Miyakogusa Predicted Gene

Lj0g3v0271869.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0271869.1 Non Chatacterized Hit- tr|B9RKN8|B9RKN8_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,36.69,3e-17,FAMILY NOT NAMED,NULL; seg,NULL,CUFF.17973.1
         (891 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59975 similar to UniRef100_Q9M3A3 Cluster: Protein AB...  1758   0.0  

>gnl|LJGI|TC59975 similar to UniRef100_Q9M3A3 Cluster: Protein ABIL2; n=2; Arabidopsis
            thaliana|Rep: Protein ABIL2 - Arabidopsis thaliana
            (Mouse-ear cress), partial (79%)
          Length = 1361

 Score = 1758 bits (887), Expect = 0.0
 Identities = 890/891 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggggaagatctcaacttctgcaacacagccagtatcacaagaagcttccaattatgat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136  atggggaagatctcaacttctgcaacacagccagtatcacaagaagcttccaattatgat 195

                                                                        
Query: 61   gaggtttttatgcaacaaagcttgctgtttgatgatagtctaaaggatttgaaaaatctg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196  gaggtttttatgcaacaaagcttgctgtttgatgatagtctaaaggatttgaaaaatctg 255

                                                                        
Query: 121  agaacacaattatactcagcagccgaatattttgaactctcatacaccaatgatgaccaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256  agaacacaattatactcagcagccgaatattttgaactctcatacaccaatgatgaccaa 315

                                                                        
Query: 181  aaacaaatagtggtagacacattgaaggattatgccatcaaagcgcttgtaaatacagtg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316  aaacaaatagtggtagacacattgaaggattatgccatcaaagcgcttgtaaatacagtg 375

                                                                        
Query: 241  gatcatttaggttctgtgacatacaaagtgactgacttgttggatgagaaggtcgtagaa 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376  gatcatttaggttctgtgacatacaaagtgactgacttgttggatgagaaggtcgtagaa 435

                                                                        
Query: 301  gtttccggagccgagctacgtgtatcctgtatcgaacagagattgaggacatgccaagag 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436  gtttccggagccgagctacgtgtatcctgtatcgaacagagattgaggacatgccaagag 495

                                                                        
Query: 361  tatatggatcacgaggggcgtacccaacagtcattggtgatcagtactccaaaatttcat 420
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 496  tatatggatcacgaggggcgtacccaacagtcattggtgatcagtactacaaaatttcat 555

                                                                        
Query: 421  aagcgttatatcctgcctgttggggagaccatgcacggtgccaaccgcacaaagtcaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556  aagcgttatatcctgcctgttggggagaccatgcacggtgccaaccgcacaaagtcaaaa 615

                                                                        
Query: 481  tatgtagggtgcagcctagatgatgaagatgactggcatcacttcagaaattctgttcga 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616  tatgtagggtgcagcctagatgatgaagatgactggcatcacttcagaaattctgttcga 675

                                                                        
Query: 541  gctacaatcagagaaactccaacatctactgcaagtaaagggcgttccccatcaccttct 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676  gctacaatcagagaaactccaacatctactgcaagtaaagggcgttccccatcaccttct 735

                                                                        
Query: 601  gtacaaactcagagacctggggccttctcattcacttcaaccatgcccaaaaaagattta 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736  gtacaaactcagagacctggggccttctcattcacttcaaccatgcccaaaaaagattta 795

                                                                        
Query: 661  gagaaacggtcagtttcaccgtatcgattcccgcttctacgcactggatctcggtcaagt 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796  gagaaacggtcagtttcaccgtatcgattcccgcttctacgcactggatctcggtcaagt 855

                                                                        
Query: 721  aggcctacaacaccaagaacgagtagaccaactactccaaatccaagcagaccaattaca 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856  aggcctacaacaccaagaacgagtagaccaactactccaaatccaagcagaccaattaca 915

                                                                        
Query: 781  ccaagtccttctggtgcaagacaaaggtatccttcggagccgcgcaaatctgcttcaatg 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916  ccaagtccttctggtgcaagacaaaggtatccttcggagccgcgcaaatctgcttcaatg 975

                                                               
Query: 841  cgattacctgctgaaagagacaatggcaaagatgcagaacaataccccagt 891
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976  cgattacctgctgaaagagacaatggcaaagatgcagaacaataccccagt 1026