Miyakogusa Predicted Gene

Lj0g3v0264089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264089.1 Non Chatacterized Hit- tr|I1J8I7|I1J8I7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11990
PE,76.92,0.00000000004, ,CUFF.17411.1
         (74 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g36860.2                                                        72   1e-13
Glyma11g08430.2                                                        54   5e-08
Glyma11g08430.1                                                        54   5e-08
Glyma01g36860.1                                                        54   5e-08

>Glyma01g36860.2 
          Length = 348

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/39 (76%), Positives = 35/39 (89%)

Query: 1   MKTFFYPCGTFSKIATIAKNRPICKLVIMYSVSIKVTSL 39
           MKTFFYPCGTFSKIA++A+NRPICKL IM+ VSIKV + 
Sbjct: 310 MKTFFYPCGTFSKIASVARNRPICKLAIMHCVSIKVMNF 348


>Glyma11g08430.2 
          Length = 416

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 5/37 (13%)

Query: 1   MKTFFYPCGTFSKIATIAKNRPI-----CKLVIMYSV 32
           MKTFFYPCGTFSKIA++A+NRPI     C  ++ YS+
Sbjct: 310 MKTFFYPCGTFSKIASVARNRPISSGEACNDLMAYSL 346


>Glyma11g08430.1 
          Length = 416

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 5/37 (13%)

Query: 1   MKTFFYPCGTFSKIATIAKNRPI-----CKLVIMYSV 32
           MKTFFYPCGTFSKIA++A+NRPI     C  ++ YS+
Sbjct: 310 MKTFFYPCGTFSKIASVARNRPISSGEACNDLMAYSL 346


>Glyma01g36860.1 
          Length = 415

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 5/37 (13%)

Query: 1   MKTFFYPCGTFSKIATIAKNRPI-----CKLVIMYSV 32
           MKTFFYPCGTFSKIA++A+NRPI     C  ++ YS+
Sbjct: 310 MKTFFYPCGTFSKIASVARNRPISSGEACNDLMAYSL 346