Miyakogusa Predicted Gene
- Lj0g3v0269409.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0269409.1 Non Chatacterized Hit- tr|I1MRV3|I1MRV3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.03,0,Hect, E3
ligase catalytic domain,HECT; HECT,HECT; Domain Homologous to E6-AP
Carboxyl Terminus,HECT;,CUFF.17808.1
(1836 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79035 similar to UniRef100_Q8RWB8 Cluster: E3 ubiquit... 2375 0.0
gnl|LJGI|BP071614 similar to UniRef100_A7Q8U7 Cluster: Chromosom... 68 2e-10
>gnl|LJGI|TC79035 similar to UniRef100_Q8RWB8 Cluster: E3 ubiquitin-protein ligase
UPL6; n=1; Arabidopsis thaliana|Rep: E3 ubiquitin-protein
ligase UPL6 - Arabidopsis thaliana (Mouse-ear cress),
partial (38%)
Length = 1215
Score = 2375 bits (1198), Expect = 0.0
Identities = 1210/1214 (99%)
Strand = Plus / Plus
Query: 541 aagaaatggtcttctttgtctgagcggttatcatacctctcaggtgatgcccctggttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aagaaatggtcttctttgtctgagcggttatcatacctctcaggtgatgcccctggttgg 61
Query: 601 ctgttacccctggctgtattctgtcctgtctacaagcatatgcttatgatagttgataat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctgttacccctggctgtattctgtcctgtctacaagcatatgcttatgatagttgataat 121
Query: 661 gaggaatattatgaacaagagaaacctctatcactgaaagatattaggagcctcatcatt 720
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaggaatattatgacctttagaaacctctatcactgaaagatattaggagcctcatcatt 181
Query: 721 ctgttgaggcaggctctgtggcagctactgtgggtgaatcataccacatctgctaattca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctgttgaggcaggctctgtggcagctactgtgggtgaatcataccacatctgctaattca 241
Query: 781 gtaaaatctctcacagttcactcaactactaaaaggctatctgttgaagccattcagctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtaaaatctctcacagttcactcaactactaaaaggctatctgttgaagccattcagctg 301
Query: 841 agggttagcaatgtggtctctgaacttctgtcccagctgcaagactggaataacagacgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agggttagcaatgtggtctctgaacttctgtcccagctgcaagactggaataacagacgg 361
Query: 901 cagtttacatcccccgttgacttccatgctgatggagtgaatgacttctttaactctcag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cagtttacatcccccgttgacttccatgctgatggagtgaatgacttctttaactctcag 421
Query: 961 gctgtcattgaaaacacacgagctaatgaaattttgaagcaggcctctttcttgatacca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gctgtcattgaaaacacacgagctaatgaaattttgaagcaggcctctttcttgatacca 481
Query: 1021 tttacaagcagggttaaaattttcacttctcaactagctgctgctaggcaaaggcatggg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tttacaagcagggttaaaattttcacttctcaactagctgctgctaggcaaaggcatggg 541
Query: 1081 tcacaggctgtatttactagaaaccggttcagaattagacgagatcatattttggaagat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tcacaggctgtatttactagaaaccggttcagaattagacgagatcatattttggaagat 601
Query: 1141 gcttataatcaaatgagtcagttgtcagaagatgatcttcgaggactgattcgtgttact 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gcttataatcaaatgagtcagttgtcagaagatgatcttcgaggactgattcgtgttact 661
Query: 1201 tttgtcaatgagtttggagttgaagaggctggaatagatggaggtggaatattcaaggat 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tttgtcaatgagtttggagttgaagaggctggaatagatggaggtggaatattcaaggat 721
Query: 1261 ttcatggagaacatcacgcgcgccgcctttgatgtgcagtatggattatttaaggaaaca 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ttcatggagaacatcacgcgcgccgcctttgatgtgcagtatggattatttaaggaaaca 781
Query: 1321 gcggatcatctgctttatcctaatcctggatcaggattgatacatgaacaacatctccaa 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gcggatcatctgctttatcctaatcctggatcaggattgatacatgaacaacatctccaa 841
Query: 1381 tttttccactttcttggtacccttcttgcaaaggccatgtttgaagggattctggttgat 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tttttccactttcttggtacccttcttgcaaaggccatgtttgaagggattctggttgat 901
Query: 1441 ttaccatttgctacattctttttgagcaaattgaagcagaagcacaactatttgaacgat 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ttaccatttgctacattctttttgagcaaattgaagcagaagcacaactatttgaacgat 961
Query: 1501 ttgccttccttggatccagaattatatcgtcatcttatatttctaaagcgttatgagggt 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ttgccttccttggatccagaattatatcgtcatcttatatttctaaagcgttatgagggt 1021
Query: 1561 gacctctcggacttggaactatactttgttatattaaacaatgaatatggtgagcaaaca 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gacctctcggacttggaactatactttgttatattaaacaatgaatatggtgagcaaaca 1081
Query: 1621 gaagaggagctgcttcctgggggaaagaacctccgtgtcactaatgagaatgtcattact 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 gaagaggagctgcttcctgggggaaagaacctccgtgtcactaatgagaatgtcattact 1141
Query: 1681 tttatccatcttgtagccaaccaccgcttgaattttcagatacgtcaacaaagtactcat 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 tttatccatcttgtagccaaccaccgcttgaattttcagatacgtcaacaaagtactcat 1201
Query: 1741 ttcctgagaggatt 1754
||||||||||||||
Sbjct: 1202 ttcctgagaggatt 1215
>gnl|LJGI|BP071614 similar to UniRef100_A7Q8U7 Cluster: Chromosome chr5 scaffold_64
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (1%)
Length = 374
Score = 67.9 bits (34), Expect = 2e-10
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1484 acaactatttgaacgatttgccttccttggatccagaattat 1525
|||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 315 acaactttttgaatgatttgccttccttggatccagaattat 274