Miyakogusa Predicted Gene

Lj0g3v0264089.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0264089.1 Non Chatacterized Hit- tr|I1J8I7|I1J8I7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11990
PE,76.92,0.00000000004, ,CUFF.17411.1
         (225 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO041285 similar to UniRef100_A7R3P8 Cluster: Chromosom...   115   1e-25
gnl|LJGI|TC69596 similar to UniRef100_A7R3P8 Cluster: Chromosome...    82   2e-15

>gnl|LJGI|GO041285 similar to UniRef100_A7R3P8 Cluster: Chromosome undetermined
           scaffold_553, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_553,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (24%)
          Length = 576

 Score =  115 bits (58), Expect = 1e-25
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaagacattcttctatccctgtggaacattttcaaagattgctactattgcaaaaaac 60
           |||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||
Sbjct: 447 atgaagacattcttctatccttgtggaacattttcaaagattgctagtgttgcaaaaaac 388

                     
Query: 61  agacccatat 70
           ||||||||||
Sbjct: 387 agacccatat 378


>gnl|LJGI|TC69596 similar to UniRef100_A7R3P8 Cluster: Chromosome undetermined
          scaffold_553, whole genome shotgun sequence; n=1; Vitis
          vinifera|Rep: Chromosome undetermined scaffold_553,
          whole genome shotgun sequence - Vitis vinifera (Grape),
          partial (24%)
          Length = 562

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                           
Query: 22 tgtggaacattttcaaagattgctactattgcaaaaaacagacccatat 70
          ||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 3  tgtggaacattttcaaagattgctagtgttgcaaaaaacagacccatat 51