448 GLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLG 495
+ ++ G +AA+ G L+ WG+ QLG
Sbjct: 196 DKKIVFIASGGSSSAAIT-------------DGGELWMWGNAKDFQLG 230
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 25/254 (9%)
Query: 374 GLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFG-------DGTF 426
G LGH +P+RV D ++S ++ HTA +T G+L+ +G G
Sbjct: 13 GALGHKVYTRELVPRRVD-DSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLG 71
Query: 427 GALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTW 486
G + ++P +V+ L + VSCG + T A+ G+L+ W
Sbjct: 72 PGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALT-------------KEGQLWNW 117
Query: 487 GDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQL 546
G +LG D P V +L I ++ACG ++ALT G V + G +GQL
Sbjct: 118 GANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQL 177
Query: 547 GCPPA-DGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLG-HGDND 604
G + KVPT +E +AD I IA G A +T E++ WG + QLG G +
Sbjct: 178 GSSSLRNQKVPTEIE-ALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPE 236
Query: 605 HRNKPTLVEFLKDK 618
+ P V FL ++
Sbjct: 237 IQTTPVEVNFLTEE 250
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 418 LFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXX 477
L G G FGALGH ++ +PR V+ + + ++ HTAA+
Sbjct: 4 LVVRGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAIT------------ 51
Query: 478 XXXGRLFTWG--DGDKGQLGHVDREPR-----LVPECVIALGNENIYRVACGHSLTIALT 530
G L+ WG +GD R P VP V AL + V+CG T+ALT
Sbjct: 52 -ESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKAL-TVPVASVSCGGFFTMALT 109
Query: 531 TSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTW 590
G ++ G+ + +LG G + I IACG YH LT + +V +W
Sbjct: 110 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 169
Query: 591 GKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVV 633
G G +GQLG ++ PT +E L DK++ + G + +A +
Sbjct: 170 GHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 212
>AT3G55580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:20612766-20615730 FORWARD
LENGTH=488
Length = 488
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 121/276 (43%), Gaps = 44/276 (15%)
Query: 333 PKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEV-----SHWIP 387
P L+ G+ I VA G HT A++ G ++ WG G G LG G+ V H IP
Sbjct: 225 PCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRVRLVSSPHPIP 282
Query: 388 --------KRVS-----------GDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGA 428
K S G + G V ++CG H+A++T G L TFG G +G
Sbjct: 283 CIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQ 342
Query: 429 LGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGD 488
G G P V +L G+R V+ G+WHT G ++ +G
Sbjct: 343 CGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCA-------------SSDGDVYAFGG 389
Query: 489 GDKGQLGHVDREPRLVPECVIA--LGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQL 546
GQLG + +P+ + A L N N+ ++CG T +T G V+ G YGQL
Sbjct: 390 NQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQL 449
Query: 547 GCPPA-DGKVPTRVEDKIADSFIEDIACGSYHVAVL 581
G D P V +I D F ++IACG +H +L
Sbjct: 450 GIGDVIDRNAPAEV--RIKDCFPKNIACGWWHTLLL 483
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 115/234 (49%), Gaps = 22/234 (9%)
Query: 245 LGDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAILP----KALESKVVLD--------- 291
+G V+ WG G LG GS R+ S S + I P KA S V +
Sbjct: 252 IGQVWGWGYG-GEGQLGLGSRVRLVS-SPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVL 309
Query: 292 ---VHSIGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTLSGMNIELVA 348
V I CG +H+ ++T G + ++G G+ G G D P + +L G+ IE VA
Sbjct: 310 GSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVA 369
Query: 349 CGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSG-DIEGVRVSYVSCGPW 407
G +HT + GD+Y +G + G LG G + + +PK + ++E V V +SCG
Sbjct: 370 AGLWHTTCASSDGDVYAFGG--NQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGAR 427
Query: 408 HTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHT 461
HTA++T G++F +G +G LG GD N P EV +K ++CG WHT
Sbjct: 428 HTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHT 480
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 135/301 (44%), Gaps = 50/301 (16%)
Query: 264 SMQRVGSRSSSEMDAILPKALESKVVLD----VHSIGCGYKHAVLVTKQGEIFSWGEESG 319
S + + +SS+ D I AL V L + S+ G +H + ++ G+++ WG
Sbjct: 204 SPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGE 263
Query: 320 GRLGHGIEVDVF---HP-KLID-------TLSGMN--------------IELVACGEYHT 354
G+LG G V + HP I+ T SG+N ++ +ACG H+
Sbjct: 264 GQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHS 323
Query: 355 CAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTS 414
+T +G L T+G G + G G G+ P VS + G+R+ V+ G WHT +S
Sbjct: 324 AVITDTGALLTFGWGLY--GQCGQGSTDDELSPTCVS-SLLGIRIEEVAAGLWHTTCASS 380
Query: 415 GGQLFTFGDGTFGALGHGDHSSTNIPR--EVETLKGLRTTRVSCGVWHTAAVVGVIDECV 472
G ++ FG FG LG G + +P+ E L+ + +SCG HTA + DE
Sbjct: 381 DGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVIT---DE-- 435
Query: 473 EXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACG--HSLTIALT 530
GR+F WG GQLG D R P + + + +ACG H+L +
Sbjct: 436 --------GRVFCWGWNKYGQLGIGDVIDRNAP-AEVRIKDCFPKNIACGWWHTLLLGQP 486
Query: 531 T 531
T
Sbjct: 487 T 487
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 114/259 (44%), Gaps = 43/259 (16%)
Query: 396 GVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDH--------------------- 434
GVR+ V+ G HT ++ GQ++ +G G G LG G
Sbjct: 233 GVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKA 292
Query: 435 --SSTNIPREVET--LKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGD 490
S N+ V+ + G +++CG H+A + G L T+G G
Sbjct: 293 TSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVIT-------------DTGALLTFGWGL 339
Query: 491 KGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLG--C 548
GQ G + L P CV +L I VA G T ++ G VY G +GQLG C
Sbjct: 340 YGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGC 399
Query: 549 PPADGKVPTRVE-DKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRN 607
A+ +P +E + + ++ I+CG+ H AV+T + V+ WG GQLG GD RN
Sbjct: 400 DQAE-TLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRN 458
Query: 608 KPTLVEFLKDKQVKSVVCG 626
P V +KD K++ CG
Sbjct: 459 APAEVR-IKDCFPKNIACG 476
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 42/223 (18%)
Query: 439 IPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVD 498
+P V G+R V+ G HT A+ + G+++ WG G +GQLG
Sbjct: 224 LPCLVSLAPGVRIVSVAAGGRHTLALSDI-------------GQVWGWGYGGEGQLGLGS 270
Query: 499 R-----EPRLVP---------------------ECVIALGNENIYRVACGHSLTIALTTS 532
R P +P +C LG+ + ++ACG + +T +
Sbjct: 271 RVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGS-YVKKIACGGRHSAVITDT 329
Query: 533 GHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGK 592
G + T G YGQ G D ++ + IE++A G +H +S +VY +G
Sbjct: 330 GALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGG 389
Query: 593 GLNGQLGHGDNDHRNKPTLVEF--LKDKQVKSVVCGSNFTAVV 633
GQLG G + P L+E L++ VK++ CG+ TAV+
Sbjct: 390 NQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVI 432
>AT1G19880.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:6900648-6903818 REVERSE
LENGTH=538
Length = 538
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 166/395 (42%), Gaps = 51/395 (12%)
Query: 268 VGSRSSS-EMDAILPKALESKVVLDVH--SIGCGYKHAVLVTKQGEIFSWGEESGGRLGH 324
+G R + E + + P L V +++ + GC H V + +G ++WG G+LGH
Sbjct: 33 IGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGH 92
Query: 325 GIEVDVFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSH 384
G + P ++ LS I A G HT V S D + G G + G LG G+ +
Sbjct: 93 GDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVV--SDDGQSLGFGWNKYGQLGLGSAKNG 150
Query: 385 WIPKRVSGD----IEGVRVSYVSCGPWHTAIVTS--GGQLFTFGDGTFGALGHGDHSSTN 438
++ V + V+ V+CG T ++S G + T G +G LGHG + N
Sbjct: 151 FVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFN 210
Query: 439 I--------------PREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLF 484
+ P+ + +L G +V+CG HT AV G ++
Sbjct: 211 MKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAV-------------DKNGYVY 257
Query: 485 TWGDGDKGQLGHVDREPRLVPECVIALGNENIYR----VACGHSLTIALTTSGHVYTMGS 540
TWG G G+LGH +++ P + N+ ++ G + + G +Y
Sbjct: 258 TWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYM--- 314
Query: 541 TAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGH 600
+G++ D P + D ++ + + GS H + + + +WG G+LG+
Sbjct: 315 --WGKIKNNGDDWMYPKPMMD-LSGWNLRWMDSGSMH-HFVGADSSCISWGHAQYGELGY 370
Query: 601 GDNDHRNK--PTLVEFLKDKQVKSVVCGSNFTAVV 633
G N ++ P V+ L+ V V CG + V+
Sbjct: 371 GPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVI 405
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 20/223 (8%)
Query: 257 YGILGSGSMQRVGSRSSSEMDAI----LPKALESKVVLDVHSIGCGYKHAVLVTKQGEIF 312
YG LG G+ + SS A PKA+ S + + CG H V V K G ++
Sbjct: 198 YGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVY 257
Query: 313 SWGEESGGRLGHGIEVDVFHPKLIDTLSGMNI----ELVACGEYHTCAVTYSGDLYTWGD 368
+WG GRLGH + D + P+ ID N+ +++ G ++ G LY WG
Sbjct: 258 TWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGK 317
Query: 369 GTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGA 428
+N W+ + D+ G + ++ G H V + ++G +G
Sbjct: 318 IKNNG---------DDWMYPKPMMDLSGWNLRWMDSGSMHH-FVGADSSCISWGHAQYGE 367
Query: 429 LGHG--DHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVID 469
LG+G S+ P++V+ L+G+ V+CG H+ +V D
Sbjct: 368 LGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTD 410
>AT5G11580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:3718913-3721125 FORWARD
LENGTH=553
Length = 553
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 147/346 (42%), Gaps = 39/346 (11%)
Query: 279 ILPKALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLID- 337
++ + L K++ S+ G H + +T G ++SWG GRLG G E D P L++
Sbjct: 9 LISEDLSRKII----SLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEF 64
Query: 338 --TLSGMNIEL--VACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRV--- 390
G I + VA G YH+ AV+ G ++ WG + N ++ + K +
Sbjct: 65 PNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFER 124
Query: 391 ---------SGDIEG--VRVSYVSCGPWHTAIVTSGGQLFTFGD---GTFGALGHGDHSS 436
SG G ++V V G + + + G L+ +G+ +S
Sbjct: 125 ETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTS 184
Query: 437 TNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGH 496
IP + G +V+CG H A+VG D + L++WG+ GQLG
Sbjct: 185 IPIPFPILDFHGRTVLKVACGDEHVVALVGPGD--IHKDNSYDVSVLYSWGNNHHGQLGL 242
Query: 497 VDREPRLVPECVIALGNEN---IYRVACGHSLTIALTTSGHV-------YTMGSTAYGQL 546
D E R P+ V ++ +Y +ACG T LT +T G GQL
Sbjct: 243 GDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQL 302
Query: 547 GC-PPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWG 591
G +P V D +++ + CG +H +V++S+ V++WG
Sbjct: 303 GHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 147/334 (44%), Gaps = 51/334 (15%)
Query: 347 VACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIPKRVS--GDIEG--VRVSYV 402
+A GE HT A+T G +Y+WG G G LG G E +P V EG +R+ V
Sbjct: 21 LAAGEAHTIALTGDGCVYSWGRGMF--GRLGTGKESDELVPVLVEFPNQAEGDRIRIVGV 78
Query: 403 SCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCG----- 457
+ G +H+ V+ G ++ +G +G LG D ++ P ++ L T+ S
Sbjct: 79 AAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFERETSSSSLNDSGRE 137
Query: 458 VWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRL------VPECVIAL 511
V V V + G L+ WG+ + +PRL +P ++
Sbjct: 138 VGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQD---SEPDPRLSFTSIPIPFPILDF 194
Query: 512 GNENIYRVACGHSLTIALTTSGHV-----------YTMGSTAYGQLGCPPADGKVPTRVE 560
+ +VACG +AL G + Y+ G+ +GQLG DG+ +R
Sbjct: 195 HGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGL--GDGE--SRAR 250
Query: 561 DKIADSF-------IEDIACGSYHVAVLTSKAEV-------YTWGKGLNGQLGHGDNDHR 606
+ ++F + DIACG++H A+LT + E +T+G G NGQLGH N
Sbjct: 251 PQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSS 310
Query: 607 NKPTLVEFLKDKQ-VKSVVCGSNFTAVVCLHKWI 639
+ P V L + + SV CG T+VV ++
Sbjct: 311 SLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYV 344
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 173/417 (41%), Gaps = 71/417 (17%)
Query: 246 GDVFIWGEDISYGILGSGSMQRVGSRSSSEMDAIL---PKALESKVVLDVHSIGCGYKHA 302
G V+ WG + +G LG+G + S E+ +L P E + V + G H+
Sbjct: 35 GCVYSWGRGM-FGRLGTG-------KESDELVPVLVEFPNQAEGDRIRIV-GVAAGAYHS 85
Query: 303 VLVTKQGEIFSWGEESGGRLGHGIEVDVFHPKLIDTL------------------SGMNI 344
+ V+ G ++ WG G+LG E + P LI L S + +
Sbjct: 86 LAVSDDGSVWCWGYNIYGQLGFDGE-NSLAPCLIKNLFERETSSSSLNDSGREVGSDLKV 144
Query: 345 ELVACGEYHTCAVTYSGDLYTWGD-GTHNSGLLGHGNEVSHWIPKRVSGDIEGVRVSYVS 403
V G + A+ G L+ WG+ +S + S IP + D G V V+
Sbjct: 145 CTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPIL-DFHGRTVLKVA 203
Query: 404 CGPWHTAIVTSGGQ-----------LFTFGDGTFGALGHGDHSSTNIPREVETLK---GL 449
CG H + G L+++G+ G LG GD S P+ VET GL
Sbjct: 204 CGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGL 263
Query: 450 RTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVI 509
++CG HTA + +T+G G+ GQLGH + +PE V
Sbjct: 264 TVYDIACGAHHTALLT------YRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVS 317
Query: 510 ALGNENIYRVA--CGHSLTIALTTSGHVYTMGSTAYGQLGCP--------PADGKVPTRV 559
L E+ Y V+ CG T +++ G+V++ G G CP D VP ++
Sbjct: 318 DL-PEHAYLVSVDCGLFHTSVVSSEGYVWSWG-MERGLGLCPDVNFTEVEAGDDSVPRKI 375
Query: 560 EDKIADSFIED---IACGSYH-VAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLV 612
S D ++CG+ H V V+ ++++WG+G NG LG G+ PTLV
Sbjct: 376 SG--GSSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 289 VLDVH-----SIGCGYKHAVLVTKQGEI-----------FSWGEESGGRLGHGIEVDVFH 332
+LD H + CG +H V + G+I +SWG G+LG G
Sbjct: 191 ILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRAR 250
Query: 333 PKLIDTL---SGMNIELVACGEYHTCAVTY-----SGDLYTWGDGTHNSGLLGHGNEVSH 384
P+ ++T SG+ + +ACG +HT +TY G W G +G LGH + S
Sbjct: 251 PQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSS 310
Query: 385 WIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFG---------DGTFGALGHGDHS 435
+P+ VS E + V CG +HT++V+S G ++++G D F + GD S
Sbjct: 311 SLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDS 370
Query: 436 STNIPREVE--TLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQ 493
+PR++ + + +VSCG HT VV +L++WG G G
Sbjct: 371 ---VPRKISGGSSRFRDPVQVSCGAAHTVLVV------------DGGYKLWSWGRGRNGV 415
Query: 494 LGHVDREPRLVPECVI 509
LG + VP V
Sbjct: 416 LGTGNVSDCYVPTLVF 431
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 118/291 (40%), Gaps = 58/291 (19%)
Query: 398 RVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVE---TLKG--LRTT 452
++ ++ G HT +T G ++++G G FG LG G S +P VE +G +R
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIV 76
Query: 453 RVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDREPRLVPECVI--- 509
V+ G +H+ AV G ++ WG GQLG D E L P C+I
Sbjct: 77 GVAAGAYHSLAV-------------SDDGSVWCWGYNIYGQLG-FDGENSLAP-CLIKNL 121
Query: 510 -----ALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQL----GCPPADGK------ 554
+ + N G L + +G + ++ G L PP D +
Sbjct: 122 FERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLS 181
Query: 555 -----VPTRVEDKIADSFIEDIACGSYHVAVLTSKAEV-----------YTWGKGLNGQL 598
+P + D + ++ +ACG HV L ++ Y+WG +GQL
Sbjct: 182 FTSIPIPFPILDFHGRTVLK-VACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQL 240
Query: 599 GHGDNDHRNKPTLVEFLKDKQ---VKSVVCGSNFTAVVCLHKWIPSVDHSC 646
G GD + R +P VE K V + CG++ TA++ K P C
Sbjct: 241 GLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSIC 291
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Query: 513 NENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGC-PPADGKVPTRVE-------DKIA 564
+ I +A G + TIALT G VY+ G +G+LG +D VP VE D+I
Sbjct: 15 SRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIR 74
Query: 565 DSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKS 622
I +A G+YH ++ V+ WG + GQLG D ++ P L++ L +++ S
Sbjct: 75 ---IVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFERETSS 128
>AT3G53830.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:19940814-19943592 FORWARD
LENGTH=472
Length = 472
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 130/313 (41%), Gaps = 54/313 (17%)
Query: 323 GHGIEVDVFH--PKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGN 380
GH D F P L+ G+ I VA G HT A++ G ++ WG G G LG G+
Sbjct: 193 GHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYG--GEGQLGLGS 250
Query: 381 EVS-----HWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHS 435
+ H IP S + G + I+ GG T
Sbjct: 251 RIKMVSSPHLIPCLES----------IGSGKERSFILHQGGTTTT--------------- 285
Query: 436 STNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLG 495
S RE G +SCG H+AA+ G L T+G G GQ G
Sbjct: 286 SAQASRE----PGQYIKAISCGGRHSAAIT-------------DAGGLITFGWGLYGQCG 328
Query: 496 HVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPADGKV 555
H + +L P V + + + VA G TI +++ G VY G +GQLG ++
Sbjct: 329 HGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEI 388
Query: 556 PTRVED--KIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVE 613
R+ D + + ++CG+ H AVL ++ WG GQLG GD + RN PT V+
Sbjct: 389 LPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQVQ 448
Query: 614 FLKDKQVKSVVCG 626
L +++ V CG
Sbjct: 449 -LDGCRLRKVACG 460
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 131/319 (41%), Gaps = 50/319 (15%)
Query: 269 GSRSSSEMDAILPKALESKVVLDVHSIGCGYKHAVLVTKQGEIFSWGEESGGRLGHGIEV 328
G S + A P + + + + S+ G +H + ++ G+I+ WG G+LG G +
Sbjct: 193 GHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSRI 252
Query: 329 D-VFHPKLIDTLSGMNIELVACGEYHTCAVTYSGDLYTWGDGTHNSGLLGHGNEVSHWIP 387
V P LI L E + G+ + + G T + G
Sbjct: 253 KMVSSPHLIPCL-----ESIGSGKERSFILHQGGTTTTSAQASREPGQY----------- 296
Query: 388 KRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLK 447
+ +SCG H+A +T G L TFG G +G GHG+ + P V +K
Sbjct: 297 -----------IKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVK 345
Query: 448 GLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLG----HVDREPRL 503
+R V+ G+WHT + G+++ +G GQLG H + PRL
Sbjct: 346 SVRMESVAAGLWHTICI-------------SSDGKVYAFGGNQFGQLGTGTDHAEILPRL 392
Query: 504 VPECVIALGNENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPA-DGKVPTRVEDK 562
+ L ++ V+CG + L G + G YGQLG D +PT+V+
Sbjct: 393 LDG--QNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQVQ-- 448
Query: 563 IADSFIEDIACGSYHVAVL 581
+ + +ACG +H +L
Sbjct: 449 LDGCRLRKVACGWWHTLLL 467
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 158/398 (39%), Gaps = 91/398 (22%)
Query: 291 DVHSIGCGYKHAVLVTKQGEIFSWG---EESGGRLGHGIEVDVFHPKLIDTLSGMNIELV 347
DV GCG+ A+ ++++G++ +WG +E + G + P + T + +
Sbjct: 55 DVCGGGCGF--AMAISEKGKLITWGSTDDEGQSYVASGKHGETPEPFPLPTEA--PVVQA 110
Query: 348 ACGEYHTCAVTYSGDLYTWG----------DGTHNSGLLGHGNEVSHWIPKRVSGDI--- 394
+ G H VT +G+ +TWG G SG G+ S SG
Sbjct: 111 SSGWAHCAVVTETGEAFTWGWKECIPSKDPVGKQQSGSSEQGDIASQ-GSNAASGTTLQN 169
Query: 395 -------EGVRVSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLK 447
E V+ VS T TSGG F P V
Sbjct: 170 ENQKVGEESVKRRRVSTAKDETEGHTSGGDFFA-----------------TTPSLVSVGL 212
Query: 448 GLRTTRVSCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDR-----EPR 502
G+R T V+ G HT A+ + G+++ WG G +GQLG R P
Sbjct: 213 GVRITSVATGGRHTLALSDL-------------GQIWGWGYGGEGQLGLGSRIKMVSSPH 259
Query: 503 LVPECVIALGN-------------------------ENIYRVACGHSLTIALTTSGHVYT 537
L+P C+ ++G+ + I ++CG + A+T +G + T
Sbjct: 260 LIP-CLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGLIT 318
Query: 538 MGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAEVYTWGKGLNGQ 597
G YGQ G + ++ ++ +E +A G +H ++S +VY +G GQ
Sbjct: 319 FGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQ 378
Query: 598 LGHGDNDHRNKPTLV--EFLKDKQVKSVVCGSNFTAVV 633
LG G + P L+ + L+ K K+V CG+ +AV+
Sbjct: 379 LGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVL 416
>AT5G48330.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=454
Length = 454
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 166/390 (42%), Gaps = 52/390 (13%)
Query: 252 GEDISYGILGSGSMQRVGSRSSS----EMDAILPKALESKVVLDVHSIGCGYKHAVLVTK 307
GE + G G++ +G SSS MDA P + S + D+ SI G+ H++ VT
Sbjct: 41 GERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVV-SNLPSDISSISAGHYHSLAVTS 99
Query: 308 QGEIFSWGEESGGRLGHGIEVDV----FHPKLIDTLSGMNIELVACGEYHTCAVTYSGDL 363
GEI++WG G+LG I +D PK ++ L +N++ + A+ G L
Sbjct: 100 SGEIWAWGRNDEGQLGR-IVIDSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSL 158
Query: 364 YTWGDGTHNSGLLGHGNE-VSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTFG 422
+ W G G LG GN + +P RV ++ V VS G H +T G++F +G
Sbjct: 159 WVW--GRSKRGQLGLGNGIIEARVPSRVE-NLAAEHVVKVSLGWGHALALTVDGKVFGWG 215
Query: 423 ---DGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXXX 479
DG G +G +P E L + T S H A + + E E
Sbjct: 216 YVADGRVGNVG--------LPLEASLLDSI--TDGSMKGHHAAGDLNL--EAAEKKVVEA 263
Query: 480 XGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTMG 539
+ + D + EP LV E NE + +ACG ++ L G + + G
Sbjct: 264 MSK-----ENDM----PIAWEPCLVEETC----NEKVADIACGSDHSLILCHDGTLLSAG 310
Query: 540 STAYGQLGCPPAD-GKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAE--VYTWGKGLNG 596
S YGQLG D G P I +S I IA G H + ++ E + +WG +
Sbjct: 311 SNIYGQLGRSKQDLGMKPV----DITESPI-SIAAGLGHSLAICNRGERNILSWGWNRSR 365
Query: 597 QLGHGDNDHRNKPTLVEFLKDKQVKSVVCG 626
QLG G + N P VE + SV G
Sbjct: 366 QLGRGKPE--NLPREVEGFDGESPASVSAG 393
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 22/238 (9%)
Query: 399 VSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGV 458
+S +S G +H+ VTS G+++ +G G LG S + E + ++GL V
Sbjct: 84 ISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEGLENVNV---- 139
Query: 459 WHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDR--EPRLVPECVIALGNENI 516
A GV+ + G L+ WG +GQLG + E R VP V L E++
Sbjct: 140 -QAAFASGVVSAAI-----GDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEHV 192
Query: 517 YRVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIACGSY 576
+V+ G +ALT G V+ G A G++ G V +E + DS + G +
Sbjct: 193 VKVSLGWGHALALTVDGKVFGWGYVADGRV------GNVGLPLEASLLDSITDGSMKGHH 246
Query: 577 HVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAVVC 634
L +A K + D +P LVE +++V + CGS+ + ++C
Sbjct: 247 AAGDLNLEAAEK---KVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILC 301
>AT5G48330.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=455
Length = 455
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 166/391 (42%), Gaps = 53/391 (13%)
Query: 252 GEDISYGILGSGSMQRVGSRSSS----EMDAILPKALESKVVLDVHSIGCGYKHAVLVTK 307
GE + G G++ +G SSS MDA P + S + D+ SI G+ H++ VT
Sbjct: 41 GERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVV-SNLPSDISSISAGHYHSLAVTS 99
Query: 308 QGEIFSWGEESGGRLGHGIEVDV-----FHPKLIDTLSGMNIELVACGEYHTCAVTYSGD 362
GEI++WG G+LG I +D PK ++ L +N++ + A+ G
Sbjct: 100 SGEIWAWGRNDEGQLGR-IVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGS 158
Query: 363 LYTWGDGTHNSGLLGHGNE-VSHWIPKRVSGDIEGVRVSYVSCGPWHTAIVTSGGQLFTF 421
L+ W G G LG GN + +P RV ++ V VS G H +T G++F +
Sbjct: 159 LWVW--GRSKRGQLGLGNGIIEARVPSRVE-NLAAEHVVKVSLGWGHALALTVDGKVFGW 215
Query: 422 G---DGTFGALGHGDHSSTNIPREVETLKGLRTTRVSCGVWHTAAVVGVIDECVEXXXXX 478
G DG G +G +P E L + T S H A + + E E
Sbjct: 216 GYVADGRVGNVG--------LPLEASLLDSI--TDGSMKGHHAAGDLNL--EAAEKKVVE 263
Query: 479 XXGRLFTWGDGDKGQLGHVDREPRLVPECVIALGNENIYRVACGHSLTIALTTSGHVYTM 538
+ + D + EP LV E NE + +ACG ++ L G + +
Sbjct: 264 AMSK-----ENDM----PIAWEPCLVEETC----NEKVADIACGSDHSLILCHDGTLLSA 310
Query: 539 GSTAYGQLGCPPAD-GKVPTRVEDKIADSFIEDIACGSYHVAVLTSKAE--VYTWGKGLN 595
GS YGQLG D G P I +S I IA G H + ++ E + +WG +
Sbjct: 311 GSNIYGQLGRSKQDLGMKPV----DITESPIS-IAAGLGHSLAICNRGERNILSWGWNRS 365
Query: 596 GQLGHGDNDHRNKPTLVEFLKDKQVKSVVCG 626
QLG G + N P VE + SV G
Sbjct: 366 RQLGRGKPE--NLPREVEGFDGESPASVSAG 394
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 29/242 (11%)
Query: 399 VSYVSCGPWHTAIVTSGGQLFTFGDGTFGALGH----GDHSSTNIPREVETLKGLRTTRV 454
+S +S G +H+ VTS G+++ +G G LG S + P+ VE L+ +
Sbjct: 84 ISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNV--- 140
Query: 455 SCGVWHTAAVVGVIDECVEXXXXXXXGRLFTWGDGDKGQLGHVDR--EPRLVPECVIALG 512
A GV+ + G L+ WG +GQLG + E R VP V L
Sbjct: 141 -----QAAFASGVVSAAI-----GDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLA 189
Query: 513 NENIYRVACGHSLTIALTTSGHVYTMGSTAYGQLGCPPADGKVPTRVEDKIADSFIEDIA 572
E++ +V+ G +ALT G V+ G A G++ G V +E + DS +
Sbjct: 190 AEHVVKVSLGWGHALALTVDGKVFGWGYVADGRV------GNVGLPLEASLLDSITDGSM 243
Query: 573 CGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVVCGSNFTAV 632
G + L +A K + D +P LVE +++V + CGS+ + +
Sbjct: 244 KGHHAAGDLNLEAAEK---KVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLI 300
Query: 633 VC 634
+C
Sbjct: 301 LC 302
>AT1G42680.1 | Symbols: | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:16041656-16042880 FORWARD LENGTH=170
Length = 170
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/33 (69%), Positives = 29/33 (87%)
Query: 47 DESLLLWYSGKEEKQLRLSTVSKIIPGQRTATF 79
DES L+WYSGKEEKQ++LS V +I+PGQRT +F
Sbjct: 21 DESALVWYSGKEEKQIKLSQVLRIVPGQRTISF 53
>AT1G20110.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:6971554-6974578 FORWARD LENGTH=601
Length = 601
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 638 WIPSVDHSCCSGCHNPFNFRRKRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDD 697
W+P S C+ C + F +RH+C NCG VFC CT + A A +++ RVCD
Sbjct: 452 WVPDEAVSKCTSCGSDFGAFIRRHHCRNCGDVFCDKCT--QGRIALTAEDNAPQVRVCDR 509
Query: 698 CYNKLKKASESLPCVQTPSLRCVGLQ--DSRATKIQGTLLR 736
C + + S+ L + + R V LQ + A K+Q + R
Sbjct: 510 C---MAEVSQRLSNAKETTGRNVSLQSHEDLARKLQEEMER 547
>AT1G61690.1 | Symbols: | phosphoinositide binding |
chr1:22782825-22786782 REVERSE LENGTH=1171
Length = 1171
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 638 WIPSVDHSCCSGCHNPFNFRRKRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVCDD 697
W+ VD S C GC + F F ++H+C CG +FC CT + + +L P R+C+
Sbjct: 18 WV--VDASHCQGCSSQFTFINRKHHCRRCGGLFCGTCTQQ---RLSLRGQGDSPVRICEP 72
Query: 698 C 698
C
Sbjct: 73 C 73
>AT1G29800.2 | Symbols: | RING/FYVE/PHD-type zinc finger family
protein | chr1:10432736-10435046 FORWARD LENGTH=496
Length = 496
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 637 KWIPSVDHSCCSGCHNPFN-FRRKRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVC 695
KW+P S C C F+ RH+C CG +FC+ C+ KS+ + S P RVC
Sbjct: 181 KWLPDSAASACMLCSVRFHPIMCSRHHCRYCGGIFCRDCSKGKSL-VPVKFRVSDPQRVC 239
Query: 696 DDCYNKLKKASESL-----PCVQTPS 716
D C+ +L+ L P Q P+
Sbjct: 240 DVCFVRLESVQPYLMDQVSPAAQLPT 265
>AT1G29800.1 | Symbols: | RING/FYVE/PHD-type zinc finger family
protein | chr1:10432736-10435177 FORWARD LENGTH=510
Length = 510
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 637 KWIPSVDHSCCSGCHNPFN-FRRKRHNCYNCGLVFCKLCTSRKSMKAALAPNSSKPYRVC 695
KW+P S C C F+ RH+C CG +FC+ C+ KS+ + S P RVC
Sbjct: 181 KWLPDSAASACMLCSVRFHPIMCSRHHCRYCGGIFCRDCSKGKSL-VPVKFRVSDPQRVC 239
Query: 696 DDCYNKLKKASESL-----PCVQTPS 716
D C+ +L+ L P Q P+
Sbjct: 240 DVCFVRLESVQPYLMDQVSPAAQLPT 265