Miyakogusa Predicted Gene
- Lj0g3v0259259.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0259259.1 Non Chatacterized Hit- tr|K4D5U6|K4D5U6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30.81,1e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR_2,Pentatricopeptide repeat;
PPR_1,CUFF.17071.1
(474 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 538 e-153
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 538 e-153
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 213 2e-55
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 1e-47
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 182 4e-46
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 7e-44
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 7e-42
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 1e-41
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 1e-41
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 167 2e-41
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 2e-41
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 2e-41
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 2e-41
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 5e-41
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 5e-41
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 6e-41
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 7e-41
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 8e-41
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 163 3e-40
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 5e-40
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 162 5e-40
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 6e-40
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 1e-39
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 2e-39
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 2e-39
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 3e-38
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 156 3e-38
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 155 5e-38
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 7e-38
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 9e-38
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 1e-37
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 7e-37
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 8e-37
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 3e-36
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 148 7e-36
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 9e-36
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 2e-35
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 8e-35
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 141 1e-33
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 139 5e-33
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 139 5e-33
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 139 6e-33
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 7e-33
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 134 1e-31
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 2e-31
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 3e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 129 5e-30
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 8e-30
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 126 4e-29
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 5e-29
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 123 4e-28
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 8e-28
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 8e-28
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 2e-27
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 2e-27
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 120 3e-27
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 4e-27
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 9e-27
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 117 2e-26
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 115 6e-26
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 114 1e-25
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 114 2e-25
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 9e-25
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 110 2e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 6e-22
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 100 3e-21
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 100 4e-21
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 97 2e-20
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 96 5e-20
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 94 2e-19
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 94 2e-19
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 92 8e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 92 8e-19
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 92 8e-19
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 92 1e-18
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 8e-18
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 88 1e-17
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 86 6e-17
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 85 1e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 84 2e-16
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 82 6e-16
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 82 1e-15
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 81 1e-15
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 80 2e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 80 3e-15
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 5e-15
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 79 5e-15
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 5e-15
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 79 7e-15
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 79 7e-15
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 77 2e-14
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 77 3e-14
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 77 4e-14
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 7e-14
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 75 1e-13
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 74 2e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 74 3e-13
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 72 6e-13
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 70 4e-12
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 69 8e-12
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 69 8e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 69 9e-12
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 68 1e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 67 4e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 66 5e-11
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 65 9e-11
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 65 1e-10
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 64 3e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 63 4e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 63 4e-10
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 63 5e-10
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 9e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 61 2e-09
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 6e-09
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 59 6e-09
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 59 7e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 59 9e-09
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 55 1e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 538 bits (1385), Expect = e-153, Method: Compositional matrix adjust.
Identities = 247/431 (57%), Positives = 317/431 (73%), Gaps = 1/431 (0%)
Query: 44 RPFPDYSPRKPSIADADLVRHVSTTIKRRRSEPLRRVLKPFESKLNPHHLIWVLINIKND 103
RPFPDYSP+K S+ D + V ++ IK RR+EPLRR LKP+E K HLIWVL+ IK D
Sbjct: 41 RPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCD 100
Query: 104 YVLVLDFFNWARSRRDKPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQ 163
Y LVLDFF+WARSRRD +LE+LCIV+H+AVAS DLK+AQ+L+ FW P+L+V F Q
Sbjct: 101 YRLVLDFFDWARSRRD-SNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQ 159
Query: 164 FTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTR 223
F + L+YTYKDWG+ P VFDVFFQ F K+L+YG+V+SVDSCN++LTR
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
L + AI VFRE+PEVGV WN SYNIV+H +CQLG++KEAH+LL+ ME G P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
DV+SY +++GYC+ G+L+KV KL+E ++RKGL+PN Y+Y +II LLC+ ++ EAE
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
EM + G+ PD VVYTTLI GFCK G++ AA K F EM + I PD ++YT+++ G C+I
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
G MVEA KLF EM GLEPD VT+T LI G+CKAG M++AF +HN M+Q G +PNVVTY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 464 TILVDGLCKRG 474
T L+DGLCK G
Sbjct: 460 TTLIDGLCKEG 470
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 150/267 (56%), Gaps = 10/267 (3%)
Query: 208 YGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
YG ++ + L R+C E ++ F E G+ +T+ Y ++ C+ G ++
Sbjct: 319 YGSIIGL------LCRICKLAEAEE----AFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
A +M PDV++Y IISG+CQIG + + KL E+ KGL P+ + +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
+ CK G + +A RV M + G P+ V YTTLI G CK G++ +A++L EM + +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
P+ +Y S+++GLCK G + EA KL E GL D VTYT L+ +CK+GEM +A I
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
+M+ KGL P +VT+ +L++G C G
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 135/242 (55%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A RV + G S N ++Y ++ LC+ G + A+ LL +M G P++ +Y I
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
++G C+ G +E+ +KL+ E + GL + Y ++D CK+GE+ +A+ +L+EM G+
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P V + L++GFC G + KL + M K I P+ ++ S++ C + A
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
++ +M G+ PD TY L+ GHCKA M+EA+ + +M KG + +V TY++L+ G
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 472 KR 473
KR
Sbjct: 678 KR 679
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 135/243 (55%), Gaps = 2/243 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC-GNVPDVVSYGV 290
+ A + F E ++ + ++Y ++ CQ+G + EA L +M FC G PD V++
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM-FCKGLEPDSVTFTE 426
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+I+GYC+ G ++ ++ + + G PN Y +ID LCK G++ A +L EM K G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ P+ Y ++++G CKSGN+ A KL E + + D V+YT+++ CK G+M +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
++ EML GL+P VT+ L+ G C G + + + N M+ KG+ PN T+ LV
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 471 CKR 473
C R
Sbjct: 607 CIR 609
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 138/239 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A ++F E G+ +++++ +++ C+ G +K+A + M G P+VV+Y +I
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G L+ +L+ E+ + GL+PN + YN+I++ LCK+G + EA +++ E G+
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V YTTL+ +CKSG + A ++ EM K + P V++ +++G C G + + KL
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ ML G+ P+ T+ +L+ +C ++ A +I+ M +G+ P+ TY LV G CK
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 126/235 (53%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A + E ++G+ N +YN +++ LC+ G ++EA L+ + E G D V+Y ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
YC+ G+++K ++++E+ KGL+P +N +++ C +G + + E++L M G+ P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + +L+ +C N+ AA ++ +M + + PD +Y +++ G CK M EA LF
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
EM G TY+ LI G K + EA + +QM ++GL + + D
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 120/226 (53%), Gaps = 5/226 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
H++ G+ ++ + N + LC GN E A+++ E+ G++ +T++Y ++ +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIE---EAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
C+ G++ +A +L +M G P +V++ V+++G+C G LE KL+ + KG+ PN
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
+N+++ C + A + ++M GV PD Y L+ G CK+ N+ A LF
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
EMK K +Y+ ++ G K K +EA ++F +M GL D+
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 538 bits (1385), Expect = e-153, Method: Compositional matrix adjust.
Identities = 247/431 (57%), Positives = 317/431 (73%), Gaps = 1/431 (0%)
Query: 44 RPFPDYSPRKPSIADADLVRHVSTTIKRRRSEPLRRVLKPFESKLNPHHLIWVLINIKND 103
RPFPDYSP+K S+ D + V ++ IK RR+EPLRR LKP+E K HLIWVL+ IK D
Sbjct: 41 RPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCD 100
Query: 104 YVLVLDFFNWARSRRDKPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQ 163
Y LVLDFF+WARSRRD +LE+LCIV+H+AVAS DLK+AQ+L+ FW P+L+V F Q
Sbjct: 101 YRLVLDFFDWARSRRD-SNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQ 159
Query: 164 FTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTR 223
F + L+YTYKDWG+ P VFDVFFQ F K+L+YG+V+SVDSCN++LTR
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
L + AI VFRE+PEVGV WN SYNIV+H +CQLG++KEAH+LL+ ME G P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
DV+SY +++GYC+ G+L+KV KL+E ++RKGL+PN Y+Y +II LLC+ ++ EAE
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
EM + G+ PD VVYTTLI GFCK G++ AA K F EM + I PD ++YT+++ G C+I
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
G MVEA KLF EM GLEPD VT+T LI G+CKAG M++AF +HN M+Q G +PNVVTY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 464 TILVDGLCKRG 474
T L+DGLCK G
Sbjct: 460 TTLIDGLCKEG 470
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 150/267 (56%), Gaps = 10/267 (3%)
Query: 208 YGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
YG ++ + L R+C E ++ F E G+ +T+ Y ++ C+ G ++
Sbjct: 319 YGSIIGL------LCRICKLAEAEE----AFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
A +M PDV++Y IISG+CQIG + + KL E+ KGL P+ + +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
+ CK G + +A RV M + G P+ V YTTLI G CK G++ +A++L EM + +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
P+ +Y S+++GLCK G + EA KL E GL D VTYT L+ +CK+GEM +A I
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
+M+ KGL P +VT+ +L++G C G
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 135/242 (55%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A RV + G S N ++Y ++ LC+ G + A+ LL +M G P++ +Y I
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
++G C+ G +E+ +KL+ E + GL + Y ++D CK+GE+ +A+ +L+EM G+
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P V + L++GFC G + KL + M K I P+ ++ S++ C + A
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
++ +M G+ PD TY L+ GHCKA M+EA+ + +M KG + +V TY++L+ G
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 472 KR 473
KR
Sbjct: 678 KR 679
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 135/243 (55%), Gaps = 2/243 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC-GNVPDVVSYGV 290
+ A + F E ++ + ++Y ++ CQ+G + EA L +M FC G PD V++
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM-FCKGLEPDSVTFTE 426
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+I+GYC+ G ++ ++ + + G PN Y +ID LCK G++ A +L EM K G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ P+ Y ++++G CKSGN+ A KL E + + D V+YT+++ CK G+M +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
++ EML GL+P VT+ L+ G C G + + + N M+ KG+ PN T+ LV
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 471 CKR 473
C R
Sbjct: 607 CIR 609
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 138/239 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A ++F E G+ +++++ +++ C+ G +K+A + M G P+VV+Y +I
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G L+ +L+ E+ + GL+PN + YN+I++ LCK+G + EA +++ E G+
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V YTTL+ +CKSG + A ++ EM K + P V++ +++G C G + + KL
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ ML G+ P+ T+ +L+ +C ++ A +I+ M +G+ P+ TY LV G CK
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 126/235 (53%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A + E ++G+ N +YN +++ LC+ G ++EA L+ + E G D V+Y ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
YC+ G+++K ++++E+ KGL+P +N +++ C +G + + E++L M G+ P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + +L+ +C N+ AA ++ +M + + PD +Y +++ G CK M EA LF
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
EM G TY+ LI G K + EA + +QM ++GL + + D
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 120/226 (53%), Gaps = 5/226 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
H++ G+ ++ + N + LC GN E A+++ E+ G++ +T++Y ++ +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIE---EAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
C+ G++ +A +L +M G P +V++ V+++G+C G LE KL+ + KG+ PN
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
+N+++ C + A + ++M GV PD Y L+ G CK+ N+ A LF
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
EMK K +Y+ ++ G K K +EA ++F +M GL D+
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 217/431 (50%), Gaps = 13/431 (3%)
Query: 45 PFPDYSPRKPSIADADLVRHVSTTIKRRRSEPLRRVLKPFESKLNPHHLIWVLINIKNDY 104
P P +P D D V + + + + L ++ L+ + VL+ I+ DY
Sbjct: 40 PIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNKL----SDHLDSFRVKNVLLKIQKDY 95
Query: 105 VLVLDFFNWARSRRDKP-SLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDV-HHLFD 162
+L L+FFNWA++R SLE IVLH + K A++++ + +D+ +FD
Sbjct: 96 LLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFD 155
Query: 163 QFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLT 222
L+Y+Y++ + P VFD F+ F ++ YG + +V+SCN +++
Sbjct: 156 A----LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 211
Query: 223 RLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN 281
L G +G+ A+R +RE +S N + N+V+ C+ GK+ + LL ME G
Sbjct: 212 SLLG--QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
VSY +I+G+C+ G L LKL + + GL+PN +N +I C+ ++ EA +
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
V EM V P+ V Y TLI+G+ + G+ A + +++M I D ++Y +++ GLC
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
K K +A + E+ L P+ T++ALI G C F ++ M++ G PN
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQ 449
Query: 462 TYTILVDGLCK 472
T+ +LV C+
Sbjct: 450 TFNMLVSAFCR 460
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 126/222 (56%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
++ + + L K + A + MQM+ G +P V S +S G+++ L+ E++
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
R + PN Y N ++ C++G++ + +L++M + G +V Y TLI+G C+ G +S
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
+A KL + M + + P+ V++ +++HG C+ K+ EA K+F EM + + P+ VTY LI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G+ + G+ AF + MV G+ +++TY L+ GLCK+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 22/243 (9%)
Query: 252 SYNIVLHSLCQLGKVKEAHN--------------------LLMQMEFCGNVPDVVSYGVI 291
++ IVLH+L + K K A + LL C + P V + +
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV--FDSL 174
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ + + +++ G P N + L G V A R REM + +
Sbjct: 175 FKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKI 234
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ ++SG+C+SG + +L +M++ VSY +++ G C+ G + A K
Sbjct: 235 SPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALK 294
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
L + M GL+P+ VT+ LI+G C+A +++EA + +M + PN VTY L++G
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 472 KRG 474
++G
Sbjct: 355 QQG 357
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A +VF E V V+ NT++YN +++ Q G + A M G D+++Y +
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I G C+ + K + ++EL ++ L PN ++ +I C + + M + G
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC 444
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ + L+S FC++ + A ++ EM ++ I D + + +GL GK K
Sbjct: 445 HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKK 504
Query: 412 LFSEM 416
L EM
Sbjct: 505 LLQEM 509
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A R + + G+ + ++YN ++ LC+ K ++A + +++ VP+ ++ +I
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C ++ +L + + R G PNE +N ++ C+N + A +VLREM + +
Sbjct: 422 GQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
D+ + +G G KL EM+ KK + +
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 217/431 (50%), Gaps = 13/431 (3%)
Query: 45 PFPDYSPRKPSIADADLVRHVSTTIKRRRSEPLRRVLKPFESKLNPHHLIWVLINIKNDY 104
P P +P D D V + + + + L ++ L+ + VL+ I+ DY
Sbjct: 40 PIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNKL----SDHLDSFRVKNVLLKIQKDY 95
Query: 105 VLVLDFFNWARSRRDKP-SLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDV-HHLFD 162
+L L+FFNWA++R SLE IVLH + K A++++ + +D+ +FD
Sbjct: 96 LLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFD 155
Query: 163 QFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLT 222
L+Y+Y++ + P VFD F+ F ++ YG + +V+SCN +++
Sbjct: 156 A----LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 211
Query: 223 RLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN 281
L G +G+ A+R +RE +S N + N+V+ C+ GK+ + LL ME G
Sbjct: 212 SLLG--QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
VSY +I+G+C+ G L LKL + + GL+PN +N +I C+ ++ EA +
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
V EM V P+ V Y TLI+G+ + G+ A + +++M I D ++Y +++ GLC
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
K K +A + E+ L P+ T++ALI G C F ++ M++ G PN
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQ 449
Query: 462 TYTILVDGLCK 472
T+ +LV C+
Sbjct: 450 TFNMLVSAFCR 460
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 126/222 (56%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
++ + + L K + A + MQM+ G +P V S +S G+++ L+ E++
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
R + PN Y N ++ C++G++ + +L++M + G +V Y TLI+G C+ G +S
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
+A KL + M + + P+ V++ +++HG C+ K+ EA K+F EM + + P+ VTY LI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G+ + G+ AF + MV G+ +++TY L+ GLCK+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 22/243 (9%)
Query: 252 SYNIVLHSLCQLGKVKEAHN--------------------LLMQMEFCGNVPDVVSYGVI 291
++ IVLH+L + K K A + LL C + P V + +
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV--FDSL 174
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ + + +++ G P N + L G V A R REM + +
Sbjct: 175 FKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKI 234
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ ++SG+C+SG + +L +M++ VSY +++ G C+ G + A K
Sbjct: 235 SPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALK 294
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
L + M GL+P+ VT+ LI+G C+A +++EA + +M + PN VTY L++G
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 472 KRG 474
++G
Sbjct: 355 QQG 357
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A +VF E V V+ NT++YN +++ Q G + A M G D+++Y +
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I G C+ + K + ++EL ++ L PN ++ +I C + + M + G
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC 444
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ + L+S FC++ + A ++ EM ++ I D + + +GL GK K
Sbjct: 445 HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKK 504
Query: 412 LFSEM 416
L EM
Sbjct: 505 LLQEM 509
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A R + + G+ + ++YN ++ LC+ K ++A + +++ VP+ ++ +I
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C ++ +L + + R G PNE +N ++ C+N + A +VLREM + +
Sbjct: 422 GQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
D+ + +G G KL EM+ KK + +
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 203/425 (47%), Gaps = 13/425 (3%)
Query: 50 SPRKPSIADADLVRHVSTTIKRRRSEPLRRVLKPFESKLNPHHLIWVLINIKNDYVLVLD 109
SP +AD L T +KR + L + P +L+ +ND L+L
Sbjct: 18 SPSDSLLADKAL-----TFLKRHPYQ-----LHHLSANFTPEAASNLLLKSQNDQALILK 67
Query: 110 FFNWARSRRDKPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQFTERLI 169
F NWA + +L CI LHI K AQ L E A LD + F + L
Sbjct: 68 FLNWANPHQ-FFTLRCKCITLHILTKFKLYKTAQILA-EDVAAKTLDDEYASLVF-KSLQ 124
Query: 170 YTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFE 229
TY + VFD+ + H ++G + V S N L +
Sbjct: 125 ETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR 184
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
A VF+E E VS N +YNI++ C G + A L +ME G +P+VV+Y
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+I GYC++ +++ KL+ + KGL PN YN +I+ LC+ G + E VL EM +
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G D V Y TLI G+CK GN A + EM + + P ++YTS++H +CK G M A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ +M V GL P+E TYT L+ G + G M EA+ + +M G +P+VVTY L++G
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 470 LCKRG 474
C G
Sbjct: 425 HCVTG 429
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 155/249 (62%), Gaps = 3/249 (1%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
GNF +A+ + E G++ + ++Y ++HS+C+ G + A L QM G P+
Sbjct: 324 GNFH---QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
+Y ++ G+ Q G + + +++ E+ G P+ YN +I+ C G++ +A VL +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M + G+ PD V Y+T++SGFC+S +V A ++ EM +K I PD ++Y+S++ G C+ +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
EA L+ EML +GL PDE TYTALI +C G++ +A +HN+MV+KG+ P+VVTY++
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 466 LVDGLCKRG 474
L++GL K+
Sbjct: 561 LINGLNKQS 569
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 153/267 (57%), Gaps = 3/267 (1%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIR-VFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
G+ ++ S N+ + LC EG+ + + V E G S + ++YN ++ C+ G
Sbjct: 270 GLEPNLISYNVVINGLCR--EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
+A + +M G P V++Y +I C+ G + + ++ +++++ +GL PNE Y ++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
D + G + EA RVLREM +G P V Y LI+G C +G + A + ++MK+K +
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
PD VSY+++L G C+ + EA ++ EM+ G++PD +TY++LI G C+ +EA +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +M++ GL P+ TYT L++ C G
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEG 534
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 137/256 (53%), Gaps = 15/256 (5%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
AI V + E G+S + +SY+ VL C+ V EA + +M G PD ++Y +I
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C+ + ++ L EE+ R GL P+E+ Y +I+ C G++ +A ++ EM + GV P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSY---------------TSMLH 398
D V Y+ LI+G K A +L ++ ++ VP V+Y S++
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
G C G M EA ++F ML +PD Y +I+GHC+AG++R+A++++ +MV+ G
Sbjct: 614 GFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
Query: 459 NVVTYTILVDGLCKRG 474
+ VT LV L K G
Sbjct: 674 HTVTVIALVKALHKEG 689
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 149/267 (55%), Gaps = 5/267 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
++L +G+ SV + + +C GN RA+ + G+ N +Y ++
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNM---NRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
Q G + EA+ +L +M G P VV+Y +I+G+C G++E + ++E+++ KGL P+
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y+ ++ C++ +V EA RV REM + G+ PD + Y++LI GFC+ A L++EM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ + PD +YT++++ C G + +A +L +EM+ G+ PD VTY+ LI G K
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVD 468
REA + ++ + P+ VTY L++
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 131/254 (51%), Gaps = 16/254 (6%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
G+ V S + L+ C +++ + A+RV RE E G+ +T++Y+ ++ C+ + KE
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDE-ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
A +L +M G PD +Y +I+ YC G LEK L+L E+ KG+ P+ Y+ +I+
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS---------------GFCKSGNVSA 373
L K EA+R+L ++ P +V Y TLI GFC G ++
Sbjct: 564 GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTE 623
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A ++F+ M K PD +Y M+HG C+ G + +A+ L+ EM+ G VT AL+
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVK 683
Query: 434 GHCKAGEMREAFSI 447
K G++ E S+
Sbjct: 684 ALHKEGKVNELNSV 697
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 205/395 (51%), Gaps = 19/395 (4%)
Query: 87 KLNPHHLIWVLINIKNDYVLVLDF-----FNWARSRRDKPSLEALCIVLHIAVASNDLKM 141
+LNP ++ VL +ND L F F++ + SL A+ +HI V S L
Sbjct: 75 RLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAM---IHILVRSGRLSD 131
Query: 142 AQTLVFEFW---ATPRLDVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXX 198
AQ+ + RL++ + D T+ + G++ VFD+ +
Sbjct: 132 AQSCLLRMIRRSGVSRLEIVNSLDS-------TFSNCGSNDSVFDLLIRTYVQARKLREA 184
Query: 199 XXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLH 258
F L S G VS+D+CN + L + A V++E GV N + NI+++
Sbjct: 185 HEAFTLLRSKGFTVSIDACNALIGSLV-RIGWVELAWGVYQEISRSGVGINVYTLNIMVN 243
Query: 259 SLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
+LC+ GK+++ L Q++ G PD+V+Y +IS Y G +E+ +LM + KG P
Sbjct: 244 ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP 303
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
Y YN +I+ LCK+G+ A+ V EM + G+ PD+ Y +L+ CK G+V K+F
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
+M+ + +VPD V ++SM+ + G + +A F+ + GL PD V YT LI G+C+
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
G + A ++ N+M+Q+G +VVTY ++ GLCKR
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 147/303 (48%), Gaps = 40/303 (13%)
Query: 209 GIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV 266
G V + N + LC G +E RA VF E G+S ++ +Y +L C+ G V
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYE---RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 267 KEAHNLLMQM-----------------------------------EFCGNVPDVVSYGVI 291
E + M + G +PD V Y ++
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I GYC+ G + + L E+ ++G + YN I+ LCK + EA+++ EMT+ +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
FPD+ T LI G CK GN+ A +LF +MK+K+I D V+Y ++L G K+G + A +
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
++++M+ + P ++Y+ L+ C G + EAF + ++M+ K + P V+ ++ G C
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 472 KRG 474
+ G
Sbjct: 597 RSG 599
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 138/256 (53%), Gaps = 12/256 (4%)
Query: 207 SYGIVVSVDS-CNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGK 265
SY + + +D C L GN + A+ +F++ E + + ++YN +L ++G
Sbjct: 480 SYTLTILIDGHCKL------GNLQN---AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 266 VKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN 325
+ A + M +P +SY ++++ C G L + ++ +E+ K ++P + N+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
+I C++G + E L +M G PD + Y TLI GF + N+S A L +M++++
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 386 --IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
+VPD +Y S+LHG C+ +M EA + +M+ G+ PD TYT +I G + E
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 444 AFSIHNQMVQKGLTPN 459
AF IH++M+Q+G +P+
Sbjct: 711 AFRIHDEMLQRGFSPD 726
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 130/242 (53%), Gaps = 2/242 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + E + G + + ++YN +LH LC+ + EA L +M PD + ++I
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C++G L+ ++L ++++ K +R + YN ++D K G++ A+ + +M + P
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ Y+ L++ C G+++ A +++DEM K I P + SM+ G C+ G +
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM--VQKGLTPNVVTYTILVDGLC 471
+M+ G PD ++Y LIYG + M +AF + +M Q GL P+V TY ++ G C
Sbjct: 609 EKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC 668
Query: 472 KR 473
++
Sbjct: 669 RQ 670
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 145/270 (53%), Gaps = 3/270 (1%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
+++L G + V + N L LC + A ++F E E + ++ + I++ C+
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKR-KMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
LG ++ A L +M+ DVV+Y ++ G+ ++G ++ ++ ++ K + P
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y+ +++ LC G + EA RV EM + P ++ ++I G+C+SGN S ++M
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML--VMGLEPDEVTYTALIYGHCKAGE 440
+ VPD +SY ++++G + M +A L +M GL PD TY ++++G C+ +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
M+EA + +M+++G+ P+ TYT +++G
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 132/247 (53%), Gaps = 3/247 (1%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
GN + +A+ F E G+ + + Y I++ C+ G + A NL +M G DV
Sbjct: 389 GNLD---KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
V+Y I+ G C+ L + KL E+ + L P+ Y +ID CK G + A + ++
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M + + D V Y TL+ GF K G++ A +++ +M K+I+P +SY+ +++ LC G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ EA +++ EM+ ++P + ++I G+C++G + S +M+ +G P+ ++Y
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 466 LVDGLCK 472
L+ G +
Sbjct: 626 LIYGFVR 632
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 35/261 (13%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N +++++ + Q K++EAH + G + + +I +IG +E +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+E+ R G+ N Y N +++ LCK+G++ + L ++ + GV+PD V Y TLIS +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G + A +L + M K P +Y ++++GLCK GK A ++F+EML GL PD TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 429 TALIYGHCKAGEMRE-----------------------------------AFSIHNQMVQ 453
+L+ CK G++ E A N + +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 454 KGLTPNVVTYTILVDGLCKRG 474
GL P+ V YTIL+ G C++G
Sbjct: 404 AGLIPDNVIYTILIQGYCRKG 424
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 198/393 (50%), Gaps = 10/393 (2%)
Query: 82 KPFESKLNPHHLIWVLINIKNDYVLVLDFFNWARSRRD-KPSLEALCIVLHIAVASNDLK 140
K F+ L P + VL+ +K D L FF W+ +R K S+E+ CIV HI +
Sbjct: 100 KLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYY 159
Query: 141 MAQTLVFEFWATPRLDVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXX 200
A +++ E + D +FD +G VFD F
Sbjct: 160 DANSVLKEM-VLSKADCD-VFDVLWSTRNVCVPGFG----VFDALFSVLIDLGMLEEAIQ 213
Query: 201 XFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAI-RVFREYPEVGVSWNTMSYNIVLHS 259
F K+ + + SCN L R GK + R F++ G +YNI++
Sbjct: 214 CFSKMKRFRVFPKTRSCNGLLHRFAK--LGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC 271
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
+C+ G V+ A L +M+F G VPD V+Y +I G+ ++G+L+ + EE++ P+
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
YN +I+ CK G++ REM +G+ P+ V Y+TL+ FCK G + A K +
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
+M++ +VP+ +YTS++ CKIG + +A +L +EML +G+E + VTYTALI G C A
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
M+EA + +M G+ PN+ +Y L+ G K
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 142/242 (58%), Gaps = 1/242 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A R+ E +VGV WN ++Y ++ LC ++KEA L +M+ G +P++ SY +I
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 480
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+ + +++ L+L+ EL+ +G++P+ +Y I LC ++ A+ V+ EM + G+
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
++++YTTL+ + KSGN + L DEMK+ I V++ ++ GLCK + +A F
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 414 SEML-VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ + GL+ + +TA+I G CK ++ A ++ QMVQKGL P+ YT L+DG K
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660
Query: 473 RG 474
+G
Sbjct: 661 QG 662
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 131/237 (55%)
Query: 238 FREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQ 297
F E ++ + ++YN +++ C+ GK+ +M+ G P+VVSY ++ +C+
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 298 IGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVV 357
G +++ +K +++R GL PNEY Y ++ID CK G + +A R+ EM + GV + V
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 358 YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML 417
YT LI G C + + A +LF +M ++P+ SY +++HG K M A +L +E+
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 418 VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G++PD + Y I+G C ++ A + N+M + G+ N + YT L+D K G
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 118/222 (53%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
++ + L LG ++EA +M+ P S ++ + ++G+ + V + +++
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
G RP + YN +ID +CK G+V A + EM G+ PD V Y ++I GF K G +
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
F+EMK PD ++Y ++++ CK GK+ + + EM GL+P+ V+Y+ L+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
CK G M++A + M + GL PN TYT L+D CK G
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 142/295 (48%), Gaps = 37/295 (12%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
+++L G+ +V + + LC + E K A +F + GV N SYN ++H +
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLC-DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
+ A LL +++ G PD++ YG I G C + ++E +M E++ G++ N +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTK---------------------------------- 348
Y ++D K+G E +L EM +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 349 --HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
G+ + ++T +I G CK V AA LF++M QK +VPD +YTS++ G K G +
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
+EA L +M +G++ D + YT+L++G ++++A S +M+ +G+ P+ V
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 122/238 (51%), Gaps = 2/238 (0%)
Query: 220 FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
F+ LC + E + A V E E G+ N++ Y ++ + + G E +LL +M+
Sbjct: 513 FIWGLC-SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVE 338
VV++ V+I G C+ + K + + GL+ N ++ +ID LCK+ +V
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A + +M + G+ PD YT+L+ G K GNV A L D+M + + D ++YTS++
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
GL ++ +A EM+ G+ PDEV +++ H + G + EA + + +++ L
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 159/272 (58%), Gaps = 1/272 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
+ K+ G+ ++ + N + +LC + K A +VF E E GVS N ++YN ++ LC
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGR-TKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ K+ EA+ ++ QM+ G P++++Y +I G+C +G+L K L L +L+ +GL P+
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN ++ C+ G+ A ++++EM + G+ P V YT LI F +S N+ A +L M
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
++ +VPD +Y+ ++HG C G+M EA +LF M+ EP+EV Y +I G+CK G
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
A + +M +K L PNV +Y +++ LCK
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 138/244 (56%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
KK+ ++ + E GV N +YN V++ LC+ G+ K+A + +M G ++V+Y
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+I G C+ +L + K++++++ G+ PN YN +ID C G++ +A + R++ G
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ P V Y L+SGFC+ G+ S A K+ EM+++ I P V+YT ++ + M +A
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+L M +GL PD TY+ LI+G C G+M EA + MV+K PN V Y ++ G
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Query: 471 CKRG 474
CK G
Sbjct: 489 CKEG 492
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 156/273 (57%), Gaps = 2/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F++++ G V + N LT + G+ + F E + V + S+ I++ C
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGS-SSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCC 174
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ G+++++ +LL+++ G P+VV Y +I G C+ G++EK L E+ + GL NE
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y +I+ L KNG + + +M + GVFP+ Y +++ CK G A ++FDEM
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+++ + + V+Y +++ GLC+ K+ EA+K+ +M G+ P+ +TY LI G C G++
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A S+ + +GL+P++VTY ILV G C++G
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 148/259 (57%), Gaps = 1/259 (0%)
Query: 210 IVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEA 269
+V+ V S + + C E +K + + E E G S N + Y ++ C+ G++++A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEK-SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 270 HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDL 329
+L +M G V + +Y V+I+G + G ++ ++ E++Q G+ PN Y YN +++
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 330 LCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
LCK+G +A +V EM + GV + V Y TLI G C+ ++ A+K+ D+MK I P+
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
++Y +++ G C +GK+ +A L ++ GL P VTY L+ G C+ G+ A +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 450 QMVQKGLTPNVVTYTILVD 468
+M ++G+ P+ VTYTIL+D
Sbjct: 398 EMEERGIKPSKVTYTILID 416
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 136/243 (55%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++A +F E ++G+ N +Y ++++ L + G K+ + +M+ G P++ +Y +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
++ C+ G+ + ++ +E++ +G+ N YN +I LC+ ++ EA +V+ +M G+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ + Y TLI GFC G + A L ++K + + P V+Y ++ G C+ G A K
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+ EM G++P +VTYT LI ++ M +A + M + GL P+V TY++L+ G C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 472 KRG 474
+G
Sbjct: 455 IKG 457
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 156/262 (59%), Gaps = 2/262 (0%)
Query: 213 SVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNL 272
+V + + + LCG+ E K A+ + +E E G+ N +Y +++ SLC K ++A L
Sbjct: 322 TVRTYTVLIKSLCGS-ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 273 LMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK 332
L QM G +P+V++Y +I+GYC+ G +E + ++E ++ + L PN YN +I CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 333 NGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS 392
+ V +A VL +M + V PD V Y +LI G C+SGN +A++L M + +VPD +
Sbjct: 441 SN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 393 YTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMV 452
YTSM+ LCK ++ EA LF + G+ P+ V YTALI G+CKAG++ EA + +M+
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 453 QKGLTPNVVTYTILVDGLCKRG 474
K PN +T+ L+ GLC G
Sbjct: 560 SKNCLPNSLTFNALIHGLCADG 581
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 144/275 (52%), Gaps = 34/275 (12%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +VF E P G N ++Y ++H LC ++ EA +L ++M+ P V +Y V+I
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C + + L L++E++ G++PN + Y +ID LC + +A +L +M + G+ P
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 354 DNVVYTTLISGFCKSG----------------------------------NVSAAHKLFD 379
+ + Y LI+G+CK G NV A + +
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN 451
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
+M ++K++PD V+Y S++ G C+ G A++L S M GL PD+ TYT++I CK+
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ EA + + + QKG+ PNVV YT L+DG CK G
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 150/273 (54%), Gaps = 6/273 (2%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
++L G++ +V + N + C G E A+ V +S NT +YN ++ C
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIED---AVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ V +A +L +M +PDVV+Y +I G C+ G + +L+ + +GL P+++
Sbjct: 440 K-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y ++ID LCK+ V EA + + + GV P+ V+YT LI G+CK+G V AH + ++M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K +P+ +++ +++HGLC GK+ EA L +M+ +GL+P T T LI+ K G+
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A+S QM+ G P+ TYT + C+ G
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 124/237 (52%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
+V+ E E V N +YN +++ C+LG V+EA+ + ++ G PD +Y +I GY
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
CQ L+ K+ E+ KG R NE Y ++I LC + EA + +M FP
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
YT LI C S S A L EM++ I P+ +YT ++ LC K +A +L +
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
ML GL P+ +TY ALI G+CK G + +A + M + L+PN TY L+ G CK
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 122/222 (54%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
YN +L+SL + G V E + M+M P++ +Y +++GYC++G +E+ + + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
GL P+ + Y ++I C+ ++ A +V EM G + V YT LI G C + +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A LF +MK + P +YT ++ LC + EA L EM G++P+ TYT LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
C + +A + QM++KGL PNV+TY L++G CKRG
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 126/237 (53%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+ V + E V + ++YN ++ C+ G A+ LL M G VPD +Y +I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
C+ ++E+ L + L++KG+ PN +Y +ID CK G+V EA +L +M
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+++ + LI G C G + A L ++M + + P + T ++H L K G A+
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
F +ML G +PD TYT I +C+ G + +A + +M + G++P++ TY+ L+ G
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 139/271 (51%), Gaps = 5/271 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
+K+L ++ V + N + C GNF+ R + + + V W +Y ++ S
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW---TYTSMIDS 506
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
LC+ +V+EA +L +E G P+VV Y +I GYC+ G++++ ++E++ K PN
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
+N +I LC +G++ EA + +M K G+ P T LI K G+ A+ F
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
+M PD +YT+ + C+ G++++A + ++M G+ PD TY++LI G+ G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ AF + +M G P+ T+ L+ L
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 186/408 (45%), Gaps = 37/408 (9%)
Query: 95 WVLINIKNDYVLVLDFFNWA-------RSRRDKPSLEALCIVLHIAVASNDLKMAQTLVF 147
+ L+++ ND LV D + + +S+R + + + + V N + M L+
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN-VVMYTALID 540
Query: 148 EFWATPRLDVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLS 207
+ ++D HL E+++ K+ + L F+ K++
Sbjct: 541 GYCKAGKVDEAHLM---LEKMLS--KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 208 YGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGK 265
G+ +V + + + RL G+F+ A F++ G + +Y + + C+ G+
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFD---HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 266 VKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN 325
+ +A +++ +M G PD+ +Y +I GY +GQ +++ ++ G P+++ + +
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 326 IID---------------LLCKNGEVVEAERV---LREMTKHGVFPDNVVYTTLISGFCK 367
+I LC ++E + V L +M +H V P+ Y LI G C+
Sbjct: 713 LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICE 772
Query: 368 SGNVSAAHKLFDEMKQKK-IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
GN+ A K+FD M++ + I P + + ++L CK+ K EA K+ +M+ +G P
Sbjct: 773 VGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLE 832
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ LI G K GE S+ ++Q G + + + I++DG+ K+G
Sbjct: 833 SCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQG 880
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 157/303 (51%), Gaps = 8/303 (2%)
Query: 175 WGAHPLV--FDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKK 232
WG P V F+V + + SYG+V + F T + G E
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT---FTTVMQGYIEEGD 239
Query: 233 --RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC-GNVPDVVSYG 289
A+R+ + E G SW+ +S N+++H C+ G+V++A N + +M G PD ++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+++G C+ G ++ +++M+ + ++G P+ Y YN++I LCK GEV EA VL +M
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
P+ V Y TLIS CK V A +L + K I+PD ++ S++ GLC A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+LF EM G EPDE TY LI C G++ EA ++ QM G +V+TY L+DG
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 470 LCK 472
CK
Sbjct: 480 FCK 482
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 153/270 (56%), Gaps = 1/270 (0%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
+L G V + N ++ LC E K+ A+ V + S NT++YN ++ +LC+
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKE-AVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
+V+EA L + G +PDV ++ +I G C ++L EE++ KG P+E+ YN
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+ID LC G++ EA +L++M G + Y TLI GFCK+ A ++FDEM+
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
+ + V+Y +++ GLCK ++ +A +L +M++ G +PD+ TY +L+ C+ G++++A
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I M G P++VTY L+ GLCK G
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 142/271 (52%), Gaps = 2/271 (0%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
L S GI+ V + N + LC + A+ +F E G + +YN+++ SLC G
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLT-RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K+ EA N+L QME G V++Y +I G+C+ + + ++ +E++ G+ N YN
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+ID LCK+ V +A +++ +M G PD Y +L++ FC+ G++ A + M
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD V+Y +++ GLCK G++ A KL + + G+ Y +I G + + EA
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA 629
Query: 445 FSIHNQMV-QKGLTPNVVTYTILVDGLCKRG 474
++ +M+ Q P+ V+Y I+ GLC G
Sbjct: 630 INLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 141/272 (51%), Gaps = 2/272 (0%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
K+ +GI V + N+ + LC + + AI + + P G+ + ++ V+ +
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQ-LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK-GLRPNEYV 322
G + A + QM G VS VI+ G+C+ G++E L ++E+ + G P++Y
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
+N +++ LCK G V A ++ M + G PD Y ++ISG CK G V A ++ D+M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
+ P+ V+Y +++ LCK ++ EA +L + G+ PD T+ +LI G C R
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + +M KG P+ TY +L+D LC +G
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 121/232 (52%), Gaps = 1/232 (0%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
E G+ +T YN +L+ L +K +M G PDV ++ V+I C+ QL
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ ++E++ GL P+E + ++ + G++ A R+ +M + G NV ++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 363 SGFCKSGNVSAAHKLFDEM-KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
GFCK G V A EM Q PD ++ ++++GLCK G + A ++ ML G
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+PD TY ++I G CK GE++EA + +QM+ + +PN VTY L+ LCK
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLME-EL 311
Y +L L + G + +L M+ ++ ++I Y Q +++L +++ +
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
GL+P+ + YN +++LL + E +M+ G
Sbjct: 146 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG--------------------- 184
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
I PD ++ ++ LC+ ++ A + +M GL PDE T+T +
Sbjct: 185 --------------IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ G+ + G++ A I QMV+ G + + V+ ++V G CK G
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEG 273
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 151/256 (58%), Gaps = 5/256 (1%)
Query: 221 LTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
L RLC GN A+ +FR+ E + + + Y+IV+ SLC+ G +A +L +ME
Sbjct: 217 LNRLCKSGN---SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
G DVV+Y +I G C G+ + K++ E+ + + P+ ++ +ID+ K G+++E
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A+ + EM G+ PD + Y +LI GFCK + A+++FD M K PD V+Y+ +++
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
CK ++ + +LF E+ GL P+ +TY L+ G C++G++ A + +MV +G+ P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 459 NVVTYTILVDGLCKRG 474
+VVTY IL+DGLC G
Sbjct: 454 SVVTYGILLDGLCDNG 469
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 156/310 (50%), Gaps = 40/310 (12%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F K+ I SV ++ + LC G+F+ A+ +F E G+ + ++Y+ ++
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFD---DALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
LC GK + +L +M +PDVV++ +I + + G+L + +L E+ +G+ P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
YN++ID CK + EA ++ M G PD V Y+ LI+ +CK+ V +LF
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
E+ K ++P+ ++Y +++ G C+ GK+ A +LF EM+ G+ P VTY L+ G C G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 440 EMREAFSIHNQMVQ-----------------------------------KGLTPNVVTYT 464
E+ +A I +M + KG+ P+VVTY
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 465 ILVDGLCKRG 474
+++ GLCK+G
Sbjct: 530 VMIGGLCKKG 539
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 140/246 (56%), Gaps = 1/246 (0%)
Query: 228 FEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVV 286
EG+ A+ + E+ + ++ + +++ LC G+V EA L+ +M G PD V
Sbjct: 152 LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+YG +++ C+ G L L +++ + ++ + Y+ +ID LCK+G +A + EM
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
G+ D V Y++LI G C G K+ EM + I+PD V++++++ K GK+
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
+EA +L++EM+ G+ PD +TY +LI G CK + EA + + MV KG P++VTY+IL
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 467 VDGLCK 472
++ CK
Sbjct: 392 INSYCK 397
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 137/240 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A V ++G +T++++ +++ C G+V EA L+ +M PD+V+ +I+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C G++ + L L++ + G +P+E Y +++ LCK+G A + R+M + +
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
V Y+ +I CK G+ A LF+EM+ K I D V+Y+S++ GLC GK + K+
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM+ + PD VT++ALI K G++ EA ++N+M+ +G+ P+ +TY L+DG CK
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 137/240 (57%), Gaps = 1/240 (0%)
Query: 229 EGKK-RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A ++ E G++ +T++YN ++ C+ + EA+ + M G PD+V+
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y ++I+ YC+ +++ ++L E+ KGL PN YN ++ C++G++ A+ + +EM
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
GV P V Y L+ G C +G ++ A ++F++M++ ++ Y ++HG+C K+
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+A LF + G++PD VTY +I G CK G + EA + +M + G TP+ TY IL+
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 130/230 (56%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ + + I+++ C+ K+ A ++L + G PD +++ +++G+C G++ +
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+ L++ + RP+ + +I+ LC G V EA ++ M ++G PD V Y +++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
CKSGN + A LF +M+++ I V Y+ ++ LCK G +A LF+EM + G++ D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
VTY++LI G C G+ + + +M+ + + P+VVT++ L+D K G
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 119/229 (51%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G + ++Y+I+++S C+ +V + L ++ G +P+ ++Y ++ G+CQ G+L
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+L +E+ +G+ P+ Y ++D LC NGE+ +A + +M K + +Y +I G
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
C + V A LF + K + PD V+Y M+ GLCK G + EA LF +M G PD
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ TY LI H + + + +M G + + T +++D L R
Sbjct: 560 DFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
KV +A +L M +P + + + S + Q + VL + ++ G+ + Y
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I+ C+ +++ A VL K G PD + ++TL++GFC G VS A L D M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
K PD V+ +++++GLC G++ EA L M+ G +PDEVTY ++ CK+G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +M ++ + +VV Y+I++D LCK G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 163/310 (52%), Gaps = 40/310 (12%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
+ ++L G ++V N+ + + C GN A +VF E + + +S+N +++
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISD---AQKVFDEITKRSLQPTVVSFNTLING 284
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
C++G + E L QME PDV +Y +I+ C+ +++ L +E+ ++GL PN
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 320 EYV-----------------------------------YNNIIDLLCKNGEVVEAERVLR 344
+ + YN +++ CKNG++V A ++
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
M + G+ PD + YTTLI GFC+ G+V A ++ EM Q I D V +++++ G+CK G
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
++++A + EML G++PD+VTYT ++ CK G+ + F + +M G P+VVTY
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 465 ILVDGLCKRG 474
+L++GLCK G
Sbjct: 525 VLLNGLCKLG 534
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 130/226 (57%), Gaps = 3/226 (1%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ + + YN +++ C+ G + A N++ M G PD ++Y +I G+C+ G +E
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
L++ +E+ + G+ + ++ ++ +CK G V++AER LREM + G+ PD+V YT ++
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
FCK G+ KL EM+ VP V+Y +L+GLCK+G+M A L ML +G+ PD
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
++TY L+ GH + + + Q + G+ ++ +Y +V+ L
Sbjct: 555 DITYNTLLEGHHRHANSSKRYI---QKPEIGIVADLASYKSIVNEL 597
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 125/233 (53%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F E + G+ N + + ++H + G++ +M G PD+V Y +++G+C
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ G L +++ + R+GLRP++ Y +ID C+ G+V A + +EM ++G+ D V
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
++ L+ G CK G V A + EM + I PD V+YT M+ CK G KL EM
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
G P VTY L+ G CK G+M+ A + + M+ G+ P+ +TY L++G
Sbjct: 512 QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 95/172 (55%), Gaps = 3/172 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + +E + G+ + + ++ ++ +C+ G+V +A L +M G PD V+Y +++
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+C+ G + KL++E+Q G P+ YN +++ LCK G++ A+ +L M GV P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
D++ Y TL+ G + N S K + + + IV D SY S+++ L + K
Sbjct: 554 DDITYNTLLEGHHRHANSS---KRYIQKPEIGIVADLASYKSIVNELDRASK 602
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 143/241 (59%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + R+ E + + + Y+I++ LC+ G + A NL +ME G ++++Y ++I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C G+ + KL+ ++ ++ + PN ++ +ID K G++ EAE + +EM G+ P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D + YT+LI GFCK ++ A+++ D M K P+ ++ +++G CK ++ + +LF
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+M + G+ D VTY LI G C+ G++ A + +MV + + PN+VTY IL+DGLC
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 474 G 474
G
Sbjct: 487 G 487
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 154/270 (57%), Gaps = 10/270 (3%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
H L + I+++ C +LC F + I++ G NT++++ +++ LC
Sbjct: 121 HNLYTLSIMIN---CFCRCRKLCLAFSAMGKIIKL-------GYEPNTITFSTLINGLCL 170
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
G+V EA L+ +M G+ PD+++ +++G C G+ + + L++++ G +PN
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y +++++CK+G+ A +LR+M + + D V Y+ +I G CK G++ A LF+EM+
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K I + ++Y ++ G C G+ + KL +M+ + P+ VT++ LI K G++R
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EA +H +M+ +G+ P+ +TYT L+DG CK
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 154/273 (56%), Gaps = 1/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F+++ GI ++ + N+ + C N ++ R+ + ++ N +++++++ S
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFC-NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK++EA L +M G PD ++Y +I G+C+ L+K ++++ + KG PN
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+N +I+ CK + + + R+M+ GV D V Y TLI GFC+ G ++ A +LF EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+K+ P+ V+Y +L GLC G+ +A ++F ++ +E D Y +I+G C A ++
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A+ + + KG+ P V TY I++ GLCK+G
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 143/254 (56%), Gaps = 3/254 (1%)
Query: 220 FLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
+ LC EG+ A+ + E+G + ++ N +++ LC GK EA L+ +M
Sbjct: 164 LINGLC--LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
G P+ V+YG +++ C+ GQ ++L+ +++ + ++ + Y+ IID LCK+G +
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A + EM G+ + + Y LI GFC +G KL +M ++KI P+ V+++ ++
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
K GK+ EA +L EM+ G+ PD +TYT+LI G CK + +A + + MV KG P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 459 NVVTYTILVDGLCK 472
N+ T+ IL++G CK
Sbjct: 402 NIRTFNILINGYCK 415
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 134/230 (58%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G++ N + +I+++ C+ K+ A + + ++ G P+ +++ +I+G C G++ +
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
L+L++ + G +P+ N +++ LC +G+ EA ++ +M ++G P+ V Y +++
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
CKSG + A +L +M+++ I D V Y+ ++ GLCK G + A LF+EM + G+ +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+TY LI G C AG + + M+++ + PNVVT+++L+D K G
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG 347
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 133/240 (55%), Gaps = 1/240 (0%)
Query: 229 EGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK R A + +E G++ +T++Y ++ C+ + +A+ ++ M G P++ +
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
+ ++I+GYC+ +++ L+L ++ +G+ + YN +I C+ G++ A+ + +EM
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
V P+ V Y L+ G C +G A ++F+++++ K+ D Y ++HG+C K+
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+A LF + + G++P TY +I G CK G + EA + +M + G P+ TY IL+
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 13/225 (5%)
Query: 250 TMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLME 309
T Y++VL +LC+ QME G ++ + ++I+ +C+ +L M
Sbjct: 101 TKQYDLVL-ALCK------------QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 310 ELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSG 369
++ + G PN ++ +I+ LC G V EA ++ M + G PD + TL++G C SG
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 370 NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYT 429
+ A L D+M + P+ V+Y +L+ +CK G+ A +L +M ++ D V Y+
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+I G CK G + AF++ N+M KG+T N++TY IL+ G C G
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 312
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G N ++NI+++ C+ ++ + L +M G V D V+Y +I G+C++G+L
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+L +E+ + + PN Y ++D LC NGE +A + ++ K + D +Y +I G
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
C + V A LF + K + P +Y M+ GLCK G + EA LF +M G PD
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
TY LI H G+ ++ + ++ + G + + T +++D L
Sbjct: 578 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 115/210 (54%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K +A +L M +P V+ + + S + Q + VL L ++++ KG+ N Y +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I+ C+ ++ A + ++ K G P+ + ++TLI+G C G VS A +L D M +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD ++ ++++GLC GK EA L +M+ G +P+ VTY ++ CK+G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +M ++ + + V Y+I++DGLCK G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
+ +FR+ GV +T++YN ++ C+LGK+ A L +M P++V+Y +++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C G+ EK L++ E++++ + + +YN II +C +V +A + + GV P
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
Y +I G CK G +S A LF +M++ PD +Y ++ G ++ KL
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
E+ G D T +I G ++++F
Sbjct: 602 EELKRCGFSVDASTIKMVI-DMLSDGRLKKSF 632
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 177 AHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIR 236
A + ++ Q F +++S + ++ + + L LC N E +K A+
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK-ALE 494
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F + + + + YNI++H +C KV +A +L + G P V +Y ++I G C
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
+ G L + L +++ G P+ + YN +I +G+ ++ +++ E+ + G D
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F K+ + + + N+ + +C N A +F P GV +YNI++ LC
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMC-NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ G + EA L +ME G+ PD +Y ++I + G K +KL+EEL+R G +
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614
Query: 322 VYNNIIDLL 330
+ID+L
Sbjct: 615 TIKMVIDML 623
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 142/241 (58%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V + G N SY I++ C+LGK+ EA+N+L +M G P+ V + +IS
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+C+ ++ + +++ E+ RKG +P+ Y +N++I LC+ E+ A +LR+M GV
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V Y TLI+ F + G + A KL +EM + D ++Y S++ GLC+ G++ +A LF
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ML G P ++ LI G C++G + EA +MV +G TP++VT+ L++GLC+
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 474 G 474
G
Sbjct: 648 G 648
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 135/230 (58%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ + +YN +++ + G V A +L M G P+V SY +++ G+C++G++++
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
++ E+ GL+PN +N +I CK + EA + REM + G PD + +LISG
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
C+ + A L +M + +V + V+Y ++++ + G++ EA KL +EM+ G D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
E+TY +LI G C+AGE+ +A S+ +M++ G P+ ++ IL++GLC+ G
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 136/237 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +FRE P G + ++N ++ LC++ ++K A LL M G V + V+Y +I+
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + G++++ KL+ E+ +G +E YN++I LC+ GEV +A + +M + G P
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
N+ LI+G C+SG V A + EM + PD V++ S+++GLC+ G++ + +F
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
++ G+ PD VT+ L+ CK G + +A + ++ ++ G PN T++IL+ +
Sbjct: 658 RKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 207/450 (46%), Gaps = 58/450 (12%)
Query: 79 RVLKPFE--------SKLNPHHLIWVLINIKNDYVLVLDFFNWARSRRD-KPSLEALCIV 129
++LKPF+ K+ P L + L+ + + ++ F+W S+ + S + ++
Sbjct: 59 KLLKPFDLDSLRNSFHKITPFQL-YKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVL 117
Query: 130 LHIAVASNDLKMAQTLVFE-------FWATPRLDVHHLFDQF-----TERLIYTYKD-WG 176
+ A+ + K L+ + F + + + +D+ T RL+ ++ +
Sbjct: 118 IGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYS 177
Query: 177 AHPLV--FDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRA 234
P ++V + F+ +LS I ++ + + + C E A
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE-IDSA 236
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
+ + R+ + G N++ Y ++HSL + +V EA LL +M G VPD ++ +I G
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK---------------------- 332
C+ ++ + K++ + +G P++ Y +++ LCK
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIF 356
Query: 333 ---------NGEVVEAERVLREM-TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
+G + +A+ VL +M T +G+ PD Y +LI G+ K G V A ++ +M+
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K P+ SYT ++ G CK+GK+ EA+ + +EM GL+P+ V + LI CK +
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EA I +M +KG P+V T+ L+ GLC+
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 132/244 (54%), Gaps = 5/244 (2%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A VF + + ++ +V+ + C + ++ A +LL M G VP+ V Y +
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I + ++ + L+L+EE+ G P+ +N++I LCK + EA +++ M G
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD++ Y L++G CK G V AA LF + + P+ V + +++HG G++ +A
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 412 LFSEMLV-MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ S+M+ G+ PD TY +LIYG+ K G + A + + M KG PNV +YTILVDG
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 471 CKRG 474
CK G
Sbjct: 435 CKLG 438
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 129/231 (55%), Gaps = 1/231 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ G V + N ++ LC + K A+ + R+ GV NT++YN ++++
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ G++KEA L+ +M F G+ D ++Y +I G C+ G+++K L E++ R G P+
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
N +I+ LC++G V EA +EM G PD V + +LI+G C++G + +F ++
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKL 660
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
+ + I PD V++ +++ LCK G + +A L E + G P+ T++ L+
Sbjct: 661 QAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 116/240 (48%), Gaps = 22/240 (9%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I + R+Y + G T + + ++ +++N++++ +++SG
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLE--------------ILVSG 195
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
C + + ++ + + P + + ++ C E+ A +LR+MTKHG P+
Sbjct: 196 NCH----KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN 251
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
+V+Y TLI K V+ A +L +EM VPD ++ ++ GLCK ++ EA K+ +
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
ML+ G PD++TY L+ G CK G + A + ++ + P +V + L+ G G
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHG 367
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 105/199 (52%), Gaps = 1/199 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
++S G+V + + N + E K A ++ E G + ++YN ++ LC
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGE-IKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ G+V +A +L +M G+ P +S ++I+G C+ G +E+ ++ +E+ +G P+
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+N++I+ LC+ G + + + R++ G+ PD V + TL+S CK G V A L DE
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEG 695
Query: 382 KQKKIVPDFVSYTSMLHGL 400
+ VP+ +++ +L +
Sbjct: 696 IEDGFVPNHRTWSILLQSI 714
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 139/241 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+RV +E E G++ + YN ++ L + ++ EA + L++M G P+ +YG IS
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
GY + + K ++E++ G+ PN+ + +I+ CK G+V+EA R M G+
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D YT L++G K+ V A ++F EM+ K I PD SY +++G K+G M +A +F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM+ GL P+ + Y L+ G C++GE+ +A + ++M KGL PN VTY ++DG CK
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 474 G 474
G
Sbjct: 711 G 711
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 149/280 (53%), Gaps = 38/280 (13%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A +R + G+ + +Y ++++ L + KV +A + +M G PDV SYGV+I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+G+ ++G ++K + +E+ +GL PN +YN ++ C++GE+ +A+ +L EM+ G+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+ V Y T+I G+CKSG+++ A +LFDEMK K +VPD YT+++ G C++ + A +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 413 F------------------------------SEMLVMGLE--------PDEVTYTALIYG 434
F +E+L ++ P++VTY +I
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 435 HCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
CK G + A + +QM L P V+TYT L++G K G
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 144/267 (53%), Gaps = 5/267 (1%)
Query: 210 IVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
IV+S + + +C G+ +G A + +E G N + Y ++ + Q +
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDG---AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
+A +L +M+ G PD+ Y +I G + ++++ + E+ GL+PN + Y I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
+ E A++ ++EM + GV P+ V+ T LI+ +CK G V A + M + I+
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
D +YT +++GL K K+ +A ++F EM G+ PD +Y LI G K G M++A SI
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
++MV++GLTPNV+ Y +L+ G C+ G
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 152/313 (48%), Gaps = 53/313 (16%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
+ SYG++++ ++L GN + +A +F E E G++ N + YN++L C+ G
Sbjct: 627 VFSYGVLIN------GFSKL-GNMQ---KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
++++A LL +M G P+ V+Y II GYC+ G L + +L +E++ KGL P+ +VY
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 325 NIIDLLCKNGEVVEAERVLREMTK---------------------------------HGV 351
++D C+ +V A + K G
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 352 F-----PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
F P++V Y +I CK GN+ AA +LF +M+ ++P ++YTS+L+G K+G+
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM-----VQKGLTPNVV 461
E +F E + G+EPD + Y+ +I K G +A + +QM V G ++
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916
Query: 462 TYTILVDGLCKRG 474
T L+ G K G
Sbjct: 917 TCRALLSGFAKVG 929
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 138/279 (49%), Gaps = 38/279 (13%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A + +E E GV N + +++ C+ GKV EA + M G + D +Y V+++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G + +++ ++ E++ KG+ P+ + Y +I+ K G + +A + EM + G+ P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ ++Y L+ GFC+SG + A +L DEM K + P+ V+Y +++ G CK G + EA +LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIH------------------NQMVQKG 455
EM + GL PD YT L+ G C+ ++ A +I N + + G
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 456 LT--------------------PNVVTYTILVDGLCKRG 474
T PN VTY I++D LCK G
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 139/274 (50%), Gaps = 9/274 (3%)
Query: 203 HKLLSYGIVVS---VDSCNLFLTRLCGNFEG-KKRAIRVFREYPEVGVSWNTMSYNIVLH 258
H+++S+GI + D C +++ EG ++A +F G+ +Y ++
Sbjct: 336 HEMVSHGINIKPYMYDCCICVMSK-----EGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 259 SLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
C+ V++ + LL++M+ V +YG ++ G C G L+ +++E+ G RP
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
N +Y +I +N +A RVL+EM + G+ PD Y +LI G K+ + A
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
EM + + P+ +Y + + G + + A K EM G+ P++V T LI +CK
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
G++ EA S + MV +G+ + TYT+L++GL K
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 123/230 (53%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G++ Y+ + + + G +++A L M G +P +Y +I GYC+ + +
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+L+ E++++ + + Y Y ++ +C +G++ A +++EM G P+ V+YTTLI
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
F ++ A ++ EMK++ I PD Y S++ GL K +M EA EM+ GL+P+
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY A I G+ +A E A +M + G+ PN V T L++ CK+G
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 119/221 (53%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
+Y++++ LC++ ++++A +LL++M+ G D +Y ++I G + + L+ E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
G+ Y+Y+ I ++ K G + +A+ + M G+ P Y +LI G+C+ NV
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
++L EMK++ IV +Y +++ G+C G + A+ + EM+ G P+ V YT L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
I + +A + +M ++G+ P++ Y L+ GL K
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 176/409 (43%), Gaps = 36/409 (8%)
Query: 87 KLNPHHLIWVLINIK-NDYVLVLDFFNWARSRR------DKPSLEALCIVLHIAVASNDL 139
++NP ++ VL + + +D +L FFNW S++ D S AL + + L
Sbjct: 59 EINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLC-NFGSFEKAL 117
Query: 140 KMAQTLVFEFWATPRLDVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXX 199
+ + ++ W P +V + ++ + D ++F + F
Sbjct: 118 SVVERMIERNW--PVAEVWSSIVRCSQEFVGKSDD----GVLFGILFDGYIAKGYIEEAV 171
Query: 200 XXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F + +V + C + L L + V++ E V ++ +Y++++ +
Sbjct: 172 FVFSSSMGLELVPRLSRCKVLLDALL-RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIA 230
Query: 260 LCQLGKVKEAHNLLMQME--------------------FC-GNVPDVVSYGVIISGYCQI 298
C+ G V+ ++L + E C G VP +Y V+I G C+I
Sbjct: 231 HCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKI 290
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
+LE L+ E+ G+ + + Y+ +ID L K A+ ++ EM HG+ +Y
Sbjct: 291 KRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMY 350
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
I K G + A LFD M ++P +Y S++ G C+ + + ++L EM
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+ TY ++ G C +G++ A++I +M+ G PNVV YT L+
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 10/227 (4%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK---EAHNLLMQMEFCG- 280
C +RAI +F + G + +T +N +++ + + GK + E N LM F
Sbjct: 742 CCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 281 NVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAE 340
P+ V+Y ++I C+ G LE +L ++Q L P Y ++++ K G E
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT-----S 395
V E G+ PD+++Y+ +I+ F K G + A L D+M K V D + +
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
+L G K+G+M A K+ M+ + PD T LI C + R
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 111/297 (37%), Gaps = 75/297 (25%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQM-------------------EFCGNVPDVVSYGVII 292
S++ + LC G ++A +++ +M EF G D V +G++
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
GY G +E+ + + L P ++D L + + V + M + V
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218
Query: 353 PDNVVYTTLISGFCKSGNV---------------------SAAHKLFDEMKQKKIVPDFV 391
D Y LI C++GNV A KL + M K +VP
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278
Query: 392 SYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG----------------- 434
+Y ++ GLCKI ++ +A L EM +G+ D TY+ LI G
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 435 ------------HC------KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
C K G M +A ++ + M+ GL P Y L++G C+
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCRE 395
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 144/244 (59%), Gaps = 1/244 (0%)
Query: 232 KRAIRVFREYP-EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
+ A++VF EV + N++SY+I++H LC++G+++EA L QM G P +Y V
Sbjct: 247 RDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTV 306
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+I C G ++K L +E+ +G +PN + Y +ID LC++G++ EA V R+M K
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+FP + Y LI+G+CK G V A +L M+++ P+ ++ ++ GLC++GK +A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
L ML GL PD V+Y LI G C+ G M A+ + + M + P+ +T+T +++
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 471 CKRG 474
CK+G
Sbjct: 487 CKQG 490
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 142/277 (51%), Gaps = 35/277 (12%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A +F E G N +Y +++ LC+ GK++EA+ + +M P V++Y +I
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+GYC+ G++ +L+ ++++ +PN +N +++ LC+ G+ +A +L+ M +G+
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD V Y LI G C+ G+++ A+KL M I PD +++T++++ CK GK A
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK------------------ 454
ML G+ DEVT T LI G CK G+ R+A I +V+
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Query: 455 -----------------GLTPNVVTYTILVDGLCKRG 474
GL P+VVTYT LVDGL + G
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 133/272 (48%), Gaps = 35/272 (12%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+ + + + G+S + +SYN+++ LC+ G + A+ LL M PD +++ II
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH--- 349
+ +C+ G+ + + + RKG+ +E +ID +CK G+ +A +L + K
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 350 --------------------------------GVFPDNVVYTTLISGFCKSGNVSAAHKL 377
G+ P V YTTL+ G +SG+++ + ++
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 378 FDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
+ MK +P+ YT +++GLC+ G++ EA KL S M G+ P+ VTYT ++ G+
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 438 AGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
G++ A MV++G N Y+ L+ G
Sbjct: 664 NGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 119/226 (52%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N ++N ++ LC++GK +A +LL +M G PD+VSY V+I G C+ G + KL+
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+ + P+ + II+ CK G+ A L M + G+ D V TTLI G CK
Sbjct: 465 SSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV 524
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G A + + + + +I+ S +L L K K+ E + ++ +GL P VTY
Sbjct: 525 GKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTY 584
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
T L+ G ++G++ +F I M G PNV YTI+++GLC+ G
Sbjct: 585 TTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM- 381
Y I++ LCKNG AE + ++ K G D+ + T+L+ GFC+ N+ A K+FD M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K+ P+ VSY+ ++HGLC++G++ EA L +M G +P TYT LI C G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+AF++ ++M+ +G PNV TYT+L+DGLC+ G
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 125/239 (52%), Gaps = 2/239 (0%)
Query: 238 FREYPEV-GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
F E EV G N Y+ +L SL +L A+ +ME G V ++ Y I++ C
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH-GVFPDN 355
+ G E M ++ + G + ++ +++ C+ + +A +V M+K P++
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
V Y+ LI G C+ G + A L D+M +K P +YT ++ LC G + +A LF E
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
M+ G +P+ TYT LI G C+ G++ EA + +MV+ + P+V+TY L++G CK G
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDG 385
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 123/261 (47%), Gaps = 19/261 (7%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K + + + ++G+ + ++Y ++ L + G + + +L M+ G +P+V Y +I
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I+G CQ G++E+ KL+ +Q G+ PN Y ++ NG++ A +R M + G
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Query: 352 FPDNVVYTTLISGFCKS--GNVSAAHKLFDEMKQKKIVP----DFVSYTSMLHG------ 399
++ +Y++L+ GF S G ++ ++ ++ P + +S L G
Sbjct: 683 ELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLC 742
Query: 400 ------LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
LCK G+ E++ L +L G+ E ++ +C + + + +++
Sbjct: 743 IFLVTRLCKEGRTDESNDLVQNVLERGVFL-EKAMDIIMESYCSKKKHTKCMELITLVLK 801
Query: 454 KGLTPNVVTYTILVDGLCKRG 474
G P+ ++ +++ GL K G
Sbjct: 802 SGFVPSFKSFCLVIQGLKKEG 822
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 144/241 (59%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + R+ E + + + Y+I++ LC+ G + A NL +ME G D+++Y +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C G+ + KL+ ++ ++ + PN ++ +ID K G++ EA+++L+EM + G+ P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + Y +LI GFCK + A ++ D M K PD +++ +++G CK ++ + +LF
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM + G+ + VTY L+ G C++G++ A + +MV + + P++V+Y IL+DGLC
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 474 G 474
G
Sbjct: 487 G 487
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 135/258 (52%), Gaps = 3/258 (1%)
Query: 218 NLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
N + LC N GK A+ + E G N ++Y VL+ +C+ G+ A LL +M
Sbjct: 197 NTLVNGLCLN--GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
E D V Y +II G C+ G L+ L E++ KG + + YN +I C G
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
+ ++LR+M K + P+ V ++ LI F K G + A +L EM Q+ I P+ ++Y S+
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
+ G CK ++ EA ++ M+ G +PD +T+ LI G+CKA + + + +M +G+
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 457 TPNVVTYTILVDGLCKRG 474
N VTY LV G C+ G
Sbjct: 435 IANTVTYNTLVQGFCQSG 452
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 136/230 (59%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
++G +T+ +N +L+ LC +V EA L+ +M G+ P +++ +++G C G++
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ L++ + G +PNE Y +++++CK+G+ A +LR+M + + D V Y+ +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
G CK G++ A LF+EM+ K D ++Y +++ G C G+ + KL +M+ +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
P+ VT++ LI K G++REA + +M+Q+G+ PN +TY L+DG CK
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 143/256 (55%), Gaps = 3/256 (1%)
Query: 218 NLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
N L LC E + A+ + E+G ++ N +++ LC GKV +A L+ +M
Sbjct: 162 NTLLNGLC--LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
G P+ V+YG +++ C+ GQ ++L+ +++ + ++ + Y+ IID LCK+G +
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
A + EM G D + Y TLI GFC +G KL +M ++KI P+ V+++ +
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
+ K GK+ EA +L EM+ G+ P+ +TY +LI G CK + EA + + M+ KG
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 457 TPNVVTYTILVDGLCK 472
P+++T+ IL++G CK
Sbjct: 400 DPDIMTFNILINGYCK 415
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 140/238 (58%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
++ R+ + +S N +++++++ S + GK++EA LL +M G P+ ++Y +I G+
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
C+ +LE+ +++++ + KG P+ +N +I+ CK + + + REM+ GV +
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
V Y TL+ GFC+SG + A KLF EM +++ PD VSY +L GLC G++ +A ++F +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ +E D Y +I+G C A ++ +A+ + + KG+ + Y I++ LC++
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 133/236 (56%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
++ G++ + + +I+++ C+ K+ A + + ++ G PD V + +++G C
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE 171
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
++ + L+L++ + G +P N +++ LC NG+V +A ++ M + G P+ V Y
Sbjct: 172 CRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
+++ CKSG + A +L +M+++ I D V Y+ ++ GLCK G + A LF+EM +
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G + D +TY LI G C AG + + M+++ ++PNVVT+++L+D K G
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 139/240 (57%), Gaps = 1/240 (0%)
Query: 229 EGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK R A ++ +E + G++ NT++YN ++ C+ +++EA ++ M G PD+++
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
+ ++I+GYC+ +++ L+L E+ +G+ N YN ++ C++G++ A+++ +EM
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
V PD V Y L+ G C +G + A ++F ++++ K+ D Y ++HG+C K+
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+A LF + + G++ D Y +I C+ + +A + +M ++G P+ +TY IL+
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ AI++ G + M++NI+++ C+ ++ + L +M G + + V+Y +
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G+CQ G+LE KL +E+ + +RP+ Y ++D LC NGE+ +A + ++ K +
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
D +Y +I G C + V A LF + K + D +Y M+ LC+ + +A
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
LF +M G PDE+TY LI H + A + +M G +V T ++++ L
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 122/241 (50%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +FR+ + + +N + ++ + + + L QME G + + ++I+
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+C+ +L M ++ + G P+ ++N +++ LC V EA ++ M + G P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ TL++G C +G VS A L D M + P+ V+Y +L+ +CK G+ A +L
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+M ++ D V Y+ +I G CK G + AF++ N+M KG +++TY L+ G C
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 474 G 474
G
Sbjct: 312 G 312
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 114/210 (54%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K +A +L M +P V+ + + S + Q E VL L ++++ KG+ + Y +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I+ C+ ++ A + ++ K G PD V++ TL++G C VS A +L D M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
P ++ ++++GLC GK+ +A L M+ G +P+EVTY ++ CK+G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +M ++ + + V Y+I++DGLCK G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 138/230 (60%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G ++N ++NI+L LC+ + +A +LL +M +PDV SY +I G+C+ +LEK
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
L+L E++ G + + +ID CK G++ EA L+EM G+ D VVYT+LI G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
FC G + LFDE+ ++ P ++Y +++ G CK+G++ EA ++F M+ G+ P+
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TYT LI G C G+ +EA + N M++K PN VTY I+++ LCK G
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 150/270 (55%), Gaps = 1/270 (0%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
+L G +V + N+ L LC N E K A+ + RE + + SYN V+ C+
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGK-AVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
++++A L +M+ G +V++G++I +C+ G++++ + ++E++ GL + VY
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
++I C GE+ + + E+ + G P + Y TLI GFCK G + A ++F+ M ++
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
+ P+ +YT ++ GLC +GK EA +L + M+ EP+ VTY +I CK G + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I M ++ P+ +TY IL+ GLC +G
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 4/251 (1%)
Query: 226 GNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
G EGK+ +A+ + E G SW+ +++ I++ + C+ GK+ EA L +M+F G
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
D+V Y +I G+C G+L++ L +E+ +G P YN +I CK G++ EA +
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
M + GV P+ YT LI G C G A +L + M +K P+ V+Y +++ LCK
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG--LTPNVV 461
G + +A ++ M PD +TY L+ G C G++ EA + M++ P+V+
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425
Query: 462 TYTILVDGLCK 472
+Y L+ GLCK
Sbjct: 426 SYNALIHGLCK 436
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 124/241 (51%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +R+ E N +S + +L Q+ K A +L M G +V ++ +++
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ + K + L+ E++R L P+ + YN +I C+ E+ +A + EM G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
V + LI FCK+G + A EMK + D V YTS++ G C G++ LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
E+L G P +TY LI G CK G+++EA I M+++G+ PNV TYT L+DGLC
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 474 G 474
G
Sbjct: 331 G 331
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLL--MQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK 306
+ ++YNI+L LC G + EA LL M + PDV+SY +I G C+ +L + L
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
+ + L K + N +++ K G+V +A + ++++ + ++ YT +I GFC
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
K+G ++ A L +M+ ++ P Y +L LCK G + +A +LF EM PD V
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ +I G KAG+++ A S+ M + GL+P++ TY+ L++ K G
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 121/239 (50%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+ ++ E + + ++ NI+L+S + G V +A L Q+ V + +Y +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
G+C+ G L L+ +++ L+P+ + YN ++ LCK G + +A R+ EM + F
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD V + +I G K+G++ +A L M + + PD +Y+ +++ K+G + EA
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
F +M+ G EPD +++ GE + + ++V K + + ++D +C
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 218 NLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
N L+ LC EG +A R+F E + +S+NI++ + G +K A +LL+ M
Sbjct: 533 NCLLSSLCK--EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
G PD+ +Y +I+ + ++G L++ + +++ G P+ ++ ++++ GE
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCK-SGNVSAAHKLF 378
+ +++++ + D + T++ C S N+ A +L
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 151/270 (55%), Gaps = 10/270 (3%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
L++YG V++ LC E A+ + + + + + + Y+ V+ SLC+
Sbjct: 205 LVTYGAVIN---------GLCKRGE-PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
V +A NL +M+ G PDV +Y +IS C G+ +L+ ++ + + PN +N
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
++ID K G+++EAE++ EM + + P+ V Y +LI+GFC + A ++F M K
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
+PD V+Y ++++G CK K+V+ +LF +M GL + VTYT LI+G +A + A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ QMV G+ PN++TY L+DGLCK G
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 151/270 (55%), Gaps = 3/270 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLC-GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
K++ G S+ + N L C GN A+ + + E+G +T+++ ++H L Q
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGN--RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
K EA L+ +M G PD+V+YG +I+G C+ G+ + L L+ ++++ + + +
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y+ +ID LCK V +A + EM G+ PD Y++LIS C G S A +L +M
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
++KI P+ V++ S++ K GK++EA KLF EM+ ++P+ VTY +LI G C +
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EA I MV K P+VVTY L++G CK
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 138/253 (54%), Gaps = 2/253 (0%)
Query: 220 FLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
F T + G F+ K A+ + G + ++Y V++ LC+ G+ A NLL +ME
Sbjct: 173 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 232
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
DVV Y +I C+ ++ L L E+ KG+RP+ + Y+++I LC G
Sbjct: 233 KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 292
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
+A R+L +M + + P+ V + +LI F K G + A KLFDEM Q+ I P+ V+Y S++
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
+G C ++ EA ++F+ M+ PD VTY LI G CKA ++ + + M ++GL
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 458 PNVVTYTILVDGL 470
N VTYT L+ G
Sbjct: 413 GNTVTYTTLIHGF 425
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 134/238 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + ++G + ++ N +L+ C ++ EA L+ QM G PD V++ ++
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G Q + + + L+E + KG +P+ Y +I+ LCK GE A +L +M K +
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V+Y+T+I CK +V A LF EM K I PD +Y+S++ LC G+ +A +L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
S+ML + P+ VT+ +LI K G++ EA + ++M+Q+ + PN+VTY L++G C
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 151/273 (55%), Gaps = 1/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + GI V + + ++ LC N+ A R+ + E ++ N +++N ++ +
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLC-NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK+ EA L +M P++V+Y +I+G+C +L++ ++ + K P+
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I+ CK +VV+ + R+M++ G+ + V YTTLI GF ++ + A +F +M
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ P+ ++Y ++L GLCK GK+ +A +F + +EPD TY + G CKAG++
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + + + KG+ P+V+ Y ++ G CK+G
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG 534
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 131/240 (54%), Gaps = 1/240 (0%)
Query: 229 EGKK-RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A ++F E + + N ++YN +++ C ++ EA + M +PDVV+
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I+G+C+ ++ ++L ++ R+GL N Y +I + + A+ V ++M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
GV P+ + Y TL+ G CK+G + A +F+ +++ K+ PD +Y M G+CK GK+
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+ LF + + G++PD + Y +I G CK G EA+++ +M + G P+ TY L+
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 132/238 (55%), Gaps = 1/238 (0%)
Query: 238 FREYPEV-GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
F E E+ GVS N +YNI+++ LC+ ++ A +L +M G P +V+ +++G+C
Sbjct: 87 FGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC 146
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
++ + + L++++ G +P+ + ++ L ++ + EA ++ M G PD V
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
Y +I+G CK G A L ++M++ KI D V Y++++ LCK + +A LF+EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G+ PD TY++LI C G +A + + M+++ + PNVVT+ L+D K G
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 127/228 (55%), Gaps = 1/228 (0%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+S++ + ++L L K+ EA +L +M P +V + ++S ++ + + V
Sbjct: 26 GLSYDGYREKLSRNALLHL-KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLV 84
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+ E+++ G+ N Y YN +I+ LC+ ++ A +L +M K G P V +L++G
Sbjct: 85 ISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNG 144
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
FC +S A L D+M + PD V++T+++HGL + K EA L M+V G +PD
Sbjct: 145 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 204
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
VTY A+I G CK GE A ++ N+M + + +VV Y+ ++D LCK
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 1/212 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
+ +FR+ G+ NT++Y ++H Q A + QM G P++++Y ++
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G+LEK + + E LQ+ + P+ Y YN + + +CK G+V + + ++ GV P
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D + Y T+ISGFCK G A+ LF +MK+ +PD +Y +++ + G + +L
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
EM D TY L+ G + + F
Sbjct: 579 KEMRSCRFAGDASTY-GLVTDMLHDGRLDKGF 609
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 125/242 (51%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A+ +F E + + + ++ +L ++ ++ K + +ME G ++ +Y ++I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+ C+ QL L ++ ++ + G P+ N++++ C + EA ++ +M + G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD V +TTL+ G + S A L + M K PD V+Y ++++GLCK G+ A L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
++M +E D V Y+ +I CK + +A ++ +M KG+ P+V TY+ L+ LC
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 473 RG 474
G
Sbjct: 288 YG 289
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 80/146 (54%), Gaps = 3/146 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSL 260
F +++S G+ ++ + N L LC N GK ++A+ VF + + + +YNI+ +
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKN--GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
C+ GKV++ +L + G PDV++Y +ISG+C+ G E+ L +++ G P+
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREM 346
YN +I ++G+ + +++EM
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEM 581
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 139/244 (56%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
K +F + GVS ++N +L LC+ G VKE LL ++ G +P++ +Y +
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
I G CQ G+L+ ++++ L +G +P+ YNN+I LCKN + EAE L +M G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ PD+ Y TLI+G+CK G V A ++ + VPD +Y S++ GLC G+ A
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
LF+E L G++P+ + Y LI G G + EA + N+M +KGL P V T+ ILV+GL
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 471 CKRG 474
CK G
Sbjct: 437 CKMG 440
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 151/273 (55%), Gaps = 5/273 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
K++ G++ ++ + NLF+ LC G +G A+R+ E G + ++YN +++
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDG---AVRMVGCLIEQGPKPDVITYNNLIYG 295
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
LC+ K +EA L +M G PD +Y +I+GYC+ G ++ +++ + G P+
Sbjct: 296 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 355
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
++ Y ++ID LC GE A + E G+ P+ ++Y TLI G G + A +L +
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
EM +K ++P+ ++ +++GLCK+G + +A L M+ G PD T+ LI+G+
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+M A I + M+ G+ P+V TY L++GLCK
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 140/268 (52%), Gaps = 1/268 (0%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
L+ G V + N + LC N + ++ + + + E G+ ++ +YN ++ C+ G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGG 335
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
V+ A ++ F G VPD +Y +I G C G+ + L L E KG++PN +YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I L G ++EA ++ EM++ G+ P+ + L++G CK G VS A L M K
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD ++ ++HG KM A ++ ML G++PD TY +L+ G CK + +
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ MV+KG PN+ T+ IL++ LC+
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCR 543
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 125/278 (44%), Gaps = 35/278 (12%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+ VF SYN ++ L G +AH + M+M G PDV S+ +
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY---------------------------- 323
+ +C+ + L+L+ + +G N Y
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 324 -------NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
N ++ +LCK G+V E E++L ++ K GV P+ Y I G C+ G + A +
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+ + ++ PD ++Y ++++GLCK K EA +M+ GLEPD TY LI G+C
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
K G ++ A I V G P+ TY L+DGLC G
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 35/277 (12%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A +V+ + G++ + S+ I + S C+ + A LL M G +VV+Y ++
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVV 188
Query: 293 SGY-----------------------------------CQIGQLEKVLKLMEELQRKGLR 317
G+ C+ G +++ KL++++ ++G+
Sbjct: 189 GGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL 248
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
PN + YN I LC+ GE+ A R++ + + G PD + Y LI G CK+ A
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 378 FDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
+M + + PD +Y +++ G CK G + A ++ + + G PD+ TY +LI G C
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 438 AGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
GE A ++ N+ + KG+ PNV+ Y L+ GL +G
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 127/243 (52%), Gaps = 1/243 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A ++ E E G+ ++NI+++ LC++G V +A L+ M G PD+ ++ ++I
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
GY ++E L++++ + G+ P+ Y YN++++ LCK + + + M + G
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+ + L+ C+ + A L +EMK K + PD V++ +++ G CK G + A+ L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 413 FSEML-VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
F +M + TY +I+ + + A + +MV + L P+ TY ++VDG C
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 472 KRG 474
K G
Sbjct: 649 KTG 651
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 140/269 (52%), Gaps = 12/269 (4%)
Query: 209 GIVVSVDSCNLFLTRLC-----GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
G++ V + N+ + LC + +G + + +P++ ++NI++H
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI------FTFNILIHGYSTQ 474
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
K++ A +L M G PDV +Y +++G C+ + E V++ + + KG PN + +
Sbjct: 475 LKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTF 534
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
N +++ LC+ ++ EA +L EM V PD V + TLI GFCK+G++ A+ LF +M++
Sbjct: 535 NILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Query: 384 K-KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K+ +Y ++H + + A KLF EM+ L PD TY ++ G CK G +
Sbjct: 595 AYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVN 654
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+ +M++ G P++ T +++ LC
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLC 683
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 119/238 (50%), Gaps = 1/238 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+ + + GV + +YN +L+ LC+ K ++ M G P++ ++ ++
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK-HG 350
+ C+ +L++ L L+EE++ K + P+ + +ID CKNG++ A + R+M + +
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
V Y +I F + NV+ A KLF EM + + PD +Y M+ G CK G + +
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
K EM+ G P T +I C + EA I ++MVQKGL P V VD
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVD 715
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 120/247 (48%), Gaps = 2/247 (0%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
G FE + + RE VG Y + + + GKV+EA N+ +M+F P V
Sbjct: 54 GKFEAMEEVLVDMRE--NVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTV 111
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
SY I+S G ++ K+ ++ +G+ P+ Y + + CK A R+L
Sbjct: 112 FSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNN 171
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M+ G + V Y T++ GF + + ++LF +M + ++ +L LCK G
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ E KL +++ G+ P+ TY I G C+ GE+ A + ++++G P+V+TY
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 466 LVDGLCK 472
L+ GLCK
Sbjct: 292 LIYGLCK 298
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 123/246 (50%), Gaps = 6/246 (2%)
Query: 233 RAIRVFREY-PEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+A+ +F EVG +Y V+ L GK + +L+ M NV + + GV
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR--ENVGNHMLEGVY 79
Query: 292 ISG---YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+ Y + G++++ + + E + P + YN I+ +L +G +A +V M
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
G+ PD +T + FCK+ AA +L + M + + V+Y +++ G + E
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
++LF +ML G+ T+ L+ CK G+++E + ++++++G+ PN+ TY + +
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259
Query: 469 GLCKRG 474
GLC+RG
Sbjct: 260 GLCQRG 265
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 158/289 (54%), Gaps = 1/289 (0%)
Query: 181 VFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFRE 240
++ V FQ ++ S GI +V +++ LC + + A ++F
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD-NKMEEAEKMFEL 259
Query: 241 YPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQ 300
+ GV N +Y+ ++ C+ G V++A+ L ++ +P+VV +G ++ G+C+ +
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 301 LEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTT 360
L L + + G+ PN YVYN +I CK+G ++EA +L EM + PD YT
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 361 LISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMG 420
LI+G C V+ A++LF +MK ++I P +Y S++HG CK M +A L SEM G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 421 LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+EP+ +T++ LI G+C +++ A ++ +M KG+ P+VVTYT L+D
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 133/236 (56%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
++ E +G+ N Y I + LC+ K++EA + M+ G +P++ +Y +I GY
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
C+ G + + L +E+ L PN V+ ++D CK E+V A + M K GV P+
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
VY LI G CKSGN+ A L EM+ + PD +YT +++GLC ++ EA++LF +
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
M + P TY +LI+G+CK M +A + ++M G+ PN++T++ L+DG C
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 120/192 (62%)
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G VPDV Y V+ + G K KL++E+ G++PN Y+Y I LC++ ++ EA
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
E++ M KHGV P+ Y+ +I G+CK+GNV A+ L+ E+ +++P+ V + +++ G
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
CK ++V A LF M+ G++P+ Y LI+GHCK+G M EA + ++M L+P+
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 460 VVTYTILVDGLC 471
V TYTIL++GLC
Sbjct: 374 VFTYTILINGLC 385
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 135/241 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +F + GV N YN ++H C+ G + EA LL +ME PDV +Y ++I+
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C Q+ + +L ++++ + + P+ YN++I CK + +A + EMT GV P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + ++TLI G+C ++ AA L+ EM K IVPD V+YT+++ K M EA +L+
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
S+ML G+ P++ T+ L+ G K G + A + + Q+ N V +T L++GLC+
Sbjct: 503 SDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQN 562
Query: 474 G 474
G
Sbjct: 563 G 563
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 127/235 (54%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A R+F++ + ++ +YN ++H C+ +++A +L +M G P+++++ +I
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
GYC + ++ + L E+ KG+ P+ Y +ID K + EA R+ +M + G+
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P++ + L+ GF K G +S A + E Q++ + V +T ++ GLC+ G ++ A +
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
FS+M G+ PD +Y +++ GH + + + + M++ G+ PN++ +L
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLA 626
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
+++++ ++G +EA + +M+ C PD + I++G + + + V + +
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREMK-CS--PDSKACLSILNGLVRRRRFDSVWVDYQLMI 191
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+GL P+ ++Y + K G + E++L EMT G+ P+ +YT I C+ +
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME 251
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A K+F+ MK+ ++P+ +Y++M+ G CK G + +A+ L+ E+LV L P+ V + L+
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV 311
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G CKA E+ A S+ MV+ G+ PN+ Y L+ G CK G
Sbjct: 312 DGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSG 353
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 111/223 (49%), Gaps = 1/223 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F K+ + I S + N + C + ++A+ + E GV N ++++ ++ C
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEY-NMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ +K A L +M G VPDVV+Y +I + + +++ L+L ++ G+ PN++
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+ ++D K G + A +E + ++V +T LI G C++G + A + F +M
Sbjct: 516 TFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+ I PD SY SML G + ++ + L +M+ G+ P+
Sbjct: 576 RSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 142/238 (59%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I ++ + +G+ N + NI+L+ C+ ++ A + L +M G+ P +V++G +++G
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
+C+ ++ L + +++ G +PN +YN IID LCK+ +V A +L M K G+ PD
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y +LISG C SG S A ++ M +++I PD ++ +++ K G++ EA + +
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EM+ L+PD VTY+ LIYG C + EA + MV KG P+VVTY+IL++G CK
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 136/241 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +F + +G N + YN ++ LC+ +V A +LL +ME G PDVV+Y +IS
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C G+ +++ + ++ + P+ + +N +ID K G V EAE EM + + P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V Y+ LI G C + A ++F M K PD V+Y+ +++G CK K+ KLF
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM G+ + VTYT LI G+C+AG++ A I +MV G+ PN++TY +L+ GLC
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 474 G 474
G
Sbjct: 410 G 410
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 149/266 (56%), Gaps = 1/266 (0%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
GI ++ +CN+ L C A+ + ++G + +++ +L+ C+ +V +
Sbjct: 111 GIPHNLCTCNILLNCFC-RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYD 169
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
A + QM G P+VV Y II G C+ Q++ L L+ +++ G+ P+ YN++I
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
LC +G +A R++ MTK ++PD + LI K G VS A + ++EM ++ + P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIH 448
D V+Y+ +++GLC ++ EA ++F M+ G PD VTY+ LI G+CK+ ++ +
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 449 NQMVQKGLTPNVVTYTILVDGLCKRG 474
+M Q+G+ N VTYTIL+ G C+ G
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAG 375
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 127/232 (54%), Gaps = 1/232 (0%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EG+ A + E + + ++Y+++++ LC ++ EA + M G PDVV+
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y ++I+GYC+ ++E +KL E+ ++G+ N Y +I C+ G++ AE + R M
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
GV P+ + Y L+ G C +G + A + +M++ + D V+Y ++ G+CK G++
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
+A ++ + GL PD TYT ++ G K G REA ++ +M + G+ PN
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 102/177 (57%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ ++Y+I+++ C+ KV+ L +M G V + V+Y ++I GYC+ G+L ++
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+ G+ PN YN ++ LC NG++ +A +L +M K+G+ D V Y +I G CK+
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
G V+ A ++ + + ++PD +YT+M+ GL K G EA LF +M G+ P+E
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 116/226 (51%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N Y +L + + K+ ++ +L M C +P + + ++S ++ + + V+ L
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
E++Q G+ N N +++ C+ ++ A L +M K G P V + +L++GFC+
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
V A +FD+M P+ V Y +++ GLCK ++ A L + M G+ PD VTY
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+LI G C +G +A + + M ++ + P+V T+ L+D K G
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSL 260
F +++ G+ ++ + N+ L LC N GK ++A+ + + + G+ + ++YNI++ +
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDN--GKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
C+ G+V +A ++ + G +PD+ +Y ++ G + G + L +++ G+ PNE
Sbjct: 442 CKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 142/243 (58%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+ + + + GVS N YN ++ SLC+ K EA L +M G P+ V+Y ++
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I +C+ G+L+ L + E+ GL+ + Y YN++I+ CK G++ AE + EM +
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P V YT+L+ G+C G ++ A +L+ EM K I P ++T++L GL + G + +A K
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
LF+EM ++P+ VTY +I G+C+ G+M +AF +M +KG+ P+ +Y L+ GLC
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 472 KRG 474
G
Sbjct: 589 LTG 591
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 138/240 (57%), Gaps = 2/240 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ E + G+ + YN +++ C+ G + A + +M P VV+Y ++
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
GYC G++ K L+L E+ KG+ P+ Y + ++ L + G + +A ++ EM + V P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V Y +I G+C+ G++S A + EM +K IVPD SY ++HGLC G+ EA K+F
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVF 599
Query: 414 SEMLVMG-LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ L G E +E+ YT L++G C+ G++ EA S+ +MVQ+G+ ++V Y +L+DG K
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 139/256 (54%), Gaps = 3/256 (1%)
Query: 222 TRLCGNF--EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
T L G + +GK +A+R++ E G++ + ++ +L L + G +++A L +M
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
P+ V+Y V+I GYC+ G + K + ++E+ KG+ P+ Y Y +I LC G+ E
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A+ + + K + + YT L+ GFC+ G + A + EM Q+ + D V Y ++
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
G K L EM GL+PD+V YT++I K G+ +EAF I + M+ +G P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 459 NVVTYTILVDGLCKRG 474
N VTYT +++GLCK G
Sbjct: 716 NEVTYTAVINGLCKAG 731
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 214/532 (40%), Gaps = 107/532 (20%)
Query: 48 DYSPRKPSIA-DADLVRHVSTTIKRRRSEPLRRVLKPFESKLNPHHLIWVLINIKNDYVL 106
D + + IA D V V ++ +RS + + +L H+ +LI +D L
Sbjct: 27 DSAQEECRIAEDKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKL 86
Query: 107 VLDFFNWARSRRD-KPSLEALCIVLHIAVASNDLKMAQT-----------------LVFE 148
L FFN+ R S + CI++H V +N A + ++F
Sbjct: 87 GLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFS 146
Query: 149 FWATPRLDVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLL-- 206
+ +L FD + + + + LVF + H L+
Sbjct: 147 CYEKCKLSSSSSFDLLIQHYVRSRRVLDG-VLVFKMMITKVSLLPEVRTLSALLHGLVKF 205
Query: 207 --------------SYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMS 252
S GI V + LC + RA + G N +
Sbjct: 206 RHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLC-ELKDLSRAKEMIAHMEATGCDVNIVP 264
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI-------------- 298
YN+++ LC+ KV EA + + PDVV+Y ++ G C++
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 299 ---------------------GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
G++E+ L L++ + G+ PN +VYN +ID LCK +
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 338 EAERVLREMTKHGVFPDNVVYT-----------------------------------TLI 362
EAE + M K G+ P++V Y+ +LI
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
+G CK G++SAA EM KK+ P V+YTS++ G C GK+ +A +L+ EM G+
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
P T+T L+ G +AG +R+A + N+M + + PN VTY ++++G C+ G
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 137/273 (50%), Gaps = 5/273 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK--KRAIRVFREYPEVGVSWNTMSYNIVLHS 259
+H++ GI S+ + F T L G F + A+++F E E V N ++YN+++
Sbjct: 495 YHEMTGKGIAPSIYT---FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
C+ G + +A L +M G VPD SY +I G C GQ + ++ L + N
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
E Y ++ C+ G++ EA V +EM + GV D V Y LI G K + L
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK 671
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
EM + + PD V YTSM+ K G EA ++ M+ G P+EVTYTA+I G CKAG
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ EA + ++M PN VTY +D L K
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 159/357 (44%), Gaps = 48/357 (13%)
Query: 156 DVHHLFDQFTERLIYTYKDWGAHP--LVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVS 213
D LF++ E W P + ++V + ++ GIV
Sbjct: 525 DAVKLFNEMAE--------WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 214 VDSCNLFLTRLCGNFEGKKRAIRVFREYPEVG-VSWNTMSYNIVLHSLCQLGKVKEAHNL 272
S + LC G+ +VF + G N + Y +LH C+ GK++EA ++
Sbjct: 577 TYSYRPLIHGLC--LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 273 LMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK 332
+M G D+V YGV+I G + + L++E+ +GL+P++ +Y ++ID K
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 333 NGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS 392
G+ EA + M G P+ V YT +I+G CK+G V+ A L +M+ VP+ V+
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 393 Y-----------------------------------TSMLHGLCKIGKMVEAHKLFSEML 417
Y ++ G C+ G++ EA +L + M+
Sbjct: 755 YGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 418 VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G+ PD +TYT +I C+ ++++A + N M +KG+ P+ V Y L+ G C G
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 4/237 (1%)
Query: 226 GNFEGKKRAI--RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
G+ + K R + + +E + G+ + + Y ++ + + G KEA + M G VP
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV- 342
+ V+Y +I+G C+ G + + L ++Q PN+ Y +D+L K GEV + V
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVE 774
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
L G+ + Y LI GFC+ G + A +L M + PD ++YT+M++ LC+
Sbjct: 775 LHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR 834
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
+ +A +L++ M G+ PD V Y LI+G C AGEM +A + N+M+++GL PN
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 106/185 (57%), Gaps = 4/185 (2%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQ--LE 302
G N ++Y V++ LC+ G V EA L +M+ +VP+ V+YG + + G+ ++
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQ 770
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
K ++L + KGL N YN +I C+ G + EA ++ M GV PD + YTT+I
Sbjct: 771 KAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
+ C+ +V A +L++ M +K I PD V+Y +++HG C G+M +A +L +EML GL
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Query: 423 PDEVT 427
P+ T
Sbjct: 890 PNNKT 894
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 67/119 (56%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ NT +YN+++ C+ G+++EA L+ +M G PD ++Y +I+ C+ ++K
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
++L + KG+RP+ YN +I C GE+ +A + EM + G+ P+N T S
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 146/242 (60%), Gaps = 2/242 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
+++VF+E + V N +SYN +++ LC GK+ EA ++ +M G P++++Y +I+
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C+ L++ L + ++ +G P +YN +ID CK G++ + + EM + G+ P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y LI+G C++GN+ AA KLFD++ K + PD V++ ++ G C+ G+ +A L
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM-VQKGLTPNVVTYTILVDGLCK 472
EM MGL+P +TY ++ G+CK G ++ A ++ QM ++ L NV +Y +L+ G +
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 473 RG 474
+G
Sbjct: 554 KG 555
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 192/395 (48%), Gaps = 13/395 (3%)
Query: 86 SKLNPHHLIWVLINIKNDYVLVLDFFNWARSRRD-KPSLEALCIVLH-IAVASNDLKMAQ 143
+ +NP+ L LI+ + D L L +++W D SLE +LH +A A K+
Sbjct: 63 TDINPNELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRS 122
Query: 144 TLVFEFWATPRLDVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFH 203
L VH +F I + + ++ D+ F
Sbjct: 123 FLDGFVRNGSDHQVHSIF-----HAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFK 177
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIR-VFREYPEVGVSWNTMSYNIVLHSLCQ 262
+ YG +S SC + L E + + V++E + N ++N+V+++LC+
Sbjct: 178 RSGYYGYKLSALSCKPLMIALLK--ENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCK 235
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK---LMEELQRKGLRPN 319
GK+ +A +++ M+ G P+VVSY +I GYC++G K+ K +++E+ + PN
Sbjct: 236 TGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPN 295
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
+N +ID K+ + + +V +EM V P+ + Y +LI+G C G +S A + D
Sbjct: 296 LTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRD 355
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
+M + P+ ++Y ++++G CK + EA +F + G P Y LI +CK G
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ + F++ +M ++G+ P+V TY L+ GLC+ G
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F +L S G+ V + ++ + C E +K A+ + +E ++G+ ++YNIV+ C
Sbjct: 459 FDQLTSKGLPDLV-TFHILMEGYCRKGESRKAAM-LLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 262 QLGKVKEAHNLLMQMEFCGNVP-DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+ G +K A N+ QME + +V SY V++ GY Q G+LE L+ E+ KGL PN
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
Y E V EM G PD
Sbjct: 577 ITY----------------EIVKEEMVDQGFVPD 594
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 134/228 (58%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+S + S+ I++H C+ ++ A ++L +M G P +V++G ++ G+C + ++
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
L+ + + G PN VYN +ID LCKNGE+ A +L EM K G+ D V Y TL++G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
C SG S A ++ +M ++ I PD V++T+++ K G + EA +L+ EM+ ++P+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
VTY ++I G C G + +A + M KG PNVVTY L+ G CK
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 130/230 (56%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G N + YN ++ LC+ G++ A LL +ME G DVV+Y +++G C G+
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+++ ++ ++ + P+ + +ID+ K G + EA+ + +EM + V P+NV Y ++I+G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
C G + A K FD M K P+ V+Y +++ G CK + E KLF M G D
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY LI+G+C+ G++R A I MV + +TP+++T+ IL+ GLC G
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 137/241 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V + ++G + +++ +LH C + ++ +A +L++ M G P+VV Y +I
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G+L L+L+ E+++KGL + YN ++ LC +G +A R+LR+M K + P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V +T LI F K GN+ A +L+ EM Q + P+ V+Y S+++GLC G++ +A K F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
M G P+ VTY LI G CK + E + +M +G ++ TY L+ G C+
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 474 G 474
G
Sbjct: 365 G 365
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 1/255 (0%)
Query: 218 NLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
N + LC N E A+ + E + G+ + ++YN +L LC G+ +A +L M
Sbjct: 180 NTLIDGLCKNGE-LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
PDVV++ +I + + G L++ +L +E+ + + PN YN+II+ LC +G +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
+A++ M G FP+ V Y TLISGFCK V KLF M + D +Y +++
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
HG C++GK+ A +F M+ + PD +T+ L++G C GE+ A + M +
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 458 PNVVTYTILVDGLCK 472
+V Y I++ GLCK
Sbjct: 419 IGIVAYNIMIHGLCK 433
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 128/231 (55%), Gaps = 3/231 (1%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
GN + A +++E + V N ++YN +++ LC G++ +A M G P+V
Sbjct: 260 GNLD---EAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
V+Y +ISG+C+ +++ +KL + + +G + + YN +I C+ G++ A +
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M V PD + + L+ G C +G + +A FD+M++ + V+Y M+HGLCK K
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
+ +A +LF + V G++PD TYT +I G CK G REA + +M ++G+
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 11/248 (4%)
Query: 227 NFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVV 286
N G A R F +Y E + LHS+ + ++A L +M +P +V
Sbjct: 24 NLLGGGAAARAFSDYREKLRTG-------FLHSI----RFEDAFALFFEMVHSQPLPSIV 72
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+ +++ + + E V+ ++++ G+ + Y + +I C+ + A VL +M
Sbjct: 73 DFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKM 132
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
K G P V + +L+ GFC + A L M + P+ V Y +++ GLCK G++
Sbjct: 133 MKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGEL 192
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
A +L +EM GL D VTY L+ G C +G +A + M+++ + P+VVT+T L
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 467 VDGLCKRG 474
+D K+G
Sbjct: 253 IDVFVKQG 260
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 1/186 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F + S G +V + N ++ C F +++F+ G + + +YN ++H C
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFC-KFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
Q+GK++ A ++ M PD++++ +++ G C G++E L ++++
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I LCK +V +A + + GV PD YT +I G CK+G A +L M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Query: 382 KQKKIV 387
K++ I+
Sbjct: 483 KEEGII 488
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 146/270 (54%), Gaps = 10/270 (3%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
L++YG+VV+ C T L N K A ++ + + +N ++ SLC+
Sbjct: 225 LVTYGVVVN-GLCKRGDTDLALNLLNKMEAAKI---------EADVVIFNTIIDSLCKYR 274
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
V +A NL +ME G P+VV+Y +IS C G+ +L+ ++ K + PN +N
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+ID K G+ VEAE++ +M K + PD Y +L++GFC + A ++F+ M K
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD V+Y +++ G CK ++ + +LF EM GL D VTYT LI G G+ A
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ QMV G+ P+++TY+IL+DGLC G
Sbjct: 455 QKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 149/271 (54%), Gaps = 5/271 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
K++ G S+ + + L C GK+ A+ + + E+G +T+++ ++H L
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYC---HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
K EA L+ +M G P++V+YGV+++G C+ G + L L+ +++ + +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
++N IID LCK V +A + +EM G+ P+ V Y++LIS C G S A +L +M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+KKI P+ V++ +++ K GK VEA KL+ +M+ ++PD TY +L+ G C +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+A + MV K P+VVTY L+ G CK
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 146/272 (53%), Gaps = 1/272 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + GI +V + + ++ LC ++ A ++ + E ++ N +++N ++ +
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK EA L M PD+ +Y +++G+C +L+K ++ E + K P+
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I CK+ V + + REM+ G+ D V YTTLI G G+ A K+F +M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ PD ++Y+ +L GLC GK+ +A ++F M ++ D YT +I G CKAG++
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ + + + KG+ PNVVTY ++ GLC +
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 132/240 (55%), Gaps = 1/240 (0%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A +++ + + + + +YN +++ C ++ +A + M PDVV+
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I G+C+ ++E +L E+ +GL + Y +I L +G+ A++V ++M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
GV PD + Y+ L+ G C +G + A ++FD M++ +I D YT+M+ G+CK GK+
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+ LF + + G++P+ VTY +I G C ++EA+++ +M + G PN TY L+
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 132/238 (55%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + ++G + ++ + +L+ C ++ +A L+ QM G PD +++ +I
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G + + + L++ + ++G +PN Y +++ LCK G+ A +L +M +
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V++ T+I CK +V A LF EM+ K I P+ V+Y+S++ LC G+ +A +L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
S+M+ + P+ VT+ ALI K G+ EA +++ M+++ + P++ TY LV+G C
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 121/223 (54%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
+YNI+++ C+ ++ A LL +M G P +V+ +++GYC ++ + L++++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
G RP+ + +I L + + EA ++ M + G P+ V Y +++G CK G+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A L ++M+ KI D V + +++ LCK + +A LF EM G+ P+ VTY++L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I C G +A + + M++K + PN+VT+ L+D K G
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 104/203 (51%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ ++YN ++ C+ +V++ L +M G V D V+Y +I G G + K+
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+++ G+ P+ Y+ ++D LC NG++ +A V M K + D +YTT+I G CK+
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G V LF + K + P+ V+Y +M+ GLC + EA+ L +M G P+ TY
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 429 TALIYGHCKAGEMREAFSIHNQM 451
LI H + G+ + + +M
Sbjct: 579 NTLIRAHLRDGDKAASAELIREM 601
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 111/208 (53%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K+ +A L M +P +V + ++S ++ + + V+ L E++QR + Y YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I+ C+ ++ A +L +M K G P V ++L++G+C +S A L D+M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD +++T+++HGL K EA L M+ G +P+ VTY ++ G CK G+ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCK 472
++ N+M + +VV + ++D LCK
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 117/224 (52%)
Query: 251 MSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEE 310
+ +N +L ++ ++ K +L +M+ V + +Y ++I+ +C+ Q+ L L+ +
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 145
Query: 311 LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
+ + G P+ +++++ C + +A ++ +M + G PD + +TTLI G
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTA 430
S A L D M Q+ P+ V+Y +++GLCK G A L ++M +E D V +
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+I CK + +A ++ +M KG+ PNVVTY+ L+ LC G
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 97/183 (53%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
+FRE G+ +T++Y ++ L G A + QM G PD+++Y +++
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C G+LEK L++ + +Q+ ++ + Y+Y +I+ +CK G+V + + ++ GV P
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V Y T+ISG C + A+ L +MK+ +P+ +Y +++ + G + +L
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Query: 414 SEM 416
EM
Sbjct: 599 REM 601
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +VF++ GV + M+Y+I+L LC GK+++A + M+ D+ Y +I
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G+++ L L KG++PN YN +I LC + EA +L++M + G P
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS---YTSMLH 398
++ Y TLI + G+ +A+ +L EM+ + V D + +MLH
Sbjct: 574 NSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 621
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 10/211 (4%)
Query: 138 DLKMAQTLVFEFWATPRL-DVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXX 196
D+ TL+ F + R+ D LF + + R + + + Q
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV------GDTVTYTTLIQGLFHDGDCD 452
Query: 197 XXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNI 255
F +++S G+ + + ++ L LC N GK ++A+ VF + + + Y
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNN--GKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
++ +C+ GKV + +L + G P+VV+Y +ISG C L++ L+++++ G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
PN YN +I ++G+ + ++REM
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 142/241 (58%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + E+G + ++YN ++ SLC+ +V +A + ++E G P+VV+Y +++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C + +L+ ++ +K + PN Y+ ++D KNG+V+EA+ + EM + + P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V Y++LI+G C + A+++FD M K + D VSY ++++G CK ++ + KLF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM GL + VTY LI G +AG++ +A +QM G++P++ TY IL+ GLC
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 474 G 474
G
Sbjct: 414 G 414
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 143/238 (60%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I + ++ +G+ + ++NIV++ C +V A ++L +M G PD V+ G +++G
Sbjct: 105 ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG 164
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
+C+ ++ + L++++ G +P+ YN IID LCK V +A +E+ + G+ P+
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V YT L++G C S S A +L +M +KKI P+ ++Y+++L K GK++EA +LF
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EM+ M ++PD VTY++LI G C + EA + + MV KG +VV+Y L++G CK
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 137/241 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + ++G + ++ +++ C+ +V +A +L+ +M G PD+V+Y II
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C+ ++ +E++RKG+RPN Y +++ LC + +A R+L +M K + P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + Y+ L+ F K+G V A +LF+EM + I PD V+Y+S+++GLC ++ EA+++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
M+ G D V+Y LI G CKA + + + +M Q+GL N VTY L+ G +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 474 G 474
G
Sbjct: 379 G 379
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 139/241 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A R+ + + ++ N ++Y+ +L + + GKV EA L +M PD+V+Y +I+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C ++++ ++ + + KG + YN +I+ CK V + ++ REM++ G+
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V Y TLI GF ++G+V A + F +M I PD +Y +L GLC G++ +A +F
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+M ++ D VTYT +I G CK G++ EA+S+ + KGL P++VTYT ++ GLC +
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 474 G 474
G
Sbjct: 484 G 484
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 137/236 (58%), Gaps = 3/236 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +F E + + + ++Y+ +++ LC ++ EA+ + M G + DVVSY +I+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C+ ++E +KL E+ ++GL N YN +I + G+V +A+ +M G+ P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y L+ G C +G + A +F++M+++++ D V+YT+++ G+CK GK+ EA LF
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ + GL+PD VTYT ++ G C G + E +++ +M Q+GL N T L DG
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT---LSDG 511
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 132/233 (56%), Gaps = 6/233 (2%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R +P + + +N +L ++ +L K +L +ME G D+ ++ ++I+ +C
Sbjct: 80 RPFPSI------VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCC 133
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
Q+ L ++ ++ + G P+ ++++ C+ V +A ++ +M + G PD V Y
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
+I CK+ V+ A F E+++K I P+ V+YT++++GLC + +A +L S+M+
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+ P+ +TY+AL+ K G++ EA + +MV+ + P++VTY+ L++GLC
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 118/210 (56%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K+ +A +L M P +V + ++S ++ + + V+ L ++++ G+R + Y +N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I+ C +V A +L +M K G PD V +L++GFC+ VS A L D+M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD V+Y +++ LCK ++ +A F E+ G+ P+ VTYTAL+ G C + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + M++K +TPNV+TY+ L+D K G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNG 274
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
Query: 143 QTLVFEFWATPRL-DVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXX 201
TL+ F R+ D LF + ++R + + + + ++ Q
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVS------NTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ +GI + + N+ L LC N E +K A+ +F + + + + ++Y V+ +C
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEK-ALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GKV+EA +L + G PD+V+Y ++SG C G L +V L +++++GL N
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN-- 504
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSG 369
D +G++ + ++++M G P + + SG CK
Sbjct: 505 ------DCTLSDGDITLSAELIKKMLSCGYAPS--LLKDIKSGVCKKA 544
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 130/230 (56%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G + ++Y +V++ LC+ G A NLL +ME P V+ Y II G C+ ++
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
L L +E++ KG+RPN Y+++I LC G +A R+L +M + + PD ++ LI
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
F K G + A KL+DEM ++ I P V+Y+S+++G C ++ EA ++F M+ PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
VTY LI G CK + E + +M Q+GL N VTY IL+ GL + G
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 133/229 (58%)
Query: 244 VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEK 303
G NT+++N ++H L K EA L+ +M G PD+V+YGV+++G C+ G +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 304 VLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
L+ ++++ L P +YN IID LCK + +A + +EM G+ P+ V Y++LIS
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
C G S A +L +M ++KI PD ++++++ K GK+VEA KL+ EM+ ++P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
VTY++LI G C + EA + MV K P+VVTY L+ G CK
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 149/270 (55%), Gaps = 10/270 (3%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
L++YG+VV+ C T L N K ++ E GV + YN ++ LC+
Sbjct: 221 LVTYGVVVN-GLCKRGDTDLAFNLLNKMEQGKL-----EPGV----LIYNTIIDGLCKYK 270
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
+ +A NL +ME G P+VV+Y +IS C G+ +L+ ++ + + P+ + ++
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 330
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+ID K G++VEAE++ EM K + P V Y++LI+GFC + A ++F+ M K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD V+Y +++ G CK ++ E ++F EM GL + VTY LI G +AG+ A
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I +MV G+ PN++TY L+DGLCK G
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 147/273 (53%), Gaps = 1/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + GI +V + + ++ LC N+ A R+ + E ++ + +++ ++ +
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLC-NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK+ EA L +M P +V+Y +I+G+C +L++ ++ E + K P+
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I CK V E V REM++ G+ + V Y LI G ++G+ A ++F EM
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ P+ ++Y ++L GLCK GK+ +A +F + +EP TY +I G CKAG++
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + + + KG+ P+VV Y ++ G C++G
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 134/247 (54%), Gaps = 1/247 (0%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A +++ E + + + ++Y+ +++ C ++ EA + M PDVV+
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I G+C+ ++E+ +++ E+ ++GL N YN +I L + G+ A+ + +EM
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
GV P+ + Y TL+ G CK+G + A +F+ +++ K+ P +Y M+ G+CK GK+
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+ LF + + G++PD V Y +I G C+ G EA ++ +M + G PN Y L+
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 468 DGLCKRG 474
+ G
Sbjct: 579 RARLRDG 585
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 137/238 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V + ++G N ++ + +L+ C ++ EA L+ QM G P+ V++ +I
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G + + + L++ + KG +P+ Y +++ LCK G+ A +L +M + + P
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 254
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
++Y T+I G CK ++ A LF EM+ K I P+ V+Y+S++ LC G+ +A +L
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
S+M+ + PD T++ALI K G++ EA ++++MV++ + P++VTY+ L++G C
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 132/240 (55%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I + + +G+ N +Y+I+++ C+ ++ A +L +M G P++V+ +++G
Sbjct: 101 ISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 160
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
YC ++ + + L++++ G +PN +N +I L + + EA ++ M G PD
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 220
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y +++G CK G+ A L ++M+Q K+ P + Y +++ GLCK M +A LF
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
EM G+ P+ VTY++LI C G +A + + M+++ + P+V T++ L+D K G
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 1/214 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ + VFRE + G+ NT++YNI++ L Q G A + +M G P++++Y +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G C+ G+LEK + + E LQR + P Y YN +I+ +CK G+V + + ++ GV
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD V Y T+ISGFC+ G+ A LF EMK+ +P+ Y +++ + G + +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
L EM G D T L+ G + ++F
Sbjct: 593 LIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 625
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 115/208 (55%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K+ +A L +M P ++ + ++S ++ + + V+ L E++Q G+ N Y Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I+ C+ ++ A VL +M K G P+ V ++L++G+C S +S A L D+M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
P+ V++ +++HGL K EA L M+ G +PD VTY ++ G CK G+ A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCK 472
F++ N+M Q L P V+ Y ++DGLCK
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCK 268
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ ++YN ++ C+ +V+E + +M G V + V+Y ++I G Q G + ++
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+E+ G+ PN YN ++D LCKNG++ +A V + + + P Y +I G CK+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G V LF + K + PD V+Y +M+ G C+ G EA LF EM G P+ Y
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
LI + G+ + + +M G + T ++ + L
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 120/236 (50%), Gaps = 6/236 (2%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R +P + + ++ +L ++ ++ K +L QM+ G + +Y ++I+ +C+
Sbjct: 76 RPFPSI------IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRR 129
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
QL L ++ ++ + G PN +++++ C + + EA ++ +M G P+ V +
Sbjct: 130 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 189
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
TLI G S A L D M K PD V+Y +++GLCK G A L ++M
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
LEP + Y +I G CK M +A ++ +M KG+ PNVVTY+ L+ LC G
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 131/219 (59%), Gaps = 3/219 (1%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
++ C+LGK ++A +L +E G VPDV++Y V+ISGYC+ G++ L + L R
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMS 199
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAH 375
+ P+ YN I+ LC +G++ +A VL M + +PD + YT LI C+ V A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
KL DEM+ + PD V+Y +++G+CK G++ EA K ++M G +P+ +T+ ++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
C G +A + M++KG +P+VVT+ IL++ LC++G
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 145/265 (54%), Gaps = 3/265 (1%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
G V + N+ + +C EG+ AI+ + P G N +++NI+L S+C G+
Sbjct: 269 GCTPDVVTYNVLVNGICK--EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
+A LL M G P VV++ ++I+ C+ G L + + ++E++ + G +PN YN ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
CK ++ A L M G +PD V Y T+++ CK G V A ++ +++ K
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
P ++Y +++ GL K GK +A KL EM L+PD +TY++L+ G + G++ EA
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCK 472
++ + G+ PN VT+ ++ GLCK
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCK 531
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 167/313 (53%), Gaps = 9/313 (2%)
Query: 167 RLIYTYKDWGAHP--LVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRL 224
+L+ +D G P + ++V + + S G +V + N+ L +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 225 CGN---FEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN 281
C + +K + R+ G S + +++NI+++ LC+ G + A ++L +M G
Sbjct: 320 CSTGRWMDAEKLLADMLRK----GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
P+ +SY ++ G+C+ ++++ ++ +E + +G P+ YN ++ LCK+G+V +A
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
+L +++ G P + Y T+I G K+G A KL DEM+ K + PD ++Y+S++ GL
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
+ GK+ EA K F E MG+ P+ VT+ +++ G CK+ + A M+ +G PN
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 462 TYTILVDGLCKRG 474
+YTIL++GL G
Sbjct: 556 SYTILIEGLAYEG 568
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 142/258 (55%), Gaps = 3/258 (1%)
Query: 218 NLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
N L LC + GK K+A+ V + + ++Y I++ + C+ V A LL +M
Sbjct: 208 NTILRSLCDS--GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
G PDVV+Y V+++G C+ G+L++ +K + ++ G +PN +N I+ +C G
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
++AE++L +M + G P V + LI+ C+ G + A + ++M Q P+ +SY +
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
LHG CK KM A + M+ G PD VTY ++ CK G++ +A I NQ+ KG
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 457 TPNVVTYTILVDGLCKRG 474
+P ++TY ++DGL K G
Sbjct: 446 SPVLITYNTVIDGLAKAG 463
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 139/245 (56%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
G A+++ E + G + + ++YN++++ +C+ G++ EA L M G P+V+++
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+I+ C G+ KL+ ++ RKG P+ +N +I+ LC+ G + A +L +M +H
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G P+++ Y L+ GFCK + A + + M + PD V+Y +ML LCK GK+ +A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
++ +++ G P +TY +I G KAG+ +A + ++M K L P+ +TY+ LV G
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 470 LCKRG 474
L + G
Sbjct: 494 LSREG 498
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 257 LHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL 316
L + + G+++E L M + GNVPD++ +I G+C++G+ K K++E L+ G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
P+ YN +I CK GE+ A VL M+ V PD V Y T++ C SG + A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+ D M Q+ PD ++YT ++ C+ + A KL EM G PD VTY L+ G C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
K G + EA N M G PNV+T+ I++ +C G
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 136/253 (53%), Gaps = 3/253 (1%)
Query: 205 LLSYGIVVSVDSCNLFLTRLC-GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
+L G SV + N+ + LC G RAI + + P+ G N++SYN +LH C+
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLG--RAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
K+ A L +M G PD+V+Y +++ C+ G++E ++++ +L KG P Y
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
N +ID L K G+ +A ++L EM + PD + Y++L+ G + G V A K F E ++
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
I P+ V++ S++ GLCK + A M+ G +P+E +YT LI G G +E
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 444 AFSIHNQMVQKGL 456
A + N++ KGL
Sbjct: 573 ALELLNELCNKGL 585
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 137/271 (50%), Gaps = 4/271 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
++ +G V + C + C ++A ++ G + ++YN+++ C
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFC-RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ G++ A ++L +M PDVV+Y I+ C G+L++ +++++ + ++ P+
Sbjct: 184 KAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y +I+ C++ V A ++L EM G PD V Y L++G CK G + A K ++M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
P+ +++ +L +C G+ ++A KL ++ML G P VT+ LI C+ G +
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
A I +M Q G PN ++Y L+ G CK
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 3/149 (2%)
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
NN + + + GE+ E + L M HG PD + TTLI GFC+ G A K+ + ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
VPD ++Y M+ G CK G++ A + M V PD VTY ++ C +G++++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQ 222
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
A + ++M+Q+ P+V+TYTIL++ C+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCR 251
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSL 260
+++S G + + N LT LC +GK + A+ + + G S ++YN V+ L
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCK--DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+ GK +A LL +M PD ++Y ++ G + G++++ +K E +R G+RPN
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
+N+I+ LCK+ + A L M G P+ YT LI G G A +L +E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 381 MKQKKIV 387
+ K ++
Sbjct: 580 LCNKGLM 586
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 358 YTTLISGFCKS---GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
+ TL SG+ S G+ S+ + F + V + L + + G++ E K
Sbjct: 75 FETLSSGYSNSNGNGHYSSVNSSF--------ALEDVESNNHLRQMVRTGELEEGFKFLE 126
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
M+ G PD + T LI G C+ G+ R+A I + G P+V+TY +++ G CK G
Sbjct: 127 NMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG 186
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 139/241 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + R+ E + + + Y+I++ LC+ G + A NL +ME G D++ Y +I
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C G+ + KL+ ++ ++ + P+ ++ +ID K G++ EAE + +EM + G+ P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V YT+LI GFCK + A+ + D M K P+ ++ +++G CK + + +LF
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+M + G+ D VTY LI G C+ G++ A + +MV + + P++V+Y IL+DGLC
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 474 G 474
G
Sbjct: 471 G 471
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 140/230 (60%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
++G +T++++ +++ LC G+V EA L+ +M G+ P +++ +++G C G++
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ L++ + G +PNE Y ++ ++CK+G+ A +LR+M + + D V Y+ +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
G CK G++ A LF+EM+ K D + YT+++ G C G+ + KL +M+ +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
PD V ++ALI K G++REA +H +M+Q+G++P+ VTYT L+DG CK
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 143/246 (58%), Gaps = 1/246 (0%)
Query: 228 FEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVV 286
EG+ A+ + E+G ++ N +++ LC GKV +A L+ +M G P+ V
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+YG ++ C+ GQ ++L+ +++ + ++ + Y+ IID LCK+G + A + EM
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
G D ++YTTLI GFC +G KL +M ++KI PD V++++++ K GK+
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
EA +L EM+ G+ PD VTYT+LI G CK ++ +A + + MV KG PN+ T+ IL
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 467 VDGLCK 472
++G CK
Sbjct: 394 INGYCK 399
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 138/239 (57%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
++ R+ + ++ + ++++ ++ + GK++EA L +M G PD V+Y +I G+
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
C+ QL+K +++ + KG PN +N +I+ CK + + + R+M+ GV D
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
V Y TLI GFC+ G + A +LF EM +++ PD VSY +L GLC G+ +A ++F +
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +E D Y +I+G C A ++ +A+ + + KG+ P+V TY I++ GLCK+G
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 137/240 (57%), Gaps = 1/240 (0%)
Query: 229 EGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK R A + +E + G+S +T++Y ++ C+ ++ +A+++L M G P++ +
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
+ ++I+GYC+ ++ L+L ++ +G+ + YN +I C+ G++ A+ + +EM
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
V PD V Y L+ G C +G A ++F+++++ K+ D Y ++HG+C K+
Sbjct: 450 SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 509
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+A LF + + G++PD TY +I G CK G + EA + +M + G +PN TY IL+
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G N ++NI+++ C+ + + L +M G V D V+Y +I G+C++G+LE
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+L +E+ + +RP+ Y ++D LC NGE +A + ++ K + D +Y +I G
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
C + V A LF + K + PD +Y M+ GLCK G + EA LF +M G P+
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
TY LI H G+ ++ + ++ + G + + T ++VD L
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 123/236 (52%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R + V +SY L S K +A +L +M P ++ + + S +
Sbjct: 26 RVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVART 85
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
Q + VL L ++++ KG+ N Y + +I+ C+ ++ A + ++ K G PD V +
Sbjct: 86 KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTF 145
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
+TLI+G C G VS A +L D M + P ++ ++++GLC GK+ +A L M+
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G +P+EVTY ++ CK+G+ A + +M ++ + + V Y+I++DGLCK G
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%)
Query: 271 NLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLL 330
+L QME G ++ + ++I+ C+ +L M ++ + G P+ ++ +I+ L
Sbjct: 93 DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
Query: 331 CKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDF 390
C G V EA ++ M + G P + L++G C +G VS A L D M + P+
Sbjct: 153 CLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE 212
Query: 391 VSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQ 450
V+Y +L +CK G+ A +L +M ++ D V Y+ +I G CK G + AF++ N+
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 272
Query: 451 MVQKGLTPNVVTYTILVDGLCKRG 474
M KG +++ YT L+ G C G
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAG 296
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 35/185 (18%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
+ +FR+ GV +T++YN ++ C+LGK++ A L +M PD+VSY +++
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 294 GYCQIGQLEKVLKLMEELQR-----------------------------------KGLRP 318
G C G+ EK L++ E++++ KG++P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
+ YN +I LCK G + EA+ + R+M + G P+ Y LI G+ + + KL
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 379 DEMKQ 383
+E+K+
Sbjct: 586 EEIKR 590
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 177 AHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIR 236
A + ++ Q F +++S + + S + L LC N E +K A+
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK-ALE 478
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F + + + + YNI++H +C KV +A +L + G PDV +Y ++I G C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
+ G L + L +++ G PN YN +I G+ ++ +++ E+ + G D
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F K+ + + + N+ + +C N A +F P GV + +YNI++ LC
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMC-NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ G + EA L +ME G+ P+ +Y ++I + G K KL+EE++R G +
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598
Query: 322 VYNNIIDLL 330
++D+L
Sbjct: 599 TVKMVVDML 607
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 144/264 (54%), Gaps = 1/264 (0%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
G+V S N+ L R C N + A E + G+ +YN ++H L K++
Sbjct: 322 GLVPDSVSYNI-LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
A L+ ++ G V D V+Y ++I+GYCQ G +K L +E+ G++P ++ Y ++I
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
+LC+ + EA+ + ++ G+ PD V+ TL+ G C GN+ A L EM I P
Sbjct: 441 VLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINP 500
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIH 448
D V+Y ++ GLC GK EA +L EM G++PD ++Y LI G+ K G+ + AF +
Sbjct: 501 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560
Query: 449 NQMVQKGLTPNVVTYTILVDGLCK 472
++M+ G P ++TY L+ GL K
Sbjct: 561 DEMLSLGFNPTLLTYNALLKGLSK 584
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 134/251 (53%), Gaps = 6/251 (2%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
L G EG + I E G + +YN +L +C G+ E +L +M+ G VP
Sbjct: 272 LRGRIEGARLIIS---EMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVP 325
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
D VSY ++I G G LE +E+ ++G+ P Y YN +I L ++ AE ++
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 385
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
RE+ + G+ D+V Y LI+G+C+ G+ A L DEM I P +YTS+++ LC+
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRK 445
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
K EA +LF +++ G++PD V L+ GHC G M AFS+ +M + P+ VTY
Sbjct: 446 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY 505
Query: 464 TILVDGLCKRG 474
L+ GLC G
Sbjct: 506 NCLMRGLCGEG 516
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 139/268 (51%), Gaps = 4/268 (1%)
Query: 207 SYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV 266
S G + + N L+ +C EG RA V RE E+G+ +++SYNI++ G +
Sbjct: 288 SKGFQPDMQTYNPILSWMCN--EG--RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 267 KEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI 326
+ A +M G VP +Y +I G ++E L+ E++ KG+ + YN +
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 327 IDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKI 386
I+ C++G+ +A + EM G+ P YT+LI C+ A +LF+++ K +
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 387 VPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFS 446
PD V +++ G C IG M A L EM +M + PD+VTY L+ G C G+ EA
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 447 IHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +M ++G+ P+ ++Y L+ G K+G
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKG 551
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 1/244 (0%)
Query: 228 FEGKKRAIRVF-REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVV 286
E K A + RE E G+ ++++YNI+++ CQ G K+A L +M G P
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+Y +I C+ + + +L E++ KG++P+ + N ++D C G + A +L+EM
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
+ PD+V Y L+ G C G A +L EMK++ I PD +SY +++ G K G
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
A + EML +G P +TY AL+ G K E A + +M +G+ PN ++ +
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 467 VDGL 470
++ +
Sbjct: 614 IEAM 617
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 119/224 (53%), Gaps = 1/224 (0%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
GIV+ + N+ + C + + KK A + E G+ +Y +++ LC+ K +E
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKK-AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
A L ++ G PD+V ++ G+C IG +++ L++E+ + P++ YN ++
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
LC G+ EA ++ EM + G+ PD++ Y TLISG+ K G+ A + DEM P
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNP 570
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
++Y ++L GL K + A +L EM G+ P++ ++ ++I
Sbjct: 571 TLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+T+ +++++ CQL V EA M+ G P + I++ ++ ++E
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
++ R ++ N Y +N +I++LCK G++ +A+ L M G+ P V Y TL+ GF
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G + A + EMK K PD +Y +L +C G+ A ++ EM +GL PD V+Y
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSY 330
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
LI G G++ AF+ ++MV++G+ P TY L+ GL
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A +F + G+ + + N ++ C +G + A +LL +M+ PD V+Y +
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G C G+ E+ +LM E++R+G++P+ YN +I K G+ A V EM G
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
P + Y L+ G K+ A +L EMK + IVP+ S+ S++ + +
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%)
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+++ ++ C+ V EA M + G +P +++ + + A + +M
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ +I + ++ M++ LCK GK+ +A M V G++P VTY L+ G G +
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A I ++M KG P++ TY ++ +C G
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEG 309
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
+++ L+ C+ V A + F MK+K P + +L L ++ ++ A +++
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
M M ++ + T+ +I CK G++++A M G+ P +VTY LV G RG
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 161/304 (52%), Gaps = 45/304 (14%)
Query: 209 GIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV 266
G V+ S N + C G F+ A V E G+ T +YNI + +LC G++
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDD---AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 267 KEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI 326
+A LL M PDVVSY ++ GY ++G+ + L ++L+ + P+ YN +
Sbjct: 360 DDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 327 IDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKI 386
ID LC++G + A+R+ EMT +FPD + YTTL+ GF K+GN+S A +++DEM +K I
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Query: 387 VPDFVSYTS------------------------------------MLHGLCKIGKMVEAH 410
PD +YT+ + GLCK+G +V+A
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ ++ +GL PD VTYT +I G+ + G+ + A +++++M++K L P+V+TY +L+ G
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 471 CKRG 474
K G
Sbjct: 596 AKAG 599
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 183/387 (47%), Gaps = 13/387 (3%)
Query: 89 NPHHLIWVLINIKNDYVLVLDFFNWARSRRD-KPSLEALCIVLHIAVASNDLKMAQTLVF 147
+P+ LI VL I+ + FFNW + + D K S +A +L I +A NDL LV
Sbjct: 84 DPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEI-LAENDLMSEAYLVA 142
Query: 148 EFWATPRLDVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLS 207
E + L +H + D LI D + D+ F K++
Sbjct: 143 E--RSIDLGMHEIDDL----LIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIR 196
Query: 208 YGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
G + SV +CN+ L ++ + +A V+ E G+ +++N +L S + G ++
Sbjct: 197 KGFLPSVRNCNIVL-KVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLE 255
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
+ ++M+ V+Y ++I+G+ + G++E+ + +++R G Y +N +I
Sbjct: 256 RVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLI 315
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
+ CK G +A V EM G++P Y I C G + A +L M
Sbjct: 316 EGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----A 371
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
PD VSY +++HG K+GK VEA LF ++ + P VTY LI G C++G + A +
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
+M + + P+V+TYT LV G K G
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNG 458
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 138/257 (53%), Gaps = 36/257 (14%)
Query: 251 MSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEE 310
++YN ++ LC+ G ++ A L +M PDV++Y ++ G+ + G L ++ +E
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 469
Query: 311 LQRKGLRPNEY------------------------------------VYNNIIDLLCKNG 334
+ RKG++P+ Y +YN ID LCK G
Sbjct: 470 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
+V+A R++ + G+ PD+V YTT+I G+ ++G A L+DEM +K++ P ++Y
Sbjct: 530 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 589
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK 454
+++G K G++ +A + +EM G+ P+ +T+ AL+YG CKAG + EA+ +M ++
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 649
Query: 455 GLTPNVVTYTILVDGLC 471
G+ PN +YT+L+ C
Sbjct: 650 GIPPNKYSYTMLISKNC 666
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 148/307 (48%), Gaps = 41/307 (13%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
++L+ GI + + N+++ LC +F G+ I RE + + +SYN ++H ++
Sbjct: 333 EMLNAGIYPTTSTYNIYICALC-DF-GR---IDDARELLSSMAAPDVVSYNTLMHGYIKM 387
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
GK EA L + P +V+Y +I G C+ G LE +L EE+ + + P+ Y
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITY 447
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTL---------------------- 361
++ KNG + A V EM + G+ PD YTT
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 362 --------------ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
I G CK GN+ A + ++ + +VPD V+YT+++ G + G+
Sbjct: 508 TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
A L+ EML L P +TY LIYGH KAG + +AF +M ++G+ PNV+T+ L+
Sbjct: 568 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Query: 468 DGLCKRG 474
G+CK G
Sbjct: 628 YGMCKAG 634
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 102/191 (53%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
YN+ + LC++G + +A ++ G VPD V+Y +I GY + GQ + L +E+
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
RK L P+ Y +I K G + +A + EM K GV P+ + + L+ G CK+GN+
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A++ +M+++ I P+ SYT ++ C K E KL+ EML +EPD T+ AL
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Query: 433 YGHCKAGEMRE 443
K E RE
Sbjct: 698 KHLEKDHESRE 708
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 63/113 (55%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++A + E + GV N M++N +L+ +C+ G + EA+ L +ME G P+ SY ++
Sbjct: 602 EQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
IS C + E+V+KL +E+ K + P+ Y + + L K+ E E E + R
Sbjct: 662 ISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLER 714
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 150/270 (55%), Gaps = 3/270 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLC-GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
K++ G + + N L C GN A+ + + E+G ++ ++N ++H L +
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISD--AVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
+ EA L+ +M G PD+V+YG++++G C+ G ++ L L++++++ + P +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
YN IID LC V +A + EM G+ P+ V Y +LI C G S A +L +M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
++KI P+ V++++++ K GK+VEA KL+ EM+ ++PD TY++LI G C +
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EA + M+ K PNVVTY L+ G CK
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 150/272 (55%), Gaps = 14/272 (5%)
Query: 205 LLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
L++YGIVV+ LC G+ + A+ + ++ + + + YN ++ +LC
Sbjct: 221 LVTYGIVVN---------GLCKRGDID---LALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
V +A NL +M+ G P+VV+Y +I C G+ +L+ ++ + + PN
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
++ +ID K G++VEAE++ EM K + PD Y++LI+GFC + A +F+ M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K P+ V+Y +++ G CK ++ E +LF EM GL + VTYT LI+G +A E
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + QMV G+ P+++TY+IL+DGLC G
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 124/226 (54%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G + ++Y IV++ LC+ G + A +LL +ME P VV Y II C +
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
L L E+ KG+RPN YN++I LC G +A R+L +M + + P+ V ++ LI
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
F K G + A KL+DEM ++ I PD +Y+S+++G C ++ EA +F M+ P+
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
VTY LI G CKA + E + +M Q+GL N VTYT L+ G
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 36/292 (12%)
Query: 218 NLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
N + LC N++ A+ +F E G+ N ++YN ++ LC G+ +A LL M
Sbjct: 260 NTIIDALC-NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
P+VV++ +I + + G+L + KL +E+ ++ + P+ + Y+++I+ C + +
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
EA+ + M FP+ V Y TLI GFCK+ V +LF EM Q+ +V + V+YT+++
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 398 HG-----------------------------------LCKIGKMVEAHKLFSEMLVMGLE 422
HG LC GK+ A +F + +E
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
PD TY +I G CKAG++ + + + + KG+ PNVVTYT ++ G C++G
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 147/269 (54%), Gaps = 10/269 (3%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
H L +Y I++ N F R A+ V + ++G + ++ N +L+ C
Sbjct: 114 HNLYTYSILI-----NCFCRR-----SQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH 163
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
++ +A +L+ QM G PD ++ +I G + + + + L++ + KG +P+
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y +++ LCK G++ A +L++M + + P V+Y T+I C NV+ A LF EM
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K I P+ V+Y S++ LC G+ +A +L S+M+ + P+ VT++ALI K G++
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
EA ++++M+++ + P++ TY+ L++G C
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 131/240 (54%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I + + +G+S N +Y+I+++ C+ ++ A +L +M G PD+V+ +++G
Sbjct: 101 ISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNG 160
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
+C ++ + L+ ++ G +P+ + +N +I L ++ EA ++ M G PD
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y +++G CK G++ A L +M+Q KI P V Y +++ LC + +A LF+
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
EM G+ P+ VTY +LI C G +A + + M+++ + PNVVT++ L+D K G
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 133/240 (55%), Gaps = 1/240 (0%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A +++ E + + + +Y+ +++ C ++ EA ++ M P+VV+
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I G+C+ ++++ ++L E+ ++GL N Y +I + E A+ V ++M
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
GV PD + Y+ L+ G C +G V A +F+ +++ K+ PD +Y M+ G+CK GK+
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+ LF + + G++P+ VTYT ++ G C+ G EA ++ +M ++G P+ TY L+
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K+ +A NL M P +V + ++S ++ + + V+ L E++Q G+ N Y Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I+ C+ ++ A VL +M K G PD V +L++GFC +S A L +M +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD ++ +++HGL + + EA L M+V G +PD VTY ++ G CK G++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLC 471
S+ +M Q + P VV Y ++D LC
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALC 267
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 103/183 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
+ +FRE + G+ NT++Y ++H Q + A + QM G +PD+++Y +++
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C G++E L + E LQR + P+ Y YN +I+ +CK G+V + + ++ GV P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V YTT++SGFC+ G A LF EMK++ +PD +Y +++ + G + +L
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 414 SEM 416
EM
Sbjct: 595 REM 597
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N ++YN ++ C+ +V E L +M G V + V+Y +I G+ Q + + +
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+++ G+ P+ Y+ ++D LC NG+V A V + + + PD Y +I G CK+
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G V LF + K + P+ V+YT+M+ G C+ G EA LF EM G PD TY
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 429 TALIYGHCKAGEMREAFSIHNQM 451
LI H + G+ + + +M
Sbjct: 575 NTLIRAHLRDGDKAASAELIREM 597
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 6/236 (2%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R +P + + ++ +L ++ ++ K +L QM+ G ++ +Y ++I+ +C+
Sbjct: 76 RPFPSI------VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRR 129
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
QL L ++ ++ + G P+ N++++ C + +A ++ +M + G PD+ +
Sbjct: 130 SQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
TLI G + S A L D M K PD V+Y +++GLCK G + A L +M
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+EP V Y +I C + +A ++ +M KG+ PNVVTY L+ LC G
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 127/267 (47%), Gaps = 15/267 (5%)
Query: 138 DLKMAQTLVFEFWATPRLD-VHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXX 196
D+ +L+ F RLD H+F+ + KD + + ++ +
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFE------LMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 197 XXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYN 254
F ++ G+V + + + T + G F+ ++ A VF++ GV + M+Y+
Sbjct: 414 EGMELFREMSQRGLVGNTVT---YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
I+L LC GKV+ A + ++ PD+ +Y ++I G C+ G++E L L K
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
G++PN Y ++ C+ G EA+ + REM + G PD+ Y TLI + G+ +A+
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 375 HKLFDEMKQKKIVPDFVS---YTSMLH 398
+L EM+ + V D + T+MLH
Sbjct: 591 AELIREMRSCRFVGDASTIGLVTNMLH 617
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 138/241 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + ++ + + + + YN ++ LC+ + +A NL +M+ G PDV +Y +IS
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C G+ +L+ ++ + + PN ++ +ID K G++VEAE++ EM K + P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y++LI+GFC + A +F+ M K P+ V+Y++++ G CK ++ E +LF
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM GL + VTYT LI+G +A + A + QMV G+ PN++TY IL+DGLCK
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 474 G 474
G
Sbjct: 482 G 482
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 139/239 (58%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + E+G +T ++ ++H L K EA L+ QM G PD+V+YG +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G ++ L L++++++ + + +YN IID LCK + +A + EM G+ P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y++LIS C G S A +L +M ++KI P+ V++++++ K GK+VEA KL+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EM+ ++PD TY++LI G C + EA + M+ K PNVVTY+ L+ G CK
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 133/238 (55%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A+ + + + G + ++Y V++ LC+ G + A +LL +ME DVV Y II
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
G C+ ++ L L E+ KG+RP+ + Y+++I LC G +A R+L +M + +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+ V ++ LI F K G + A KL+DEM ++ I PD +Y+S+++G C ++ EA +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
F M+ P+ VTY+ LI G CKA + E + +M Q+GL N VTYT L+ G
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 148/273 (54%), Gaps = 1/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + GI V + + ++ LC N+ A R+ + E ++ N ++++ ++ +
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLC-NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK+ EA L +M PD+ +Y +I+G+C +L++ + E + K PN
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y+ +I CK V E + REM++ G+ + V YTTLI GF ++ + A +F +M
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ P+ ++Y +L GLCK GK+ +A +F + +EPD TY +I G CKAG++
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + + + KG++PNV+ Y ++ G C++G
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 135/240 (56%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I + + +G+S + +Y+I ++ C+ ++ A +L +M G PD+V+ +++G
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG 162
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
YC ++ + L++++ G +P+ + + +I L + + EA ++ +M + G PD
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y T+++G CK G++ A L +M++ KI D V Y +++ GLCK M +A LF+
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFT 282
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
EM G+ PD TY++LI C G +A + + M+++ + PNVVT++ L+D K G
Sbjct: 283 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 342
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 138/238 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V + ++G + ++ + +L+ C ++ +A L+ QM G PD ++ +I
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G + + + L++++ ++G +P+ Y +++ LCK G++ A +L++M K +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V+Y T+I G CK ++ A LF EM K I PD +Y+S++ LC G+ +A +L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
S+M+ + P+ VT++ALI K G++ EA ++++M+++ + P++ TY+ L++G C
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 132/247 (53%), Gaps = 1/247 (0%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A +++ E + + + +Y+ +++ C ++ EA ++ M P+VV+
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I G+C+ ++E+ ++L E+ ++GL N Y +I + + A+ V ++M
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
GV P+ + Y L+ G CK+G ++ A +F+ +++ + PD +Y M+ G+CK GK+
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+ +LF + + G+ P+ + Y +I G C+ G EA S+ +M + G PN TY L+
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 468 DGLCKRG 474
+ G
Sbjct: 581 RARLRDG 587
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 120/218 (55%)
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
I+ + L + KV +A +L M P +V + ++S ++ + E V+ L E++Q
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
G+ + Y Y+ I+ C+ ++ A VL +M K G PD V ++L++G+C S +S A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
L D+M + PD ++T+++HGL K EA L +M+ G +PD VTY ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 435 HCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
CK G++ A S+ +M + + +VV Y ++DGLCK
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 124/236 (52%), Gaps = 6/236 (2%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R +P + + +N +L ++ ++ K + +L QM+ G D+ +Y + I+ +C+
Sbjct: 78 RPFPSI------VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
QL L ++ ++ + G P+ +++++ C + + +A ++ +M + G PD +
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
TTLI G S A L D+M Q+ PD V+Y ++++GLCK G + A L +M
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+E D V Y +I G CK M +A ++ +M KG+ P+V TY+ L+ LC G
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 1/214 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ + +FRE + G+ NT++Y ++H Q A + QM G P++++Y ++
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G C+ G+L K + + E LQR + P+ Y YN +I+ +CK G+V + + ++ GV
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ + Y T+ISGFC+ G+ A L +MK+ +P+ +Y +++ + G + +
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAE 594
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
L EM G D T L+ G + ++F
Sbjct: 595 LIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 627
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N ++Y+ ++ C+ +V+E L +M G V + V+Y +I G+ Q + +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+++ G+ PN YN ++D LCKNG++ +A V + + + PD Y +I G CK+
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G V +LF + K + P+ ++Y +M+ G C+ G EA L +M G P+ TY
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
LI + G+ + + +M G + T ++ + L
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 139/243 (57%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+ + + E+G+ + + Y ++ SLC+ G V A +L QME G PDVV Y +
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
++G C G+ L+ + ++ ++P+ +N +ID K G+ ++AE + EM + +
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ YT+LI+GFC G V A ++F M+ K PD V+YTS+++G CK K+ +A K
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+F EM GL + +TYT LI G + G+ A + + MV +G+ PN+ TY +L+ LC
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 472 KRG 474
G
Sbjct: 399 YNG 401
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 138/229 (60%)
Query: 244 VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEK 303
+GVS + + N++++ CQ + A + L +M G PD+V++ +I+G+C ++E+
Sbjct: 101 MGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEE 160
Query: 304 VLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
+ ++ ++ G++P+ +Y IID LCKNG V A + +M +G+ PD V+YT+L++
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
G C SG A L M ++KI PD +++ +++ K GK ++A +L++EM+ M + P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ TYT+LI G C G + EA + M KG P+VV YT L++G CK
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 148/266 (55%), Gaps = 1/266 (0%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
G+ + +CNL + C + + A + ++G + +++ +++ C +++E
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQ-PYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEE 160
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
A +++ QM G PDVV Y II C+ G + L L ++++ G+RP+ +Y ++++
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
LC +G +A+ +LR MTK + PD + + LI F K G A +L++EM + I P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIH 448
+ +YTS+++G C G + EA ++F M G PD V YT+LI G CK ++ +A I
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 449 NQMVQKGLTPNVVTYTILVDGLCKRG 474
+M QKGLT N +TYT L+ G + G
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVG 366
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 137/244 (56%), Gaps = 3/244 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +F + G+ + + Y +++ LC G+ ++A +LL M PDV+++ +I
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + G+ +L E+ R + PN + Y ++I+ C G V EA ++ M G FP
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V YT+LI+GFCK V A K+F EM QK + + ++YT+++ G ++GK A ++F
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK---GLTPNVVTYTILVDGL 470
S M+ G+ P+ TY L++ C G++++A I M ++ G+ PN+ TY +L+ GL
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 471 CKRG 474
C G
Sbjct: 436 CYNG 439
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 138/250 (55%), Gaps = 4/250 (1%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A ++ E + ++ N +Y +++ C G V EA + ME G PDVV+
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I+G+C+ +++ +K+ E+ +KGL N Y +I + G+ A+ V M
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK---IVPDFVSYTSMLHGLCKIG 404
GV P+ Y L+ C +G V A +F++M++++ + P+ +Y +LHGLC G
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
K+ +A +F +M ++ +TYT +I G CKAG+++ A ++ + KG+ PNVVTYT
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499
Query: 465 ILVDGLCKRG 474
++ GL + G
Sbjct: 500 TMISGLFREG 509
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 125/224 (55%)
Query: 251 MSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEE 310
+ + +L+ + ++ K NL ++ G D+ + ++++ +CQ Q + +
Sbjct: 73 IDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGK 132
Query: 311 LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
+ + G P+ + ++I+ C + EA ++ +M + G+ PD V+YTT+I CK+G+
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTA 430
V+ A LFD+M+ I PD V YTS+++GLC G+ +A L M ++PD +T+ A
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
LI K G+ +A ++N+M++ + PN+ TYT L++G C G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 118/218 (54%), Gaps = 4/218 (1%)
Query: 257 LHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL 316
LHSL + EA +L M +P ++ + +++ ++ + + V+ L + LQ G+
Sbjct: 48 LHSL----QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGV 103
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
+ Y N +++ C++ + A L +M K G PD V +T+LI+GFC + A
Sbjct: 104 SHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS 163
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+ ++M + I PD V YT+++ LCK G + A LF +M G+ PD V YT+L+ G C
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+G R+A S+ M ++ + P+V+T+ L+D K G
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+++F E + G++ NT++Y ++ Q+GK A + M G P++ +Y V++
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 294 GYCQIGQLEKVLKLMEELQRK---GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
C G+++K L + E++Q++ G+ PN + YN ++ LC NG++ +A V +M K
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ + YT +I G CK+G V A LF + K + P+ V+YT+M+ GL + G EAH
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH 515
Query: 411 KLFSEM 416
LF +M
Sbjct: 516 VLFRKM 521
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM---EFCGNVPDVVSYGV 290
A VF GV N +YN++LH LC GKVK+A + M E G P++ +Y V
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
++ G C G+LEK L + E+++++ + Y II +CK G+V A + + G
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKI 386
V P+ V YTT+ISG + G AH LF +MK+ +
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 137/238 (57%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I +F G+ + SYNIV++ LC+ + A +++ +M G PDVV+ +I+G
Sbjct: 89 ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
+CQ ++ + L+ +++ G RP+ +YN IID CK G V +A + M + GV D
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y +L++G C SG S A +L +M + IVP+ +++T+++ K GK EA KL+
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EM ++PD TY +LI G C G + EA + + MV KG P+VVTY L++G CK
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 152/273 (55%), Gaps = 12/273 (4%)
Query: 203 HKLLSYGIVVS-VDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
H L SY IV++ + C+ F+ A+ V + + G + ++ + +++ C
Sbjct: 102 HDLYSYNIVINCLCRCSRFVI-----------ALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
Q +V +A +L+ +ME G PDVV Y II G C+IG + ++L + ++R G+R +
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN+++ LC +G +A R++R+M + P+ + +T +I F K G S A KL++EM
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
++ + PD +Y S+++GLC G++ EA ++ M+ G PD VTY LI G CK+ +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
E + +M Q+GL + +TY ++ G + G
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 144/272 (52%), Gaps = 32/272 (11%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +F GV + ++YN ++ LC G+ +A L+ M VP+V+++ +I
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + G+ + +KL EE+ R+ + P+ + YN++I+ LC +G V EA+++L M G P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V Y TLI+GFCKS V KLF EM Q+ +V D ++Y +++ G + G+ A ++F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 414 SEM-----------LVMGL---------------------EPDEVTYTALIYGHCKAGEM 441
S M L+ GL E D TY +I+G CK G +
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+A+ + + KGL P+VV+YT ++ G C++
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 131/238 (55%), Gaps = 3/238 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
AI + + E+G + + YN ++ C++G V +A L +ME G D V+Y +++
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C G+ +LM ++ + + PN + +ID+ K G+ EA ++ EMT+ V P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y +LI+G C G V A ++ D M K +PD V+Y ++++G CK ++ E KLF
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
EM GL D +TY +I G+ +AG A I ++M + PN+ TY+IL+ GLC
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLC 392
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 127/231 (54%), Gaps = 4/231 (1%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A++++ E V + +YN +++ LC G+V EA +L M G +PDVV+
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I+G+C+ ++++ KL E+ ++GL + YN II + G A+ + M
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
P+ Y+ L+ G C + V A LF+ M++ +I D +Y ++HG+CKIG +
Sbjct: 377 SR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
+A LF + GL+PD V+YT +I G C+ + ++ ++ +M + GL P
Sbjct: 434 DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 124/218 (56%), Gaps = 6/218 (2%)
Query: 263 LGKVKEAHN------LLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL 316
L K+ ++ N L ME CG D+ SY ++I+ C+ + L ++ ++ + G
Sbjct: 76 LSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGY 135
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
P+ +++I+ C+ V +A ++ +M + G PD V+Y T+I G CK G V+ A +
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
LFD M++ + D V+Y S++ GLC G+ +A +L +M++ + P+ +T+TA+I
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
K G+ EA ++ +M ++ + P+V TY L++GLC G
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%)
Query: 266 VKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN 325
++E +L +M +P +V + ++S + + V+ L ++ G+ + Y YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
+I+ LC+ V A V+ +M K G PD V ++LI+GFC+ V A L +M++
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 386 IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
PD V Y +++ G CKIG + +A +LF M G+ D VTY +L+ G C +G +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 446 SIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ MV + + PNV+T+T ++D K G
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 368 SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
S N+ LF +M Q + +P V ++ +L + K LF M V G+ D +
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
Y +I C+ A S+ +M++ G P+VVT + L++G C+
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ 151
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 155/276 (56%), Gaps = 7/276 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F+++ + G +V + N +T LC A + R+ + + N +++ ++ +
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLC-EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 262 QLGKV---KEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
++GK+ KE +N+++QM PDV +YG +I+G C G L++ ++ ++R G P
Sbjct: 270 KVGKLMEAKELYNVMIQMSV---YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
NE +Y +I CK+ V + ++ EM++ GV + + YT LI G+C G A ++F
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
++M ++ PD +Y +L GLC GK+ +A +F M ++ + VTYT +I G CK
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G++ +AF + + KG+ PNV+TYT ++ G C+RG
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 134/241 (55%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
AI +F + +G N ++Y ++ LC+ + A L QM G+ P+VV+Y +++
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+IG+ L+ ++ ++ + PN + +ID K G+++EA+ + M + V+P
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y +LI+G C G + A ++F M++ P+ V YT+++HG CK ++ + K+F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM G+ + +TYT LI G+C G A + NQM + P++ TY +L+DGLC
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 474 G 474
G
Sbjct: 412 G 412
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 147/273 (53%), Gaps = 1/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ GI + +CN+ + +C + + RA + ++G + +++ +L+ C
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQ-PCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
++++A L Q+ G P+VV+Y +I C+ L ++L ++ G RPN
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN ++ LC+ G +A +LR+M K + P+ + +T LI F K G + A +L++ M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
Q + PD +Y S+++GLC G + EA ++F M G P+EV YT LI+G CK+ +
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ I +M QKG+ N +TYT+L+ G C G
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 130/238 (54%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I +F + +G+ + NIV+H +C + A L +M G PD+V++ +++G
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
YC ++E + L +++ G +PN Y +I LCKN + A + +M +G P+
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y L++G C+ G A L +M +++I P+ +++T+++ K+GK++EA +L++
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
M+ M + PD TY +LI G C G + EA + M + G PN V YT L+ G CK
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 119/223 (53%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
SY +L + + +A +L +M +P ++ + ++S ++ + + V+ L E++
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
Q G+ P N ++ +C + + A L +M K G PD V +T+L++G+C +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A LFD++ P+ V+YT+++ LCK + A +LF++M G P+ VTY AL
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ G C+ G +A + M+++ + PNV+T+T L+D K G
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG 272
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 3/171 (1%)
Query: 222 TRLCGNFEGKKR---AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
T L F KR +++F E + GV NT++Y +++ C +G+ A + QM
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
PD+ +Y V++ G C G++EK L + E ++++ + N Y II +CK G+V +
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
A + + G+ P+ + YTT+ISGFC+ G + A LF +MK+ +P+
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 144 TLVFEFWATPRL-DVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXF 202
TL+ F + R+ D +F + +++ + A+ + + V Q F
Sbjct: 333 TLIHGFCKSKRVEDGMKIFYEMSQKGVV------ANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
+++ S + + N+ L LC N GK ++A+ +F + + N ++Y I++ +C
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCN--GKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+LGKV++A +L + G P+V++Y +ISG+C+ G + + L ++++ G PNE
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504
Query: 322 VY 323
VY
Sbjct: 505 VY 506
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 141/230 (61%), Gaps = 4/230 (1%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
E G + +++ +++ LC G+V +A L+ +M G+ P YG II+G C++G E
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTE 58
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
L L+ +++ ++ + +YN IID LCK+G + A+ + EM G+FPD + Y+ +I
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
FC+SG + A +L +M +++I PD V+++++++ L K GK+ EA +++ +ML G+
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
P +TY ++I G CK + +A + + M K +P+VVT++ L++G CK
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 136/242 (56%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+ + + E + + + YN ++ LC+ G A NL +M G PDV++Y +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I +C+ G+ +L+ ++ + + P+ ++ +I+ L K G+V EAE + +M + G+
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
FP + Y ++I GFCK ++ A ++ D M K PD V+++++++G CK ++ +
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+F EM G+ + VTYT LI+G C+ G++ A + N M+ G+ PN +T+ ++ LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Query: 472 KR 473
+
Sbjct: 298 SK 299
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 132/230 (57%), Gaps = 1/230 (0%)
Query: 218 NLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
N + RLC + A +F E + G+ + ++Y+ ++ S C+ G+ +A LL M
Sbjct: 80 NAIIDRLCKDGH-HIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
PDVV++ +I+ + G++ + ++ ++ R+G+ P YN++ID CK +
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
+A+R+L M PD V ++TLI+G+CK+ V ++F EM ++ IV + V+YT+++
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
HG C++G + A L + M+ G+ P+ +T+ +++ C E+R+AF+I
Sbjct: 259 HGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 99/183 (54%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A ++ R+ E ++ + ++++ ++++L + GKV EA + M G P ++Y +I
Sbjct: 130 AEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMID 189
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C+ +L ++++ + K P+ ++ +I+ CK V + EM + G+
Sbjct: 190 GFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 249
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V YTTLI GFC+ G++ AA L + M + P+++++ SML LC ++ +A +
Sbjct: 250 NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309
Query: 414 SEM 416
++
Sbjct: 310 EDL 312
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 31/160 (19%)
Query: 346 MTKHGVFPDNVVYTTL-------------------------------ISGFCKSGNVSAA 374
M + G PD V +TTL I+G CK G+ +A
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
L +M++ I V Y +++ LCK G + A LF+EM G+ PD +TY+ +I
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 435 HCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
C++G +A + M+++ + P+VVT++ L++ L K G
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEG 160
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 84/158 (53%), Gaps = 1/158 (0%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A ++ + G+ T++YN ++ C+ ++ +A +L M PDVV+
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
+ +I+GYC+ +++ +++ E+ R+G+ N Y +I C+ G++ A+ +L M
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
GV P+ + + ++++ C + A + +++++ +
Sbjct: 279 SSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 146/272 (53%), Gaps = 14/272 (5%)
Query: 205 LLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
L++YG+VV+ LC G+ + A + + + + + +N ++ SLC+
Sbjct: 150 LVTYGVVVN---------GLCKRGDID---LAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
V +A NL +ME G P+VV+Y +IS C G+ +L+ ++ K + PN
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
+N +ID K G+ VEAE++ +M K + PD Y +LI+GFC + A ++F+ M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K PD +Y +++ G CK ++ + +LF EM GL D VTYT LI G G+
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + QMV G+ P+++TY+IL+DGLC G
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 147/271 (54%), Gaps = 5/271 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
K++ G S+ + + L C GK+ A+ + + E+G +T+++ ++H L
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYC---HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
K EA L+ +M G P++V+YGV+++G C+ G ++ L+ +++ + +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
++N IID LCK V +A + +EM G+ P+ V Y++LIS C G S A +L +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+KKI P+ V++ +++ K GK VEA KL +M+ ++PD TY +LI G C +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+A + MV K P++ TY L+ G CK
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 141/257 (54%), Gaps = 1/257 (0%)
Query: 218 NLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
N + LC + A+ +F+E G+ N ++Y+ ++ LC G+ +A LL M
Sbjct: 189 NTIIDSLC-KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
P++V++ +I + + G+ + KL +++ ++ + P+ + YN++I+ C + +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
+A+++ M FPD Y TLI GFCKS V +LF EM + +V D V+YT+++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
GL G A K+F +M+ G+ PD +TY+ L+ G C G++ +A + + M + +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 458 PNVVTYTILVDGLCKRG 474
++ YT +++G+CK G
Sbjct: 428 LDIYIYTTMIEGMCKAG 444
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 146/272 (53%), Gaps = 1/272 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + GI +V + + ++ LC ++ A ++ + E ++ N +++N ++ +
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK EA L M PD+ +Y +I+G+C +L+K ++ E + K P+
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I CK+ V + + REM+ G+ D V YTTLI G G+ A K+F +M
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ PD ++Y+ +L GLC GK+ +A ++F M ++ D YT +I G CKAG++
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ + + + KG+ PNVVTY ++ GLC +
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 130/240 (54%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I + + +G+S N +YNI+++ C+ ++ A LL +M G P +V+ +++G
Sbjct: 30 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 89
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
YC ++ + L++++ G RP+ + +I L + + EA ++ M + G P+
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 149
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y +++G CK G++ A L ++M+ KI D V + +++ LCK + +A LF
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
EM G+ P+ VTY++LI C G +A + + M++K + PN+VT+ L+D K G
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
H L +Y I++ N F R A+ + + ++G + ++ + +L+ C
Sbjct: 43 HNLYTYNILI-----NCFCRR-----SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 92
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
++ +A L+ QM G PD +++ +I G + + + L++ + ++G +PN
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 152
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y +++ LCK G++ A +L +M + D V++ T+I CK +V A LF EM+
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K I P+ V+Y+S++ LC G+ +A +L S+M+ + P+ VT+ ALI K G+
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
EA +H+ M+++ + P++ TY L++G C
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 122/222 (54%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
+ + +YN +++ C ++ +A + M PD+ +Y +I G+C+ ++E
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
+L E+ +GL + Y +I L +G+ A++V ++M GV PD + Y+ L+ G
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
C +G + A ++FD M++ +I D YT+M+ G+CK GK+ + LF + + G++P+
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
VTY +I G C ++EA+++ +M + G P+ TY L+
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 108/191 (56%)
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
+P + + ++S ++ + + V+ L E++QR G+ N Y YN +I+ C+ ++ A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
+L +M K G P V ++L++G+C +S A L D+M + PD +++T+++HGL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
K EA L M+ G +P+ VTY ++ G CK G++ AF++ N+M + +VV
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 462 TYTILVDGLCK 472
+ ++D LCK
Sbjct: 187 IFNTIIDSLCK 197
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
+YN ++ C+ +V++ L +M G V D V+Y +I G G + K+ +++
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
G+ P+ Y+ ++D LC NG++ +A V M K + D +YTT+I G CK+G V
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
LF + K + P+ V+Y +M+ GLC + EA+ L +M G PD TY L
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 432 IYGHCKAGEMREAFSIHNQM 451
I H + G+ + + +M
Sbjct: 507 IRAHLRDGDKAASAELIREM 526
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 118/222 (53%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
+N +L ++ ++ K +L +M+ G ++ +Y ++I+ +C+ Q+ L L+ ++
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+ G P+ +++++ C + +A ++ +M + G PD + +TTLI G S
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A L D M Q+ P+ V+Y +++GLCK G + A L ++M +E D V + +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
CK + +A ++ +M KG+ PNVVTY+ L+ LC G
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 110/215 (51%), Gaps = 1/215 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++S +D+ N + C + + + +FRE G+ +T++Y ++ L
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKS-KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
G A + QM G PD+++Y +++ G C G+LEK L++ + +Q+ ++ + Y
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+Y +I+ +CK G+V + + ++ GV P+ V Y T+ISG C + A+ L +M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
K+ +PD +Y +++ + G + +L EM
Sbjct: 492 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +VF++ GV + M+Y+I+L LC GK+++A + M+ D+ Y +I
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G+++ L L KG++PN YN +I LC + EA +L++M + G P
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS---YTSMLH 398
D+ Y TLI + G+ +A+ +L EM+ + V D + +MLH
Sbjct: 499 DSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 546
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 64/125 (51%)
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M K P + L+S K L ++M++ I + +Y +++ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ A L +M+ +G EP VT ++L+ G+C + +A ++ +QMV+ G P+ +T+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 466 LVDGL 470
L+ GL
Sbjct: 121 LIHGL 125
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 155/303 (51%), Gaps = 37/303 (12%)
Query: 207 SYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV 266
S+GI ++ +CNL + LC + + A +V E P +G+ N ++Y +L G +
Sbjct: 184 SFGITPNIFTCNLLVKALCKKND-IESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 267 KEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN-- 324
+ A +L +M G PD +Y V++ GYC++G+ + +M+++++ + PNE Y
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 325 ---------------------------------NIIDLLCKNGEVVEAERVLREMTKHGV 351
+ID LC++ +V EA + R+M K+
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PDN + +TLI CK G V+ A KLFDE +K +P ++Y +++ G+C+ G++ EA +
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGR 421
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
L+ +M +P+ TY LI G K G ++E + +M++ G PN T+ IL +GL
Sbjct: 422 LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQ 481
Query: 472 KRG 474
K G
Sbjct: 482 KLG 484
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 148/310 (47%), Gaps = 40/310 (12%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGN--FEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F ++ +G+ SV S N L L N F+ + +E G++ N + N+++ +
Sbjct: 143 FLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKE--SFGITPNIFTCNLLVKA 200
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
LC+ ++ A+ +L ++ G VP++V+Y I+ GY G +E +++EE+ +G P+
Sbjct: 201 LCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPD 260
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
Y ++D CK G EA V+ +M K+ + P+ V Y +I CK A +FD
Sbjct: 261 ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFD 320
Query: 380 EMKQKKIVPDF-----------------------------------VSYTSMLHGLCKIG 404
EM ++ +PD ++++H LCK G
Sbjct: 321 EMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
++ EA KLF E G P +TY LI G C+ GE+ EA + + M ++ PN TY
Sbjct: 381 RVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYN 439
Query: 465 ILVDGLCKRG 474
+L++GL K G
Sbjct: 440 VLIEGLSKNG 449
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 4/252 (1%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQ-MEFCGNV 282
L G +E ++R+F P+ GV + S N +L+ L Q + H + E G
Sbjct: 132 LAGRYES---SMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGIT 188
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P++ + +++ C+ +E K+++E+ GL PN Y I+ G++ A+RV
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
L EM G +PD YT L+ G+CK G S A + D+M++ +I P+ V+Y M+ LCK
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
K EA +F EML PD +I C+ ++ EA + +M++ P+
Sbjct: 309 EKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 368
Query: 463 YTILVDGLCKRG 474
+ L+ LCK G
Sbjct: 369 LSTLIHWLCKEG 380
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
+ ++H LC+ G+V EA L + E G++P +++Y +I+G C+ G+L + +L +++
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
+ +PN + YN +I+ L KNG V E RVL EM + G FP+ + L G K G
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEED 488
Query: 374 AHKL 377
A K+
Sbjct: 489 AMKI 492
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 143/273 (52%), Gaps = 5/273 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
K++ G S+ + L C +G + A+ + G N + YN V++ LC
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFC---QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ + A + ME G D V+Y +ISG G+ +L+ ++ ++ + PN
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+ +ID K G ++EA + +EM + V P+ Y +LI+GFC G + A +FD M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K PD V+Y +++ G CK ++ + KLF EM GL D TY LI+G+C+AG++
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + N+MV G++P++VTY IL+D LC G
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 136/238 (57%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I ++ + +G+S + S+ I++H C+ ++ A LL +M G P +V+ G +++G
Sbjct: 99 IYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG 158
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
+CQ + ++ + L++ + G PN +YN +I+ LCKN ++ A V M K G+ D
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 218
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y TLISG SG + A +L +M ++KI P+ + +T+++ K G ++EA L+
Sbjct: 219 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYK 278
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EM+ + P+ TY +LI G C G + +A + + MV KG P+VVTY L+ G CK
Sbjct: 279 EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 131/241 (54%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A R+ R+ + + N + + ++ + + G + EA NL +M VP+V +Y +I+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C G L + + + KG P+ YN +I CK+ V + ++ EMT G+
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y TLI G+C++G ++ A K+F+ M + PD V+Y +L LC GK+ +A +
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
++ ++ D +TY +I G C+ +++EA+ + + +KG+ P+ + Y ++ GLC++
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 474 G 474
G
Sbjct: 478 G 478
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 136/263 (51%), Gaps = 3/263 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNF--EGKKRAIR-VFREYPEVGVSWNTMSYNIVLHSL 260
+LL + +D +F T L F EG R +++E V N +YN +++
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
C G + +A + M G PDVV+Y +I+G+C+ ++E +KL E+ +GL +
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
+ YN +I C+ G++ A++V M GV PD V Y L+ C +G + A + ++
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
+++ ++ D ++Y ++ GLC+ K+ EA LF + G++PD + Y +I G C+ G
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 441 MREAFSIHNQMVQKGLTPNVVTY 463
REA + +M + G P+ Y
Sbjct: 480 QREADKLCRRMKEDGFMPSERIY 502
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 123/219 (56%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
VL + ++ K L +ME G D+ S+ ++I +C+ +L L L+ ++ + G
Sbjct: 85 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAH 375
RP+ ++++ C+ EA ++ M G P+ V+Y T+I+G CK+ +++ A
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
++F M++K I D V+Y +++ GL G+ +A +L +M+ ++P+ + +TALI
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
K G + EA +++ +M+++ + PNV TY L++G C G
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG 303
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 99/191 (51%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G + ++YN ++ C+ +V++ L +M + G V D +Y +I GYCQ G+L
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
K+ + G+ P+ YN ++D LC NG++ +A ++ ++ K + D + Y +I G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
C++ + A LF + +K + PD ++Y +M+ GLC+ G EA KL M G P
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Query: 425 EVTYTALIYGH 435
E Y + H
Sbjct: 499 ERIYDETLRDH 509
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 1/187 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++S G V + N +T C + + + +++F E G+ + +YN ++H C
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKS-KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
Q GK+ A + +M CG PD+V+Y +++ C G++EK L ++E+LQ+ + +
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN II LC+ ++ EA + R +T+ GV PD + Y T+ISG C+ G A KL M
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Query: 382 KQKKIVP 388
K+ +P
Sbjct: 491 KEDGFMP 497
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K +A +L +M +P +V + +++ ++ + + V+ L +++ G+ + Y +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I C+ + A +L +M K G P V +L++GFC+ A L D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
VP+ V Y ++++GLCK + A ++F M G+ D VTY LI G +G +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ MV++ + PNV+ +T L+D K G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 148/272 (54%), Gaps = 14/272 (5%)
Query: 205 LLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
L++YG+VV+ LC G+ + A + + + N + Y+ V+ SLC+
Sbjct: 225 LVTYGVVVN---------GLCKRGDID---LAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
+A NL +ME G P+V++Y +IS C + +L+ ++ + + PN
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
+N +ID K G++VEAE++ EM K + PD Y++LI+GFC + A +F+ M
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K P+ V+Y ++++G CK ++ E +LF EM GL + VTYT LI+G +A +
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + QMV G+ PN++TY L+DGLCK G
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 149/271 (54%), Gaps = 5/271 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
K++ G S+ + + L C GK+ A+ + + E+G +T+++ ++H L
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYC---HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
K EA L+ +M G P++V+YGV+++G C+ G ++ L+ +++ + N
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+Y+ +ID LCK +A + EM GV P+ + Y++LIS C S A +L +M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
++KI P+ V++ +++ K GK+VEA KL+ EM+ ++PD TY++LI G C +
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EA + M+ K PNVVTY L++G CK
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 150/273 (54%), Gaps = 1/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + G+ +V + + ++ LC N+E A R+ + E ++ N +++N ++ +
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLC-NYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK+ EA L +M PD+ +Y +I+G+C +L++ + E + K PN
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I+ CK + E + REM++ G+ + V YTTLI GF ++ + A +F +M
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ P+ ++Y ++L GLCK GK+ +A +F + +EP TY +I G CKAG++
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + + + KG+ P+V+ Y ++ G C++G
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 136/241 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +F E GV N ++Y+ ++ LC + +A LL M P+VV++ +I
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + G+L + KL +E+ ++ + P+ + Y+++I+ C + + EA+ + M FP
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V Y TLI+GFCK+ + +LF EM Q+ +V + V+YT+++HG + A +F
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+M+ G+ P+ +TY L+ G CK G++ +A + + + + P + TY I+++G+CK
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 474 G 474
G
Sbjct: 519 G 519
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 130/240 (54%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I + + +G+S N +YNI+++ C+ ++ A LL +M G P +V+ +++G
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
YC ++ + L++++ G RP+ + +I L + + EA ++ M + G P+
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y +++G CK G++ A L ++M+ KI + V Y++++ LCK +A LF+
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
EM G+ P+ +TY++LI C +A + + M+++ + PNVVT+ L+D K G
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 145/269 (53%), Gaps = 10/269 (3%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
H L +Y I++ N F R A+ + + ++G + ++ + +L+ C
Sbjct: 118 HNLYTYNILI-----NCFCRR-----SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
++ +A L+ QM G PD +++ +I G + + + L++ + ++G +PN
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y +++ LCK G++ A +L +M + + V+Y+T+I CK + A LF EM+
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K + P+ ++Y+S++ LC + +A +L S+M+ + P+ VT+ ALI K G++
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
EA ++++M+++ + P++ TY+ L++G C
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 128/235 (54%), Gaps = 1/235 (0%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A +++ E + + + +Y+ +++ C ++ EA ++ M P+VV+
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I+G+C+ ++++ ++L E+ ++GL N Y +I + + A+ V ++M
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
GV P+ + Y TL+ G CK+G + A +F+ +++ K+ P +Y M+ G+CK GK+
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
+ LF + + G++PD + Y +I G C+ G EA ++ +M + G P+ T
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 119/216 (55%), Gaps = 4/216 (1%)
Query: 257 LHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL 316
LHS+ K+ +A L M +P + + ++S ++ + + V+ L E++QR G+
Sbjct: 61 LHSM----KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
N Y YN +I+ C+ ++ A +L +M K G P V ++L++G+C +S A
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
L D+M + PD +++T+++HGL K EA L M+ G +P+ VTY ++ G C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
K G++ AF++ N+M + NVV Y+ ++D LCK
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 219 LFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
F R C N A VF++ GV N M+YN +L LC+ GK+++A + ++
Sbjct: 445 FFQARDCDN------AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
P + +Y ++I G C+ G++E L L KG++P+ +YN +I C+ G E
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Query: 339 AERVLREMTKHGVFPDN 355
A+ + R+M + G PD+
Sbjct: 559 ADALFRKMREDGPLPDS 575
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 142/244 (58%), Gaps = 2/244 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCG-NVPDVVSYGV 290
KRA +F E E G+S ++ +Y ++ +C++G++ A L+ +M+ G N+ VV +
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV-FNT 404
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+I GYC+ G +++ + + +++KG + + + N I + EA++ L M + G
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
V V YT LI +CK GNV A +LF EM K + P+ ++Y M++ CK GK+ EA
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
KL + M G++PD TYT+LI+G C A + EA + ++M KGL N VTYT+++ GL
Sbjct: 525 KLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
Query: 471 CKRG 474
K G
Sbjct: 585 SKAG 588
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 157/339 (46%), Gaps = 69/339 (20%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVF--------------------- 238
F +++ G+ ++V S + + LC G E K+ I+ F
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK 271
Query: 239 -REYPEV----------GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
R++ V GV +N ++Y +++ + GK+ +A L +M G DV
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +IS C+ G +++ L +EL KGL P+ Y Y +ID +CK GE+ AE ++ EM
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDF----------------- 390
GV VV+ TLI G+C+ G V A ++D M+QK D
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 391 ------------------VSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
VSYT+++ CK G + EA +LF EM G++P+ +TY +I
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
Y +CK G+++EA + M G+ P+ TYT L+ G C
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 144/266 (54%), Gaps = 11/266 (4%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKR-----AIRVFREYPEVGVSWNTMSYNIV 256
F ++ G+ + SC +FL KKR + +FR + GV S IV
Sbjct: 177 FDYMVKKGLSIDERSCIVFLV------AAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 257 LHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL 316
+ LC+ G+V+++ L+ + G P+ +Y II+ Y + V +++ +++ G+
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
N+ Y +++L KNG++ +AE++ EM + G+ D VYT+LIS C+ GN+ A
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
LFDE+ +K + P +Y +++ G+CK+G+M A L +EM G+ +V + LI G+C
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVT 462
+ G + EA I++ M QKG +V T
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFT 436
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 131/249 (52%), Gaps = 3/249 (1%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
G FE +RVF + G+S + S + L + + ++ + +M G V
Sbjct: 168 GMFE---EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITV 224
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
S +++ G C+ G++EK KL++E KG++P Y YN II+ K + E VL+
Sbjct: 225 YSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV 284
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M K GV + V YT L+ K+G +S A KLFDEM+++ I D YTS++ C+ G
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
M A LF E+ GL P TY ALI G CK GEM A + N+M KG+ V +
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 466 LVDGLCKRG 474
L+DG C++G
Sbjct: 405 LIDGYCRKG 413
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 99/188 (52%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G + + N + +L + EA L +M G VSY +I YC+ G +E+
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+L E+ KG++PN YN +I CK G++ EA ++ M +G+ PD+ YT+LI G
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
C + NV A +LF EM K + + V+YT M+ GL K GK EA L+ EM G D
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Query: 425 EVTYTALI 432
YTALI
Sbjct: 609 NKVYTALI 616
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
+++ G+ +S S + C GN E A R+F E GV N ++YN+++++ C
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVE---EAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK+KEA L ME G PD +Y +I G C +++ ++L E+ KGL N
Sbjct: 516 KQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSV 575
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
Y +I L K G+ EA + EM + G DN VYT LI
Sbjct: 576 TYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 333 NGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS 392
NG E RV M K G+ D + K + ++F M + S
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 393 YTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMV 452
T ++ GLC+ G++ ++ KL E V G++P+ TY +I + K + + M
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 453 QKGLTPNVVTYTILVDGLCKRG 474
+ G+ N VTYT+L++ K G
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNG 308
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 141/240 (58%), Gaps = 1/240 (0%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK + A +++E G+S N ++YN ++ C ++ EA+N+L M PD+V+
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
+ +I GYC + +++ +K+ + ++GL N Y+ ++ C++G++ AE + +EM
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
HGV PD + Y L+ G C +G + A ++F+++++ K+ V YT+++ G+CK GK+
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+A LF + G++P+ +TYT +I G CK G + EA + +M + G PN TY L+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 140/241 (58%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + R+ E V + +Y+ ++ SLC+ G + A +L +ME G VV+Y ++
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G+ L++++ + + PN +N ++D+ K G++ EA + +EM G+ P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + Y TL+ G+C +S A+ + D M + K PD V++TS++ G C + ++ + K+F
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ GL + VTY+ L+ G C++G+++ A + +MV G+ P+V+TY IL+DGLC
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 474 G 474
G
Sbjct: 452 G 452
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 155/273 (56%), Gaps = 1/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + GI SV + N + LC + A+ + ++ + N +++N++L
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVLLDVFV 309
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK++EA+ L +M G P++++Y ++ GYC +L + +++ + R P+
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+ ++I C V + +V R ++K G+ + V Y+ L+ GFC+SG + A +LF EM
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
++PD ++Y +L GLC GK+ +A ++F ++ ++ V YT +I G CK G++
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A+++ + KG+ PNV+TYT+++ GLCK+G
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 137/238 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A V + ++G +T ++N ++ L GKV EA L+ +M G PDVV+Y I++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G L L+ +++ + ++ + + Y+ IID LC++G + A + +EM G+
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
V Y +L+ G CK+G + L +M ++IVP+ +++ +L K GK+ EA++L+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
EM+ G+ P+ +TY L+ G+C + EA ++ + MV+ +P++VT+T L+ G C
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 132/227 (58%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G++ N + NI+++ C+ K A+++L ++ G PD ++ +I G G++ +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+ L++ + G +P+ YN+I++ +C++G+ A +LR+M + V D Y+T+I
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
C+ G + AA LF EM+ K I V+Y S++ GLCK GK + L +M+ + P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+T+ L+ K G+++EA ++ +M+ +G++PN++TY L+DG C
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 113/199 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
++VFR + G+ N ++Y+I++ CQ GK+K A L +M G +PDV++YG+++
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C G+LEK L++ E+LQ+ + +Y II+ +CK G+V +A + + GV P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + YT +ISG CK G++S A+ L +M++ P+ +Y +++ + G + + KL
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 414 SEMLVMGLEPDEVTYTALI 432
EM G D + +I
Sbjct: 567 EEMKSCGFSADASSIKMVI 585
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 112/200 (56%)
Query: 275 QMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNG 334
Q+E G ++ + ++I+ +C+ + ++ ++ + G P+ +N +I L G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
+V EA ++ M ++G PD V Y ++++G C+SG+ S A L +M+++ + D +Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK 454
+++ LC+ G + A LF EM G++ VTY +L+ G CKAG+ + + MV +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 455 GLTPNVVTYTILVDGLCKRG 474
+ PNV+T+ +L+D K G
Sbjct: 293 EIVPNVITFNVLLDVFVKEG 312
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K +A L +M +P +V + S + Q VL ++L+ G+ N Y N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I+ C+ + A VL ++ K G PD + TLI G G VS A L D M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD V+Y S+++G+C+ G A L +M ++ D TY+ +I C+ G + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
S+ +M KG+ +VVTY LV GLCK G
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 177 AHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAI 235
A+ + + + Q F +++S+G++ V + + L LC N GK ++A+
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN--GKLEKAL 458
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
+F + + + + Y ++ +C+ GKV++A NL + G P+V++Y V+ISG
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
C+ G L + L+ +++ G PN+ YN +I ++G++ + +++ EM G D
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 32/301 (10%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
+ K+++ G+ V + N+ + C AI + R +S +T++YN V+ LC
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFC-KVGRLSFAISLLRNRV---ISIDTVTYNTVISGLC 172
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR-------- 313
+ G EA+ L +M G +PD VSY +I G+C++G + L++E+
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI 232
Query: 314 --------------------KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G P+ +++II+ LCK G+V+E +LREM + V+P
Sbjct: 233 LLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYP 292
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
++V YTTL+ K+ A L+ +M + I D V YT ++ GL K G + EA K F
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+L P+ VTYTAL+ G CKAG++ A I QM++K + PNVVTY+ +++G K+
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKK 412
Query: 474 G 474
G
Sbjct: 413 G 413
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 137/268 (51%), Gaps = 5/268 (1%)
Query: 209 GIVVSVDSCNLFLT--RLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV 266
GI + + N+ + R G+ EG ++++ + G+ + MS NIV+ LC+ GK+
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDSEG---ILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKM 624
Query: 267 KEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI 326
+EA ++L QM P++ +Y + + + + + + K E L G++ + VYN +
Sbjct: 625 EEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 684
Query: 327 IDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKI 386
I LCK G +A V+ +M G PD V + +L+ G+ +V A + M + I
Sbjct: 685 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744
Query: 387 VPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFS 446
P+ +Y +++ GL G + E K SEM G+ PD+ TY ALI G K G M+ + +
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 804
Query: 447 IHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I+ +M+ GL P TY +L+ G
Sbjct: 805 IYCEMIADGLVPKTSTYNVLISEFANVG 832
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 126/272 (46%), Gaps = 38/272 (13%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK------------------------------ 231
+ K+ S GI S+ SCN+ + LC N GK
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCEN--GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653
Query: 232 ---KRAIRVFREYPEV---GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
KRA +F+ + + G+ + YN ++ +LC+LG K+A ++ ME G +PD
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 713
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
V++ ++ GY + K L + G+ PN YN II L G + E ++ L E
Sbjct: 714 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M G+ PD+ Y LISG K GN+ + ++ EM +VP +Y ++ +GK
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGK 833
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
M++A +L EM G+ P+ TY +I G CK
Sbjct: 834 MLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 132/255 (51%), Gaps = 1/255 (0%)
Query: 220 FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
+ RLC + + + + RE E+ V N ++Y ++ SL + + A L QM
Sbjct: 265 IINRLCKGGKVLEGGL-LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR 323
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G D+V Y V++ G + G L + K + L PN Y ++D LCK G++ A
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
E ++ +M + V P+ V Y+++I+G+ K G + A L +M+ + +VP+ +Y +++ G
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
L K GK A +L EM ++G+E + AL+ + G ++E + MV KG+T +
Sbjct: 444 LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 503
Query: 460 VVTYTILVDGLCKRG 474
+ YT L+D K G
Sbjct: 504 QINYTSLIDVFFKGG 518
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 127/243 (52%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+ ++ + G+ + + Y +++ L + G ++EA + VP+VV+Y +
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 370
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G C+ G L ++ ++ K + PN Y+++I+ K G + EA +LR+M V
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 430
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ Y T+I G K+G A +L EM+ + + ++++ L +IG++ E
Sbjct: 431 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
L +M+ G+ D++ YT+LI K G+ A + +M ++G+ +VV+Y +L+ G+
Sbjct: 491 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 550
Query: 472 KRG 474
K G
Sbjct: 551 KFG 553
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 36/278 (12%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A + F+ E N ++Y ++ LC+ G + A ++ QM +P+VV+Y +
Sbjct: 346 REAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSM 405
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGE---------------- 335
I+GY + G LE+ + L+ +++ + + PN + Y +ID L K G+
Sbjct: 406 INGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV 465
Query: 336 -------------------VVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
+ E + ++++M GV D + YT+LI F K G+ AA
Sbjct: 466 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALA 525
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+EM+++ + D VSY ++ G+ K GK V A + M G+EPD T+ ++
Sbjct: 526 WAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREKGIEPDIATFNIMMNSQR 584
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
K G+ + ++M G+ P++++ I+V LC+ G
Sbjct: 585 KQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENG 622
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 1/199 (0%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
LLSYGI +S N + LC K+A V + G +T+++N ++H
Sbjct: 669 LLSYGIKLSRQVYNTLIATLC-KLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGS 727
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
V++A + M G P+V +Y II G G +++V K + E++ +G+RP+++ YN
Sbjct: 728 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 787
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I K G + + + EM G+ P Y LIS F G + A +L EM ++
Sbjct: 788 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 847
Query: 385 KIVPDFVSYTSMLHGLCKI 403
+ P+ +Y +M+ GLCK+
Sbjct: 848 GVSPNTSTYCTMISGLCKL 866
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 66/168 (39%)
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A R L M GV PD+ ++ +LI F +G +V D VS
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNG----------------LVHDQVSL----- 115
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEP--------------------------------DEV 426
++S+M+ G+ P D V
Sbjct: 116 -------------IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTV 162
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY +I G C+ G EA+ ++MV+ G+ P+ V+Y L+DG CK G
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 210
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 159/327 (48%), Gaps = 12/327 (3%)
Query: 157 VHHLFDQFTERLIYTYKDWGAHPL--VFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSV 214
VH FD R+ + KD+ P + + + G+ +V
Sbjct: 99 VHRPFDSL--RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTV 156
Query: 215 DSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLM 274
S N+ + LC N +++F E P+ G ++ +Y ++ LC+ G++ EA L
Sbjct: 157 ASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFT 216
Query: 275 QMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNG 334
+M P VV+Y +I+G C +++ ++ +EE++ KG+ PN + Y++++D LCK+G
Sbjct: 217 EMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG 276
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
++A + M G P+ V YTTLI+G CK + A +L D M + + PD Y
Sbjct: 277 RSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYG 336
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY-------TALIYGHCKAGEMREAFSI 447
++ G C I K EA EM++ G+ P+ +T+ ++ G C A AF++
Sbjct: 337 KVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTL 395
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ M +G++ V T LV LCK+G
Sbjct: 396 YLSMRSRGISVEVETLESLVKCLCKKG 422
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 136/241 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + ++ + + + + Y ++ +LC V +A NL +M+ G P+VV+Y +I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C G+ +L+ ++ + + PN ++ +ID K G++VEAE++ EM K + P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y++LI+GFC + A +F+ M K P+ V+Y +++ G CK ++ E +LF
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM GL + VTY LI G +AG+ A I +MV G+ P+++TY+IL+DGLCK
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 474 G 474
G
Sbjct: 479 G 479
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 124/230 (53%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G + +Y V++ LC+ G + A +LL +ME DVV Y II C +
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
L L E+ KG+RPN YN++I LC G +A R+L +M + + P+ V ++ LI
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
F K G + A KL+DEM ++ I PD +Y+S+++G C ++ EA +F M+ P+
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
VTY LI G CKA + E + +M Q+GL N VTY L+ GL + G
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 144/251 (57%), Gaps = 1/251 (0%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
LC N++ A+ +F E G+ N ++YN ++ LC G+ +A LL M P
Sbjct: 265 LC-NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
+VV++ +I + + G+L + KL +E+ ++ + P+ + Y+++I+ C + + EA+ +
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
M FP+ V Y TLI GFCK+ V +LF EM Q+ +V + V+Y +++ GL +
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
G A K+F +M+ G+ PD +TY+ L+ G CK G++ +A + + + + P++ TY
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 464 TILVDGLCKRG 474
I+++G+CK G
Sbjct: 504 NIMIEGMCKAG 514
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 129/224 (57%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
NT+++N ++H L K EA L+ +M G PD+ +YG +++G C+ G ++ L L+
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+++++ + + +Y IID LC V +A + EM G+ P+ V Y +LI C
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G S A +L +M ++KI P+ V++++++ K GK+VEA KL+ EM+ ++PD TY
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
++LI G C + EA + M+ K PNVVTY L+ G CK
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 137/247 (55%), Gaps = 1/247 (0%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A +++ E + + + +Y+ +++ C ++ EA ++ M P+VV+
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I G+C+ ++E+ ++L E+ ++GL N YN +I L + G+ A+++ ++M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
GV PD + Y+ L+ G CK G + A +F+ +++ K+ PD +Y M+ G+CK GK+
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+ LF + + G++P+ + YT +I G C+ G EA ++ +M + G PN TY L+
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 468 DGLCKRG 474
+ G
Sbjct: 578 RARLRDG 584
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 137/238 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V + ++G + ++ + +L+ C ++ EA L+ QM P+ V++ +I
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G + + + L++ + +G +P+ + Y +++ LCK G++ A +L++M K +
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V+YTT+I C NV+ A LF EM K I P+ V+Y S++ LC G+ +A +L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
S+M+ + P+ VT++ALI K G++ EA ++++M+++ + P++ TY+ L++G C
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 128/229 (55%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
+S++ SYNI+++ C+ ++ A +L +M G PD+V+ +++GYC ++ + +
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
L++++ +PN +N +I L + + EA ++ M G PD Y T+++G
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
CK G++ A L +M++ KI D V YT+++ LC + +A LF+EM G+ P+
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
VTY +LI C G +A + + M+++ + PNVVT++ L+D K G
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 112/201 (55%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ + +FRE + G+ NT++YN ++ L Q G A + +M G PD+++Y ++
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G C+ G+LEK L + E LQ+ + P+ Y YN +I+ +CK G+V + + ++ GV
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ ++YTT+ISGFC+ G A LF EMK+ +P+ +Y +++ + G + +
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 412 LFSEMLVMGLEPDEVTYTALI 432
L EM G D T + +I
Sbjct: 592 LIKEMRSCGFVGDASTISMVI 612
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N ++YN ++ C+ +V+E L +M G V + V+Y +I G Q G + K+
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+++ G+ P+ Y+ ++D LCK G++ +A V + K + PD Y +I G CK+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G V LF + K + P+ + YT+M+ G C+ G EA LF EM G P+ TY
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
LI + G+ + + +M G + T +++++ L
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 112/207 (54%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K+ +A +L +M +P +V + ++S ++ + + V+ L E +Q + + Y YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I+ C+ ++ A VL +M K G PD V ++L++G+C +S A L D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
+ P+ V++ +++HGL K EA L M+ G +PD TY ++ G CK G++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLC 471
S+ +M + + +VV YT ++D LC
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALC 266
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 135/283 (47%), Gaps = 16/283 (5%)
Query: 138 DLKMAQTLVFEFWATPRLD-VHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXX 196
D+ +L+ F RLD H+F+ + KD + + ++ +
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFE------LMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 197 XXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYN 254
F ++ G+V + + N T + G F+ A ++F++ GV + ++Y+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYN---TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
I+L LC+ GK+++A + ++ PD+ +Y ++I G C+ G++E L L K
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
G++PN +Y +I C+ G EA+ + REM + G P++ Y TLI + G+ +A+
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML 417
+L EM+ V D S SM+ + G++ K + EML
Sbjct: 590 AELIKEMRSCGFVGD-ASTISMVINMLHDGRL---EKSYLEML 628
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 136/243 (55%), Gaps = 1/243 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM-EFCGNVPDVVSYGVI 291
A ++ + GV N +++NI L LC+ K + + ++ + G PD+V+Y +
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I Y ++G L L++M E+ +KG++ N N I+D LCK ++ EA +L K G
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
D V Y TLI GF + V A +++DEMK+ KI P ++ S++ GLC GK A +
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
F E+ GL PD+ T+ ++I G+CK G + +AF +N+ ++ P+ T IL++GLC
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 472 KRG 474
K G
Sbjct: 603 KEG 605
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 138/249 (55%), Gaps = 4/249 (1%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
G+ G A+ + RE + G+ NT++ N +L +LC+ K+ EAHNLL G + D
Sbjct: 430 GDLSG---ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
V+YG +I G+ + ++EK L++ +E+++ + P +N++I LC +G+ A E
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
+ + G+ PD+ + ++I G+CK G V A + ++E + PD + +L+GLCK G
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG- 605
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
M E F L+ E D VTY +I CK +++EA+ + ++M +KGL P+ TY
Sbjct: 606 MTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665
Query: 466 LVDGLCKRG 474
+ L + G
Sbjct: 666 FISLLMEDG 674
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 147/275 (53%), Gaps = 5/275 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVF-REYPEVGVSWNTMSYNIVLHS 259
F ++ G+ ++V + N+ + C EGK + A+ + R E V+ + ++YN +L +
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYC--LEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
+ + G++ + LL+ M+ G VP+ V+Y ++ GYC++G L++ +++E +++ + P+
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
YN +I+ LC G + E ++ M + PD V Y TLI G + G A KL +
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVM-GLEPDEVTYTALIYGHCKA 438
+M+ + + V++ L LCK K + E++ M G PD VTY LI + K
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
G++ A + +M QKG+ N +T ++D LCK
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 229 EGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGK---VKEAHNLLMQMEFCGNVPD 284
EGK A+++F++ + + N ++ N +L L + + A + M G +
Sbjct: 144 EGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLN 203
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
V ++ V+++GYC G+LE L ++E + + + P+ YN I+ + K G + + + +L
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+M K+G+ P+ V Y L+ G+CK G++ A ++ + MKQ ++PD +Y +++GLC
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
G M E +L M + L+PD VTY LI G + G EA + QM G+ N VT+
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 464 TILVDGLCKR 473
I + LCK
Sbjct: 384 NISLKWLCKE 393
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 105/196 (53%), Gaps = 4/196 (2%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK---NGEVVEA 339
P + + +S Y G+ L++ +++ R L+PN N ++ L + + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK-KIVPDFVSYTSMLH 398
V +M K GV + + L++G+C G + A + + M + K+ PD V+Y ++L
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
+ K G++ + +L +M GL P+ VTY L+YG+CK G ++EAF I M Q + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 459 NVVTYTILVDGLCKRG 474
++ TY IL++GLC G
Sbjct: 309 DLCTYNILINGLCNAG 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 107/215 (49%), Gaps = 18/215 (8%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSL 260
F +L G++ + N + C EG+ ++A + E + + + NI+L+ L
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCK--EGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
C+ G ++A N + V D V+Y +IS +C+ +L++ L+ E++ KGL P+
Sbjct: 602 CKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMT-KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
+ YN+ I LL ++G++ E + +L++ + K G ++ T N + +
Sbjct: 661 FTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVET-------EKNPATSE---- 709
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
++++ + ++Y+ ++ LC G++ E + ++
Sbjct: 710 --SKEELNTEAIAYSDVIDELCSRGRLKEHSRSYT 742
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 185/377 (49%), Gaps = 19/377 (5%)
Query: 106 LVLDFFNWARSRRDKPSLEA------LCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHH 159
L L F W +P LE +CI HI V + A+ ++ E L +
Sbjct: 92 LALKFLKWVVK---QPGLETDHIVQLVCITTHILVRARMYDPARHILKE------LSLMS 142
Query: 160 LFDQFT-ERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCN 218
F L+ TY+ ++P V+D+ + F + YG SV +CN
Sbjct: 143 GKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCN 202
Query: 219 LFLTRLCGNFEGKKRAIRVF-REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
L + + G+ ++ F +E + + + ++NI+++ LC G +++ L+ +ME
Sbjct: 203 AILGSVVKS--GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME 260
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
G P +V+Y ++ YC+ G+ + ++L++ ++ KG+ + YN +I LC++ +
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 320
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
+ +LR+M K + P+ V Y TLI+GF G V A +L +EM + P+ V++ +++
Sbjct: 321 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
G G EA K+F M GL P EV+Y L+ G CK E A + +M + G+
Sbjct: 381 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 440
Query: 458 PNVVTYTILVDGLCKRG 474
+TYT ++DGLCK G
Sbjct: 441 VGRITYTGMIDGLCKNG 457
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 136/244 (55%), Gaps = 1/244 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K AIR++ G + + ++N+++ SLC+ GKV EA + M G +P+ VS+ +
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I+GY G+ K + +E+ + G P + Y +++ LCK G + EAE+ L+ +
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 649
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
D V+Y TL++ CKSGN++ A LF EM Q+ I+PD +YTS++ GLC+ GK V A
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 709
Query: 412 LFSEMLVMG-LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
E G + P++V YT + G KAG+ + QM G TP++VT ++DG
Sbjct: 710 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 769
Query: 471 CKRG 474
+ G
Sbjct: 770 SRMG 773
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 137/241 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + E + G+ + ++Y+ +++ C++G+ K A ++ ++ G P+ + Y +I
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C++G L++ +++ E + +G + + +N ++ LCK G+V EAE +R MT G+ P
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V + LI+G+ SG A +FDEM + P F +Y S+L GLCK G + EA K
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ + D V Y L+ CK+G + +A S+ +MVQ+ + P+ TYT L+ GLC++
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 474 G 474
G
Sbjct: 702 G 702
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 146/268 (54%), Gaps = 1/268 (0%)
Query: 207 SYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV 266
S G+ V + N+ + LC + K + + R+ + + N ++YN +++ GKV
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYL-LLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 267 KEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI 326
A LL +M G P+ V++ +I G+ G ++ LK+ ++ KGL P+E Y +
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 327 IDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKI 386
+D LCKN E A M ++GV + YT +I G CK+G + A L +EM + I
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474
Query: 387 VPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFS 446
PD V+Y+++++G CK+G+ A ++ + +GL P+ + Y+ LIY C+ G ++EA
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 534
Query: 447 IHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I+ M+ +G T + T+ +LV LCK G
Sbjct: 535 IYEAMILEGHTRDHFTFNVLVTSLCKAG 562
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 128/241 (53%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A ++ E G+S N +++N ++ G KEA + ME G P VSYGV++
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ + + ++R G+ Y +ID LCKNG + EA +L EM+K G+ P
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V Y+ LI+GFCK G A ++ + + + P+ + Y+++++ C++G + EA +++
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
M++ G D T+ L+ CKAG++ EA M G+ PN V++ L++G
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596
Query: 474 G 474
G
Sbjct: 597 G 597
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 38/271 (14%)
Query: 242 PEVG---VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
PE+G N +YNI+LH + V + L + G +PD ++ ++ G C+
Sbjct: 783 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 842
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV---------------------- 336
LE LK+++ +G+ + Y +N +I C NGE+
Sbjct: 843 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTC 902
Query: 337 -------------VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
E+ VL EM+K G+ P++ Y LI+G C+ G++ A + +EM
Sbjct: 903 DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 962
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
KI P V+ ++M+ L K GK EA L ML M L P ++T L++ CK G + E
Sbjct: 963 HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 1022
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + M GL ++V+Y +L+ GLC +G
Sbjct: 1023 ALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1053
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 120/240 (50%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
+++ + + GV + ++N+++ C G++ A +L+ M G D + ++S
Sbjct: 848 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + ++ ++ E+ ++G+ P Y +I+ LC+ G++ A V EM H + P
Sbjct: 908 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
NV + ++ K G A L M + K+VP S+T+++H CK G ++EA +L
Sbjct: 968 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 1027
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
M GL+ D V+Y LI G C G+M AF ++ +M G N TY L+ GL R
Sbjct: 1028 VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1087
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 36/285 (12%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
GN +A VF E +VG +Y +L LC+ G ++EA L + D
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
V Y +++ C+ G L K + L E+ ++ + P+ Y Y ++I LC+ G+ V A +E
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 346 MTKHG-VFPDNVVYT-----------------------------------TLISGFCKSG 369
G V P+ V+YT +I G+ + G
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Query: 370 NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYT 429
+ + L EM + P+ +Y +LHG K + + L+ +++ G+ PD++T
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+L+ G C++ + I + +G+ + T+ +L+ C G
Sbjct: 834 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 878
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 133/307 (43%), Gaps = 43/307 (14%)
Query: 208 YGIVVSVDSC--NLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
+ + +VD+ N LT +C GN +A+ +F E + + ++ +Y ++ LC+
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLA---KAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 264 GKVKEAHNLLMQMEFCGNV-PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
GK A + E GNV P+ V Y + G + GQ + + E++ G P+
Sbjct: 702 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 761
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
N +ID + G++ + +L EM P+ Y L+ G+ K +VS + L+ +
Sbjct: 762 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 821
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
I+PD ++ S++ G+C+ + K+ + G+E D T+ LI C GE+
Sbjct: 822 LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 881
Query: 443 EAFS-----------------------------------IHNQMVQKGLTPNVVTYTILV 467
AF + ++M ++G++P Y L+
Sbjct: 882 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 941
Query: 468 DGLCKRG 474
+GLC+ G
Sbjct: 942 NGLCRVG 948
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Query: 230 GKKRAIRVFREYPE-VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
G+ +A FRE + +G + + ++ N ++ ++GK+++ ++LL +M P++ +Y
Sbjct: 738 GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 797
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+++ GY + + L + G+ P++ ++++ +C++ + ++L+
Sbjct: 798 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 857
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
GV D + LIS C +G ++ A L M I D + +M+ L + + E
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 917
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
+ + EM G+ P+ Y LI G C+ G+++ AF + +M+ + P V + +V
Sbjct: 918 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977
Query: 469 GLCKRG 474
L K G
Sbjct: 978 ALAKCG 983
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 148/272 (54%), Gaps = 3/272 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
+ L+ G VV + N L LC GK A R+ +E G + +SYN ++ C
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCE--AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
K+ EA L +M G PD +Y ++I G + ++E+ ++ ++ +R G+ P+ Y
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y+ +ID CK E + EM V P+ VVY LI +C+SG +S A +L ++MK
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K I P+ +YTS++ G+ I ++ EA LF EM + GLEP+ YTALI G+ K G+M
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + +M K + PN +TYT+++ G + G
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDG 764
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 147/271 (54%), Gaps = 1/271 (0%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
++L G V+ S N ++ CG + A E + G+ + +Y+I++ L +
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGK-KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
KV+EA + G +PDV +Y V+I G C+ + E+ + +E+ K ++PN VY
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
N++I C++G + A + +M G+ P++ YT+LI G V A LF+EM+
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
+ + P+ YT+++ G K+G+MV+ L EM + P+++TYT +I G+ + G + E
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + N+M +KG+ P+ +TY + G K+G
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 40/306 (13%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRL--CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F K+ G+ +V + N + L CG ++ A + E G+ ++Y+I++
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYD---EAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
L + ++ +A+ +L +M G P+V+ Y +I + + G L K +++ + + KGL
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREM------TKHGVF--------------------- 352
YN +I CKNG+ AER+L+EM G F
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 353 --------PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
P + TTLISG CK G S A +L+ + K V D + ++LHGLC+ G
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
K+ EA ++ E+L G D V+Y LI G C ++ EAF ++MV++GL P+ TY+
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 465 ILVDGL 470
IL+ GL
Sbjct: 580 ILICGL 585
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 1/269 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
++LS G V+ S + LC + A+R E +S ++ LC
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDS-ALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK +A L Q G V D + ++ G C+ G+L++ ++ +E+ +G +
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I C ++ EA L EM K G+ PDN Y+ LI G V A + +D+
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K+ ++PD +Y+ M+ G CK + E + F EM+ ++P+ V Y LI +C++G +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGL 470
A + M KG++PN TYT L+ G+
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGM 690
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 141/275 (51%), Gaps = 6/275 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHS 259
F L + G+ S +CN+ LT L E +K A V + GVS + + +++
Sbjct: 214 FPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINA 269
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
C+ GKV+EA L +ME G P+VV++ +I G G+ ++ E++ +G+ P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
Y+ ++ L + + +A VL+EMTK G P+ +VY LI F ++G+++ A ++ D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
M K + +Y +++ G CK G+ A +L EML +G ++ ++T++I C
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A +M+ + ++P T L+ GLCK G
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 2/224 (0%)
Query: 224 LCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN 281
+CG F K AI+ + + G+ + +Y++++ C+ + +E +M
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
P+ V Y +I YC+ G+L L+L E+++ KG+ PN Y ++I + V EA+
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
+ EM G+ P+ YT LI G+ K G + L EM K + P+ ++YT M+ G
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
+ G + EA +L +EM G+ PD +TY IYG+ K G + EAF
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 10/210 (4%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
C E + F E V NT+ YN ++ + C+ G++ A L M+ G P+
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
+Y +I G I ++E+ L EE++ +GL PN + Y +ID K G++V+ E +LR
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
EM V P+ + YT +I G+ + GNV+ A +L +EM++K IVPD ++Y ++G K G
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
++EA K DE Y A+I G
Sbjct: 800 GVLEAFK----------GSDEENYAAIIEG 819
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 1/270 (0%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
++S G+ ++ + N + C N + A R+ +E +G + N S+ V+ LC
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADN-AERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
A + +M P +ISG C+ G+ K L+L + KG + N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
++ LC+ G++ EA R+ +E+ G D V Y TLISG C + A DEM ++
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
+ PD +Y+ ++ GL + K+ EA + + + G+ PD TY+ +I G CKA E
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++M+ K + PN V Y L+ C+ G
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 148/272 (54%), Gaps = 3/272 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
+ L+ G VV + N L LC GK A R+ +E G + +SYN ++ C
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCE--AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
K+ EA L +M G PD +Y ++I G + ++E+ ++ ++ +R G+ P+ Y
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y+ +ID CK E + EM V P+ VVY LI +C+SG +S A +L ++MK
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K I P+ +YTS++ G+ I ++ EA LF EM + GLEP+ YTALI G+ K G+M
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + +M K + PN +TYT+++ G + G
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDG 764
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 147/271 (54%), Gaps = 1/271 (0%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
++L G V+ S N ++ CG + A E + G+ + +Y+I++ L +
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGK-KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
KV+EA + G +PDV +Y V+I G C+ + E+ + +E+ K ++PN VY
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
N++I C++G + A + +M G+ P++ YT+LI G V A LF+EM+
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
+ + P+ YT+++ G K+G+MV+ L EM + P+++TYT +I G+ + G + E
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + N+M +KG+ P+ +TY + G K+G
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 40/306 (13%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRL--CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F K+ G+ +V + N + L CG ++ A + E G+ ++Y+I++
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYD---EAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
L + ++ +A+ +L +M G P+V+ Y +I + + G L K +++ + + KGL
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREM------TKHGVF--------------------- 352
YN +I CKNG+ AER+L+EM G F
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 353 --------PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
P + TTLISG CK G S A +L+ + K V D + ++LHGLC+ G
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
K+ EA ++ E+L G D V+Y LI G C ++ EAF ++MV++GL P+ TY+
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 465 ILVDGL 470
IL+ GL
Sbjct: 580 ILICGL 585
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 1/269 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
++LS G V+ S + LC + A+R E +S ++ LC
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDS-ALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK +A L Q G V D + ++ G C+ G+L++ ++ +E+ +G +
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I C ++ EA L EM K G+ PDN Y+ LI G V A + +D+
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K+ ++PD +Y+ M+ G CK + E + F EM+ ++P+ V Y LI +C++G +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGL 470
A + M KG++PN TYT L+ G+
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGM 690
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 141/275 (51%), Gaps = 6/275 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHS 259
F L + G+ S +CN+ LT L E +K A V + GVS + + +++
Sbjct: 214 FPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINA 269
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
C+ GKV+EA L +ME G P+VV++ +I G G+ ++ E++ +G+ P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
Y+ ++ L + + +A VL+EMTK G P+ +VY LI F ++G+++ A ++ D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
M K + +Y +++ G CK G+ A +L EML +G ++ ++T++I C
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A +M+ + ++P T L+ GLCK G
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 2/224 (0%)
Query: 224 LCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN 281
+CG F K AI+ + + G+ + +Y++++ C+ + +E +M
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
P+ V Y +I YC+ G+L L+L E+++ KG+ PN Y ++I + V EA+
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
+ EM G+ P+ YT LI G+ K G + L EM K + P+ ++YT M+ G
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
+ G + EA +L +EM G+ PD +TY IYG+ K G + EAF
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 10/210 (4%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
C E + F E V NT+ YN ++ + C+ G++ A L M+ G P+
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
+Y +I G I ++E+ L EE++ +GL PN + Y +ID K G++V+ E +LR
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
EM V P+ + YT +I G+ + GNV+ A +L +EM++K IVPD ++Y ++G K G
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
++EA K DE Y A+I G
Sbjct: 800 GVLEAFK----------GSDEENYAAIIEG 819
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 1/270 (0%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
++S G+ ++ + N + C N + A R+ +E +G + N S+ V+ LC
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADN-AERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
A + +M P +ISG C+ G+ K L+L + KG + N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
++ LC+ G++ EA R+ +E+ G D V Y TLISG C + A DEM ++
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
+ PD +Y+ ++ GL + K+ EA + + + G+ PD TY+ +I G CKA E
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++M+ K + PN V Y L+ C+ G
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 150/270 (55%), Gaps = 10/270 (3%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
L++YG VV+ C T L N K A ++ N + Y+ V+ SLC+
Sbjct: 218 LVTYGAVVN-GLCKRGDTDLALNLLNKMEAAKI---------EANVVIYSTVIDSLCKYR 267
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
+A NL +ME G P+V++Y +IS C G+ +L+ ++ + + PN ++
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 327
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+ID K G++V+AE++ EM K + P+ Y++LI+GFC + A ++ + M +K
Sbjct: 328 ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK 387
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
+P+ V+Y ++++G CK ++ + +LF EM GL + VTYT LI+G +A + A
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 447
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ QMV G+ PN++TY IL+DGLCK G
Sbjct: 448 QMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 138/239 (57%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + E+G +T+++ ++H L K EA L+ +M G PD+V+YG +++
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G + L L+ +++ + N +Y+ +ID LCK +A + EM GV P
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + Y++LIS C G S A +L +M ++KI P+ V++++++ K GK+V+A KL+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EM+ ++P+ TY++LI G C + EA + M++K PNVVTY L++G CK
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 140/241 (58%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +F E GV N ++Y+ ++ LC G+ +A LL M P++V++ +I
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + G+L K KL EE+ ++ + PN + Y+++I+ C + EA+++L M + P
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V Y TLI+GFCK+ V +LF EM Q+ +V + V+YT+++HG + A +F
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+M+ +G+ P+ +TY L+ G CK G++ +A + + + + P++ TY I+++G+CK
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Query: 474 G 474
G
Sbjct: 512 G 512
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 129/237 (54%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + G + ++Y V++ LC+ G A NLL +ME +VV Y +I
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C+ + L L E++ KG+RPN Y+++I LC G +A R+L +M + + P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V ++ LI F K G + A KL++EM ++ I P+ +Y+S+++G C + ++ EA ++
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
M+ P+ VTY LI G CKA + + + +M Q+GL N VTYT L+ G
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 131/229 (57%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
++G + ++ N +L+ C ++ +A L+ QM G PD V++ +I G +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ + L++ + ++G +P+ Y +++ LCK G+ A +L +M + + V+Y+T+I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
CK + A LF EM+ K + P+ ++Y+S++ LC G+ +A +L S+M+ +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
P+ VT++ALI K G++ +A ++ +M+++ + PN+ TY+ L++G C
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 133/238 (55%), Gaps = 1/238 (0%)
Query: 238 FREYPEV-GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
F E E+ G+S N +YNI+++ C+ ++ A LL +M G PD+V+ +++G+C
Sbjct: 100 FGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 159
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
++ + L++++ G +P+ + +I L + + EA ++ M + G PD V
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV 219
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
Y +++G CK G+ A L ++M+ KI + V Y++++ LCK +A LF+EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G+ P+ +TY++LI C G +A + + M+++ + PN+VT++ L+D K+G
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKG 337
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 132/239 (55%), Gaps = 1/239 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + G+ +V + + ++ LC N+ A R+ + E ++ N ++++ ++ +
Sbjct: 276 FTEMENKGVRPNVITYSSLISCLC-NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFV 334
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK+ +A L +M P++ +Y +I+G+C + +L + +++E + RK PN
Sbjct: 335 KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I+ CK V + + REM++ G+ + V YTTLI GF ++ + A +F +M
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
+ P+ ++Y +L GLCK GK+ +A +F + +EPD TY +I G CKAG+
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 105/190 (55%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P ++ + ++S ++ + + V+ E+++ G+ N Y YN +I+ C+ + A +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
L +M K G PD V +L++GFC +S A L D+M + PD V++T+++HGL
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
K EA L M+ G +PD VTY A++ G CK G+ A ++ N+M + NVV
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 463 YTILVDGLCK 472
Y+ ++D LCK
Sbjct: 256 YSTVIDSLCK 265
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 122/236 (51%), Gaps = 6/236 (2%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R +P + + ++ +L ++ ++ K + +ME G ++ +Y ++I+ +C+
Sbjct: 73 RPFPSI------IEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRC 126
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
+L L L+ ++ + G P+ N++++ C + +A ++ +M + G PD V +
Sbjct: 127 SRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTF 186
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
TTLI G S A L D M Q+ PD V+Y ++++GLCK G A L ++M
Sbjct: 187 TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+E + V Y+ +I CK +A ++ +M KG+ PNV+TY+ L+ LC G
Sbjct: 247 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%)
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
Y Y ++ + E+ +A + M + FP + ++ L+S K +
Sbjct: 43 SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 102
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
+M+ I + +Y +++ C+ ++ A L +M+ +G EPD VT +L+ G C
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ +A ++ +QMV+ G P+ VT+T L+ GL
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGL 193
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 143/243 (58%), Gaps = 4/243 (1%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
G A+ +F + E+G++ +++N +++ LC G+V EA L+ +M G DVV+YG
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
I++G C++G + L L+ +++ ++P+ +Y+ IID LCK+G +A+ + EM +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G+ P+ Y +I GFC G S A +L +M +++I PD +++ +++ K GK+ EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
KL EML + PD VTY ++IYG CK +A + + M +P+VVT+ ++D
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDV 441
Query: 470 LCK 472
C+
Sbjct: 442 YCR 444
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 126/226 (55%), Gaps = 4/226 (1%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+T++YN +++ C+ + +A ++ M PDVV++ II YC+ ++++ ++L+
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
E+ R+GL N YN +I C+ + A+ + +EM HGV PD + L+ GFC++
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
+ A +LF+ ++ KI D V+Y ++HG+CK K+ EA LF + + G+EPD TY
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+I G C + +A + ++M G P+ TY L+ G K G
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
AI ++R+ + N S+NI++ C K+ + + ++ G PDVV++ ++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 294 GYC----------------QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
G C + G LE V L +++ GL P +N +I+ LC G V+
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAV-ALFDQMVEIGLTPVVITFNTLINGLCLEGRVL 243
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
EA ++ +M G+ D V Y T+++G CK G+ +A L +M++ I PD V Y++++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
LCK G +A LFSEML G+ P+ TY +I G C G +A + M+++ +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 458 PNVVTYTILVDGLCKRG 474
P+V+T+ L+ K G
Sbjct: 364 PDVLTFNALISASVKEG 380
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 1/214 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+++ RE G+ NT +YN ++H C++ + A +L +M G PD ++ +++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
G+C+ +LE+ L+L E +Q + + YN II +CK +V EA + + HGV
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD Y +ISGFC +S A+ LF +MK PD +Y +++ G K G++ ++ +L
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFS 446
SEM G D T ++ G + ++FS
Sbjct: 630 ISEMRSNGFSGDAFT-IKMVADLITDGRLDKSFS 662
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 15/242 (6%)
Query: 248 WNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKL 307
+ + N V+ ++ + A +L +ME ++ S+ ++I +C +L L
Sbjct: 104 YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLST 163
Query: 308 MEELQRKGLRPNEYVYNNIIDLLCKNGEV---------------VEAERVLREMTKHGVF 352
+L + G +P+ +N ++ LC + +EA + +M + G+
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P + + TLI+G C G V A L ++M K + D V+Y ++++G+CK+G A L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
S+M ++PD V Y+A+I CK G +A + ++M++KG+ PNV TY ++DG C
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 473 RG 474
G
Sbjct: 344 FG 345
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F +++S+G+ +CN+ L C N E + A+ +F + +T++YNI++H +C
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCEN-EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ KV EA +L + G PDV +Y V+ISG+C + L +++ G P+
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
YN +I K GE+ ++ ++ EM +G D
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 143/243 (58%), Gaps = 4/243 (1%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
G A+ +F + E+G++ +++N +++ LC G+V EA L+ +M G DVV+YG
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
I++G C++G + L L+ +++ ++P+ +Y+ IID LCK+G +A+ + EM +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G+ P+ Y +I GFC G S A +L +M +++I PD +++ +++ K GK+ EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
KL EML + PD VTY ++IYG CK +A + + M +P+VVT+ ++D
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDV 441
Query: 470 LCK 472
C+
Sbjct: 442 YCR 444
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 126/226 (55%), Gaps = 4/226 (1%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+T++YN +++ C+ + +A ++ M PDVV++ II YC+ ++++ ++L+
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
E+ R+GL N YN +I C+ + A+ + +EM HGV PD + L+ GFC++
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
+ A +LF+ ++ KI D V+Y ++HG+CK K+ EA LF + + G+EPD TY
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+I G C + +A + ++M G P+ TY L+ G K G
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
AI ++R+ + N S+NI++ C K+ + + ++ G PDVV++ ++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 294 GYC----------------QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
G C + G LE V L +++ GL P +N +I+ LC G V+
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAV-ALFDQMVEIGLTPVVITFNTLINGLCLEGRVL 243
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
EA ++ +M G+ D V Y T+++G CK G+ +A L +M++ I PD V Y++++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
LCK G +A LFSEML G+ P+ TY +I G C G +A + M+++ +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 458 PNVVTYTILVDGLCKRG 474
P+V+T+ L+ K G
Sbjct: 364 PDVLTFNALISASVKEG 380
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+++ RE G+ NT +YN ++H C++ + A +L +M G PD ++ +++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
G+C+ +LE+ L+L E +Q + + YN II +CK +V EA + + HGV
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD Y +ISGFC +S A+ LF +MK PD +Y +++ G K G++ ++ +L
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 413 FSEMLVMGLEPDEVT 427
SEM G D T
Sbjct: 630 ISEMRSNGFSGDAFT 644
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 15/242 (6%)
Query: 248 WNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKL 307
+ + N V+ ++ + A +L +ME ++ S+ ++I +C +L L
Sbjct: 104 YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLST 163
Query: 308 MEELQRKGLRPNEYVYNNIIDLLCKNGEV---------------VEAERVLREMTKHGVF 352
+L + G +P+ +N ++ LC + +EA + +M + G+
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P + + TLI+G C G V A L ++M K + D V+Y ++++G+CK+G A L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
S+M ++PD V Y+A+I CK G +A + ++M++KG+ PNV TY ++DG C
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 473 RG 474
G
Sbjct: 344 FG 345
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F +++S+G+ +CN+ L C N E + A+ +F + +T++YNI++H +C
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCEN-EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ KV EA +L + G PDV +Y V+ISG+C + L +++ G P+
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
YN +I K GE+ ++ ++ EM +G D
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 12/267 (4%)
Query: 138 DLKMAQTLVFEFWATPRLD-VHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXX 196
D ++++ F R D H+FD + T+ + DV+ +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN------TIIDVYCRAKRVDEGMQ 453
Query: 197 XXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIV 256
++ G+V + + N + C + A +F+E GV +T++ NI+
Sbjct: 454 L----LREISRRGLVANTTTYNTLIHGFC-EVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 257 LHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL 316
L+ C+ K++EA L ++ D V+Y +II G C+ ++++ L L G+
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
P+ YN +I C + +A + +M +G PDN Y TLI G K+G + + +
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKI 403
L EM+ D + +C++
Sbjct: 629 LISEMRSNGFSGDAFTIKMAEEIICRV 655
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 139/245 (56%), Gaps = 2/245 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A++V GV N + N + + ++++A L +M+ G VP+VV+Y +
Sbjct: 259 RDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCM 318
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK-HG 350
I GYC + ++E+ ++L+E++ KG P++ Y I+ LCK +VE ++++M K HG
Sbjct: 319 IRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHG 378
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ PD V Y TLI K + A + ++K D + Y++++H LCK G+M EA
Sbjct: 379 LVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438
Query: 411 KLFSEMLVMG-LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
L +EML G PD VTYTA++ G C+ GE+ +A + M G PN V+YT L++G
Sbjct: 439 DLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNG 498
Query: 470 LCKRG 474
+C+ G
Sbjct: 499 MCRTG 503
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 135/242 (55%), Gaps = 1/242 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP-DVVSYGVII 292
A+ ++ E G + + Y+ ++H+LC+ G++ EA +L+ +M G+ P DVV+Y ++
Sbjct: 402 ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVV 461
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+G+C++G+++K KL++ + G +PN Y +++ +C+ G+ +EA ++ +H
Sbjct: 462 NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS 521
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+++ Y+ ++ G + G +S A + EM K P V +L LC+ G+ EA K
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
E L G + V +T +I+G C+ E+ A S+ + M +V TYT LVD L K
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGK 641
Query: 473 RG 474
+G
Sbjct: 642 KG 643
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 37/263 (14%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ M Y +L L + + + +L+ M+ G ++ ++ Y + GQL LK++
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+QR G+ PN + N ID+ + + +A R L M G+ P+ V Y +I G+C
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVM-GLEPDEVT 427
V A +L ++M K +PD VSY +++ LCK ++VE L +M GL PD+VT
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 428 -----------------------------------YTALIYGHCKAGEMREAFSIHNQMV 452
Y+A+++ CK G M EA + N+M+
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 453 QKG-LTPNVVTYTILVDGLCKRG 474
KG P+VVTYT +V+G C+ G
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLG 468
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A V RE G + N++L SLC+ G+ EA + + G +VV+
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
+ +I G+CQ +L+ L +++++ + + Y ++D L K G + EA ++++M
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
G+ P V Y T+I +C+ G V + ++M ++ Y ++ LC +GK+
Sbjct: 657 HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLE 714
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
EA L ++L D T AL+ G+ K G A+ + +M + L P+V
Sbjct: 715 EADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDV 767
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 113/243 (46%), Gaps = 5/243 (2%)
Query: 179 PLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVF 238
P+ ++ Q + L+ G ++V + + C N E A+ V
Sbjct: 559 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA-ALSVL 617
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
+ + + +Y ++ +L + G++ EA L+ +M G P V+Y +I YCQ+
Sbjct: 618 DDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQM 677
Query: 299 GQLEKVLKLMEEL-QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVV 357
G+++ ++ ++E++ R+ R +YN +I+ LC G++ EA+ +L ++ + D
Sbjct: 678 GKVDDLVAILEKMISRQKCRT---IYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKT 734
Query: 358 YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML 417
L+ G+ K G +A+K+ M + ++PD + L GK+ EA KL ++
Sbjct: 735 CYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLV 794
Query: 418 VMG 420
G
Sbjct: 795 ERG 797
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 79/156 (50%)
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
R + VY +++++L K + RVL M + G++ ++ ++ + ++G + A K
Sbjct: 204 RHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+ M++ + P+ + + + + ++ +A + M V+G+ P+ VTY +I G+C
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ EA + M KG P+ V+Y ++ LCK
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCK 359
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 141/262 (53%), Gaps = 3/262 (1%)
Query: 214 VDSCNLFLTRLCGNFEGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNL 272
V + N+ + RLC EGKK A+ E + G+ N +SY ++ + C+ + A L
Sbjct: 345 VATYNILINRLCK--EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 273 LMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK 332
L+QM G PD+V+YG++I G G ++ + + +L +G+ P+ +YN ++ LCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 333 NGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS 392
G + A+ + EM + PD VY TLI GF +SG+ A K+F +K + D V
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 393 YTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMV 452
+ +M+ G C+ G + EA + M L PD+ TY+ +I G+ K +M A I M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 453 QKGLTPNVVTYTILVDGLCKRG 474
+ PNVVTYT L++G C +G
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQG 604
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 143/303 (47%), Gaps = 38/303 (12%)
Query: 208 YGIVVSVDSCNLFLTRLCGNFE-GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV 266
Y V V +CN L+ L + G R +V+ E + G S + S I++ +C GKV
Sbjct: 164 YDSVPDVIACNSLLSLLVKSRRLGDAR--KVYDEMCDRGDSVDNYSTCILVKGMCNEGKV 221
Query: 267 KEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI 326
+ L+ G +P++V Y II GYC++G +E + +EL+ KG P + +
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281
Query: 327 IDLLCKNGEVVEAERVLREMTKHGVF---------------------------------- 352
I+ CK G+ V ++R+L E+ + G+
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341
Query: 353 -PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD Y LI+ CK G A DE +K ++P+ +SY ++ CK + A K
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
L +M G +PD VTY LI+G +G M +A ++ +++ +G++P+ Y +L+ GLC
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 472 KRG 474
K G
Sbjct: 462 KTG 464
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N + YN ++ C+LG ++ A+ + +++ G +P + ++G +I+G+C+ G +L+
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 309 EELQRKGLRPNEYVYNNIIDL-----------------------------------LCKN 333
E++ +GLR + + NNIID LCK
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 334 GEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSY 393
G+ A L E +K G+ P+N+ Y LI +CKS A KL +M ++ PD V+Y
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 394 TSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
++HGL G M +A + +++ G+ PD Y L+ G CK G A + ++M+
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 454 KGLTPNVVTYTILVDGLCKRG 474
+ + P+ Y L+DG + G
Sbjct: 479 RNILPDAYVYATLIDGFIRSG 499
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 105/192 (54%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
PDV +Y ++I+ C+ G+ E + ++E +KGL PN Y +I CK+ E A ++
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
L +M + G PD V Y LI G SG++ A + ++ + + PD Y ++ GLCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
G+ + A LFSEML + PD Y LI G ++G+ EA + + V+KG+ +VV
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 463 YTILVDGLCKRG 474
+ ++ G C+ G
Sbjct: 523 HNAMIKGFCRSG 534
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
GVS + YN+++ LC+ G+ A L +M +PD Y +I G+ + G ++
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
K+ KG++ + +N +I C++G + EA + M + + PD Y+T+I G
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+ K +++ A K+F M++ K P+ V+YTS+++G C G A + F EM + L P+
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 425 EVTYTALIYGHCK-AGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
VTYT LI K + + +A M+ PN VT+ L+ G K+
Sbjct: 625 VVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 139/323 (43%), Gaps = 55/323 (17%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
KL+ G+ N+ ++ LC G F K +F E + + + Y ++
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL---LFSEMLDRNILPDAYVYATLIDGFI 496
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ G EA + G DVV + +I G+C+ G L++ L M + + L P+++
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y+ IID K ++ A ++ R M K+ P+ V YT+LI+GFC G+ A + F EM
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE-MLVMGLEPDEVTYTALIYGH----- 435
+ + +VP+ V+YT+++ L K +E + E M+ P+EVT+ L+ G
Sbjct: 617 QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 436 --------------------------------------------CKAGEMREAFSIHNQM 451
C G ++ A ++M
Sbjct: 677 GKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKM 736
Query: 452 VQKGLTPNVVTYTILVDGLCKRG 474
V+KG +P+ V++ ++ G C G
Sbjct: 737 VKKGFSPDPVSFAAILHGFCVVG 759
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 225 CGNFEGKKRAIRVFREYPEV-------GVSWNTMSYNIVLHSLCQLGKVKEAHNLL-MQM 276
C +F R+F E +V V + + VLH+ + G + +A + +
Sbjct: 102 CSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVV 161
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
E +VPDV++ ++S + +L K+ +E+ +G + Y ++ +C G+V
Sbjct: 162 ELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKV 221
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
+++ G P+ V Y T+I G+CK G++ A+ +F E+K K +P ++ +M
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGL----------------------------------- 421
++G CK G V + +L SE+ GL
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+PD TY LI CK G+ A ++ +KGL PN ++Y L+ CK
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 291 IISGYCQIGQLEKVLKLMEEL-QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
++ Y + G L K +++ + + + P+ N+++ LL K+ + +A +V EM
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G DN L+ G C G V KL + K +P+ V Y +++ G CK+G + A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL------------- 456
+ +F E+ + G P T+ +I G CK G+ + + +++ ++GL
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 457 ----------------------TPNVVTYTILVDGLCKRG 474
P+V TY IL++ LCK G
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEG 359
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 53/268 (19%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
G+F+ A +VF E GV + + +N ++ C+ G + EA + +M VPD
Sbjct: 499 GDFD---EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
+Y II GY + + +K+ +++ +PN Y ++I+ C G+ AE +E
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615
Query: 346 MTKHGVFPDNVVYTTLISGFCK-SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK-- 402
M + P+ V YTTLI K S + A ++ M K VP+ V++ +L G K
Sbjct: 616 MQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKT 675
Query: 403 IGKMVE--------AHKLFSE--------------------------------------- 415
GK++ LFSE
Sbjct: 676 SGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDK 735
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMRE 443
M+ G PD V++ A+++G C G ++
Sbjct: 736 MVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
K+ + ++ N + ++ + LL + E E VL + V + + ++
Sbjct: 82 KLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVL 141
Query: 363 SGFCKSGNVSAAHKLFDEMKQ-KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
+ +SG++S A +++D + + VPD ++ S+L L K ++ +A K++ EM G
Sbjct: 142 HAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGD 201
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
D + L+ G C G++ + KG PN+V Y ++ G CK G
Sbjct: 202 SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLG 254
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 138/238 (57%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I +FR +G+S + S+ ++ C+ ++ A + L +M G P +V++G +++G
Sbjct: 99 ISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNG 158
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
+C + + + + L++++ G PN +YN IID LC+ G+V A VL+ M K G+ PD
Sbjct: 159 FCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPD 218
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y +LI+ SG + ++ +M + I PD +++++++ K G+++EA K ++
Sbjct: 219 VVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYN 278
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EM+ + P+ VTY +LI G C G + EA + N +V KG PN VTY L++G CK
Sbjct: 279 EMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 135/241 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + +G N + YN ++ SLC+ G+V A ++L M+ G PDVV+Y +I+
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G +++ ++ R G+ P+ ++ +ID+ K G+++EA++ EM + V P
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V Y +LI+G C G + A K+ + + K P+ V+Y ++++G CK ++ + K+
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
M G++ D TY L G+C+AG+ A + +MV G+ P++ T+ IL+DGLC
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 474 G 474
G
Sbjct: 408 G 408
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 134/241 (55%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + ++G + +++ +++ C + + EA +L+ Q+ G P+VV Y II
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID 192
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C+ GQ+ L +++ +++ G+RP+ YN++I L +G + R+L +M + G+ P
Sbjct: 193 SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISP 252
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D + ++ LI + K G + A K ++EM Q+ + P+ V+Y S+++GLC G + EA K+
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL 312
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ ++ G P+ VTY LI G+CKA + + I M + G+ + TY L G C+
Sbjct: 313 NVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQA 372
Query: 474 G 474
G
Sbjct: 373 G 373
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 126/239 (52%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V + ++G+ + ++YN ++ L G + +L M G PDV+++ +I
Sbjct: 203 ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Y + GQL + K E+ ++ + PN YN++I+ LC +G + EA++VL + G FP
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V Y TLI+G+CK+ V K+ M + + D +Y ++ G C+ GK A K+
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
M+ G+ PD T+ L+ G C G++ +A + + ++TY I++ GLCK
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 131/241 (54%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +F + E + + ++ +L ++ +L K + +L +E G D+ S+ +I
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+C+ +L L + ++ + G P+ + ++++ C EA ++ ++ G P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V+Y T+I C+ G V+ A + MK+ I PD V+Y S++ L G + ++
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
S+M+ MG+ PD +T++ALI + K G++ EA +N+M+Q+ + PN+VTY L++GLC
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 474 G 474
G
Sbjct: 303 G 303
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 124/232 (53%), Gaps = 5/232 (2%)
Query: 228 FEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
E KK+ + E + V+ N ++YN +++ LC G + EA +L + G P+ V+
Sbjct: 271 LEAKKQ----YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I+GYC+ +++ +K++ + R G+ + + YN + C+ G+ AE+VL M
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV 386
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
GV PD + L+ G C G + A +++++ K V ++Y ++ GLCK K+
Sbjct: 387 SCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVE 446
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTP 458
+A LF + + G+ PD +TY ++ G + REA ++ +M ++ GL P
Sbjct: 447 DAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 132/239 (55%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + E+G +T ++ ++H L K EA L+ QM G PD+V+YG +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G ++ L L+ +++ ++ N ++N IID LCK V A + EM G+ P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V Y +LI+ C G S A +L M +KKI P+ V++ +++ K GK+VEA KL
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EM+ ++PD +TY LI G C + EA + MV K PN+ TY L++G CK
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 133/241 (55%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + + N + +N ++ SLC+ V+ A +L +ME G P+VV+Y +I+
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C G+ +L+ + K + PN +N +ID K G++VEAE++ EM + + P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D + Y LI+GFC + A ++F M K +P+ +Y ++++G CK ++ + +LF
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM GL + VTYT +I G +AG+ A + QMV + +++TY+IL+ GLC
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 474 G 474
G
Sbjct: 482 G 482
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 129/242 (53%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A+ + + + G + ++Y V++ LC+ G + A NLL +ME +VV + II
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
C+ +E + L E++ KG+RPN YN++I+ LC G +A R+L M + +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+ V + LI F K G + A KL +EM Q+ I PD ++Y +++G C ++ EA ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
F M+ P+ TY LI G CK + + + +M Q+GL N VTYT ++ G +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 473 RG 474
G
Sbjct: 446 AG 447
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 148/272 (54%), Gaps = 4/272 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + GI +V + N + LC N+ A R+ E ++ N +++N ++ +
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLC-NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GK+ EA L +M PD ++Y ++I+G+C +L++ ++ + + K PN
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I+ CK V + + REM++ G+ + V YTT+I GF ++G+ +A +F +M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
++ D ++Y+ +LHGLC GK+ A +F + +E + Y +I G CKAG++
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EA+ + + + P+VVTY ++ GLC +
Sbjct: 520 GEAWDLFCSL---SIKPDVVTYNTMISGLCSK 548
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 134/238 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V + ++G + ++ + +L+ C ++ +A L+ QM G PD ++ +I
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G + + + L++++ ++G +P+ Y +++ LCK G++ A +L +M +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V++ T+I CK +V A LF EM+ K I P+ V+Y S+++ LC G+ +A +L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
S ML + P+ VT+ ALI K G++ EA +H +M+Q+ + P+ +TY +L++G C
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 137/257 (53%), Gaps = 1/257 (0%)
Query: 218 NLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
N + LC + + A+ +F E G+ N ++YN +++ LC G+ +A LL M
Sbjct: 262 NTIIDSLC-KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
P+VV++ +I + + G+L + KL EE+ ++ + P+ YN +I+ C + +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
EA+++ + M P+ Y TLI+GFCK V +LF EM Q+ +V + V+YT+++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
G + G A +F +M+ + D +TY+ L++G C G++ A I + + +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 458 PNVVTYTILVDGLCKRG 474
N+ Y +++G+CK G
Sbjct: 501 LNIFIYNTMIEGMCKAG 517
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 132/240 (55%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I + + +G+S + +Y+I ++ C+ ++ A +L +M G PD+V+ +++G
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG 162
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
YC ++ + L++++ G +P+ + + +I L + + EA ++ +M + G PD
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y T+++G CK G++ A L ++M+ +I + V + +++ LCK + A LF+
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFT 282
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
EM G+ P+ VTY +LI C G +A + + M++K + PNVVT+ L+D K G
Sbjct: 283 EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEG 342
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 119/218 (54%)
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
I+ + L + KV +A +L M P +V + ++S ++ + E V+ L E++Q
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
G+ + Y Y+ I+ C+ ++ A VL +M K G PD V ++L++G+C S +S A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
L D+M + PD ++T+++HGL K EA L +M+ G +PD VTY ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 435 HCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
CK G++ A ++ N+M + NVV + ++D LCK
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK A ++ E + + +T++YN++++ C ++ EA + M +P++ +
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I+G+C+ ++E ++L E+ ++GL N Y II + G+ A+ V ++M
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 348 KHGVFPD----------------------------------NV-VYTTLISGFCKSGNVS 372
+ V D N+ +Y T+I G CK+G V
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A LF + K PD V+Y +M+ GLC + EA LF +M G P+ TY LI
Sbjct: 521 EAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ + + + + +M G + T +++ + L
Sbjct: 578 RANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 37/201 (18%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP-DVVSYGVII 292
+ +FRE + G+ NT++Y ++ Q G A + QM VP D+++Y +++
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM-VSNRVPTDIMTYSILL 475
Query: 293 SGYCQIGQLEKVLKLMEELQRK--------------------------------GLRPNE 320
G C G+L+ L + + LQ+ ++P+
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDV 535
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
YN +I LC + EA+ + R+M + G P++ Y TLI + + +A+ +L E
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595
Query: 381 MKQKKIVPDFVS---YTSMLH 398
M+ V D + T+MLH
Sbjct: 596 MRSSGFVGDASTISLVTNMLH 616
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 149/259 (57%), Gaps = 4/259 (1%)
Query: 218 NLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
N+ + LCG + +K A+ + G + ++YN ++ C+ ++ +A + ++
Sbjct: 210 NILIRGLCGVGKAEK-ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 278 FCGNV--PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGE 335
G+V PDVV+Y +ISGYC+ G++ + L++++ R G+ P +N ++D K GE
Sbjct: 269 -SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 336 VVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
++ AE + +M G FPD V +T+LI G+C+ G VS +L++EM + + P+ +Y+
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
+++ LC ++++A +L ++ + P Y +I G CKAG++ EA I +M +K
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 456 LTPNVVTYTILVDGLCKRG 474
P+ +T+TIL+ G C +G
Sbjct: 448 CKPDKITFTILIIGHCMKG 466
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 141/233 (60%), Gaps = 2/233 (0%)
Query: 230 GKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
GK R A + + +G+ +++N+++ + G++ A + +M G PDVV++
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+I GYC++GQ+ + +L EE+ +G+ PN + Y+ +I+ LC +++A +L ++
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
+ P +Y +I GFCK+G V+ A+ + +EM++KK PD +++T ++ G C G+M E
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
A +F +M+ +G PD++T ++L+ KAG +EA+ + NQ+ +KG + NVV
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 134/245 (54%), Gaps = 9/245 (3%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQ---MEFCGNVPDVVSYGV 290
A ++F GVS N ++ S + GK+ A LL+Q +E C V +
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVN-----S 176
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+++ ++ ++E +KL +E R + +N +I LC G+ +A +L M+ G
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV-PDFVSYTSMLHGLCKIGKMVEA 409
PD V Y TLI GFCKS ++ A ++F ++K + PD V+YTSM+ G CK GKM EA
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
L +ML +G+ P VT+ L+ G+ KAGEM A I +M+ G P+VVT+T L+DG
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 470 LCKRG 474
C+ G
Sbjct: 357 YCRVG 361
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 5/190 (2%)
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+Y ++ C+ G + ++ E ++ G+ PN + ++ + G++ A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
V +V +L++ K V A KLFDE + + D ++ ++ GLC +GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG--LTPNVVTYT 464
+A +L M G EPD VTY LI G CK+ E+ +A + V+ G +P+VVTYT
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYT 281
Query: 465 ILVDGLCKRG 474
++ G CK G
Sbjct: 282 SMISGYCKAG 291
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 149/259 (57%), Gaps = 4/259 (1%)
Query: 218 NLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
N+ + LCG + +K A+ + G + ++YN ++ C+ ++ +A + ++
Sbjct: 210 NILIRGLCGVGKAEK-ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 278 FCGNV--PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGE 335
G+V PDVV+Y +ISGYC+ G++ + L++++ R G+ P +N ++D K GE
Sbjct: 269 -SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 336 VVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
++ AE + +M G FPD V +T+LI G+C+ G VS +L++EM + + P+ +Y+
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
+++ LC ++++A +L ++ + P Y +I G CKAG++ EA I +M +K
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 456 LTPNVVTYTILVDGLCKRG 474
P+ +T+TIL+ G C +G
Sbjct: 448 CKPDKITFTILIIGHCMKG 466
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 141/233 (60%), Gaps = 2/233 (0%)
Query: 230 GKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
GK R A + + +G+ +++N+++ + G++ A + +M G PDVV++
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+I GYC++GQ+ + +L EE+ +G+ PN + Y+ +I+ LC +++A +L ++
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
+ P +Y +I GFCK+G V+ A+ + +EM++KK PD +++T ++ G C G+M E
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
A +F +M+ +G PD++T ++L+ KAG +EA+ + NQ+ +KG + NVV
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 134/245 (54%), Gaps = 9/245 (3%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQ---MEFCGNVPDVVSYGV 290
A ++F GVS N ++ S + GK+ A LL+Q +E C V +
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVN-----S 176
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+++ ++ ++E +KL +E R + +N +I LC G+ +A +L M+ G
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV-PDFVSYTSMLHGLCKIGKMVEA 409
PD V Y TLI GFCKS ++ A ++F ++K + PD V+YTSM+ G CK GKM EA
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
L +ML +G+ P VT+ L+ G+ KAGEM A I +M+ G P+VVT+T L+DG
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 470 LCKRG 474
C+ G
Sbjct: 357 YCRVG 361
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 5/190 (2%)
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+Y ++ C+ G + ++ E ++ G+ PN + ++ + G++ A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
V +V +L++ K V A KLFDE + + D ++ ++ GLC +GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG--LTPNVVTYT 464
+A +L M G EPD VTY LI G CK+ E+ +A + V+ G +P+VVTYT
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYT 281
Query: 465 ILVDGLCKRG 474
++ G CK G
Sbjct: 282 SMISGYCKAG 291
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 148/256 (57%), Gaps = 2/256 (0%)
Query: 216 SCNLFLTRLCGNF-EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLL 273
SC + + + G F EG+ A+ + E G+S N ++Y +++ LC+ ++ +A +
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 274 MQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKN 333
+M+ G D+ +YG +I G+C+ +E L EL +GL P++ +YN++I
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNL 702
Query: 334 GEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSY 393
G +V A + ++M K G+ D YTTLI G K GN+ A +L+ EM+ +VPD + Y
Sbjct: 703 GNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIY 762
Query: 394 TSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
T +++GL K G+ V+ K+F EM + P+ + Y A+I GH + G + EAF +H++M+
Sbjct: 763 TVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLD 822
Query: 454 KGLTPNVVTYTILVDG 469
KG+ P+ T+ ILV G
Sbjct: 823 KGILPDGATFDILVSG 838
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 142/255 (55%), Gaps = 4/255 (1%)
Query: 222 TRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
T + G +G+K A+++F E E G++ N N +L LC+ GK EA LL +ME
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESR 472
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G P+VVSY ++ G+C+ ++ + + KGL+PN Y Y+ +ID +N + A
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM-KQKKIVPDFVSYTSMLH 398
V+ MT + + VVY T+I+G CK G S A +L M ++K++ +SY S++
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
G K G+M A + EM G+ P+ +TYT+L+ G CK M +A + ++M KG+
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL 652
Query: 459 NVVTYTILVDGLCKR 473
++ Y L+DG CKR
Sbjct: 653 DIPAYGALIDGFCKR 667
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 127/239 (53%), Gaps = 1/239 (0%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
VF E G+ N +Y+I++ + + A ++ M + V Y II+G C
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 297 QIGQLEKVLKLMEEL-QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
++GQ K +L+ + + K L + YN+IID K GE+ A EM +G+ P+
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
+ YT+L++G CK+ + A ++ DEMK K + D +Y +++ G CK M A LFSE
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE 679
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+L GL P + Y +LI G G M A ++ +M++ GL ++ TYT L+DGL K G
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
AIR+ E G+S N ++ ++ C+ + A L +ME G P+ V++ V+I
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + G++EK L+ ++++ GL P+ + + II K + EA ++ E + G
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LA 441
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V T++S CK G A +L +M+ + I P+ VSY +++ G C+ M A +F
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
S +L GL+P+ TY+ LI G + + + A + N M + N V Y +++GLCK
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561
Query: 474 G 474
G
Sbjct: 562 G 562
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 178/387 (45%), Gaps = 9/387 (2%)
Query: 93 LIWVLINIKNDYVLVLDFFNWARSRRDK-PSLEALCIVLHIAVASNDL-KMAQTLVFEFW 150
+I VL+N +N+ L F+NWAR R + +++HI V+S + A L+ +
Sbjct: 75 VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYV 134
Query: 151 ATPRLDVHHLFDQFTERLIYTYKDWG--AHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSY 208
+T + + +L+ + K +G + F+ +++L
Sbjct: 135 STS--NPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLEL 192
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
++ N L+ L A ++ +GV + ++ +++ + + K E
Sbjct: 193 DVIPFFPYVNRTLSALVQR-NSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAE 251
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL-RPNEYVYNNII 327
A +L + G PD + Y + + C+ L L+ E++ K L P++ Y ++I
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
K G + +A R+ EM G+ + V T+LI+G CK+ ++ +A LFD+M+++
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
P+ V+++ ++ K G+M +A + + +M V+GL P +I G K + EA +
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ + GL NV ++ LCK+G
Sbjct: 432 FDESFETGLA-NVFVCNTILSWLCKQG 457
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 142/258 (55%), Gaps = 18/258 (6%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV-------- 285
A +F G N ++Y+ ++ C+ G+V++A + +M +VPDV
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 286 --------VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
V+YG ++ G+C+ ++E+ KL++ + +G PN+ VY+ +ID LCK G++
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 338 EAERVLREMTKHGVFPDNV-VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
EA+ V EM++HG FP + Y++LI + K A K+ +M + P+ V YT M
Sbjct: 692 EAQEVKTEMSEHG-FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
+ GLCK+GK EA+KL M G +P+ VTYTA+I G G++ + +M KG+
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 457 TPNVVTYTILVDGLCKRG 474
PN VTY +L+D CK G
Sbjct: 811 APNYVTYRVLIDHCCKNG 828
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 152/326 (46%), Gaps = 56/326 (17%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
+ ++L+ G+V++ + + F LC G +E +A V RE G +T +Y+ VL+
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYE---KAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
LC K++ A L +M+ G V DV +Y +++ +C+ G +E+ K E++ G PN
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
Y +I K +V A + M G P+ V Y+ LI G CK+G V A ++F+
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 380 EMKQKKIVPD----------------FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
M K VPD V+Y ++L G CK ++ EA KL M + G EP
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL--------------------------- 456
+++ Y ALI G CK G++ EA + +M + G
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 457 --------TPNVVTYTILVDGLCKRG 474
PNVV YT ++DGLCK G
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVG 758
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 134/263 (50%), Gaps = 8/263 (3%)
Query: 220 FLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
+ T LCG K+ R RV G + +N ++H+ C G A+ LL +M
Sbjct: 340 YSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Query: 278 FCGNVPDVVSYGVIISGYC------QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLC 331
CG++P V Y ++I C L+ K E+ G+ N+ ++ LC
Sbjct: 400 KCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC 459
Query: 332 KNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFV 391
G+ +A V+REM G PD Y+ +++ C + + A LF+EMK+ +V D
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519
Query: 392 SYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM 451
+YT M+ CK G + +A K F+EM +G P+ VTYTALI+ + KA ++ A + M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 452 VQKGLTPNVVTYTILVDGLCKRG 474
+ +G PN+VTY+ L+DG CK G
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAG 602
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 132/258 (51%), Gaps = 2/258 (0%)
Query: 216 SCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQ 275
+C +F R+CG+ + + F++Y + N ++Y +L C+ +V+EA LL
Sbjct: 607 ACQIF-ERMCGSKDVPDVDM-YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 276 MEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGE 335
M G P+ + Y +I G C++G+L++ ++ E+ G Y Y+++ID K
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 336 VVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
A +VL +M ++ P+ V+YT +I G CK G A+KL M++K P+ V+YT+
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
M+ G IGK+ +L M G+ P+ VTY LI CK G + A ++ +M Q
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Query: 456 LTPNVVTYTILVDGLCKR 473
+ Y +++G K
Sbjct: 845 WPTHTAGYRKVIEGFNKE 862
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 6/232 (2%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+T+ Y ++ LC+ +EA + L +M +P+VV+Y ++ G QL + +++
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL 360
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+ +G P+ ++N+++ C +G+ A ++L++M K G P VVY LI C
Sbjct: 361 NMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGD 420
Query: 369 GN------VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
+ + A K + EM +V + ++ +S LC GK +A + EM+ G
Sbjct: 421 KDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
PD TY+ ++ C A +M AF + +M + GL +V TYTI+VD CK G
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 122/240 (50%), Gaps = 6/240 (2%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +V + E + N + Y ++ LC++GK EA+ L+ ME G P+VV+Y +I
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+ IG++E L+L+E + KG+ PN Y +ID CKNG + A +L EM K +P
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWP 846
Query: 354 DNVV-YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
+ Y +I GF K S L DE+ Q P Y ++ L K ++ A +L
Sbjct: 847 THTAGYRKVIEGFNKEFIESLG--LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 904
Query: 413 FSEMLVMG--LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
E+ L TY +LI C A ++ AF + ++M +KG+ P + ++ L+ GL
Sbjct: 905 LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N+++ C+ G A L +++ P +Y +I + + +L+ + E+
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
LR + + LCK G+ EA L + PD V YT LISG C++
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A + M+ +P+ V+Y+++L G ++ ++ + M++ G P + +L++
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+C +G+ A+ + +MV+ G P V Y IL+ +C
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 3/185 (1%)
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
V++ +C+ G L+ + L+ RP+ YN +I K + A + REM+
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
+ D CK G A L ++ + VPD V YT ++ GLC+ EA
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ M P+ VTY+ L+ G ++ + N M+ +G P+ + LV
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 470 LCKRG 474
C G
Sbjct: 382 YCTSG 386
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 72/191 (37%), Gaps = 40/191 (20%)
Query: 315 GLRPNEYVYNNIIDLL-----------------------------------CKNGEVVEA 339
G + VYN ++DL+ C+NG A
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA 219
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
L + P Y LI F K+ + +A + EM + D + +
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 400 LCKIGKMVEAHKLF-SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
LCK+GK EA L +E V PD V YT LI G C+A EA N+M P
Sbjct: 280 LCKVGKWREALTLVETENFV----PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 459 NVVTYTILVDG 469
NVVTY+ L+ G
Sbjct: 336 NVVTYSTLLCG 346
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 52/214 (24%)
Query: 208 YGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
+G++ +++C L R+ G K GV+ N ++Y +++ C+ G +
Sbjct: 789 FGMIGKIETCLELLERM-----GSK------------GVAPNYVTYRVLIDHCCKNGALD 831
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYC-----------QIGQ---------------- 300
AHNLL +M+ Y +I G+ +IGQ
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDN 891
Query: 301 ------LEKVLKLMEELQRKGLRPNEY--VYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
LE L+L+EE+ +Y YN++I+ LC +V A ++ EMTK GV
Sbjct: 892 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKI 386
P+ + +LI G ++ +S A L D + +I
Sbjct: 952 PEMQSFCSLIKGLFRNSKISEALLLLDFISHMEI 985
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 152/268 (56%), Gaps = 5/268 (1%)
Query: 207 SYGIVVSVDSCNLFLT--RLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
S G+ ++V + N + + G+ EG R +R+ E GVS N ++Y ++ C+ G
Sbjct: 254 SLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER---GVSRNVVTYTSLIKGYCKKG 310
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
++EA ++ ++ V D YGV++ GYC+ GQ+ +++ + + G+R N + N
Sbjct: 311 LMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICN 370
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
++I+ CK+G++VEAE++ M + PD+ Y TL+ G+C++G V A KL D+M QK
Sbjct: 371 SLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK 430
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
++VP ++Y +L G +IG + L+ ML G+ DE++ + L+ K G+ EA
Sbjct: 431 EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEA 490
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ ++ +GL + +T +++ GLCK
Sbjct: 491 MKLWENVLARGLLTDTITLNVMISGLCK 518
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 208/420 (49%), Gaps = 18/420 (4%)
Query: 60 DLVRHVSTTIKRRRSEPLRRVLKPFESKLNPHHLIWVLINIKNDYVLVLDFFNWA-RSRR 118
+L+ VS + R E L + F +L L +L ++ + L+ FN A + ++
Sbjct: 44 ELLERVSRLLVLGRYEALHDLSLDFSDEL----LNSILRRLRLNPEACLEIFNLASKQQK 99
Query: 119 DKPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQFTERLIYTYKDWGAH 178
+P +A C ++HI + + + ++ + E A H F + E L+ +K++
Sbjct: 100 FRPDYKAYCKMVHILSRARNYQQTKSYLCELVALN----HSGFVVWGE-LVRVFKEFSFS 154
Query: 179 PLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVS---VDSCNLFLTRLCGNFEGKKRAI 235
P VFD+ + F + +YG + S +S L R NF A+
Sbjct: 155 PTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENF----VAL 210
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC-GNVPDVVSYGVIISG 294
V+ + VS + + +IV+++ C+ G V +A + E G +VV+Y +I+G
Sbjct: 211 HVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLING 270
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
Y IG +E + +++ + +G+ N Y ++I CK G + EAE V + + + D
Sbjct: 271 YAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVAD 330
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
+Y L+ G+C++G + A ++ D M + + + S+++G CK G++VEA ++FS
Sbjct: 331 QHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFS 390
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
M L+PD TY L+ G+C+AG + EA + +QM QK + P V+TY IL+ G + G
Sbjct: 391 RMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 132/276 (47%), Gaps = 40/276 (14%)
Query: 239 REYPE-VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQ 297
+EY E G+ YN ++ + + + +L++++ G P V +YG +I+G+C
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 298 IGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA------------------ 339
IG ++K E+ KG+ N + + I + L + ++ EA
Sbjct: 624 IGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ 683
Query: 340 --------------------ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF- 378
E V K + P+N+VY I+G CK+G + A KLF
Sbjct: 684 SLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFS 743
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
D + + +PD +YT ++HG G + +A L EM + G+ P+ VTY ALI G CK
Sbjct: 744 DLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKL 803
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G + A + +++ QKG+TPN +TY L+DGL K G
Sbjct: 804 GNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 129/241 (53%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+RV E+GV NT N +++ C+ G++ EA + +M PD +Y +
Sbjct: 348 RDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTL 407
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ GYC+ G +++ LKL +++ +K + P YN ++ + G + + + M K GV
Sbjct: 408 VDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGV 467
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
D + +TL+ K G+ + A KL++ + + ++ D ++ M+ GLCK+ K+ EA +
Sbjct: 468 NADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+ + + +P TY AL +G+ K G ++EAF++ M +KG+ P + Y L+ G
Sbjct: 528 ILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAF 587
Query: 472 K 472
K
Sbjct: 588 K 588
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 138/266 (51%), Gaps = 23/266 (8%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
+L + G+ +V + +T C N +A E E G++ N + + +SL +L
Sbjct: 601 ELRARGLTPTVATYGALITGWC-NIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRL 659
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQ-LE-------KVLKLMEELQ--- 312
K+ EA LL + +V + +++ GY + + LE K K+ E ++
Sbjct: 660 DKIDEACLLLQK---------IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENST 710
Query: 313 -RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF-PDNVVYTTLISGFCKSGN 370
+K L PN VYN I LCK G++ +A ++ ++ F PD YT LI G +G+
Sbjct: 711 PKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGD 770
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTA 430
++ A L DEM K I+P+ V+Y +++ GLCK+G + A +L ++ G+ P+ +TY
Sbjct: 771 INKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNT 830
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGL 456
LI G K+G + EA + +M++KGL
Sbjct: 831 LIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 36/291 (12%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
++ G+ + CN + C + + A ++F + + + +YN ++ C+ G
Sbjct: 357 MIEIGVRTNTTICNSLINGYCKSGQ-LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG 415
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
V EA L QM VP V++Y +++ GY +IG VL L + + ++G+ +E +
Sbjct: 416 YVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCS 475
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+++ L K G+ EA ++ + G+ D + +ISG CK V+ A ++ D +
Sbjct: 476 TLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIF 535
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEA----------------------------------- 409
+ P +Y ++ HG K+G + EA
Sbjct: 536 RCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKV 595
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
L E+ GL P TY ALI G C G + +A++ +M++KG+T NV
Sbjct: 596 ADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNV 646
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 145/346 (41%), Gaps = 79/346 (22%)
Query: 205 LLSYGIVVSVDSCNLFLTRL--CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
+L G+ SC+ L L G+F A++++ G+ +T++ N+++ LC+
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDF---NEAMKLWENVLARGLLTDTITLNVMISGLCK 518
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
+ KV EA +L + P V +Y + GY ++G L++ + E ++RKG+ P +
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM 578
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
YN +I K + + ++ E+ G+ P Y LI+G+C G + A+ EM
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS-----EMLVMG----------------- 420
+K I + + + + L ++ K+ EA L ++L+ G
Sbjct: 639 EKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLK 698
Query: 421 ----------------LEPDEVTYTALIYGHCKAGEMRE--------------------- 443
L P+ + Y I G CKAG++ +
Sbjct: 699 TQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTY 758
Query: 444 ---------------AFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
AF++ ++M KG+ PN+VTY L+ GLCK G
Sbjct: 759 TILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG 804
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN-VPDVVSYGVIISGYCQIGQLEKVLKL 307
N + YN+ + LC+ GK+++A L + +PD +Y ++I G G + K L
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 308 MEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCK 367
+E+ KG+ PN YN +I LCK G V A+R+L ++ + G+ P+ + Y TLI G K
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Query: 368 SGNVSAAHKLFDEMKQKKIV 387
SGNV+ A +L ++M +K +V
Sbjct: 838 SGNVAEAMRLKEKMIEKGLV 857
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 144/242 (59%), Gaps = 1/242 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+ R E G +S N VL L + +++ A LL + CG P+VV++ +I
Sbjct: 235 KALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLI 293
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+G+C+ G++++ L + ++++G+ P+ Y+ +ID K G + ++ + GV
Sbjct: 294 NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
D VV+++ I + KSG+++ A ++ M + I P+ V+YT ++ GLC+ G++ EA +
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ ++L G+EP VTY++LI G CK G +R F+++ M++ G P+VV Y +LVDGL K
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 473 RG 474
+G
Sbjct: 474 QG 475
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 150/297 (50%), Gaps = 8/297 (2%)
Query: 177 AHPLVFDVFFQXXXXXXXXXXXXXXFHKL-LSYGIVVSVDSCNLFLTRLCGNFEGKKRAI 235
AH V D F FH+L + G V + SCN L L + + + A
Sbjct: 219 AHGFVLDALF-----CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL--SVDQIEVAS 271
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
R+ + G + N +++ +++ C+ G++ A +L ME G PD+++Y +I GY
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
+ G L KL + KG++ + V+++ ID+ K+G++ A V + M G+ P+
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
V YT LI G C+ G + A ++ ++ ++ + P V+Y+S++ G CK G + L+ +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
M+ MG PD V Y L+ G K G M A +M+ + + NVV + L+DG C+
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 120/214 (56%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
+S + N+V+H L + ++++A + PD+V+Y +I GYC + +L++
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
++ E L+ PN +I +LCKN ++ A R+ M + G P+ V Y L+ F
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
KS ++ + KLF+EM++K I P VSY+ ++ GLCK G++ EA +F + + L PD
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
V Y LI G+CK G + EA ++ M++ G+ P+
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 133/241 (55%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A++VFR G+ + ++ V+ G+++EA L +M G PD ++Y +I
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+C+ + L+L + +QR + + V N +I LL K + +A + + + + P
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V Y T+I G+C + A ++F+ +K P+ V+ T ++H LCK M A ++F
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
S M G +P+ VTY L+ K+ ++ +F + +M +KG++P++V+Y+I++DGLCKR
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 474 G 474
G
Sbjct: 755 G 755
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 164/382 (42%), Gaps = 44/382 (11%)
Query: 126 LCIVLHIAVASNDLKMAQTLVFEFWATPRLD-VHHLFDQFTERLIYTYKDWGAHPLVFDV 184
L +VL A N + TL+ F +D LF +R I D A+ + D
Sbjct: 274 LSLVLDCGPAPNVVTFC-TLINGFCKRGEMDRAFDLFKVMEQRGIEP--DLIAYSTLIDG 330
Query: 185 FFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEV 244
+F+ HK + +VV + ++++ G+ A V++
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS--GDL---ATASVVYKRMLCQ 385
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+S N ++Y I++ LCQ G++ EA + Q+ G P +V+Y +I G+C+ G L
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
L E++ + G P+ +Y ++D L K G ++ A R +M + + VV+ +LI G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+C+ A K+F M I PD ++T+++ G++ EA LF M MGLEPD
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 425 EVTYTALIYGHC-----------------------------------KAGEMREAFSIHN 449
+ Y LI C K + +A N
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 450 QMVQKGLTPNVVTYTILVDGLC 471
+++ + P++VTY ++ G C
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYC 647
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 123/237 (51%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
++F + GV + + ++ + + G + A + +M G P+VV+Y ++I G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
CQ G++ + + ++ ++G+ P+ Y+++ID CK G + + +M K G PD
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
V+Y L+ G K G + A + +M + I + V + S++ G C++ + EA K+F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
M + G++PD T+T ++ G + EA + +M + GL P+ + Y L+D CK
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 105/198 (53%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A + F E + + ++YN ++ C L ++ EA + ++ P+ V+ ++I
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C+ ++ +++ + KG +PN Y ++D K+ ++ + ++ EM + G+ P
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
V Y+ +I G CK G V A +F + K++PD V+Y ++ G CK+G++VEA L+
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799
Query: 414 SEMLVMGLEPDEVTYTAL 431
ML G++PD++ AL
Sbjct: 800 EHMLRNGVKPDDLLQRAL 817
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 144/242 (59%), Gaps = 1/242 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+ R E G +S N VL L + +++ A LL + CG P+VV++ +I
Sbjct: 235 KALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLI 293
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+G+C+ G++++ L + ++++G+ P+ Y+ +ID K G + ++ + GV
Sbjct: 294 NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
D VV+++ I + KSG+++ A ++ M + I P+ V+YT ++ GLC+ G++ EA +
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ ++L G+EP VTY++LI G CK G +R F+++ M++ G P+VV Y +LVDGL K
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 473 RG 474
+G
Sbjct: 474 QG 475
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 150/297 (50%), Gaps = 8/297 (2%)
Query: 177 AHPLVFDVFFQXXXXXXXXXXXXXXFHKL-LSYGIVVSVDSCNLFLTRLCGNFEGKKRAI 235
AH V D F FH+L + G V + SCN L L + + + A
Sbjct: 219 AHGFVLDALF-----CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL--SVDQIEVAS 271
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
R+ + G + N +++ +++ C+ G++ A +L ME G PD+++Y +I GY
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
+ G L KL + KG++ + V+++ ID+ K+G++ A V + M G+ P+
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
V YT LI G C+ G + A ++ ++ ++ + P V+Y+S++ G CK G + L+ +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
M+ MG PD V Y L+ G K G M A +M+ + + NVV + L+DG C+
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 120/214 (56%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
+S + N+V+H L + ++++A + PD+V+Y +I GYC + +L++
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
++ E L+ PN +I +LCKN ++ A R+ M + G P+ V Y L+ F
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
KS ++ + KLF+EM++K I P VSY+ ++ GLCK G++ EA +F + + L PD
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 747
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
V Y LI G+CK G + EA ++ M++ G+ P+
Sbjct: 748 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 126/235 (53%), Gaps = 6/235 (2%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII------SGYCQIG 299
+ N + +N ++ C+L + EA + M G PDV ++ ++ +C+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 300 QLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYT 359
+ L+L + +QR + + V N +I LL K + +A + + + + PD V Y
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 360 TLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVM 419
T+I G+C + A ++F+ +K P+ V+ T ++H LCK M A ++FS M
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 420 GLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G +P+ VTY L+ K+ ++ +F + +M +KG++P++V+Y+I++DGLCKRG
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 105/198 (53%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A + F E + + ++YN ++ C L ++ EA + ++ P+ V+ ++I
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C+ ++ +++ + KG +PN Y ++D K+ ++ + ++ EM + G+ P
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
V Y+ +I G CK G V A +F + K++PD V+Y ++ G CK+G++VEA L+
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770
Query: 414 SEMLVMGLEPDEVTYTAL 431
ML G++PD++ AL
Sbjct: 771 EHMLRNGVKPDDLLQRAL 788
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 133/231 (57%)
Query: 244 VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEK 303
+ +S N +S+N+V+ +LC+L V A + M +PD +Y ++ G C+ ++++
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 304 VLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
+ L++E+Q +G P+ +YN +ID LCK G++ +++ M G P+ V Y TLI
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
G C G + A L + M K +P+ V+Y ++++GL K + +A +L S M G
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ Y+ LI G K G+ EA S+ +M +KG PN+V Y++LVDGLC+ G
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 136/259 (52%), Gaps = 1/259 (0%)
Query: 216 SCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQ 275
S NL + LC RAI VFR PE + +Y ++ LC+ ++ EA LL +
Sbjct: 189 SFNLVIKALC-KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 276 MEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGE 335
M+ G P V Y V+I G C+ G L +V KL++ + KG PNE YN +I LC G+
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 336 VVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
+ +A +L M P++V Y TLI+G K + A +L M+++ + Y+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
++ GL K GK EA L+ +M G +P+ V Y+ L+ G C+ G+ EA I N+M+ G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 456 LTPNVVTYTILVDGLCKRG 474
PN TY+ L+ G K G
Sbjct: 428 CLPNAYTYSSLMKGFFKTG 446
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 141/265 (53%), Gaps = 38/265 (14%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG--------------- 289
G N ++YN ++H LC GK+ +A +LL +M +P+ V+YG
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 290 --------------------VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDL 329
V+ISG + G+ E+ + L ++ KG +PN VY+ ++D
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 330 LCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
LC+ G+ EA+ +L M G P+ Y++L+ GF K+G A +++ EM + +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
Y+ ++ GLC +G++ EA ++S+ML +G++PD V Y+++I G C G M A +++
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 450 QMV---QKGLTPNVVTYTILVDGLC 471
+M+ + P+VVTY IL+DGLC
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLC 551
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 128/243 (52%), Gaps = 3/243 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+R+ E G N Y++++ L + GK +EA +L +M G P++V Y V++
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G+ + +++ + G PN Y Y++++ K G EA +V +EM K G
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ Y+ LI G C G V A ++ +M I PD V+Y+S++ GLC IG M A KL+
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Query: 414 SEMLVM---GLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
EML +PD VTY L+ G C ++ A + N M+ +G P+V+T ++ L
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Query: 471 CKR 473
++
Sbjct: 586 SEK 588
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 136/269 (50%), Gaps = 25/269 (9%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EGK + A+ ++R+ E G N + Y++++ LC+ GK EA +L +M G +P+ +
Sbjct: 375 EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y ++ G+ + G E+ +++ +E+ + G N++ Y+ +ID LC G V EA V +M
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML 494
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM---KQKKIVPDFVSYTSMLHGLCKIG 404
G+ PD V Y+++I G C G++ AA KL+ EM ++ K PD V+Y +L GLC
Sbjct: 495 TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALI------YGHCKAG---------------EMRE 443
+ A L + ML G +PD +T + C G +
Sbjct: 555 DISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSG 614
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
A +I M+ K L P T+ ++V +CK
Sbjct: 615 ACTIVEVMLGKYLAPKTSTWAMIVREICK 643
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 208/474 (43%), Gaps = 84/474 (17%)
Query: 80 VLKPFESKLNPHHLIWVLINIKNDYVLVLDFFNWA-RSR---RDKPSLEALCIVLHIAVA 135
L F S L + VL ++ L L+F+NW RS + + EA C+++H+ V
Sbjct: 47 TLHQFSSSLTNPLISRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVG 106
Query: 136 SNDLKMAQTLVFEFWATP--RLDVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXX 193
S A +++ + +L H+ LI +Y+ G+ P VFD +
Sbjct: 107 SRRFDDALSIMANLMSVEGEKLSPLHVLSG----LIRSYQACGSSPDVFDSLVRACTQNG 162
Query: 194 XXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSY 253
+ + G VSV + N F+ L N R +V++E +G N ++
Sbjct: 163 DAQGAYEVIEQTRAEGFCVSVHALNNFMGCLL-NVNEIDRFWKVYKEMDSLGYVENVNTF 221
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N+V++S C+ K+ EA ++ +M CG P+VVS+ ++I G C+ G + L+L+ ++
Sbjct: 222 NLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGM 281
Query: 314 KG---LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
+ PN YN++I+ CK G + AER+ +M K GV + Y L+ + ++G+
Sbjct: 282 MSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGS 341
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLH-------------------------------- 398
A +L DEM K +V + V Y S+++
Sbjct: 342 SDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAI 401
Query: 399 ---GLCKIG---------------KMVE--------------------AHKLFSEMLVMG 420
GLC+ G K+VE A ++ MLV G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 421 LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
L D +++ LI G+ K G++ A I++ M++ T N+V Y +V+GL KRG
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRG 515
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 122/244 (50%), Gaps = 6/244 (2%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A+ R+ E + + + +N ++H + K+ A +L M G D +S+G +
Sbjct: 413 KEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTL 472
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I GY + G+LE+ L++ + + + N +YN+I++ L K G AE V+ M
Sbjct: 473 IDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME---- 528
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK--KIVPDFVSYTSMLHGLCKIGKMVEA 409
D V Y TL++ K+GNV A + +M+++ + V++ M++ LCK G +A
Sbjct: 529 IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
++ M+ G+ PD +TY LI K + +H+ ++ +G+TP+ Y +V
Sbjct: 589 KEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRP 648
Query: 470 LCKR 473
L R
Sbjct: 649 LLDR 652
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 124/251 (49%), Gaps = 6/251 (2%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
G A+R+ E G+ NT+ YN +++ L G ++ A ++L M D
Sbjct: 337 GRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDR 396
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
+ +++ G C+ G +++ ++ ++ K L + +N ++ ++ ++ A+++L
Sbjct: 397 FTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGS 456
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M G+ D + + TLI G+ K G + A +++D M + + V Y S+++GL K G
Sbjct: 457 MLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGM 516
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV--VTY 463
A + + M + D VTY L+ K G + EA I ++M ++ +V VT+
Sbjct: 517 AGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTF 572
Query: 464 TILVDGLCKRG 474
I+++ LCK G
Sbjct: 573 NIMINHLCKFG 583
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 134/239 (56%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +F E + + SYN +L ++C+ G++ A +L QM +P+VVSY +I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+ + G+ ++ L L E++ G+ + YN ++ + K G EA +LREM G+
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V Y L+ G+ K G K+F EMK++ ++P+ ++Y++++ G K G EA ++F
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
E GL D V Y+ALI CK G + A S+ ++M ++G++PNVVTY ++D +
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 133/244 (54%), Gaps = 1/244 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG-KVKEAHNLLMQMEFCGNVPDVVSYGV 290
+ AI VF E G+ N ++YN V+ + + G + K+ +M+ G PD +++
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+++ + G E L +E+ + + + + YN ++D +CK G++ A +L +M
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ P+ V Y+T+I GF K+G A LF EM+ I D VSY ++L K+G+ EA
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ EM +G++ D VTY AL+ G+ K G+ E + +M ++ + PN++TY+ L+DG
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 471 CKRG 474
K G
Sbjct: 525 SKGG 528
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 139/275 (50%), Gaps = 4/275 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSL 260
F+ + YG+ ++ + N + CG + K+ + F E GV + +++N +L ++
Sbjct: 291 FNSMKEYGLRPNLVTYNAVID-ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AV 348
Query: 261 CQLGKVKEA-HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
C G + EA NL +M DV SY ++ C+ GQ++ +++ ++ K + PN
Sbjct: 349 CSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPN 408
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
Y+ +ID K G EA + EM G+ D V Y TL+S + K G A +
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
EM I D V+Y ++L G K GK E K+F+EM + P+ +TY+ LI G+ K G
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+EA I + GL +VV Y+ L+D LCK G
Sbjct: 529 LYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + I V S N L +C + A + + P + N +SY+ V+
Sbjct: 362 FDEMTNRRIEQDVFSYNTLLDAICKGGQ-MDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 420
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ G+ EA NL +M + G D VSY ++S Y ++G+ E+ L ++ E+ G++ +
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN ++ K G+ E ++V EM + V P+ + Y+TLI G+ K G A ++F E
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K + D V Y++++ LCK G + A L EM G+ P+ VTY ++I ++ M
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 442 REAFSIHN 449
+ N
Sbjct: 601 DRSADYSN 608
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVV-SYGVIISGYCQIGQLEKVLKLMEELQRK 314
++ +L + GKV A + + F G + V ++ +IS Y + G E+ + + ++
Sbjct: 239 MISTLGRYGKVTIAKRIF-ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 315 GLRPNEYVYNNIIDLLCKNG-EVVEAERVLREMTKHGVFPDNVV---------------- 357
GLRPN YN +ID K G E + + EM ++GV PD +
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 358 -------------------YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
Y TL+ CK G + A ++ +M K+I+P+ VSY++++
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
G K G+ EA LF EM +G+ D V+Y L+ + K G EA I +M G+
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 459 NVVTYTILVDGLCKRG 474
+VVTY L+ G K+G
Sbjct: 478 DVVTYNALLGGYGKQG 493
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 25/270 (9%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
G F+ A+ +F E +G++ + +SYN +L ++G+ +EA ++L +M G D
Sbjct: 422 AGRFD---EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
VV+Y ++ GY + G+ ++V K+ E++R+ + PN Y+ +ID K G EA + R
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
E G+ D V+Y+ LI CK+G V +A L DEM ++ I P+ V+Y S++ +
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Query: 405 KMVEAHKL-------FSEMLVMGLEPDEVTYTALIYGH------------CKAG--EMRE 443
M + FS + L E ++G C+ G E+
Sbjct: 599 TMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSC 658
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ +M Q + PNVVT++ +++ C R
Sbjct: 659 ILEVFRKMHQLEIKPNVVTFSAILNA-CSR 687
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 394 TSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
++M+ L + GK+ A ++F G ++ALI + ++G EA S+ N M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 454 KGLTPNVVTYTILVDGLCKRG 474
GL PN+VTY ++D K G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGG 317
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 156/305 (51%), Gaps = 9/305 (2%)
Query: 171 TYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEG 230
T++ W + LV+D+ K+ + VS S N L +F
Sbjct: 116 TFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLY----HFRE 171
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
+ V++E + N +Y+ V+ LC+ K+++A L E+ P VVS+
Sbjct: 172 TDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNS 227
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
I+SGYC++G ++ + + GL P+ Y +N +I+ LC G + EA + +M KHG
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
V PD+V Y L GF G +S A ++ +M K + PD ++YT +L G C++G +
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 411 KLFSEMLVMGLEPDEVT-YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
L +ML G E + + + ++ G CK G + EA S+ NQM GL+P++V Y+I++ G
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 470 LCKRG 474
LCK G
Sbjct: 408 LCKLG 412
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 123/219 (56%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
+++L LC+ G++ EA +L QM+ G PD+V+Y ++I G C++G+ + L L +E+
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
K + PN + ++ LC+ G ++EA +L + G D V+Y +I G+ KSG +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A +LF + + I P ++ S+++G CK + EA K+ + + GL P V+YT L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ G + + +M +G+ P VTY+++ GLC+
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 161/341 (47%), Gaps = 41/341 (12%)
Query: 172 YKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLC--GNFE 229
+KD G + F+ F +L G+V SV S N+ + LC G+
Sbjct: 215 WKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI- 273
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
A+ + + + GV ++++YNI+ LG + A ++ M G PDV++Y
Sbjct: 274 --AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI-IDLLCKNGEVVEAERVLREMTK 348
+++ G CQ+G ++ L L++++ +G N + ++ + LCK G + EA + +M
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
G+ PD V Y+ +I G CK G A L+DEM K+I+P+ ++ ++L GLC+ G ++E
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLE 451
Query: 409 AH-----------------------------------KLFSEMLVMGLEPDEVTYTALIY 433
A +LF ++ G+ P T+ +LIY
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G+CK + EA I + + GL P+VV+YT L+D G
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 142/310 (45%), Gaps = 50/310 (16%)
Query: 213 SVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK---- 267
S+ C++ L+ LC G+ A+ +F + G+S + ++Y+IV+H LC+LGK
Sbjct: 362 SIIPCSVMLSGLCKT--GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 268 -------------------------------EAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
EA +LL + G D+V Y ++I GY
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ G +E+ L+L + + G+ P+ +N++I CK + EA ++L + +G+ P V
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE- 415
YTTL+ + GN + +L EMK + I P V+Y+ + GLC+ K + + E
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRER 599
Query: 416 -----------MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
M G+ PD++TY +I C+ + AF M + L + TY
Sbjct: 600 IFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYN 659
Query: 465 ILVDGLCKRG 474
IL+D LC G
Sbjct: 660 ILIDSLCVYG 669
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+ +F+ E G++ + ++N +++ C+ + EA +L ++ G P VVSY +
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK-----NGEVVEAERV---- 342
+ Y G + + +L E++ +G+ P Y+ I LC+ N V ER+
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 343 ---LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
LR+M G+ PD + Y T+I C+ ++S A + MK + + +Y ++
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
LC G + +A + + + YT LI HC G+ A + +Q++ +G +
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724
Query: 460 VVTYTILVDGLCKR 473
+ Y+ +++ LC+R
Sbjct: 725 IRDYSAVINRLCRR 738
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 156/305 (51%), Gaps = 9/305 (2%)
Query: 171 TYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEG 230
T++ W + LV+D+ K+ + VS S N L +F
Sbjct: 116 TFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLY----HFRE 171
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
+ V++E + N +Y+ V+ LC+ K+++A L E+ P VVS+
Sbjct: 172 TDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNS 227
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
I+SGYC++G ++ + + GL P+ Y +N +I+ LC G + EA + +M KHG
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
V PD+V Y L GF G +S A ++ +M K + PD ++YT +L G C++G +
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 411 KLFSEMLVMGLEPDEVT-YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
L +ML G E + + + ++ G CK G + EA S+ NQM GL+P++V Y+I++ G
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 470 LCKRG 474
LCK G
Sbjct: 408 LCKLG 412
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 123/219 (56%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
+++L LC+ G++ EA +L QM+ G PD+V+Y ++I G C++G+ + L L +E+
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
K + PN + ++ LC+ G ++EA +L + G D V+Y +I G+ KSG +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A +LF + + I P ++ S+++G CK + EA K+ + + GL P V+YT L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ G + + +M +G+ P VTY+++ GLC+
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 161/341 (47%), Gaps = 41/341 (12%)
Query: 172 YKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLC--GNFE 229
+KD G + F+ F +L G+V SV S N+ + LC G+
Sbjct: 215 WKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI- 273
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
A+ + + + GV ++++YNI+ LG + A ++ M G PDV++Y
Sbjct: 274 --AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI-IDLLCKNGEVVEAERVLREMTK 348
+++ G CQ+G ++ L L++++ +G N + ++ + LCK G + EA + +M
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 391
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
G+ PD V Y+ +I G CK G A L+DEM K+I+P+ ++ ++L GLC+ G ++E
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLE 451
Query: 409 AH-----------------------------------KLFSEMLVMGLEPDEVTYTALIY 433
A +LF ++ G+ P T+ +LIY
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G+CK + EA I + + GL P+VV+YT L+D G
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 51/319 (15%)
Query: 205 LLSYGIVV-SVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
+LS G + S+ C++ L+ LC G+ A+ +F + G+S + ++Y+IV+H LC+
Sbjct: 353 MLSRGFELNSIIPCSVMLSGLCKT--GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 263 LGKVK-----------------------------------EAHNLLMQMEFCGNVPDVVS 287
LGK EA +LL + G D+V
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y ++I GY + G +E+ L+L + + G+ P+ +N++I CK + EA ++L +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
+G+ P V YTTL+ + GN + +L EMK + I P V+Y+ + GLC+ K
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 408 EAHKLFSE------------MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
+ + E M G+ PD++TY +I C+ + AF M +
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 456 LTPNVVTYTILVDGLCKRG 474
L + TY IL+D LC G
Sbjct: 651 LDASSATYNILIDSLCVYG 669
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+ +F+ E G++ + ++N +++ C+ + EA +L ++ G P VVSY +
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK-----NGEVVEAERV---- 342
+ Y G + + +L E++ +G+ P Y+ I LC+ N V ER+
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 343 ---LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
LR+M G+ PD + Y T+I C+ ++S A + MK + + +Y ++
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
LC G + +A + + + YT LI HC G+ A + +Q++ +G +
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724
Query: 460 VVTYTILVDGLCKR 473
+ Y+ +++ LC+R
Sbjct: 725 IRDYSAVINRLCRR 738
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 129/241 (53%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A ++F + G+S N ++Y I++ LCQ G +A L +M+ GN PD V++ ++
Sbjct: 217 AQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLD 276
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C++G++ + +L+ ++ G Y+++ID L + +A + M K + P
Sbjct: 277 GFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP 336
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D ++YT LI G K+G + A KL M K I PD Y +++ LC G + E L
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQ 396
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM PD T+T LI C+ G +REA I ++ + G +P+V T+ L+DGLCK
Sbjct: 397 LEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Query: 474 G 474
G
Sbjct: 457 G 457
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 151/347 (43%), Gaps = 75/347 (21%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F + GI + + + ++ LC A ++F E G +++++N +L C
Sbjct: 221 FDDMTGRGISPNRVTYTILISGLCQRGSADD-ARKLFYEMQTSGNYPDSVAHNALLDGFC 279
Query: 262 QLGKVKEAHNLLMQMEFCGNV-----------------------------------PDVV 286
+LG++ EA LL E G V PD++
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDII 339
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
Y ++I G + G++E LKL+ + KG+ P+ Y YN +I LC G + E + EM
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM 399
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
++ FPD +T LI C++G V A ++F E+++ P ++ +++ GLCK G++
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459
Query: 407 VEAHKLFSEMLV---------------------------------------MGLEPDEVT 427
EA L +M V G PD V+
Sbjct: 460 KEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVS 519
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
Y LI G C+AG++ A + N + KGL+P+ VTY L++GL + G
Sbjct: 520 YNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG 566
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 136/269 (50%), Gaps = 10/269 (3%)
Query: 212 VSVDS-CNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAH 270
VSVDS C L ++A+ F E + +YN++L + + +E
Sbjct: 123 VSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR----EEVF 178
Query: 271 NLLM-----QMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN 325
+L +M C P++ ++G+++ G + G+ K+ +++ +G+ PN Y
Sbjct: 179 FMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
+I LC+ G +A ++ EM G +PD+V + L+ GFCK G + A +L ++
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 386 IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
V Y+S++ GL + + +A +L++ ML ++PD + YT LI G KAG++ +A
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDAL 358
Query: 446 SIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + M KG++P+ Y ++ LC RG
Sbjct: 359 KLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 135/248 (54%), Gaps = 17/248 (6%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
+ E GVS ++ + +++ + ++G ++A +M+ PDV +Y VI+
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL--- 169
Query: 296 CQIGQLEKVLKLM-----EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
++ E+V ++ E+ + PN Y + ++D L K G +A+++ +MT G
Sbjct: 170 -RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ P+ V YT LISG C+ G+ A KLF EM+ PD V++ ++L G CK+G+MVEA
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 411 KLF----SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
+L + V+GL Y++LI G +A +AF ++ M++K + P+++ YTIL
Sbjct: 289 ELLRLFEKDGFVLGLR----GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTIL 344
Query: 467 VDGLCKRG 474
+ GL K G
Sbjct: 345 IQGLSKAG 352
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 127/260 (48%), Gaps = 41/260 (15%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+++ P G+S +T YN V+ +LC G ++E +L ++M + PD ++ ++I
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM------- 346
C+ G + + ++ E+++ G P+ +N +ID LCK+GE+ EA +L +M
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPAS 476
Query: 347 --------------------------------TKHGVFPDNVVYTTLISGFCKSGNVSAA 374
G PD V Y LI+GFC++G++ A
Sbjct: 477 LFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGA 536
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
KL + ++ K + PD V+Y ++++GL ++G+ EA KLF P Y +L+
Sbjct: 537 LKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTW 594
Query: 435 HCKAGEMREAFSIHNQMVQK 454
C+ ++ AF++ + ++K
Sbjct: 595 SCRKRKVLVAFNLWMKYLKK 614
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF------------- 278
+ A +F E + G S + ++N ++ LC+ G++KEA LL +ME
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS 484
Query: 279 --------------------------CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
G+ PD+VSY V+I+G+C+ G ++ LKL+ LQ
Sbjct: 485 GNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
KGL P+ YN +I+ L + G EA ++ K VY +L++ C+ V
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVL 602
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT---YT 429
A L+ MK K + T+ + + + K E + ++ + DE+T YT
Sbjct: 603 VAFNLW--MKYLKKISCLDDETA--NEIEQCFKEGETERALRRLIELDTRKDELTLGPYT 658
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ G C++G EA + + + +K + + L+ GLCKR
Sbjct: 659 IWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKR 702
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
+ID+L ++ + L E+ GV D+ + LIS + K G A + F MK+
Sbjct: 98 VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157
Query: 386 IVPDFVSYTSMLHGLCKIGK-MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD +Y +L + + + A +++EML P+ T+ L+ G K G +A
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + M +G++PN VTYTIL+ GLC+RG
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRG 247
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A R + + G S + +SYN++++ C+ G + A LL ++ G PD V+Y +I
Sbjct: 500 KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV--------------- 337
+G ++G+ E+ KL + R + VY +++ C+ +V+
Sbjct: 560 NGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISC 617
Query: 338 ----------------EAERVLREMTKHGVFPDNVV---YTTLISGFCKSGNVSAAHKLF 378
E ER LR + + D + YT + G C+SG A +F
Sbjct: 618 LDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVF 677
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+++KKI+ S ++HGLCK ++ A ++F
Sbjct: 678 SVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 146/270 (54%), Gaps = 2/270 (0%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
++ G + +C L LT LC N RAI FR+ ++G N +++ ++ LC+ G
Sbjct: 243 MIQRGFIPDNATCTLILTALCEN-GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKG 301
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL-RPNEYVY 323
+K+A +L +M G P+V ++ +I G C+ G EK +L +L R +PN + Y
Sbjct: 302 SIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY 361
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
++I CK ++ AE + M + G+FP+ YTTLI+G CK+G+ A++L + M
Sbjct: 362 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD 421
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
+ +P+ +Y + + LCK + EA++L ++ GLE D VTYT LI CK ++ +
Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
A + +M + G ++ IL+ C++
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQ 511
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 136/276 (49%), Gaps = 36/276 (13%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + G++ ++++ N VL +LG ++ A N+ +M G VPD SY +++
Sbjct: 166 AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVI 225
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G + G++++ + + + ++G P+ I+ LC+NG V A R+M G P
Sbjct: 226 GCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKP 285
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQK----------------------------- 384
+ + +T+LI G CK G++ A ++ +EM +
Sbjct: 286 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 385 -KIV------PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
K+V P+ +YTSM+ G CK K+ A LFS M GL P+ TYT LI GHCK
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
Query: 438 AGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
AG A+ + N M +G PN+ TY +D LCK+
Sbjct: 406 AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK 441
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N +Y ++ C+ K+ A L +M+ G P+V +Y +I+G+C+ G + +LM
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 416
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+ +G PN Y YN ID LCK EA +L + G+ D V YT LI CK
Sbjct: 417 NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ 476
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
+++ A F M + D ++ C+ KM E+ +LF ++ +GL P + TY
Sbjct: 477 NDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETY 536
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
T++I +CK G++ A + M + G P+ TY L+ GLCK+
Sbjct: 537 TSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 121/222 (54%), Gaps = 15/222 (6%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
Y + SL G +++AH ++ M + + +IG+L + + ++ ++Q
Sbjct: 130 YLVTADSLLANGNLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQ 174
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+GL P+ N ++++ + G + AE V EM+ GV PD+ Y ++ G + G +
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A + M Q+ +PD + T +L LC+ G + A F +M+ +G +P+ + +T+LI
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G CK G +++AF + +MV+ G PNV T+T L+DGLCKRG
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 8/272 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F ++ G+ +V++ + C G+F RA + + G N +YN + S
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSF---GRAYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
LC+ + EA+ LL + CG D V+Y ++I C+ + + L + + G +
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
+ N +I C+ ++ E+ER+ + + G+ P YT++IS +CK G++ A K F
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 557
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
MK+ VPD +Y S++ GLCK + EA KL+ M+ GL P EVT L Y +CK
Sbjct: 558 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRN 617
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+ A + + +K V T LV LC
Sbjct: 618 DSANAMILLEPLDKKLWIRTVRT---LVRKLC 646
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 123/218 (56%), Gaps = 1/218 (0%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
+L + ++G++ EA ++M M+ G P ++ ++ ++G +E + +E+ +G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAH 375
+ P+ Y ++ ++G++ EA+R L M + G PDN T +++ C++G V+ A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
F +M P+ +++TS++ GLCK G + +A ++ EM+ G +P+ T+TALI G
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 436 CKAGEMREAFSIHNQMVQKGL-TPNVVTYTILVDGLCK 472
CK G +AF + ++V+ PNV TYT ++ G CK
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 370
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 137/244 (56%), Gaps = 8/244 (3%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLM-QME---FCGNVPDVVS 287
KRA V E G+ + SYN +L C++ + +N ++ +ME FC DVVS
Sbjct: 272 KRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC----DVVS 327
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y +I +C+ K +L EE+++KG+ N Y ++I + G A+++L +MT
Sbjct: 328 YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMT 387
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
+ G+ PD + YTT++ CKSGNV A+ +F++M + +I PD +SY S++ GLC+ G++
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVT 447
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
EA KLF +M PDE+T+ +I G + ++ A+ + +QM+ KG T + L+
Sbjct: 448 EAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Query: 468 DGLC 471
C
Sbjct: 508 KASC 511
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 148/274 (54%), Gaps = 2/274 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
++ ++ G+ +C + LC + V E V +T+ YN ++ C
Sbjct: 172 WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFC 231
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ G++++A L M G PD+V+Y V+++ Y L++ +M E+ R G++ + Y
Sbjct: 232 KAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAY 291
Query: 322 VYNNIIDLLCKNGEVVEAER-VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
YN ++ C+ + +++EM G F D V Y+TLI FC++ N A++LF+E
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEE 350
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M+QK +V + V+YTS++ + G A KL +M +GL PD + YT ++ CK+G
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +A+ + N M++ +TP+ ++Y L+ GLC+ G
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 125/236 (52%), Gaps = 1/236 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A++VF E + YN + L + + + A + M+ G +Y IS
Sbjct: 28 AVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFIS 87
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C++ + + + L+ +++ G P+ + +N +DLLC+ +V A + M + G P
Sbjct: 88 GLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREP 147
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V YT LI+G ++G V+ A ++++ M + + PD + +++ GLC K+ A+++
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV 207
Query: 414 SEMLVMG-LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
+E + ++ V Y ALI G CKAG + +A ++ + M + G P++VTY +L++
Sbjct: 208 AEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 86/172 (50%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++A R+F E + G+ N ++Y ++ + + G A LL QM G PD + Y I
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ C+ G ++K + ++ + P+ YN++I LC++G V EA ++ +M
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
PD + + +I G + +SAA+K++D+M K D +++ C +
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 90/186 (48%)
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
++Y I+ + G ++ +++ +E++ R + YN I +L + AE + +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M G Y+ ISG CK L +M+ +PD ++ L LC+ K
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ A + F M+ G EPD V+YT LI G +AG++ +A I N M++ G++P+
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 466 LVDGLC 471
LV GLC
Sbjct: 190 LVVGLC 195
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%)
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y + I L K+G + A +V EM + Y I + A ++ +M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K +Y+ + GLCK+ K L S+M +G PD + + C+ ++
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A MVQ+G P+VV+YTIL++GL + G
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAG 163
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 130/220 (59%), Gaps = 1/220 (0%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGN-VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
V+ C++GK + A G VP++V+Y ++S CQ+G++++V L+ L+ +
Sbjct: 177 VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE 236
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
G + Y+N I K G +V+A REM + G+ D V Y+ LI G K GNV A
Sbjct: 237 GFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEA 296
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
L +M ++ + P+ ++YT+++ GLCK+GK+ EA LF+ +L +G+E DE Y LI G
Sbjct: 297 LGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDG 356
Query: 435 HCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
C+ G + AFS+ M Q+G+ P+++TY +++GLC G
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 142/286 (49%), Gaps = 43/286 (15%)
Query: 226 GNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
G F+G A+ RE E G++ + +SY+I++ L + G V+EA LL +M G P
Sbjct: 251 GYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEP 310
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
++++Y II G C++G+LE+ L + G+ +E++Y +ID +C+ G + A +L
Sbjct: 311 NLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML 370
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+M + G+ P + Y T+I+G C +G VS A ++ K +V D ++Y+++L K+
Sbjct: 371 GDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKV 425
Query: 404 -----------------------------------GKMVEAHKLFSEMLVMGLEPDEVTY 428
G EA L+ M M L PD TY
Sbjct: 426 QNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATY 485
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+I G+CK G++ EA + N++ +K V Y ++D LCK+G
Sbjct: 486 ATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKG 530
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 107/191 (56%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
DV+ Y +II+G C+ G L K L L + +G+ N YN++I+ LC+ G +VEA R+
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+ G+ P V Y LI CK G A KL D M K +VP+ + Y S++ G CK+
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
G+ +A ++ S ++ + PD T +++I G+CK G+M EA S+ + K ++ + +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 464 TILVDGLCKRG 474
L+ G C +G
Sbjct: 834 LFLIKGFCTKG 844
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 99/174 (56%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
GV+ NT++YN +++ LCQ G + EA L +E G VP V+YG++I C+ G
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
KL++ + KGL PN +YN+I+D CK G+ +A RV+ V PD +++I G
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
+CK G++ A +F E K K I DF + ++ G C G+M EA L EMLV
Sbjct: 805 YCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLV 858
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 119/224 (53%), Gaps = 5/224 (2%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N ++Y ++ +LCQLGKV E +L+ ++E G D V Y I GY + G L L
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
E+ KG+ + Y+ +ID L K G V EA +L +M K GV P+ + YT +I G CK
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G + A LF+ + I D Y +++ G+C+ G + A + +M G++P +TY
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+I G C AG + EA V KG+ +V+TY+ L+D K
Sbjct: 386 NTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIK 424
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 112/206 (54%)
Query: 247 SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK 306
S + + Y I+++ LC+ G + +A NL + G + ++Y +I+G CQ G L + L+
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
L + L+ GL P+E Y +ID LCK G ++AE++L M G+ P+ ++Y +++ G+C
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
K G A ++ ++ PD + +SM+ G CK G M EA +F+E + D
Sbjct: 772 KLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFF 831
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMV 452
+ LI G C G M EA + +M+
Sbjct: 832 GFLFLIKGFCTKGRMEEARGLLREML 857
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 130/309 (42%), Gaps = 70/309 (22%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
+ + R + E + + + NI+L + +G EA L M PD +Y +I G
Sbjct: 432 LEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKG 491
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
YC+ GQ+E+ L++ EL RK YN IID LCK G + A VL E+ + G++ D
Sbjct: 492 YCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Query: 355 NVVYTTLISG-----------------------------------FCKSGNVSAAHKLFD 379
TL+ CK G+ AA +++
Sbjct: 551 IHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYM 610
Query: 380 EMKQKKIVP----------------------------------DFVSYTSMLHGLCKIGK 405
M++K + D + YT +++GLCK G
Sbjct: 611 IMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGF 670
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+V+A L S G+ + +TY +LI G C+ G + EA + + + GL P+ VTY I
Sbjct: 671 LVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGI 730
Query: 466 LVDGLCKRG 474
L+D LCK G
Sbjct: 731 LIDNLCKEG 739
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A+R+F +G+ + ++Y I++ +LC+ G +A LL M G VP+++ Y I+
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
GYC++GQ E ++++ + P+ + +++I CK G++ EA V E +
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFV-----------SYTSMLHGLC 401
D + LI GFC G + A L EM + V + S L LC
Sbjct: 828 ADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELC 887
Query: 402 KIGKMVEAHKLFSEM 416
+ G++ +A K+ E+
Sbjct: 888 EQGRVPQAIKILDEI 902
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 39/172 (22%)
Query: 342 VLRE-MTKHGVFP-------------------------------------DNVVYTTLIS 363
+LR+ + HG FP DN V + +IS
Sbjct: 120 ILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVIS 179
Query: 364 GFCKSGNVSAAHKLFDE-MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
GFCK G A F+ + +VP+ V+YT+++ LC++GK+ E L + G E
Sbjct: 180 GFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE 239
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
D V Y+ I+G+ K G + +A +MV+KG+ +VV+Y+IL+DGL K G
Sbjct: 240 FDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEG 291
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 146/272 (53%), Gaps = 7/272 (2%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
++LS G+ + + N + +C EG RA + R G + +SYNI+L +L
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCK--EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 263 LGKVKEAHNLLMQM--EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
GK +E L+ +M E C P+VV+Y ++I+ C+ G++E+ + L++ ++ KGL P+
Sbjct: 311 QGKWEEGEKLMTKMFSEKCD--PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
Y Y+ +I C+ G + A L M G PD V Y T+++ CK+G A ++F +
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
+ + P+ SY +M L G + A + EM+ G++PDE+TY ++I C+ G
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ EAF + M P+VVTY I++ G CK
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 134/242 (55%), Gaps = 4/242 (1%)
Query: 229 EGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
EG+K ++F E N ++Y+I++ +LC+ GK++EA NLL M+ G PD SY
Sbjct: 316 EGEKLMTKMFSEK----CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+I+ +C+ G+L+ ++ +E + G P+ YN ++ LCKNG+ +A + ++ +
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
G P++ Y T+ S SG+ A + EM I PD ++Y SM+ LC+ G + E
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
A +L +M P VTY ++ G CKA + +A ++ MV G PN TYT+L++
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Query: 469 GL 470
G+
Sbjct: 552 GI 553
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 123/241 (51%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A RV S +T++YNI++ SLC GK+ A +L Q+ P V++Y ++I
Sbjct: 177 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G +++ LKLM+E+ +GL+P+ + YN II +CK G V A ++R + G P
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D + Y L+ G KL +M +K P+ V+Y+ ++ LC+ GK+ EA L
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
M GL PD +Y LI C+ G + A M+ G P++V Y ++ LCK
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 474 G 474
G
Sbjct: 417 G 417
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 1/242 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+RV + G + +YN +++ C++ ++ +A +L +M PD V+Y ++I
Sbjct: 142 KAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 200
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
C G+L+ LK++ +L +P Y +I+ G V EA +++ EM G+
Sbjct: 201 GSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK 260
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD Y T+I G CK G V A ++ ++ K PD +SY +L L GK E KL
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
++M +P+ VTY+ LI C+ G++ EA ++ M +KGLTP+ +Y L+ C+
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 380
Query: 473 RG 474
G
Sbjct: 381 EG 382
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 128/237 (54%), Gaps = 3/237 (1%)
Query: 218 NLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
++ +T LC +GK + A+ + + E G++ + SY+ ++ + C+ G++ A L M
Sbjct: 337 SILITTLCR--DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
G +PD+V+Y +++ C+ G+ ++ L++ +L G PN YN + L +G+
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
+ A ++ EM +G+ PD + Y ++IS C+ G V A +L +M+ + P V+Y +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
L G CK ++ +A + M+ G P+E TYT LI G AG EA + N +V+
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 1/219 (0%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
+ H C+ G E+ +LL M G PDV+ +I G+ + + K +++ME L++ G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAH 375
+P+ + YN +I+ CK + +A RVL M PD V Y +I C G + A
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
K+ +++ P ++YT ++ G + EA KL EML GL+PD TY +I G
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
CK G + AF + + KG P+V++Y IL+ L +G
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 3/258 (1%)
Query: 218 NLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
N+ + LC GK A++V + ++Y I++ + G V EA L+ +M
Sbjct: 197 NIMIGSLCS--RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
G PD+ +Y II G C+ G +++ +++ L+ KG P+ YN ++ L G+
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
E E+++ +M P+ V Y+ LI+ C+ G + A L MK+K + PD SY +
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
+ C+ G++ A + M+ G PD V Y ++ CK G+ +A I ++ + G
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 457 TPNVVTYTILVDGLCKRG 474
+PN +Y + L G
Sbjct: 435 SPNSSSYNTMFSALWSSG 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
++S G + + + N L LC N + + A+ +F + EVG S N+ SYN + +L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQ-ALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
G A +++++M G PD ++Y +IS C+ G +++ +L+ +++ P+
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN ++ CK + +A VL M +G P+ YT LI G +G + A +L +++
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 382 KQKKIVPDF 390
+ + ++
Sbjct: 570 VRIDAISEY 578
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 3/298 (1%)
Query: 178 HPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRV 237
P +F V + ++ YG+ L LC N K A +V
Sbjct: 166 EPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKN-GSVKEASKV 224
Query: 238 FREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQ 297
F + E N + +L+ C+ GK+ EA +L+QM+ G PD+V + ++SGY
Sbjct: 225 FEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH 283
Query: 298 IGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV-EAERVLREMTKHGVFPDNV 356
G++ LM +++++G PN Y +I LC+ + + EA RV EM ++G D V
Sbjct: 284 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
YT LISGFCK G + + + D+M++K ++P V+Y ++ K + E +L +M
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G PD + Y +I CK GE++EA + N+M GL+P V T+ I+++G +G
Sbjct: 404 KRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 132/268 (49%), Gaps = 4/268 (1%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
G +V+ + + LC + A+RVF E G + ++Y ++ C+ G + +
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
+++L M G +P V+Y I+ + + Q E+ L+L+E+++R+G P+ +YN +I
Sbjct: 361 GYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKI-- 386
L CK GEV EA R+ EM +G+ P + +I+GF G + A F EM + I
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFS 480
Query: 387 VPDFVSYTSMLHGLCKIGKMVEAHKLFS--EMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
P + + S+L+ L + K+ A ++S E + +T I+ G ++EA
Sbjct: 481 APQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEA 540
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCK 472
S M++ L P TY L+ GL K
Sbjct: 541 CSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 121/235 (51%), Gaps = 5/235 (2%)
Query: 245 GVSWNTMSYNIVLHSLCQLGK-VKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEK 303
G N Y +++ +LC+ K + EA + ++ME G D+V+Y +ISG+C+ G ++K
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 304 VLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
+++++++KG+ P++ Y I+ K + E ++ +M + G PD ++Y +I
Sbjct: 361 GYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL-- 421
CK G V A +L++EM+ + P ++ M++G G ++EA F EM+ G+
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFS 480
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK--GLTPNVVTYTILVDGLCKRG 474
P T +L+ + ++ A + + + K NV +TI + L +G
Sbjct: 481 APQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKG 535
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 135/246 (54%)
Query: 229 EGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
E + A+ V+ + GV N + +I+L++LC+ GK+++A +L + G VP+ V Y
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+I GYC+ G L +E ++++G++P+ YN +I C+ GE+ AE+ + +M
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
GV P Y LI G+ + + EM+ +P+ VSY ++++ LCK K++E
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
A + +M G+ P Y LI G C G++ +AF +M++KG+ N+VTY L+D
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 469 GLCKRG 474
GL G
Sbjct: 573 GLSMTG 578
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 152/274 (55%), Gaps = 7/274 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F ++L+ ++ S+ + N + C GN E ++ +V + + +++N +L
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPE---KSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
L + G V++A N+L +M+ G VPD ++ ++ GY + E L + E G++ N
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 320 EYVYNNIIDLLCKNGEVVEAERVL-REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
Y + +++ LCK G++ +AE +L REM K G+ P+ V+Y T+I G+C+ G++ A
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAK-GLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
+ M+++ + PD ++Y ++ C++G+M A K ++M + G+ P TY LI G+ +
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
E + F I +M G PNVV+Y L++ LCK
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 158/349 (45%), Gaps = 42/349 (12%)
Query: 165 TERLIYTYKDWGAHP--LVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLT 222
E ++ KD G P F + F + + G+ ++ +C++ L
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 223 RLC-------------------------------------GNFEGKKRAIRVFREYPEVG 245
LC G+ G + I + G
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ---G 419
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
+ + ++YN ++ C+LG+++ A + +M+ G P V +Y ++I GY + + +K
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
+++E++ G PN Y +I+ LCK +++EA+ V R+M GV P +Y LI G
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
C G + A + EM +K I + V+Y +++ GL GK+ EA L E+ GL+PD
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY +LI G+ AG ++ +++ +M + G+ P + TY +L+ K G
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 5/272 (1%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
+K+ G+ SV++ N+ + +E K + +E + G N +SY +++ LC+
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDK-CFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
K+ EA + ME G P V Y ++I G C G++E + +E+ +KG+ N
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
YN +ID L G++ EAE +L E+++ G+ PD Y +LISG+ +GNV L++EMK
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
+ I P +Y +L LC + +LF EM L+PD + Y +++ + G+M
Sbjct: 627 RSGIKPTLKTY-HLLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDME 682
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+AF++ QM++K + + TY L+ G K G
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 139/263 (52%), Gaps = 7/263 (2%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
G+ V N+ + C +GK + A R +E + G+ N ++YN ++ L GK+
Sbjct: 524 GVSPKVRIYNMLIDGCCS--KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
EA +LL+++ G PDV +Y +ISGY G +++ + L EE++R G++P Y+ +I
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
L K G + ER+ EM+ + PD +VY ++ + G++ A L +M +K I
Sbjct: 642 SLCTKEG-IELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
D +Y S++ G K+GK+ E L EM +EP+ TY ++ GHC+ + A+
Sbjct: 698 LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVW 757
Query: 448 HNQMVQKGLTPNVVTYTILVDGL 470
+ +M +KG +V LV GL
Sbjct: 758 YREMQEKGFLLDVCIGNELVSGL 780
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 41/270 (15%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R YP V + YN+++ LC+ ++ +A L +M +P +++Y +I GYC+
Sbjct: 209 RIYPSVFI------YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKA 262
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
G EK K+ E ++ + P+ +N ++ L K G V +AE VL+EM G PD +
Sbjct: 263 GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF 322
Query: 359 TTLISGF-----------------------------------CKSGNVSAAHKLFDEMKQ 383
+ L G+ CK G + A ++
Sbjct: 323 SILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMA 382
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
K +VP+ V Y +M+ G C+ G +V A M G++PD + Y LI C+ GEM
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
A N+M KG++P+V TY IL+ G ++
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 116/230 (50%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ ++ S ++L L + + + N+ + + P YG I ++ + K
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
L+L ++ + P+ ++YN +ID LCK + +AE++ EM + P + Y TLI G
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+CK+GN + K+ + MK I P +++ ++L GL K G + +A + EM +G PD
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
T++ L G+ + A ++ V G+ N T +IL++ LCK G
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG 368
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+R I ++ E G+ +Y++++ SLC ++ L +M PD++ Y +
Sbjct: 616 QRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSL---KPDLLVYNGV 671
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ Y G +EK L +++ K + ++ YN++I K G++ E ++ EM +
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM 731
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ Y ++ G C+ + +A+ + EM++K + D ++ GL + + EA
Sbjct: 732 EPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEI 791
Query: 412 LFSEM 416
+ SEM
Sbjct: 792 VISEM 796
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
LL ++ + EA + + G++P + T L+ K+ +F + + P
Sbjct: 118 LLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRP 177
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIH 448
Y + K+ + + +LF+ M + P Y LI G CK M +A +
Sbjct: 178 SKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF 237
Query: 449 NQMVQKGLTPNVVTYTILVDGLCKRG 474
++M+ + L P+++TY L+DG CK G
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAG 263
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R + E+ + + + YN VLH G +++A NL QM D +Y +I G ++
Sbjct: 654 RLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
G+L +V L++E+ + + P YN I+ C+ + + A REM + G D +
Sbjct: 714 GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIG 773
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQK 384
L+SG + A + EM +
Sbjct: 774 NELVSGLKEEWRSKEAEIVISEMNGR 799
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 131/228 (57%), Gaps = 1/228 (0%)
Query: 220 FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
+ RLC + A +F E E G+ N ++YN ++ S C G+ +A LL M
Sbjct: 16 IVDRLCKD-GNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
PD+V++ +I+ + + ++ + ++ +E+ R + P YN++ID CK V +A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
+R+L M G PD V ++TLI+G+CK+ V ++F EM ++ IV + V+YT+++HG
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
C++G + A L +EM+ G+ PD +T+ ++ G C E+R+AF+I
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 122/218 (55%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
++ LC+ G A NL +M G P+V++Y +I +C G+ +L+ + K
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAH 375
+ P+ ++ +I+ K +V EAE + +EM + +FP + Y ++I GFCK V A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
++ D M K PD V+++++++G CK ++ ++F EM G+ + VTYT LI+G
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
C+ G++ A + N+M+ G+ P+ +T+ ++ GLC +
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 233
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 104/192 (54%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
DVV I+ C+ G L E+ KG+ PN YN +ID C +G +A+++
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
LR M + + PD V ++ LI+ F K VS A +++ EM + I P ++Y SM+ G CK
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
++ +A ++ M G PD VT++ LI G+CKA + I +M ++G+ N VT
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 187
Query: 463 YTILVDGLCKRG 474
YT L+ G C+ G
Sbjct: 188 YTTLIHGFCQVG 199
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 83/153 (54%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A +++E + T++YN ++ C+ +V +A +L M G PDVV++ +I
Sbjct: 98 EAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLI 157
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+GYC+ +++ +++ E+ R+G+ N Y +I C+ G++ A+ +L EM GV
Sbjct: 158 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
PD + + +++G C + A + +++++ +
Sbjct: 218 PDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M Q I D V T+++ LCK G + A LF+EM G+ P+ +TY +I C +G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+A + M++K + P++VT++ L++ K
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKE 93
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 123/228 (53%)
Query: 247 SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK 306
S N +SYNI++ L + GK+ EA + M G D +YG+ I G C G + K L
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
+M+E++ G + Y Y +IID LCK + EA +++EM+KHGV ++ V LI G
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
+ + A EM + P VSY ++ GLCK GK EA EML G +PD
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY+ L+ G C+ ++ A + +Q +Q GL +V+ + IL+ GLC G
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVG 583
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 144/272 (52%), Gaps = 3/272 (1%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
+++ + V++ S N+ + L N GK A ++R P G + + +Y I +H LC
Sbjct: 349 RIMEHKNSVNIVSYNILIKGLLEN--GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
G V +A ++ ++E G DV +Y II C+ +LE+ L++E+ + G+ N +V
Sbjct: 407 NGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
N +I L ++ + EA LREM K+G P V Y LI G CK+G A EM
Sbjct: 467 CNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
+ PD +Y+ +L GLC+ K+ A +L+ + L GLE D + + LI+G C G++
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A ++ M + T N+VTY L++G K G
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 128/239 (53%), Gaps = 2/239 (0%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F + GV+ N +YN+++ C+ + ++A L M G PDV SY +I+
Sbjct: 136 LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLA 195
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL-REMTKHGVFPDN 355
+ G+L+ L+L +E+ +G+ P+ YN +ID K + A + R + V+P+
Sbjct: 196 KAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNV 255
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
+ +ISG K G V K+++ MKQ + D +Y+S++HGLC G + +A +F+E
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ D VTY ++ G C+ G+++E+ + M K + N+V+Y IL+ GL + G
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENG 373
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 134/244 (54%), Gaps = 2/244 (0%)
Query: 233 RAIRVFREYPEV-GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+A+ VF+ E+ G SYN +L++ + + + +L E G P++ +Y V+
Sbjct: 96 QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I C+ + EK ++ + ++G +P+ + Y+ +I+ L K G++ +A + EM++ GV
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDE-MKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
PD Y LI GF K + A +L+D ++ + P+ ++ M+ GL K G++ +
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
K++ M E D TY++LI+G C AG + +A S+ N++ ++ + +VVTY ++ G
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 471 CKRG 474
C+ G
Sbjct: 336 CRCG 339
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 118/242 (48%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A + +E + GV N+ N ++ L + ++ EA L +M G P VVSY ++
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I G C+ G+ + ++E+ G +P+ Y+ ++ LC++ ++ A + + + G+
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
D +++ LI G C G + A + M+ + + V+Y +++ G K+G A
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATV 625
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
++ M MGL+PD ++Y ++ G C + A + G+ P V T+ ILV +
Sbjct: 626 IWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Query: 472 KR 473
R
Sbjct: 686 NR 687
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 133/231 (57%), Gaps = 3/231 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKK-RAIRVFREYPEVGVSWNTMSYNIVLHSL 260
F + S+ + DS L LCG GK AI + + E GV +TM YN V +L
Sbjct: 395 FCDMWSFPVKGERDSYMSMLESLCG--AGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSAL 452
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+L ++ H+L +M+ G PD+ +Y ++I+ + ++G++++ + + EEL+R +P+
Sbjct: 453 GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDI 512
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
YN++I+ L KNG+V EA +EM + G+ PD V Y+TL+ F K+ V A+ LF+E
Sbjct: 513 ISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEE 572
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
M K P+ V+Y +L L K G+ EA L+S+M GL PD +TYT L
Sbjct: 573 MLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 133/247 (53%)
Query: 220 FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
+L R A R+F + V SY +L SLC GK EA +L ++
Sbjct: 377 YLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEK 436
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G V D + Y + S ++ Q+ + L E++++ G P+ + YN +I + GEV EA
Sbjct: 437 GVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEA 496
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
+ E+ + PD + Y +LI+ K+G+V AH F EM++K + PD V+Y++++
Sbjct: 497 INIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMEC 556
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
K ++ A+ LF EMLV G +P+ VTY L+ K G EA ++++M Q+GLTP+
Sbjct: 557 FGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Query: 460 VVTYTIL 466
+TYT+L
Sbjct: 617 SITYTVL 623
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 147/307 (47%), Gaps = 37/307 (12%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK--KRAIRVFREYPEVGVSWNTMSYNIVLH- 258
F+++++ G+ ++V N + L +GK +AI+VF E G N +Y+++L+
Sbjct: 293 FNEMITEGLTLNVVGYNTLMQVLA---KGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNL 349
Query: 259 -------------------------------SLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
+L +LG V EAH L M + S
Sbjct: 350 LVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS 409
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y ++ C G+ + ++++ ++ KG+ + +YN + L K ++ + +M
Sbjct: 410 YMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
K G PD Y LI+ F + G V A +F+E+++ PD +SY S+++ L K G +
Sbjct: 470 KDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVD 529
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
EAH F EM GL PD VTY+ L+ K + A+S+ +M+ KG PN+VTY IL+
Sbjct: 530 EAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Query: 468 DGLCKRG 474
D L K G
Sbjct: 590 DCLEKNG 596
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 38/278 (13%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++A +VF + + + +Y I++ ++ ++GK EA L +M G +VV Y +
Sbjct: 252 EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTL 311
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ + ++K +++ + G RPNEY Y+ +++LL G++V + V+ E++K
Sbjct: 312 MQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKR-- 368
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA-- 409
+ +Y+ L+ K G+VS AH+LF +M + + SY SML LC GK +EA
Sbjct: 369 YMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIE 428
Query: 410 ---------------------------------HKLFSEMLVMGLEPDEVTYTALIYGHC 436
H LF +M G PD TY LI
Sbjct: 429 MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ GE+ EA +I ++ + P++++Y L++ L K G
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 9/213 (4%)
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ +V+ + +++ GN+ V ++I + L+ L+L+++ L+ N +
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTV---NILIGFFGNTEDLQMCLRLVKKWD---LKMNSF 204
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y ++ ++ + +A V E+ + G D Y L+ K A ++F++M
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDM 261
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K++ D +YT M+ + +IGK EA LF+EM+ GL + V Y L+ K +
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A + ++MV+ G PN TY++L++ L G
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 132/234 (56%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F E G +T +YNIV+ C+ GKV +A+ LL +M+ G P VV+YG +I G
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+I +L++ L EE + K + N +Y+++ID K G + EA +L E+ + G+ P+
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
+ +L+ K+ ++ A F MK+ K P+ V+Y +++GLCK+ K +A + EM
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
G++P ++YT +I G KAG + EA ++ ++ G P+ Y +++GL
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 126/226 (55%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ SY+I++H L + G E + L M+ G V D +Y ++I G+C+ G++ K +L+
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
EE++ KG P Y ++ID L K + EA + E + + V+Y++LI GF K
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G + A+ + +E+ QK + P+ ++ S+L L K ++ EA F M + P++VTY
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
LI G CK + +AF +M ++G+ P+ ++YT ++ GL K G
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 131/254 (51%), Gaps = 4/254 (1%)
Query: 222 TRLCGNFEGKKRA---IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
T L G F + + +F++ E+G + ++ + G+V A +LL +M+
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
D+V Y V I + ++G+++ K E++ GL+P+E Y ++I +LCK + E
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A + + K+ P Y T+I G+ +G A+ L + + K +P ++Y +L
Sbjct: 292 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
L K+GK+ EA K+F EM P+ TY LI C+AG++ AF + + M + GL P
Sbjct: 352 CLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Query: 459 NVVTYTILVDGLCK 472
NV T I+VD LCK
Sbjct: 411 NVRTVNIMVDRLCK 424
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 143/300 (47%), Gaps = 39/300 (13%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
G + SV + N LT C GK A++VF E + + N +YNI++ LC+ GK+
Sbjct: 338 GSIPSVIAYNCILT--CLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLD 394
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
A L M+ G P+V + +++ C+ +L++ + EE+ K P+E + ++I
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK----------- 376
D L K G V +A +V +M +++VYT+LI F G HK
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 377 ------------------------LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
+F+E+K ++ VPD SY+ ++HGL K G E ++L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
F M G D Y +I G CK G++ +A+ + +M KG P VVTY ++DGL K
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 128/242 (52%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
K+ +++++ S + N + + + G+ ++ + +++ VPD SY +
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+I G + G + +L ++ +G + YN +ID CK G+V +A ++L EM G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
P V Y ++I G K + A+ LF+E K K+I + V Y+S++ G K+G++ EA+
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ E++ GL P+ T+ +L+ KA E+ EA M + TPN VTY IL++GL
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 471 CK 472
CK
Sbjct: 738 CK 739
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 123/239 (51%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +V+ + + N++ Y ++ + G+ ++ H + M PD+ +
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ G+ EK + EE++ + P+ Y+ +I L K G E + M + G
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y +I GFCK G V+ A++L +EMK K P V+Y S++ GL KI ++ EA+ LF
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
E +E + V Y++LI G K G + EA+ I +++QKGLTPN+ T+ L+D L K
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K++E ++++ M P +Y +I + + + +L L +++Q G P +++
Sbjct: 148 KLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFT 207
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I K G V A +L EM + D V+Y I F K G V A K F E++
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
+ PD V+YTSM+ LCK ++ EA ++F + P Y +I G+ AG+ EA
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+S+ + KG P+V+ Y ++ L K G
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMG 357
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 1/243 (0%)
Query: 233 RAIRVFREYPE-VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
RAI FR Y + SYN +L + + +L +M G P V + +
Sbjct: 80 RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEM 139
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G + +L + +++ +++ RP Y +I + ++M + G
Sbjct: 140 VLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY 199
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P ++TTLI GF K G V +A L DEMK + D V Y + K+GK+ A K
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
F E+ GL+PDEVTYT++I CKA + EA + + + P Y ++ G
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 472 KRG 474
G
Sbjct: 320 SAG 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
+L+ G+ ++ + N L L E A+ F+ E+ + N ++Y I+++ LC
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALV-KAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
++ K +A +M+ G P +SY +ISG + G + + L + + G P+
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
YN +I+ L ++A + E + G+
Sbjct: 799 CYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 194/430 (45%), Gaps = 36/430 (8%)
Query: 47 PDYSPRKPSIADADLVRHVSTTIKRRRSEPLRRVLKPFESKLNPHHLIW-VLINIKNDYV 105
PD +K +++ ++ + VST I R R + ++ F S L + L+ +N+ +
Sbjct: 38 PD--EQKSAVSYTEMAKTVST-IMRERQRWQQTLVSDFPSFDFADPLFFGELLKSQNNVL 94
Query: 106 LVLDFFNWARSRRD-KPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQF 164
L FF W S D P +L I+ + +K A++ + P
Sbjct: 95 FSLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKP----------- 143
Query: 165 TERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRL 224
P + + + + ++ L GI SV +CN + L
Sbjct: 144 -------------EPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCN---SVL 187
Query: 225 CGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV 282
G + +K R + +E E +++ ++ +LC G V E + LL Q G
Sbjct: 188 LGCLKARKLDRFWELHKEMVES--EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLD 245
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P Y +ISG+C+IG + +++ + P+ Y+Y II LC N + +EA +
Sbjct: 246 PGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCI 305
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
+ + G PD VVYTT+I GFC+ G + +A KL+ EM +K + P+ +Y M+HG K
Sbjct: 306 FKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFK 365
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
G++ ++EML G ++ +I G C G+ EAF I M + G+TPN +T
Sbjct: 366 RGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAIT 425
Query: 463 YTILVDGLCK 472
Y L+ G CK
Sbjct: 426 YNALIKGFCK 435
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
Query: 246 VSWNTMS----YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQL 301
++WN Y ++ LC K EA+ + ++ G PD V Y +I G+C+ G L
Sbjct: 275 IAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWL 334
Query: 302 EKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTL 361
KL E+ +KG+RPNE+ YN +I K GE+ E EM ++G + T+
Sbjct: 335 GSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTM 394
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
I GFC G A ++F M + + P+ ++Y +++ G CK K+ + KL+ E+ +GL
Sbjct: 395 IKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGL 454
Query: 422 EPDEVTYTALI 432
+P + Y AL+
Sbjct: 455 KPSGMAYAALV 465
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 70/144 (48%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +++ E + G+ N +YN+++H + G++ +M G ++S +I
Sbjct: 337 ARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIK 396
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C G+ ++ ++ + + G+ PN YN +I CK +V + ++ +E+ G+ P
Sbjct: 397 GFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKP 456
Query: 354 DNVVYTTLISGFCKSGNVSAAHKL 377
+ Y L+ S +V+ + L
Sbjct: 457 SGMAYAALVRNLKMSDSVATSLNL 480
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 140/246 (56%), Gaps = 12/246 (4%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
++++ G++ T ++N+++ +LC V A L +M G P+ ++G+++ GYC
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ G +K L+L+ ++ G+ PN+ +YN I+ C+ G ++E+++ +M + G+ PD V
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIV----PDFVSYTSMLHGLCKIGKMVEAHKL 412
+ + IS CK G V A ++F +M+ + + P+ ++Y ML G CK+G + +A L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 413 FSEMLVMGLEPDEV----TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
F + E D++ +Y + G + G+ EA ++ QM KG+ P++ +Y IL+D
Sbjct: 314 FESI----RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Query: 469 GLCKRG 474
GLCK G
Sbjct: 370 GLCKLG 375
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 139/270 (51%), Gaps = 5/270 (1%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
GI + NL + LC + A +F E PE G N ++ I++ C+ G +
Sbjct: 142 GIAPQTYTFNLLIRALC-DSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
LL ME G +P+ V Y I+S +C+ G+ + K++E+++ +GL P+ +N+ I
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260
Query: 329 LLCKNGEVVEAERVLREMTKHGVF----PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
LCK G+V++A R+ +M P+++ Y ++ GFCK G + A LF+ +++
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
+ SY L GL + GK +EA + +M G+ P +Y L+ G CK G + +A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+I M + G+ P+ VTY L+ G C G
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 155/326 (47%), Gaps = 19/326 (5%)
Query: 157 VHHLFDQFTERLIYTYKDWGAHP--LVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSV 214
LFD+ E+ G P F + + + + S+G++ +
Sbjct: 166 ARELFDEMPEK--------GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNK 217
Query: 215 DSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNL 272
N ++ C G + ++ + RE G+ + +++N + +LC+ GKV +A +
Sbjct: 218 VIYNTIVSSFCREGRNDDSEKMVEKMREE---GLVPDIVTFNSRISALCKEGKVLDASRI 274
Query: 273 LMQMEFCGNV----PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
ME + P+ ++Y +++ G+C++G LE L E ++ + YN +
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQ 334
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
L ++G+ +EAE VL++MT G+ P Y L+ G CK G +S A + MK+ + P
Sbjct: 335 GLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCP 394
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIH 448
D V+Y +LHG C +GK+ A L EM+ P+ T L++ K G + EA +
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 449 NQMVQKGLTPNVVTYTILVDGLCKRG 474
+M +KG + VT I+VDGLC G
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSG 480
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 138/268 (51%), Gaps = 21/268 (7%)
Query: 211 VVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
+ S+ S N++L L G F A V ++ + G+ + SYNI++ LC+LG + +
Sbjct: 323 LASLQSYNIWLQGLVRHGKF---IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSD 379
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
A ++ M+ G PD V+YG ++ GYC +G+++ L++E+ R PN Y N ++
Sbjct: 380 AKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLH 439
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
L K G + EAE +LR+M + G D V ++ G C SG + A ++ M+
Sbjct: 440 SLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR------ 493
Query: 389 DFVSYTSMLHGLCKIGKMVEAH-KLFSEMLVMG-LEPDEVTYTALIYGHCKAGEMREAFS 446
+HG +G + ++ L + L+ PD +TY+ L+ G CKAG EA +
Sbjct: 494 --------VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 447 IHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +M+ + L P+ V Y I + CK+G
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQG 573
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 156/300 (52%), Gaps = 30/300 (10%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGKK-RAIRVFR--EYPE-VGVSW-NTMSYNIVL 257
K+ G+V + + N ++ LC EGK A R+F E E +G+ N+++YN++L
Sbjct: 241 EKMREEGLVPDIVTFNSRISALCK--EGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 258 HSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLR 317
C++G +++A L + ++ + SY + + G + G+ + +++++ KG+
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
P+ Y YN ++D LCK G + +A+ ++ M ++GV PD V Y L+ G+C G V AA L
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 378 FDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
EM + +P+ + +LH L K+G++ EA +L +M G D VT ++ G C
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 438 AGEMREAFSI-----------------------HNQMVQKGLTPNVVTYTILVDGLCKRG 474
+GE+ +A I + +++ P+++TY+ L++GLCK G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 23/247 (9%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N + NI+LHSL ++G++ EA LL +M G D V+ +I+ G C G+L+K ++++
Sbjct: 430 NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 309 EELQRKGLR-----------------------PNEYVYNNIIDLLCKNGEVVEAERVLRE 345
+ ++ G P+ Y+ +++ LCK G EA+ + E
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAE 549
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M + PD+V Y I FCK G +S+A ++ +M++K +Y S++ GL +
Sbjct: 550 MMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQ 609
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ E H L EM G+ P+ TY I C+ ++ +A ++ ++M+QK + PNV ++
Sbjct: 610 IFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKY 669
Query: 466 LVDGLCK 472
L++ CK
Sbjct: 670 LIEAFCK 676
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 142/329 (43%), Gaps = 56/329 (17%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKK-----RAIRVFREYP--EVGVSW------ 248
K+ G + +CN+ + LCG+ E K + +RV +G S+
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 249 ---------NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIG 299
+ ++Y+ +L+ LC+ G+ EA NL +M PD V+Y + I +C+ G
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG 573
Query: 300 QLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYT 359
++ ++++++++KG + YN++I L ++ E ++ EM + G+ P+ Y
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633
Query: 360 TLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI---------------- 403
T I C+ V A L DEM QK I P+ S+ ++ CK+
Sbjct: 634 TAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI 693
Query: 404 ------------------GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
G++++A +L +L G E Y L+ CK E+ A
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753
Query: 446 SIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I ++M+ +G + ++DGL K G
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMG 782
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 127/298 (42%), Gaps = 57/298 (19%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN----------- 281
A + R+ E G +T++ NI++ LC G++ +A ++ M G+
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Query: 282 ------------VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDL 329
+PD+++Y +++G C+ G+ + L E+ + L+P+ YN I
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHH 568
Query: 330 LCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
CK G++ A RVL++M K G Y +LI G + H L DEMK+K I P+
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK------------ 437
+Y + + LC+ K+ +A L EM+ + P+ ++ LI CK
Sbjct: 629 ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Query: 438 ----------------------AGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
AG++ +A + ++ +G Y LV+ LCK+
Sbjct: 689 TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Query: 273 LMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK 332
L++ F N P V Y +++ + ++E V L +++ G+ P Y +N +I LC
Sbjct: 100 LVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD 159
Query: 333 NGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS 392
+ V A + EM + G P+ + L+ G+CK+G +L + M+ ++P+ V
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219
Query: 393 YTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMV 452
Y +++ C+ G+ ++ K+ +M GL PD VT+ + I CK G++ +A I + M
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 453 QK---GLT-PNVVTYTILVDGLCKRG 474
GL PN +TY +++ G CK G
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVG 305
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 34/181 (18%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+ E E G+S N +YN + LC+ KV++A NLL +M P+V S+ +I +C
Sbjct: 616 LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC 675
Query: 297 QI----------------------------------GQLEKVLKLMEELQRKGLRPNEYV 322
++ GQL K +L+E + +G ++
Sbjct: 676 KVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFL 735
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y ++++ LCK E+ A +L +M G D +I G K GN A+ D+M
Sbjct: 736 YKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Query: 383 Q 383
+
Sbjct: 796 E 796
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 151/276 (54%), Gaps = 6/276 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F+K+ + GI V + N ++ LC N+ A R+ + E ++ + + +N ++ +
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLC-NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 262 QLGKVKEAHNLLMQM---EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
+ GK+ EA L +M + C PDVV+Y +I G+C+ ++E+ +++ E+ ++GL
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHC--FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
N Y +I + + A+ V ++M GV PD + Y L+ G C +GNV A +F
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
+ M+++ + D V+YT+M+ LCK GK+ + LF + + G++P+ VTYT ++ G C+
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G EA ++ +M + G PN TY L+ + G
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 132/240 (55%), Gaps = 1/240 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + ++G + ++ N +L+ C ++ EA L+ QM G PD V++ ++
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G Q + + + L+E + KG +P+ Y +I+ LCK GE A +L +M K +
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V+Y T+I G CK ++ A LF++M+ K I PD +Y ++ LC G+ +A +L
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ-KGLTPNVVTYTILVDGLCK 472
S+ML + PD V + ALI K G++ EA ++++MV+ K P+VV Y L+ G CK
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 128/240 (53%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I + + +G+S N +Y+I ++ C+ ++ A +L +M G P +V+ +++G
Sbjct: 95 ISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNG 154
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
+C ++ + + L++++ G +P+ + ++ L ++ + EA ++ M G PD
Sbjct: 155 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V Y +I+G CK G A L ++M++ KI D V Y +++ GLCK M +A LF+
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+M G++PD TY LI C G +A + + M++K + P++V + L+D K G
Sbjct: 275 KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 114/208 (54%)
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K+ +A L M P +V + ++S ++ + + V+ L E++Q G+ N Y Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
I+ C+ ++ A +L +M K G P V +L++GFC +S A L D+M +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD V++T+++HGL + K EA L M+V G +PD VTY A+I G CK GE A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCK 472
++ N+M + + +VV Y ++DGLCK
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 123/236 (52%), Gaps = 6/236 (2%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R +P + + ++ +L ++ ++ K +L QM+ G ++ +Y + I+ +C+
Sbjct: 70 RPFPSI------VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRR 123
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
QL L ++ ++ + G P+ N++++ C + EA ++ +M + G PD V +
Sbjct: 124 SQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 183
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
TTL+ G + S A L + M K PD V+Y ++++GLCK G+ A L ++M
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+E D V Y +I G CK M +AF + N+M KG+ P+V TY L+ LC G
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 125/226 (55%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N + +L+ C++GK+ EA +L+QM G PD+V Y ++SGY G++ L+
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 310
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+++R+G PN Y +I LCK + EA +V EM ++ D V YT L+SGFCK
Sbjct: 311 RDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKW 370
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G + + + D+M +K ++P ++Y ++ K E +L +M + PD Y
Sbjct: 371 GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY 430
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+I CK GE++EA + N+M + GL+P V T+ I+++GL +G
Sbjct: 431 NVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
V++ + ++K +++++E+ + G P+EYV+ ++D LCK+G V +A ++ +M
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR 247
Query: 350 GVFPDNVVY-TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
FP N+ Y T+L+ G+C+ G + A + +M + PD V YT++L G GKM +
Sbjct: 248 --FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD 305
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
A+ L +M G EP+ YT LI CK M EA + +M + +VVTYT LV
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 469 GLCKRG 474
G CK G
Sbjct: 366 GFCKWG 371
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 127/244 (52%), Gaps = 3/244 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A + R+ G N Y +++ +LC++ +++EA + ++ME DVV+Y ++S
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C+ G+++K +++++ +KGL P+E Y +I+ K E ++ +M + P
Sbjct: 366 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 425
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D +Y +I CK G V A +L++EM++ + P ++ M++GL G ++EA F
Sbjct: 426 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 485
Query: 414 SEMLVMGL--EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP-NVVTYTILVDGL 470
EM+ GL T L+ K ++ A + + + KG NV+++TI + L
Sbjct: 486 KEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHAL 545
Query: 471 CKRG 474
+G
Sbjct: 546 FSKG 549
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 185/434 (42%), Gaps = 20/434 (4%)
Query: 60 DLVRHVSTTIKRRRS--EPLRRVLKPFESKLNPHHLIWVLINIKNDYVLVLDFFNWARSR 117
DLV +S + R+ + L L + +++ + + VL KN FF WAR
Sbjct: 36 DLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRI 95
Query: 118 RD-KPSLEALCIVLHIAVASNDLKMAQTLVFE-------------FWATPRLDVHHLFDQ 163
D SLE+ I++ I +S + + E FW R
Sbjct: 96 PDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPS 155
Query: 164 FTERLIYTYKDWGAHPLV--FDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFL 221
R ++G P V D F K +GIV S + ++ L
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI-L 214
Query: 222 TRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN 281
R A +VF E E + ++YN +L +LC+ G V + + +M G
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
PD S+ + I YC G + K+++ ++R L PN Y +N+II LCKN +V +A
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
+L EM + G PD Y ++++ C V+ A KL M + K +PD +Y +L L
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI 394
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC-KAGEMREAFSIHNQMVQKGLTPNV 460
+IG+ A +++ M P TYT +I+G K G++ EA M+ +G+ P
Sbjct: 395 RIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYS 454
Query: 461 VTYTILVDGLCKRG 474
T +L + L G
Sbjct: 455 TTVEMLRNRLVGWG 468
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 146/271 (53%), Gaps = 5/271 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCG--NFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F ++ G++ C + T + G N +A + F + G + + I++ +
Sbjct: 396 FQEIFELGLL---PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
+ G + +A ++ M+ G DVV+Y ++ GY + QL KV +L++E++ G+ P+
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
YN +I + G + EA ++ E+ + G P + +T +I GF K G+ A L+
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWF 572
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
M ++ PD V+ +++LHG CK +M +A LF+++L GL+PD V Y LI+G+C G
Sbjct: 573 YMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
++ +A + MVQ+G+ PN T+ LV GL
Sbjct: 633 DIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 149/272 (54%), Gaps = 8/272 (2%)
Query: 205 LLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
+LS G ++ +LF+ + C G F+ + + Y G+ + +++ + + LC+
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY---GIRPDIVAFTVFIDKLCK 318
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
G +KEA ++L +++ G D VS +I G+C++G+ E+ +KL+ + LRPN +V
Sbjct: 319 AGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFV 375
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y++ + +C G+++ A + +E+ + G+ PD V YTT+I G+C G A + F +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
+ P + T ++ + G + +A +F M GL+ D VTY L++G+ K ++
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ F + ++M G++P+V TY IL+ + RG
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 152/353 (43%), Gaps = 46/353 (13%)
Query: 161 FDQFTERLIYTYKDWGAHP--LVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCN 218
FD+ E L+ K +G P + F VF KL +GI S +
Sbjct: 287 FDKGWE-LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVS 345
Query: 219 LFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
+ C G E + I FR P N Y+ L ++C G + A + ++
Sbjct: 346 SVIDGFCKVGKPEEAIKLIHSFRLRP------NIFVYSSFLSNICSTGDMLRASTIFQEI 399
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
G +PD V Y +I GYC +G+ +K + L + G P+ +I + G +
Sbjct: 400 FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSI 459
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
+AE V R M G+ D V Y L+ G+ K+ ++ +L DEM+ I PD +Y +
Sbjct: 460 SDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMG-----------------------------------L 421
+H + G + EA+++ SE++ G +
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRM 579
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+PD VT +AL++G+CKA M +A + N+++ GL P+VV Y L+ G C G
Sbjct: 580 KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 32/207 (15%)
Query: 300 QLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYT 359
++ LKL ++ + G+ P+ V +++ + + + A + M G + V +
Sbjct: 216 KVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLS 275
Query: 360 TLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVM 419
I +C G +L MK I PD V++T + LCK G + EA + ++ +
Sbjct: 276 LFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335
Query: 420 GLEPDEVTYTALIYGHCKAGEMREAF--------------------------------SI 447
G+ D V+ +++I G CK G+ EA +I
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTI 395
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ + GL P+ V YT ++DG C G
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLG 422
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 146/271 (53%), Gaps = 5/271 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCG--NFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F ++ G++ C + T + G N +A + F + G + + I++ +
Sbjct: 396 FQEIFELGLL---PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
+ G + +A ++ M+ G DVV+Y ++ GY + QL KV +L++E++ G+ P+
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
YN +I + G + EA ++ E+ + G P + +T +I GF K G+ A L+
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWF 572
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
M ++ PD V+ +++LHG CK +M +A LF+++L GL+PD V Y LI+G+C G
Sbjct: 573 YMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
++ +A + MVQ+G+ PN T+ LV GL
Sbjct: 633 DIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 149/272 (54%), Gaps = 8/272 (2%)
Query: 205 LLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
+LS G ++ +LF+ + C G F+ + + Y G+ + +++ + + LC+
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY---GIRPDIVAFTVFIDKLCK 318
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
G +KEA ++L +++ G D VS +I G+C++G+ E+ +KL+ + LRPN +V
Sbjct: 319 AGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFV 375
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y++ + +C G+++ A + +E+ + G+ PD V YTT+I G+C G A + F +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
+ P + T ++ + G + +A +F M GL+ D VTY L++G+ K ++
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ F + ++M G++P+V TY IL+ + RG
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 152/353 (43%), Gaps = 46/353 (13%)
Query: 161 FDQFTERLIYTYKDWGAHP--LVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCN 218
FD+ E L+ K +G P + F VF KL +GI S +
Sbjct: 287 FDKGWE-LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVS 345
Query: 219 LFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
+ C G E + I FR P N Y+ L ++C G + A + ++
Sbjct: 346 SVIDGFCKVGKPEEAIKLIHSFRLRP------NIFVYSSFLSNICSTGDMLRASTIFQEI 399
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
G +PD V Y +I GYC +G+ +K + L + G P+ +I + G +
Sbjct: 400 FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSI 459
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
+AE V R M G+ D V Y L+ G+ K+ ++ +L DEM+ I PD +Y +
Sbjct: 460 SDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMG-----------------------------------L 421
+H + G + EA+++ SE++ G +
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRM 579
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+PD VT +AL++G+CKA M +A + N+++ GL P+VV Y L+ G C G
Sbjct: 580 KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 32/207 (15%)
Query: 300 QLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYT 359
++ LKL ++ + G+ P+ V +++ + + + A + M G + V +
Sbjct: 216 KVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLS 275
Query: 360 TLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVM 419
I +C G +L MK I PD V++T + LCK G + EA + ++ +
Sbjct: 276 LFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335
Query: 420 GLEPDEVTYTALIYGHCKAGEMREAF--------------------------------SI 447
G+ D V+ +++I G CK G+ EA +I
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTI 395
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ + GL P+ V YT ++DG C G
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLG 422
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 141/269 (52%), Gaps = 2/269 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F K++ G+V ++ N+ L C ++A ++ E E GV + +YN ++ C
Sbjct: 191 FKKMVKLGVVANIHVYNV-LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ EA ++ +ME G P++V+Y I G+ + G++ + +L E+ + + N
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHV 308
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y +ID C+ ++ EA R+ M G P V Y +++ C+ G + A++L EM
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
KKI PD ++ ++++ CKI MV A K+ +M+ GL+ D +Y ALI+G CK E+
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGL 470
A M++KG +P TY+ LVDG
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGF 457
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 130/243 (53%), Gaps = 9/243 (3%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV----VSYG 289
A+ V GV+ N ++YN +H + G+++EA L +++ DV V+Y
Sbjct: 257 ALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-----DDVTANHVTYT 311
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+I GYC++ +++ L+L E ++ +G P YN+I+ LC++G + EA R+L EM+
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
+ PDN+ TLI+ +CK ++ +A K+ +M + + D SY +++HG CK+ ++ A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ M+ G P TY+ L+ G + E + + ++GL +V Y L+
Sbjct: 432 KEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRR 491
Query: 470 LCK 472
+CK
Sbjct: 492 ICK 494
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 120/214 (56%), Gaps = 1/214 (0%)
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+ G + ++ + Q+ CG P + + V+++ + + V K+ +++ + G+ N
Sbjct: 144 AKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANI 203
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
+VYN ++ K+G+ +AE++L EM + GVFPD Y TLIS +CK A + D
Sbjct: 204 HVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDR 263
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M++ + P+ V+Y S +HG + G+M EA +LF E + + + VTYT LI G+C+ +
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMND 322
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ EA + M +G +P VVTY ++ LC+ G
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDG 356
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 36/274 (13%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
+I VF + G+ + + ++L+SL + + +M G V ++ Y V++
Sbjct: 152 SIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVH 211
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK--------------------- 332
+ G EK KL+ E++ KG+ P+ + YN +I + CK
Sbjct: 212 ACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAP 271
Query: 333 --------------NGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
G + EA R+ RE+ K V ++V YTTLI G+C+ ++ A +L
Sbjct: 272 NIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLR 330
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
+ M+ + P V+Y S+L LC+ G++ EA++L +EM +EPD +T LI +CK
Sbjct: 331 EVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKI 390
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+M A + +M++ GL ++ +Y L+ G CK
Sbjct: 391 EDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCK 424
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 115/230 (50%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+R+ G S ++YN +L LC+ G+++EA+ LL +M PD ++ +I+
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
YC+I + +K+ +++ GL+ + Y Y +I CK E+ A+ L M + G P
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
Y+ L+ GF KL +E +++ + D Y ++ +CK+ ++ A LF
Sbjct: 446 GYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLF 505
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
M GL D V +T + Y + + G++ EA ++ + M + L N+ Y
Sbjct: 506 ESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%), Gaps = 2/247 (0%)
Query: 229 EGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EG+ R A R+FRE + V+ N ++Y ++ C++ + EA L ME G P VV+
Sbjct: 286 EGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y I+ C+ G++ + +L+ E+ K + P+ N +I+ CK ++V A +V ++M
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
+ G+ D Y LI GFCK + A + M +K P + +Y+ ++ G K
Sbjct: 405 ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQD 464
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
E KL E GL D Y LI CK ++ A + M +KGL + V +T +
Sbjct: 465 EITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMA 524
Query: 468 DGLCKRG 474
+ G
Sbjct: 525 YAYWRTG 531
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
Y + G + + + E+++ GL+P+ +++ L K ++ ++M K GV +
Sbjct: 143 YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVAN 202
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
VY L+ KSG+ A KL EM++K + PD +Y +++ CK EA +
Sbjct: 203 IHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQD 262
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
M G+ P+ VTY + I+G + G MREA + + ++ +T N VTYT L+DG C+
Sbjct: 263 RMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCR 319
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 96/181 (53%), Gaps = 1/181 (0%)
Query: 216 SCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQ 275
+CN + C E A++V ++ E G+ + SY ++H C++ +++ A L
Sbjct: 379 TCNTLINAYC-KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Query: 276 MEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGE 335
M G P +Y ++ G+ + +++ KL+EE +++GL + +Y +I +CK +
Sbjct: 438 MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQ 497
Query: 336 VVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
V A+ + M K G+ D+V++TT+ + ++G V+ A LFD M ++++ + Y S
Sbjct: 498 VDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKS 557
Query: 396 M 396
+
Sbjct: 558 I 558
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
+V++ ++ K G + ++ V ++ G+ P T L++ K K+F +
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M + +V + Y ++H K G +A KL SEM G+ PD TY LI +CK
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
EA S+ ++M + G+ PN+VTY + G + G
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREG 287
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 141/271 (52%), Gaps = 1/271 (0%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
+++ G + + NL + CG K+A+ F + SYN +L+SL +
Sbjct: 174 EMVQDGFPTTARTFNLLICS-CGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGV 232
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
+ K + QM G PDV++Y +++ ++G++++ +L +E+ R G P+ Y Y
Sbjct: 233 KQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTY 292
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
N ++ +L K + + A L M + G+ P + YTTLI G ++GN+ A DEM +
Sbjct: 293 NILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVK 352
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
PD V YT M+ G G++ +A ++F EM V G P+ TY ++I G C AGE RE
Sbjct: 353 AGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFRE 412
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + +M +G PN V Y+ LV L K G
Sbjct: 413 ACWLLKEMESRGCNPNFVVYSTLVSYLRKAG 443
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 121/231 (52%), Gaps = 4/231 (1%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
V+++ E G S + ++YNI+L + +LGK+ L +M G PD +Y +++
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ + L + ++ G+ P+ Y +ID L + G + + L EM K G PD V
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
YT +I+G+ SG + A ++F EM K +P+ +Y SM+ GLC G+ EA L EM
Sbjct: 361 CYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG----LTPNVVTY 463
G P+ V Y+ L+ KAG++ EA + +MV+KG L P ++ Y
Sbjct: 421 ESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 98/188 (52%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
R R+F E G S ++ +YNI+LH L + K A L M+ G P V+ Y +I
Sbjct: 272 RFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLI 331
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
G + G LE ++E+ + G RP+ Y +I +GE+ +A+ + REMT G
Sbjct: 332 DGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL 391
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+ Y ++I G C +G A L EM+ + P+FV Y++++ L K GK+ EA K+
Sbjct: 392 PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKV 451
Query: 413 FSEMLVMG 420
EM+ G
Sbjct: 452 IREMVKKG 459
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 3/250 (1%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CG + K R+ E + G ++N+++ S + G K+A M+ + P
Sbjct: 162 CGEY---KAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPF 218
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
SY I++ + Q + + + +++ G P+ YN ++ + G++ +R+
Sbjct: 219 KHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFD 278
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
EM + G PD+ Y L+ K AA + MK+ I P + YT+++ GL + G
Sbjct: 279 EMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAG 338
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
+ EM+ G PD V YT +I G+ +GE+ +A + +M KG PNV TY
Sbjct: 339 NLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYN 398
Query: 465 ILVDGLCKRG 474
++ GLC G
Sbjct: 399 SMIRGLCMAG 408
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ EVG+ + + Y ++ L + G ++ L +M G PDVV Y V+I+
Sbjct: 308 ALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT 367
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
GY G+L+K ++ E+ KG PN + YN++I LC GE EA +L+EM G P
Sbjct: 368 GYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNP 427
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK----IVPDFVSY 393
+ VVY+TL+S K+G +S A K+ EM +K +VP + Y
Sbjct: 428 NFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
SY++++ + G+ K L+ +M G ++ ++I + G ++ + +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
+ RP ++ YN I++ L + E V ++M + G PD + Y L+ + G +
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
+LFDEM + PD +Y +LH L K K + A + M +G++P + YT L
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I G +AG + ++MV+ G P+VV YT+++ G G
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSG 373
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 131/228 (57%)
Query: 247 SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK 306
S N ++Y+ + + C+ G+++ A M+ P+VV++ +I GYC+ G LE +
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
L +E++R + N Y +ID CK GE+ AE + M + V P+++VYTT+I GF
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
+ G+ A K +M + + D +Y ++ GLC GK+ EA ++ +M L PD V
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+T ++ + K+G M+ A +++++++++G P+VV + ++DG+ K G
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG 387
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 132/257 (51%), Gaps = 30/257 (11%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A++ + G+ + +Y +++ LC GK+KEA ++ ME VPD+V + +++
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRP------------------------------NEYVY 323
Y + G+++ + + +L +G P N+ +Y
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMY 406
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
+ID LCK G+ +E ER+ ++++ G+ PD +YT+ I+G CK GN+ A KL M Q
Sbjct: 407 TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
+ ++ D ++YT++++GL G MVEA ++F EML G+ PD + LI + K G M
Sbjct: 467 EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAA 526
Query: 444 AFSIHNQMVQKGLTPNV 460
A + M ++GL V
Sbjct: 527 ASDLLLDMQRRGLVTAV 543
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 131/243 (53%), Gaps = 5/243 (2%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+RA ++ E V N++ Y ++ Q G A L +M G D+ +YGVI
Sbjct: 250 QRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVI 309
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
ISG C G+L++ +++E++++ L P+ ++ +++ K+G + A + ++ + G
Sbjct: 310 ISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGF 369
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD V +T+I G K+G + A F K ++ YT ++ LCK G +E +
Sbjct: 370 EPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM-----YTVLIDALCKEGDFIEVER 424
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
LFS++ GL PD+ YT+ I G CK G + +AF + +MVQ+GL +++ YT L+ GL
Sbjct: 425 LFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLA 484
Query: 472 KRG 474
+G
Sbjct: 485 SKG 487
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 131/260 (50%), Gaps = 37/260 (14%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
S+N V+ +C+LG+VK A +++ M G PDV+SY +I G+C+ G + ++E L
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 312 QR-------------------------------------KGLRPNEYVYNNIIDLLCKNG 334
+ K PN Y+ ID CK+G
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
E+ A + M + + P+ V +T LI G+CK+G++ A L+ EM++ ++ + V+YT
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK 454
+++ G CK G+M A +++S M+ +EP+ + YT +I G + G+ A +M+ +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 455 GLTPNVVTYTILVDGLCKRG 474
G+ ++ Y +++ GLC G
Sbjct: 298 GMRLDITAYGVIISGLCGNG 317
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 119/226 (52%), Gaps = 1/226 (0%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ +S+N + + ++ + E + M C + P+VV+Y I +C+ G+L+ LK
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCS-PNVVTYSTWIDTFCKSGELQLALKSF 186
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
++R L PN + +ID CK G++ A + +EM + + + V YT LI GFCK
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G + A +++ M + ++ P+ + YT+++ G + G A K ++ML G+ D Y
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+I G C G+++EA I M + L P++V +T +++ K G
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 45/250 (18%)
Query: 266 VKEAHNLLMQMEFCGNVPDVVSYG----VIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
V+EA L ++ N+PD + +I+ C I L K + L +G P+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSL----KFLAYLVSRGYTPHRS 57
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA------- 374
+N+++ +CK G+V AE ++ M + G PD + Y +LI G C++G++ +A
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 375 ---------------HKLFDEMKQKKIV---------------PDFVSYTSMLHGLCKIG 404
+ LF+ + K++ P+ V+Y++ + CK G
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
++ A K F M L P+ VT+T LI G+CKAG++ A S++ +M + ++ NVVTYT
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 465 ILVDGLCKRG 474
L+DG CK+G
Sbjct: 238 ALIDGFCKKG 247
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 121/200 (60%)
Query: 273 LMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK 332
+++M G PD+V+ +++G+C ++ + + ++++ G++ + V +ID LCK
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 333 NGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS 392
N VV A VL+ M G+ P+ V Y++LI+G CKSG ++ A + EM KKI P+ ++
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 393 YTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMV 452
+++++ K GK+ + ++ M+ M ++P+ TY++LIYG C + EA + + M+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 453 QKGLTPNVVTYTILVDGLCK 472
KG TPNVVTY+ L +G K
Sbjct: 181 SKGCTPNVVTYSTLANGFFK 200
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 132/239 (55%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V + + G+S N ++Y+ ++ LC+ G++ +A L +M+ P+V+++ +I
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Y + G+L KV + + + + + PN + Y+++I LC + V EA ++L M G P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ V Y+TL +GF KS V KL D+M Q+ + + VS +++ G + GK+ A +F
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
M GL P+ +Y ++ G GE+ +A S M + +++TYTI++ G+CK
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCK 305
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 140/271 (51%), Gaps = 1/271 (0%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
K++ GI + + + + C + K A+ V + ++G+ + + I++ +LC+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLS-NSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
V A +L +M+ G P+VV+Y +I+G C+ G+L + + E+ K + PN +
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
+ +ID K G++ + + V + M + + P+ Y++LI G C V A K+ D M
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
K P+ V+Y+++ +G K ++ + KL +M G+ + V+ LI G+ +AG++
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + M GL PN+ +Y I++ GL G
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANG 272
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 121/223 (54%), Gaps = 1/223 (0%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
V++ ++ + N +Y+ +++ LC +V EA +L M G P+VV+Y + +G+
Sbjct: 140 VYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFF 199
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ +++ +KL++++ ++G+ N N +I + G++ A V MT +G+ P+
Sbjct: 200 KSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIR 259
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
Y +++G +G V A F+ M++ + D ++YT M+HG+CK + EA+ LF ++
Sbjct: 260 SYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL 319
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
+EPD YT +I +AG EA ++ N+ QK + N
Sbjct: 320 KFKRVEPDFKAYTIMIAELNRAGMRTEADAL-NRFYQKHVRQN 361
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 35/179 (19%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
I++ + P+ GV+ NT+S N ++ Q GK+ A + M G +P++ SY ++++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G G++EK L E +Q+ T++ +
Sbjct: 267 GLFANGEVEKALSRFEHMQK---------------------------------TRNDL-- 291
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
D + YT +I G CK+ V A+ LF ++K K++ PDF +YT M+ L + G EA L
Sbjct: 292 DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV 266
G+ + SCN T + G F+ K A+ VF G+ N SYNIVL L G+V
Sbjct: 218 GVAANTVSCN---TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 274
Query: 267 KEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI 326
++A + M+ N D+++Y ++I G C+ +++ L +L+ K + P+ Y +
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 334
Query: 327 IDLLCKNGEVVEAERVLREMTKH 349
I L + G EA+ + R KH
Sbjct: 335 IAELNRAGMRTEADALNRFYQKH 357
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 148/269 (55%), Gaps = 4/269 (1%)
Query: 210 IVVSVDSCNLFLTRLCGNFE--GKKRAIRVFREYPEVG--VSWNTMSYNIVLHSLCQLGK 265
I+VS L + LC E KK + VFR +W+ + +++++ +LG
Sbjct: 122 ILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGL 181
Query: 266 VKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN 325
V+E + ++ G VV+ +++G ++ +E ++ + R G+ PN Y +N
Sbjct: 182 VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNI 241
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
+ ++ C + E + L +M + G PD V Y TL+S +C+ G + A L+ M +++
Sbjct: 242 LTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRR 301
Query: 386 IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
+VPD V+YTS++ GLCK G++ EAH+ F M+ G++PD ++Y LIY +CK G M+++
Sbjct: 302 VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 361
Query: 446 SIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ ++M+ + P+ T ++V+G + G
Sbjct: 362 KLLHEMLGNSVVPDRFTCKVIVEGFVREG 390
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 188/403 (46%), Gaps = 16/403 (3%)
Query: 77 LRRVLKPFESKLNPHHLIWVLINIKNDYVLVLDFFNWARSRRDK-PSLEALCIVLHIAVA 135
LR +K L + VL+ ++D + FF W + K P++ C++LHI V+
Sbjct: 66 LRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVS 125
Query: 136 SNDLKMAQTLVFEFWA----TPRLDVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXX 191
S +A + E +DV + T+ +W P+VFD+ +
Sbjct: 126 SKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDEC-----NWD--PVVFDMLVKGYLK 178
Query: 192 XXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTM 251
F ++L G VSV +CN L + + +V+ VG+ NT
Sbjct: 179 LGLVEEGFRVFREVLDSGFSVSVVTCN-HLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTY 237
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
++NI+ + C +E + L +ME G PD+V+Y ++S YC+ G+L++ L + +
Sbjct: 238 TFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIM 297
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
R+ + P+ Y ++I LCK+G V EA + M G+ PD + Y TLI +CK G +
Sbjct: 298 YRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMM 357
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE-PDEVTYTA 430
+ KL EM +VPD + ++ G + G+++ A E+ + ++ P EV
Sbjct: 358 QQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVC-DF 416
Query: 431 LIYGHCKAGEMREAFSIHNQMV-QKGLTPNVVTYTILVDGLCK 472
LI C+ G+ A + ++++ ++G TY L++ L +
Sbjct: 417 LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSR 459
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A + F + G+ + MSYN ++++ C+ G ++++ LL +M VPD + VI
Sbjct: 323 REAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVI 382
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL-REMTKHG 350
+ G+ + G+L + + EL+R + V + +I LC+ G+ A+ +L R + + G
Sbjct: 383 VEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEG 442
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
Y LI + + A L ++K + V D +Y +++ LC+IG+ EA
Sbjct: 443 HEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAE 502
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
L +EM ++PD AL+YG+CK + +A + + + + +Y LV +
Sbjct: 503 SLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAV 562
Query: 471 CKRG 474
C+ G
Sbjct: 563 CETG 566
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM-EFCGNVPDVVSYGVIISGYCQIGQL 301
+V + + + IV SLCQ GK A +LL ++ E G+ +Y +I + +
Sbjct: 406 KVDIPFEVCDFLIV--SLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAI 463
Query: 302 EKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTL 361
E+ L L +L+ + + Y +I LC+ G EAE ++ EM V PD+ + L
Sbjct: 464 EEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGAL 523
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG-KMVEAHKLFSEMLVMG 420
+ G+CK + A +L + + D SY S++ +C+ G +A +L M +G
Sbjct: 524 VYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLG 583
Query: 421 LEPDEVTYTALI 432
P+ +T LI
Sbjct: 584 FVPNRLTCKYLI 595
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 136/242 (56%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+ V++E + V +++ YN+++ LC G + A+ + M G PDV +Y +I
Sbjct: 283 QALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLI 342
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
S C+ G+ ++ L +Q G+ P++ Y II LC +G+V A L M K +
Sbjct: 343 SALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLL 402
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+ +++ +I G+ + G+ S+A + + M + P+ + +++HG K G++++A +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+EM + PD TY L+ C G +R AF ++++M+++G P+++TYT LV GLC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 473 RG 474
+G
Sbjct: 523 KG 524
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 145/277 (52%), Gaps = 9/277 (3%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
K++ G++ + + N L LC G E +A + RE E+G S N +SYN ++ LC
Sbjct: 146 KMIYSGVIPGLITHNHLLNGLCKAGYIE---KADGLVREMREMGPSPNCVSYNTLIKGLC 202
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQL-EKVLKLMEEL--QRKGLRP 318
+ V +A L M G P+ V+ +I+ CQ G + KL+EE+ + P
Sbjct: 203 SVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAP 262
Query: 319 NEYVYNNIIDLLC-KNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
+ V I+ C KNG VV+A V +EM++ V D+VVY +I G C SGN+ AA+
Sbjct: 263 LDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGF 322
Query: 378 FDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
+M ++ + PD +Y +++ LCK GK EA L M G+ PD+++Y +I G C
Sbjct: 323 MCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCI 382
Query: 438 AGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G++ A M++ L P V+ + +++DG + G
Sbjct: 383 HGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYG 419
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 121/223 (54%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
GV+ + +YN ++ +LC+ GK EA +L M+ G PD +SY VII G C G + +
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+ + + + L P ++N +ID + G+ A VL M +GV P+ LI G
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+ K G + A + +EM+ KI PD +Y +L C +G + A +L+ EML G +PD
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+TYT L+ G C G +++A S+ +++ G+T + V + IL
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILA 552
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 3/281 (1%)
Query: 171 TYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEG 230
+ K+ A +V++V + ++ G+ V + N ++ LC EG
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCK--EG 349
Query: 231 K-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
K A + GV+ + +SY +++ LC G V A+ L+ M +P+V+ +
Sbjct: 350 KFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWN 409
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
V+I GY + G L ++ + G++PN Y N +I K G +++A V EM
Sbjct: 410 VVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRST 469
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
+ PD Y L+ C G++ A +L+DEM ++ PD ++YT ++ GLC G++ +A
Sbjct: 470 KIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKA 529
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQ 450
L S + G+ D V + L + + EA+ ++ +
Sbjct: 530 ESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKK 570
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 47/276 (17%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS-YGVIISGYCQ 297
+E PE +N + Y I+ SL +L ++E+ ++ D +S + I+ C
Sbjct: 81 KEDPEA--IFNVLDY-ILKSSLDRLASLRESVCQTKSFDY----DDCLSIHSSIMRDLCL 133
Query: 298 IGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVV 357
G+L+ L L +++ G+ P +N++++ LCK G + +A+ ++REM + G P+ V
Sbjct: 134 QGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVS 193
Query: 358 YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC---------------- 401
Y TLI G C NV A LF+ M + I P+ V+ ++H LC
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI 253
Query: 402 -----------------------KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
K G +V+A +++ EM + D V Y +I G C +
Sbjct: 254 LDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSS 313
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G M A+ MV++G+ P+V TY L+ LCK G
Sbjct: 314 GNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEG 349
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 135/269 (50%), Gaps = 13/269 (4%)
Query: 211 VVSVDSCN-----LFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGK 265
++ + SCN LF+ C R +R + E+ YN +L SL + G
Sbjct: 84 ILMIKSCNSVRDALFVVDFC-------RTMRKGDSF-EIKYKLTPKCYNNLLSSLARFGL 135
Query: 266 VKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN 325
V+E L +M PD+ ++ +++GYC++G + + + + L + G P+ + Y +
Sbjct: 136 VEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTS 195
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
I C+ EV A +V +EMT++G + V YT LI G ++ + A L +MK
Sbjct: 196 FITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN 255
Query: 386 IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
P+ +YT ++ LC G+ EA LF +M G++PD+ YT LI C + EA
Sbjct: 256 CCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEAS 315
Query: 446 SIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ M++ GL PNV+TY L+ G CK+
Sbjct: 316 GLLEHMLENGLMPNVITYNALIKGFCKKN 344
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 1/239 (0%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
R++ E E VS + ++N +++ C+LG V EA + + G PD +Y I+G+
Sbjct: 141 RLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGH 200
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
C+ +++ K+ +E+ + G NE Y +I L + ++ EA +L +M P+
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV 260
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
YT LI C SG S A LF +M + I PD YT ++ C + EA L
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
ML GL P+ +TY ALI G CK + +A + ++M+++ L P+++TY L+ G C G
Sbjct: 321 MLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 110/194 (56%), Gaps = 1/194 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +VF+E + G N +SY +++ L + K+ EA +LL++M+ P+V +Y V+I
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C GQ + + L +++ G++P++ +Y +I C + EA +L M ++G+ P
Sbjct: 269 ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + Y LI GFCK NV A L +M ++ +VPD ++Y +++ G C G + A++L
Sbjct: 329 NVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLL 387
Query: 414 SEMLVMGLEPDEVT 427
S M GL P++ T
Sbjct: 388 SLMEESGLVPNQRT 401
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 136/270 (50%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F+K+L + N L L + ++A +F+ GV NT SYN+++ + C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ A+ L +M VPDV SY ++I G+C+ GQ+ ++L++++ KG P+
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRL 261
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y +++ LC+ ++ EA ++L M G PD V Y T+I GFC+ A K+ D+M
Sbjct: 262 SYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
P+ VSY +++ GLC G E K EM+ G P L+ G C G++
Sbjct: 322 LSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKV 381
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
EA + +++ G T + T+ +++ +C
Sbjct: 382 EEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 99/176 (56%)
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
G L+K +L + + G+ PN YN ++ C N ++ A ++ +M + V PD Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
LI GFC+ G V+ A +L D+M K VPD +SYT++L+ LC+ ++ EA+KL M +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G PD V Y +I G C+ +A + + M+ G +PN V+Y L+ GLC +G
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQG 344
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKN-GEVVEAERVLREM 346
+ +I Y + EKVL ++ P N I+D+L + G + +A + +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
HGV P+ Y L+ FC + ++S A++LF +M ++ +VPD SY ++ G C+ G++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
A +L +ML G PD ++YT L+ C+ ++REA+ + +M KG P++V Y +
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 467 VDGLCK 472
+ G C+
Sbjct: 302 ILGFCR 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 40/225 (17%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F K+L +V VDS + + C G G A+ + + G + +SY +L+S
Sbjct: 213 FGKMLERDVVPDVDSYKILIQGFCRKGQVNG---AMELLDDMLNKGFVPDRLSYTTLLNS 269
Query: 260 LCQLGKVKEAHNLLMQME-----------------FC------------------GNVPD 284
LC+ +++EA+ LL +M+ FC G P+
Sbjct: 270 LCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPN 329
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
VSY +I G C G ++ K +EE+ KG P+ V N ++ C G+V EA V+
Sbjct: 330 SVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVE 389
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
+ K+G + + +I C ++ +++I D
Sbjct: 390 VVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 434
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 128/229 (55%), Gaps = 1/229 (0%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ + ++ +I + SLC+ G+V EA +L+ ++ + PD +Y ++ C+ L V
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 305 LKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
+ ++E++ ++P+ + +ID +C + + EA ++ ++ G PD +Y T++
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
GFC S A ++ +MK++ + PD ++Y +++ GL K G++ EA M+ G EP
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP 333
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
D TYT+L+ G C+ GE A S+ +M +G PN TY L+ GLCK
Sbjct: 334 DTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 1/242 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV-PDVVSYGVII 292
A + +E E +T +YN +L LC+ + + + +M +V PD+VS+ ++I
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
C L + + L+ +L G +P+ ++YN I+ C + EA V ++M + GV
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD + Y TLI G K+G V A M PD +YTS+++G+C+ G+ + A L
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 357
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EM G P++ TY L++G CKA M + ++ M G+ Y LV L K
Sbjct: 358 LEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVK 417
Query: 473 RG 474
G
Sbjct: 418 SG 419
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 116/221 (52%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
V + +S+ I++ ++C ++EA L+ ++ G PD Y I+ G+C + + + +
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
+ ++++ +G+ P++ YN +I L K G V EA L+ M G PD YT+L++G
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
C+ G A L +EM+ + P+ +Y ++LHGLCK M + +L+ M G++ +
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES 405
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
Y L+ K+G++ EA+ + + V + Y+ L
Sbjct: 406 NGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 6/212 (2%)
Query: 266 VKEAHNLLMQMEFCGNVP-DVVSYGVIISGYCQIGQLEKVLKLMEEL--QRKGLRPNEYV 322
+ +A +L + +P D+ + ++ Y I + +KL + + + RP
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 323 YNNIIDLLCK--NGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
+ ++ C+ + + RVL M +G+ PD V + C++G V A L E
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML-VMGLEPDEVTYTALIYGHCKAG 439
+ +K PD +Y +L LCK + ++ EM ++PD V++T LI C +
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK 244
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+REA + +++ G P+ Y ++ G C
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 144/283 (50%), Gaps = 35/283 (12%)
Query: 220 FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
T LC + +A + ++GV Y ++ + C++ V++A +
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
VPD+ +Y ++I+ YC++ + ++ L E+++R+ ++P+ Y+ LL + E+
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSV---LLNSDPEL--- 683
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
+ REM V PD V YT +I+ +C ++ + LF +MK+++IVPD V+YT +L
Sbjct: 684 -DMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Query: 400 ----------------------------LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
CKIG + EA ++F +M+ G++PD YTAL
Sbjct: 743 KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 802
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I CK G ++EA I ++M++ G+ P+VV YT L+ G C+ G
Sbjct: 803 IACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNG 845
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 139/259 (53%), Gaps = 17/259 (6%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F L++ IV + + + + C K+A +F + V + ++Y+++L+S
Sbjct: 623 FEILVTKKIVPDLFTYTIMINTYC-RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDP 681
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+L +E ME +PDVV Y ++I+ YC + L+KV L ++++R+ + P+
Sbjct: 682 ELDMKRE-------MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVV 734
Query: 322 VYNNIIDLLCKNGEVVEAERVL-REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
Y +L KN + ER L REM V PD YT LI CK G++ A ++FD+
Sbjct: 735 TYT----VLLKN----KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQ 786
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M + + PD YT+++ CK+G + EA +F M+ G++PD V YTALI G C+ G
Sbjct: 787 MIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGF 846
Query: 441 MREAFSIHNQMVQKGLTPN 459
+ +A + +M++KG+ P
Sbjct: 847 VLKAVKLVKEMLEKGIKPT 865
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 123/280 (43%), Gaps = 40/280 (14%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
GNF A +F+E+ E +S + + YN+ +L +LGKV+EA L +M G PDV
Sbjct: 375 GNFS---EAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDV 431
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
++Y +I G C G+ LM E+ G P+ +YN + L NG EA L+
Sbjct: 432 INYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKM 491
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG- 404
M GV P V + +I G +G + A ++ ++ K D SM+ G C G
Sbjct: 492 MENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCAAGC 547
Query: 405 --------------------------------KMVEAHKLFSEMLVMGLEPDEVTYTALI 432
+ +A L M +G+EP++ Y LI
Sbjct: 548 LDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLI 607
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
C+ +R+A +V K + P++ TYTI+++ C+
Sbjct: 608 GAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCR 647
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%)
Query: 251 MSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEE 310
++Y V+ LC ++++A ++++ ME G PDV Y II G+ + + K + + +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 311 LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
+ +K R N + ++I+ C+ G EA + +E + + D V Y K G
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTA 430
V A +LF EM K I PD ++YT+++ G C GK +A L EM G PD V Y
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
L G G +EAF M +G+ P VT+ ++++GL G
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAG 515
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 150/362 (41%), Gaps = 102/362 (28%)
Query: 207 SYGIVVSVDSCNLFLTRLCGNFE-------GK-KRAIRVFREYPEVGVSWNTMSYNIVLH 258
+Y + N+ L R+C N GK + AI +FRE G++ + ++Y ++
Sbjct: 380 AYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIG 439
Query: 259 SLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV---------------------------- 290
C GK +A +L+++M+ G PD+V Y V
Sbjct: 440 GCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKP 499
Query: 291 -------IISGYCQIGQLEKVLKLMEELQRKGLRPNEY---------------------- 321
+I G G+L+K E L+ K R N+
Sbjct: 500 TYVTHNMVIEGLIDAGELDKAEAFYESLEHKS-RENDASMVKGFCAAGCLDHAFERFIRL 558
Query: 322 -------VYNNIIDLLCKNGEVV-EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
VY + LC + + +A+ +L M K GV P+ +Y LI +C+ NV
Sbjct: 559 EFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRK 618
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT------ 427
A + F+ + KKIVPD +YT M++ C++ + +A+ LF +M ++PD VT
Sbjct: 619 AREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN 678
Query: 428 ----------------------YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
YT +I +C ++++ +++ M ++ + P+VVTYT+
Sbjct: 679 SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTV 738
Query: 466 LV 467
L+
Sbjct: 739 LL 740
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 128/329 (38%), Gaps = 75/329 (22%)
Query: 221 LTRLCGNFEGKKRAIRVF-REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
L + N + AI +F R Y +G + + + N ++ + G+ ++E
Sbjct: 152 LVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERL 211
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNG----- 334
G D +Y +++ + E++ KL+ L R Y N I+ LC N
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIA 271
Query: 335 ----------------------------------EVVEAERVLREMTKHGVFPDNVVYTT 360
+ +AE V+ +M KHG+ PD VY+
Sbjct: 272 YFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSA 331
Query: 361 LISG-----------------------------------FCKSGNVSAAHKLFDEMKQKK 385
+I G +C+ GN S A+ LF E ++
Sbjct: 332 IIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETN 391
Query: 386 IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
I D V Y L K+GK+ EA +LF EM G+ PD + YT LI G C G+ +AF
Sbjct: 392 ISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAF 451
Query: 446 SIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +M G TP++V Y +L GL G
Sbjct: 452 DLMIEMDGTGKTPDIVIYNVLAGGLATNG 480
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 4/214 (1%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+ VF + + N + + +L CQ+G EA++L + D V Y V
Sbjct: 344 KAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAF 403
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
++G++E+ ++L E+ KG+ P+ Y +I C G+ +A ++ EM G
Sbjct: 404 DALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKT 463
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD V+Y L G +G A + M+ + + P +V++ ++ GL G++ +A
Sbjct: 464 PDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAF 523
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFS 446
+ + E D +++ G C AG + AF
Sbjct: 524 YESLEHKSREND----ASMVKGFCAAGCLDHAFE 553
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 132/240 (55%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +RE E G S N +++ +++ C+ ++ A + +M+ D+ +YG +I
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+C+ ++ L EL GL PN VYN++I G++ A + ++M G+
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D YTT+I G K GN++ A L+ E+ IVPD + + +++GL K G+ ++A K+
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM + P+ + Y+ +I GH + G + EAF +H++M++KG+ + + +LV G ++
Sbjct: 789 EEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 126/228 (55%)
Query: 247 SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK 306
S + SYN ++ ++G A +M G P+VV++ +I+G+C+ +++ L+
Sbjct: 587 SMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALE 646
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
+ E++ L+ + Y +ID CK ++ A + E+ + G+ P+ VY +LISGF
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
G + AA L+ +M I D +YT+M+ GL K G + A L+SE+L +G+ PDE+
Sbjct: 707 NLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEI 766
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ L+ G K G+ +A + +M +K +TPNV+ Y+ ++ G + G
Sbjct: 767 LHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG 814
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
C E + A+ +F + E ++ M I L C+ GKV A + L ME G P+
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL-FCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
VV Y ++ +C++ ++ + E+ KGL PN + Y+ +ID KN + A V+
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM-KQKKIVPDFVSYTSMLHGLCKI 403
+M + V+Y T+I+G CK G S A ++ + K+K+ SY S++ G K+
Sbjct: 544 QMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKV 603
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
G A + + EM G P+ VT+T+LI G CK+ M A + ++M L ++ Y
Sbjct: 604 GDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAY 663
Query: 464 TILVDGLCKRG 474
L+DG CK+
Sbjct: 664 GALIDGFCKKN 674
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 35/276 (12%)
Query: 234 AIRVFREY-PEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A+ + RE ++GV + +Y V+ + + G ++EA ++ +M G V++ ++
Sbjct: 293 ALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLV 352
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+GYC+ +L K L L ++ +GL P++ +++ +++ CKN E+ +A M +
Sbjct: 353 NGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIA 412
Query: 353 PDNVVYTTLISG----------------------------------FCKSGNVSAAHKLF 378
P +V+ T+I G FCK G V AA
Sbjct: 413 PSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFL 472
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
M+QK I P+ V Y +M+ C++ M A +FSEML GLEP+ TY+ LI G K
Sbjct: 473 KMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + A+ + NQM N V Y +++GLCK G
Sbjct: 533 KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 182/434 (41%), Gaps = 57/434 (13%)
Query: 85 ESKLNPHHLIWVLINIKNDYVLVLDFFNWARSRRDKPSLEALC-------IVLHIAVAS- 136
E+ ++ +I VL+ +ND V L + NW KP L LC +++HI ++S
Sbjct: 74 ENHVDDARVIEVLLGRRNDPVSALQYCNWV-----KP-LHRLCEGGDVFWVLIHILLSSI 127
Query: 137 -NDLKMAQTLVFEFWATPRLDVHHLFDQFTERLIYTYKDWGAH--PLVFDVFFQXXXXXX 193
+ + LV P L + + L+ + K +G P F+
Sbjct: 128 HTHDRASNLLVMFVSNNPTL----IPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNK 183
Query: 194 XXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSY 253
F ++ +V V N L+ L + A ++ + +GV+ + ++
Sbjct: 184 RMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRS-NLIDEAKEIYNKMVLIGVAGDNVTT 242
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
+++ + + K +EA + ++ G PD + + + + C+ L L L+ E++
Sbjct: 243 QLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRG 302
Query: 314 K-GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
K G+ ++ Y ++I K G + EA RV+ EM G+ + T+L++G+CK +
Sbjct: 303 KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELG 362
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A LF+ M+++ + PD V ++ M+ CK +M +A + + M + + P V +I
Sbjct: 363 KALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Query: 433 YG----------------------------------HCKAGEMREAFSIHNQMVQKGLTP 458
G CK G++ A S M QKG+ P
Sbjct: 423 QGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEP 482
Query: 459 NVVTYTILVDGLCK 472
NVV Y ++ C+
Sbjct: 483 NVVFYNNMMLAHCR 496
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 2/183 (1%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A +F E PE+G+ N YN ++ LGK+ A +L +M G D+ +Y +
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I G + G + L EL G+ P+E ++ +++ L K G+ ++A ++L EM K V
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ ++Y+T+I+G + GN++ A +L DEM +K IV D + ++ G ++ K A K
Sbjct: 797 TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG--RVEKPPAASK 854
Query: 412 LFS 414
+ S
Sbjct: 855 ISS 857
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 127/235 (54%), Gaps = 1/235 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+++F E G + S+N +L LC+ +V++A+ L + +V D V+Y VI+
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVIL 202
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+G+C I + K L++++E+ +G+ PN YN ++ + G++ A EM K
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
D V YTT++ GF +G + A +FDEM ++ ++P +Y +M+ LCK + A +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
F EM+ G EP+ TY LI G AGE + +M +G PN TY +++
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 1/223 (0%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
++ IV GK +A L + M G D+ S+ I+ C+ ++EK +L L
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
R + YN I++ C +A VL+EM + G+ P+ Y T++ GF ++G +
Sbjct: 188 -RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A + F EMK++ D V+YT+++HG G++ A +F EM+ G+ P TY A+
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I CK + A + +MV++G PNV TY +L+ GL G
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 34/226 (15%)
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
V D S+ + I ++ V L+ ++ + P+ + + + G+ +A +
Sbjct: 88 VHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVK 147
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF----------------------- 378
+ M +HG F D + T++ CKS V A++LF
Sbjct: 148 LFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCL 207
Query: 379 -----------DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
EM ++ I P+ +Y +ML G + G++ A + F EM E D VT
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
YT +++G AGE++ A ++ ++M+++G+ P+V TY ++ LCK+
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 137/239 (57%), Gaps = 1/239 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ F + G++ N ++ N L+SL + G+ +EA + ++ G VPD V+Y +++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Y ++G++++ +KL+ E+ G P+ V N++I+ L K V EA ++ M + + P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
V Y TL++G K+G + A +LF+ M QK P+ +++ ++ LCK ++ A K+
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+M+ MG PD TY +I+G K G+++EA +QM +K + P+ VT L+ G+ K
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVK 689
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 155/326 (47%), Gaps = 26/326 (7%)
Query: 160 LFDQFTERLIYTYKDWGAHPLV--FDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSC 217
LF++FT KD G P + +++ F ++ S G + V +
Sbjct: 771 LFEKFT-------KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATY 823
Query: 218 NLFLTRLCGNFEGKKRAI-RVFREYPEVGV---SWNTMSYNIVLHSLCQLGKVKEA---- 269
N L + GK I +F Y E+ NT+++NIV+ L + G V +A
Sbjct: 824 NFLL-----DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 270 HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDL 329
++L+ +F P +YG +I G + G+L + +L E + G RPN +YN +I+
Sbjct: 879 YDLMSDRDFS---PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 330 LCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
K GE A + + M K GV PD Y+ L+ C G V F E+K+ + PD
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVM-GLEPDEVTYTALIYGHCKAGEMREAFSIH 448
V Y +++GL K ++ EA LF+EM G+ PD TY +LI AG + EA I+
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 449 NQMVQKGLTPNVVTYTILVDGLCKRG 474
N++ + GL PNV T+ L+ G G
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSG 1081
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 126/243 (51%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
G K+A R+ E G N SYN ++H L + EA + +M G P + +Y
Sbjct: 168 GLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYS 227
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
++ G + ++ V+ L++E++ GL+PN Y + I +L + G++ EA +L+ M
Sbjct: 228 SLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE 287
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G PD V YT LI C + + A ++F++MK + PD V+Y ++L +
Sbjct: 288 GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 347
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ +SEM G PD VT+T L+ CKAG EAF + M +G+ PN+ TY L+ G
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Query: 470 LCK 472
L +
Sbjct: 408 LLR 410
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 130/249 (52%), Gaps = 4/249 (1%)
Query: 230 GKKRAIR----VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
GK+R I + +E +G+ N ++ I + L + GK+ EA+ +L +M+ G PDV
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
V+Y V+I C +L+ ++ E+++ +P+ Y ++D N ++ ++ E
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M K G PD V +T L+ CK+GN A D M+ + I+P+ +Y +++ GL ++ +
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ +A +LF M +G++P TY I + K+G+ A +M KG+ PN+V
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 466 LVDGLCKRG 474
+ L K G
Sbjct: 474 SLYSLAKAG 482
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 5/266 (1%)
Query: 209 GIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV 266
G V V + + + LC GNF + V R+ G+ N +YN ++ L ++ ++
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ---GILPNLHTYNTLICGLLRVHRL 414
Query: 267 KEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI 326
+A L ME G P +Y V I Y + G L+ E+++ KG+ PN N
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 327 IDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKI 386
+ L K G EA+++ + G+ PD+V Y ++ + K G + A KL EM +
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 387 VPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFS 446
PD + S+++ L K ++ EA K+F M M L+P VTY L+ G K G+++EA
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 447 IHNQMVQKGLTPNVVTYTILVDGLCK 472
+ MVQKG PN +T+ L D LCK
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCK 620
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 120/216 (55%), Gaps = 1/216 (0%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
+Y ++ L + G++ EA L M G P+ Y ++I+G+ + G+ + L + +
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
++G+RP+ Y+ ++D LC G V E +E+ + G+ PD V Y +I+G KS +
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRL 1012
Query: 372 SAAHKLFDEMKQKK-IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTA 430
A LF+EMK + I PD +Y S++ L G + EA K+++E+ GLEP+ T+ A
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
LI G+ +G+ A++++ MV G +PN TY L
Sbjct: 1073 LIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 120/226 (53%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ +++ I++ +LC+ G EA + L M G +P++ +Y +I G ++ +L+ L+L
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
++ G++P Y Y ID K+G+ V A +M G+ P+ V + K+
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G A ++F +K +VPD V+Y M+ K+G++ EA KL SEM+ G EPD +
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+LI KA + EA+ + +M + L P VVTY L+ GL K G
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 587
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 2/272 (0%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYP-EVGVSWNTMSYNIVLHSLC 261
+L++ GI DS + + R A +F ++ ++GV +YN+++ L
Sbjct: 737 ERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ ++ A ++ +Q++ G +PDV +Y ++ Y + G+++++ +L +E+ N
Sbjct: 797 EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTI 856
Query: 322 VYNNIIDLLCKNGEVVEAERVLRE-MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
+N +I L K G V +A + + M+ P Y LI G KSG + A +LF+
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M P+ Y +++G K G+ A LF M+ G+ PD TY+ L+ C G
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ E ++ + GL P+VV Y ++++GL K
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 110/198 (55%)
Query: 275 QMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNG 334
+ME G+VPDVV++ +++ C+ G + ++ ++ +G+ PN + YN +I L +
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
+ +A + M GV P Y I + KSG+ +A + F++MK K I P+ V+
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK 454
+ L+ L K G+ EA ++F + +GL PD VTY ++ + K GE+ EA + ++M++
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 455 GLTPNVVTYTILVDGLCK 472
G P+V+ L++ L K
Sbjct: 533 GCEPDVIVVNSLINTLYK 550
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 143/296 (48%), Gaps = 8/296 (2%)
Query: 155 LDVHHLFDQFTERLIYTYKDWGAHPLVFD--VFFQXXXXXXXXXXXXXXFHKLLSYGIVV 212
L VH L D L + G P + VF F K+ + GI
Sbjct: 409 LRVHRLDDAL--ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 466
Query: 213 SVDSCNLFLTRLCGNFEGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHN 271
++ +CN L L G+ R A ++F ++G+ ++++YN+++ ++G++ EA
Sbjct: 467 NIVACNASLYSLAK--AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 272 LLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLC 331
LL +M G PDV+ +I+ + ++++ K+ ++ L+P YN ++ L
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 332 KNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFV 391
KNG++ EA + M + G P+ + + TL CK+ V+ A K+ +M VPD
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 644
Query: 392 SYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
+Y +++ GL K G++ EA F +M + + PD VT L+ G KA + +A+ I
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKI 699
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A ++F + G N YNI+++ + G+ A L +M G PD+ +Y V++
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM-TKHGV 351
C +G++++ L +EL+ GL P+ YN II+ L K+ + EA + EM T G+
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD Y +LI +G V A K+++E+++ + P+ ++ +++ G GK A+
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 412 LFSEMLVMGLEPDEVTYTAL 431
++ M+ G P+ TY L
Sbjct: 1089 VYQTMVTGGFSPNTGTYEQL 1108
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 114/262 (43%), Gaps = 39/262 (14%)
Query: 250 TMSYNIVLHSLCQLGKVKEAHNL--LMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKL 307
T + N +L +L GK++E + LMQ D +Y I G L++
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKR--DTNTYLTIFKSLSVKGGLKQAPYA 175
Query: 308 MEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCK 367
+ +++ G N Y YN +I LL K+ EA V R M G P Y++L+ G K
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 368 SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
++ + L EM+ + P+ ++T + L + GK+ EA+++ M G PD VT
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 428 YTALIYGHCKAGEM---REAF--------------------------------SIHNQMV 452
YT LI C A ++ +E F ++M
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 453 QKGLTPNVVTYTILVDGLCKRG 474
+ G P+VVT+TILVD LCK G
Sbjct: 356 KDGHVPDVVTFTILVDALCKAG 377
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 185/413 (44%), Gaps = 27/413 (6%)
Query: 79 RVLKPFESKLNPHHLIWVLINIKNDYVLVLDFFNWARS----RRDKPSLEALCIVLHIAV 134
R L+P S P + + ++N+ L L FF + R D S L +L +
Sbjct: 62 RSLQP--SGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSR 119
Query: 135 ASNDLKMAQTLVFEFWATPRLDVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXX 194
+ L AT D + F LI +Y G+ P VFD+ +
Sbjct: 120 LKSHASEIIRLALRLAATDE-DEDRVLKVFRS-LIKSYNRCGSAPFVFDLLIKSCLDSKE 177
Query: 195 XXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFRE---YPEVGVSW--- 248
KL S GI + +CN +T + G +++RE +V V
Sbjct: 178 IDGAVMVMRKLRSRGINAQISTCNALITEV-SRRRGASNGYKMYREVFGLDDVSVDEAKK 236
Query: 249 -------NTMSYNIVLHSLCQLGKVKEAHNLLMQMEF-CGNVPDVVSYGVIISGYCQIGQ 300
N ++N ++ S + G+ + + +ME G P+V SY V++ YC G
Sbjct: 237 MIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGL 296
Query: 301 LEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTT 360
+ + K+ EE++ +G+ + YN +I LC N EVV+A+ + R+M G+ + Y
Sbjct: 297 MSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEH 356
Query: 361 LISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI---GKMVEAHKLFSEML 417
L++G+CK+G+V + ++ EMK+K D ++ +++ GLC ++VEA + + +
Sbjct: 357 LVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAV 416
Query: 418 VMGL-EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ P Y L+ C+ G+M A +I +MV KG P+ TY +DG
Sbjct: 417 REAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH-GVFPDNVVYTTLISGFCKSGNVSAA 374
++PN +N+++ + GE ER+ REM + G P+ Y L+ +C G +S A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
K+++EMK + +V D V+Y +M+ GLC ++V+A +LF +M + G+E +TY L+ G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 435 HCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+CKAG++ ++ +M +KG + +T LV+GLC
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 16/219 (7%)
Query: 270 HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDL 329
+L+ CG+ P V + ++I +++ + +M +L+ +G+ N +I
Sbjct: 149 RSLIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITE 206
Query: 330 LCKNGEVVEAERVLREMTK-------------HGVFPDNVVYTTLISGFCKSGNVSAAHK 376
+ + ++ RE+ + P+ + +++ F + G +
Sbjct: 207 VSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVER 266
Query: 377 LFDEMKQK-KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
++ EM+++ P+ SY ++ C G M EA K++ EM V G+ D V Y +I G
Sbjct: 267 IWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGL 326
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
C E+ +A + M KG+ +TY LV+G CK G
Sbjct: 327 CSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAG 365
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 127/231 (54%), Gaps = 1/231 (0%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ N ++YN ++ C G + +A ++ ME G P++ +YG +I+G+ + G L+
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+ + ++ G PN VY N+++ LC++ + EAE ++ M+K P + I G
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 365 FCKSGNVSAAHKLFDEMKQK-KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
C +G + A K+F +M+Q+ + P+ V+Y +L GL K ++ EA+ L E+ + G+E
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY L++G C AG A + +M+ G +P+ +T +++ CK+G
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 117/224 (52%), Gaps = 5/224 (2%)
Query: 251 MSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEE 310
+++ +++ L G+V LL QM+ G + +IS Y Q+G E+ +++
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 311 LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
++ G P+ +YN+++D L + V R+M + G P+ Y L+ CK+
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTA 430
V A KL EM K PD VSYT+++ +C++G + E +L EP Y A
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNA 251
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
LI G CK + + AF + +MV+KG++PNV++Y+ L++ LC G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 126/244 (51%), Gaps = 6/244 (2%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+RA+ +F E G + YN VL +L +++ + + M+ G P+V +Y V+
Sbjct: 128 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 187
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ C+ +++ KL+ E+ KG P+ Y +I +C+ G V E RE+ +
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----RELAER-F 242
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P VY LI+G CK + A +L EM +K I P+ +SY+++++ LC G++ A
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYTILVDGL 470
++ML G P+ T ++L+ G G +A + NQM++ GL PNVV Y LV G
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 471 CKRG 474
C G
Sbjct: 363 CSHG 366
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A + RE GV W++ +YN +LH C G A L+ +M G PD ++ +I
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 292 ISGYCQIGQLEKVLKLMEELQ--RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
I YC+ G+ E+ ++++ + R+ RP+ Y N+I LC++ + +L M
Sbjct: 570 ILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISA 629
Query: 350 GVFPDNVVYTTLISGF 365
G+ P ++ LI+ F
Sbjct: 630 GIVPSIATWSVLINCF 645
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 189/432 (43%), Gaps = 68/432 (15%)
Query: 108 LDFFNWARSRRDKPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQFTER 167
L FF+W ++ ++ ++L + +L +A+ +F V L D++
Sbjct: 85 LRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVK-LQDRYFNS 143
Query: 168 LIYTY----------------KDWGAHP--LVFDVFFQXXXXXXXXXXXXXXFHKLL-SY 208
LI +Y K G P L F+ F ++ +Y
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
G+ + N + C N A R+F++ + + ++YN ++ LC+ GKVK
Sbjct: 204 GVTPDSYTFNTLINGFCKN-SMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 269 AHNLLMQM-EFCGNV-PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI 326
AHN+L M + +V P+VVSY ++ GYC ++++ + + ++ +GL+PN YN +
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 327 I-------------DLL------------------------CKNGEVVEAERVLREMTKH 349
I D+L C G + A +V +EM
Sbjct: 323 IKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM 382
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV-------PDFVSYTSMLHGLCK 402
+ PD+ Y+ LI C A LF+E+ +K+++ P +Y M LC
Sbjct: 383 KLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCA 442
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
GK +A K+F +++ G++ D +Y LI GHC+ G+ + A+ + M+++ P++ T
Sbjct: 443 NGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLET 501
Query: 463 YTILVDGLCKRG 474
Y +L+DGL K G
Sbjct: 502 YELLIDGLLKIG 513
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 130/244 (53%), Gaps = 8/244 (3%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF----CGNVPDVVSYG 289
+R F G S S+ ++L L + + A N L +E C + D +
Sbjct: 84 GLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRY-FN 142
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK- 348
+I Y G ++ +KL + +++ G+ P+ +N+++ +L K G A + EM +
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
+GV PD+ + TLI+GFCK+ V A ++F +M+ PD V+Y +++ GLC+ GK+
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 409 AHKLFSEML--VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
AH + S ML + P+ V+YT L+ G+C E+ EA + + M+ +GL PN VTY L
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 467 VDGL 470
+ GL
Sbjct: 323 IKGL 326
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 8/223 (3%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
++NI++ + C G + A + +M PD SY V+I C + ++ L EL
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 312 QRKGL-------RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
K + +P YN + + LC NG+ +AE+V R++ K GV D Y TLI+G
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITG 473
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
C+ G A++L M +++ VPD +Y ++ GL KIG+ + AH ML P
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPV 533
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
T+ +++ K E+F + M++K + N+ T +V
Sbjct: 534 ATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVV 576
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 140/358 (39%), Gaps = 44/358 (12%)
Query: 159 HLFDQFTERLIY---TYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVD 215
H +D+ + LI + + F++ + F ++L+ +
Sbjct: 330 HRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSA 389
Query: 216 SCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWN-------TMSYNIVLHSLCQLGKVKE 268
S ++ + LC E RA +F E E V +YN + LC GK K+
Sbjct: 390 SYSVLIRTLCMRNEFD-RAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQ 448
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
A + Q+ G V D SY +I+G+C+ G+ + +L+ + R+ P+ Y +ID
Sbjct: 449 AEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLID 507
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
L K GE + A L+ M + P + ++++ K + + L M +K+I
Sbjct: 508 GLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQ 567
Query: 389 D--------------------------------FVSYTSMLHGLCKIGKMVEAHKLFSEM 416
+ V +L LC+ K+++AH L
Sbjct: 568 NIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFC 627
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
L D T +I G CK EAFS++N++V+ G + + +L + L G
Sbjct: 628 LEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAG 685
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 125/227 (55%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
R ++ G+ + SYN V+ LC+ +++ A L +M+ G P++V++ +SGY
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
G ++KV ++E+L G +P+ ++ II+ LC+ E+ +A +EM + G+ P+
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
+ Y LI C +G+ + KLF +MK+ + PD +Y + + CK+ K+ +A +L
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKT 590
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
ML +GL+PD TY+ LI ++G EA + + + + G P+ T
Sbjct: 591 MLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 115/239 (48%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
R+F + GV Y +++ +L + E L QM G + V SY +I
Sbjct: 376 RIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCL 435
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
C+ ++E + E+Q +G+ PN +N + G+V + VL ++ HG PD
Sbjct: 436 CKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDV 495
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
+ ++ +I+ C++ + A F EM + I P+ ++Y ++ C G + KLF++
Sbjct: 496 ITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAK 555
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
M GL PD Y A I CK ++++A + M++ GL P+ TY+ L+ L + G
Sbjct: 556 MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESG 614
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A V + E + + Y+ VL+ L KE L ++ G +PD ++ +
Sbjct: 303 KAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAM 362
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
S + L + ++ + +G++P Y ++ L E +R L++M G+
Sbjct: 363 SCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLL 422
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
Y +I CK+ + A EM+ + I P+ V++ + L G G + + H +
Sbjct: 423 SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGV 482
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
++LV G +PD +T++ +I C+A E+++AF +M++ G+ PN +TY IL+ C
Sbjct: 483 LEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCS 542
Query: 473 RG 474
G
Sbjct: 543 TG 544
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
G++ SV S N + LC + A+ E + G+S N +++N L G VK+
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAM-FLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK 478
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
H +L ++ G PDV+++ +II+ C+ +++ +E+ G+ PNE YN +I
Sbjct: 479 VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIR 538
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
C G+ + ++ +M ++G+ PD Y I FCK V A +L M + + P
Sbjct: 539 SCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP 598
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
D +Y++++ L + G+ EA ++FS + G PD T
Sbjct: 599 DNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 8/243 (3%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
++ + +E + G + +++ S +LG K +++ Q+ F G P Y +I
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ L+ ++++ G +P+ + YN +I +CK G V EA R++++M + G P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ YT LI GF +G V A K + M+ +K+ P+ + + +HG I + + K F
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG---IFRCLPPCKAF 305
Query: 414 SEMLVMGLEPDE----VTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
E+LV +E D V Y A++Y +E ++ ++G P+ T+ +
Sbjct: 306 -EVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSC 364
Query: 470 LCK 472
L K
Sbjct: 365 LLK 367
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 35/271 (12%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
VF + +G+ +T YN V+ +L + + A+ QM G PD +Y ++I G C
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ G +++ ++L+++++++G RPN + Y +ID G V EA + L M + P+
Sbjct: 227 KKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 357 VYTTLISG---------------------------------FCKSGNVSAAH--KLFDEM 381
T + G +C S N A + ++
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKI 346
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
++ +PD ++ + + L K +VE ++F + G++P Y L+ A
Sbjct: 347 GERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRF 406
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
E QM GL +V +Y ++D LCK
Sbjct: 407 SEGDRYLKQMGVDGLLSSVYSYNAVIDCLCK 437
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%)
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
G L ++L++E++ G R ++ + +I + G V +++ G+ P +Y
Sbjct: 124 GPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLY 183
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
+I KS ++ A+ F +M+ PD +Y ++HG+CK G + EA +L +M
Sbjct: 184 NAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQ 243
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
G P+ TYT LI G AG + EA M + L PN T V G+
Sbjct: 244 EGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGI 295
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%)
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
+ L + G ++ + +L+E+ G + + LI + + G + +F ++ +
Sbjct: 118 NALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 177
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
P Y +++ L K + A+ F +M G +PD TY LI+G CK G + EA +
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
QM Q+G PNV TYTIL+DG G
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAG 264
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++L +GI + + N+ L R C + R++++F + E G+S + +YN + S C
Sbjct: 518 FKEMLEWGIEPNEITYNI-LIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFC 576
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
++ KVK+A LL M G PD +Y +I + G+ + ++ ++R G P+ Y
Sbjct: 577 KMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSY 636
Query: 322 V 322
Sbjct: 637 T 637
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 116/217 (53%)
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
+V+ C K+K A +++++ME G DV + +I YC+ L + L ++++ K
Sbjct: 288 MVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGK 347
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
GL+ N + + I+ CK +EA +E +F D V Y K G V A
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
+L EMK + IVPD ++YT+++ G C GK+V+A L EM+ G+ PD +TY L+ G
Sbjct: 408 FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSG 467
Query: 435 HCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+ G E I+ +M +G PN VT +++++GLC
Sbjct: 468 LARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 185/445 (41%), Gaps = 80/445 (17%)
Query: 86 SKLNPHHLIWVLINIKNDYVLVLDFFNWARSRRDKPSLEALCIVLHIAVA-SNDLKMAQT 144
SKL H L +L + ++D L L F + P++ A ++ I D+K+
Sbjct: 52 SKLTQHGLQRLLNSTRDDPNLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSV 111
Query: 145 LVFEFWATPR----LDVHHLFDQFTER-------------LIYTYKDWGAHPLVFDVFFQ 187
LV R +D+ + + E L+ Y G DV FQ
Sbjct: 112 LVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQ 171
Query: 188 XXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVS 247
VV + +CN + R+ F + +F++ ++G+
Sbjct: 172 SK-----------------RLDCVVDIKACNFLMNRMT-EFGKIGMLMTLFKQLKQLGLC 213
Query: 248 WNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKL 307
N +Y IV+ +LC+ G ++EA LL++ E V Y I+G C G+ EK + L
Sbjct: 214 ANEYTYAIVVKALCRKGNLEEAAMLLIENE------SVFGYKTFINGLCVTGETEKAVAL 267
Query: 308 MEEL-QRKGLRPNE-------------------------------------YVYNNIIDL 329
+ EL RK L ++ Y +ID
Sbjct: 268 ILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDR 327
Query: 330 LCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
CKN + EA L +M G+ + V+ + ++ +CK A + F E + I D
Sbjct: 328 YCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLD 387
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
V Y L K+G++ EA +L EM G+ PD + YT LI G+C G++ +A + +
Sbjct: 388 RVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLID 447
Query: 450 QMVQKGLTPNVVTYTILVDGLCKRG 474
+M+ G++P+++TY +LV GL + G
Sbjct: 448 EMIGNGMSPDLITYNVLVSGLARNG 472
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 20/255 (7%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
++ + ++ G N ++ ++++ LC KVKEA + +E P+ +
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE--QKCPE--NKAS 529
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+ GYC+ G +K K L+ LR + VY + LC G + +A VL++M+ +
Sbjct: 530 FVKGYCEAGLSKKAYKAFVRLEYP-LRKS--VYIKLFFSLCIEGYLEKAHDVLKKMSAYR 586
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
V P + +I FCK NV A LFD M ++ ++PD +YT M+H C++ ++ +A
Sbjct: 587 VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAE 646
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCK-----------AGEM--REAFSIHNQMVQKGLT 457
LF +M G++PD VTYT L+ + K GE+ R+A + + G+
Sbjct: 647 SLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIG 706
Query: 458 PNVVTYTILVDGLCK 472
+VV YT+L+D CK
Sbjct: 707 LDVVCYTVLIDRQCK 721
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 117/243 (48%), Gaps = 4/243 (1%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A V E E+G + + V+ C+ + EA L +M G + V +I
Sbjct: 300 KAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLI 359
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ YC++ + L+ +E + + + YN D L K G V EA +L+EM G+
Sbjct: 360 LQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGI 419
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD + YTTLI G+C G V A L DEM + PD ++Y ++ GL + G E +
Sbjct: 420 VPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE 479
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
++ M G +P+ VT + +I G C A +++EA + + QK N ++ V G C
Sbjct: 480 IYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK-CPENKASF---VKGYC 535
Query: 472 KRG 474
+ G
Sbjct: 536 EAG 538
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 20/243 (8%)
Query: 232 KRAIRVF--REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
K+A + F EYP Y + SLC G +++AH++L +M P G
Sbjct: 541 KKAYKAFVRLEYP-----LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCG 595
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+I +C++ + + L + + +GL P+ + Y +I C+ E+ +AE + +M +
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Query: 350 GVFPDNVVYTTLISGFCK-----------SGNVSA--AHKLFDEMKQKKIVPDFVSYTSM 396
G+ PD V YT L+ + K G V A ++ E I D V YT +
Sbjct: 656 GIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVL 715
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
+ CK+ + +A +LF M+ GLEPD V YT LI + + G + A ++ ++ +K
Sbjct: 716 IDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYN 775
Query: 457 TPN 459
P+
Sbjct: 776 IPS 778
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 224 LCGNFEGK-------KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
+CG G + A +F E G+ + +Y I++H+ C+L ++++A +L M
Sbjct: 593 MCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDM 652
Query: 277 EFCGNVPDVVSYGVIISGYCQI-----------GQL--EKVLKLMEELQRKGLRPNEYVY 323
+ G PDVV+Y V++ Y ++ G++ K +++ E G+ + Y
Sbjct: 653 KQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCY 712
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
+ID CK + +A + M G+ PD V YTTLIS + + G + A L E+ +
Sbjct: 713 TVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSK 772
Query: 384 KKIVP 388
K +P
Sbjct: 773 KYNIP 777
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
GK++A V RE+ G+ + + Y +++ C++ +++A L +M G PD+V+Y
Sbjct: 689 GKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYT 748
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+IS Y + G ++ + L+ EL +K P+E
Sbjct: 749 TLISSYFRKGYIDMAVTLVTELSKKYNIPSE 779
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 136/243 (55%), Gaps = 2/243 (0%)
Query: 234 AIRVFREYPEVGVSW-NTMSYNIVLHSLCQLGKVKEAHNLLMQM-EFCGNVPDVVSYGVI 291
A V E G+S+ N+++Y+ ++ L + KEA L M G PD V++ V+
Sbjct: 215 AFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVM 274
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I+G+C+ G++E+ K+++ +++ G PN Y Y+ +++ CK G++ EA++ E+ K G+
Sbjct: 275 INGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGL 334
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
D V YTTL++ FC++G A KL EMK + D ++Y +L GL G+ EA +
Sbjct: 335 KLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQ 394
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+ + G+ ++ +Y ++ C GE+ +A + M ++G+ P+ T+ LV LC
Sbjct: 395 MLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLC 454
Query: 472 KRG 474
+ G
Sbjct: 455 ESG 457
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 114/207 (55%), Gaps = 9/207 (4%)
Query: 270 HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLR-PNEYVYNNIID 328
HNL +Q P+ + +++ +C+ G + ++EE++R G+ PN Y+ ++D
Sbjct: 188 HNLGLQ-------PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMD 240
Query: 329 LLCKNGEVVEAERVLREM-TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
L + EA + +M +K G+ PD V + +I+GFC++G V A K+ D MK+
Sbjct: 241 CLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCN 300
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
P+ +Y+++++G CK+GK+ EA + F E+ GL+ D V YT L+ C+ GE EA +
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
+M + +TY +++ GL G
Sbjct: 361 LGEMKASRCRADTLTYNVILRGLSSEG 387
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 170/370 (45%), Gaps = 26/370 (7%)
Query: 107 VLDFFNWARS-RRDKPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQFT 165
V++ FN + R KPSL A+ L++ + S ++ +++ L
Sbjct: 143 VMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKL-------------------- 182
Query: 166 ERLIYTYKDWGAHP--LVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTR 223
L+Y + G P +F++ + ++ GI L
Sbjct: 183 --LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMD 240
Query: 224 LCGNFEGKKRAIRVFREY-PEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV 282
K A+ +F + + G+S + +++N++++ C+ G+V+ A +L M+ G
Sbjct: 241 CLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCN 300
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P+V +Y +++G+C++G++++ + +E+++ GL+ + Y +++ C+NGE EA ++
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
L EM D + Y ++ G G A ++ D+ + + + SY +L+ LC
Sbjct: 361 LGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCC 420
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
G++ +A K S M G+ P T+ L+ C++G + ++ GL P +
Sbjct: 421 NGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKS 480
Query: 463 YTILVDGLCK 472
+ +V+ +CK
Sbjct: 481 WGAVVESICK 490
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 99/186 (53%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A + F E + G+ +T+ Y +++ C+ G+ EA LL +M+ D ++Y VI
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVI 379
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G G+ E+ L+++++ +G+ N+ Y I++ LC NGE+ +A + L M++ G+
Sbjct: 380 LRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
+P + + L+ C+SG ++ + ++P S+ +++ +CK K+V +
Sbjct: 440 WPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFE 499
Query: 412 LFSEML 417
L ++
Sbjct: 500 LLDSLV 505
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
Q+KG N Y+ ++D L ++ + + + +L +M ++ L+ F +S
Sbjct: 81 QQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLH 140
Query: 372 SAAHKLFDEMKQ-KKIVPDFVSYTSMLHGLCKIGKMVEAHKLF-SEMLVMGLEPDEVTYT 429
++F+ ++ ++ P + ++ L+ L G++ + KL +GL+P+ +
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFN 200
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLT-PNVVTYTILVDGL 470
L+ HCK G++ AF + +M + G++ PN +TY+ L+D L
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
+ +++E E G+ ++++V+ LC+ GK+ E + + M G+ P+V Y V+I G
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
Y + G +E ++L+ + +G +P+ Y+ +++ LCKNG V EA G+ +
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
++ Y++LI G K+G V A +LF+EM +K D Y +++ K K+ EA LF
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 415 EM-LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
M G + TYT L+ G K EA + + M+ KG+TP + L GLC
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Query: 474 G 474
G
Sbjct: 552 G 552
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 35/271 (12%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
V+R+ E G+ +YN +++ L V A + ME PD+V+Y +I GYC
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYC 268
Query: 297 QIGQLEKVLK-----------------------------------LMEELQRKGLRPNEY 321
+ GQ +K ++ L +E+ KG++ +
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH 328
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
++ +I LCK G++ E V M + G P+ +YT LI G+ KSG+V A +L M
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ PD V+Y+ +++GLCK G++ EA F GL + + Y++LI G KAG +
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EA + +M +KG T + Y L+D K
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 121/221 (54%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N ++ S +LG V+E + +M+ G P + +Y +++G ++ ++ E ++
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
++P+ YN +I CK G+ +A LR+M G D + Y T+I + +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
L+ EM +K I +++ ++ GLCK GK+ E + +F M+ G +P+ YT LI
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G+ K+G + +A + ++M+ +G P+VVTY+++V+GLCK G
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 122/242 (50%), Gaps = 2/242 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
AIR+ + G + ++Y++V++ LC+ G+V+EA + F G + + Y +I
Sbjct: 381 AIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLID 440
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM-TKHGVF 352
G + G++++ +L EE+ KG + Y YN +ID K+ +V EA + + M + G
Sbjct: 441 GLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCD 500
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
YT L+SG K A KL+D M K I P + ++ GLC GK+ A K+
Sbjct: 501 QTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKI 560
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
E+ MG+ D +I CKAG ++EA + + + ++G T++++ L K
Sbjct: 561 LDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRK 619
Query: 473 RG 474
G
Sbjct: 620 VG 621
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM-EFCGNVPDVVSYGVII 292
A+++F E + V +++ ++H LC+ +VKEA + M + G P V Y +I
Sbjct: 171 ALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLI 230
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
CQIG+L KL +E ++ + +Y+ +I L K G E +L EM++ G
Sbjct: 231 KALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCK 290
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD V Y LI+GFC + +A+++ DEM +K + PD +SY +L +I K EA L
Sbjct: 291 PDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYL 350
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
F +M G PD ++Y + G C+ + EA I ++M+ KG P + LC+
Sbjct: 351 FEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCE 410
Query: 473 RG 474
G
Sbjct: 411 SG 412
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 132/246 (53%), Gaps = 6/246 (2%)
Query: 227 NFEGK----KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV 282
NF G+ RA+ +F E P+ S N +L +L + G++++ L ++ G
Sbjct: 91 NFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGK- 149
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
PD +Y ++I G Q G + LKL +E+ +K ++P + +I LCK+ V EA ++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 343 LREMTK-HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
+M K +GV P +Y +LI C+ G +S A KL DE + KI D Y++++ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
K G+ E + EM G +PD VTY LI G C + A + ++MV+KGL P+V+
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 462 TYTILV 467
+Y +++
Sbjct: 330 SYNMIL 335
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Query: 332 KNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFV 391
K GE+ + + L + + G PD Y LI G +SG A KLFDEM +KK+ P V
Sbjct: 130 KCGELEKMKERLSSIDEFGK-PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 392 SYTSMLHGLCKIGKMVEAHKLFSEML-VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQ 450
++ +++HGLCK ++ EA K+ +ML V G+ P Y +LI C+ GE+ AF + ++
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE 248
Query: 451 MVQKGLTPNVVTYTILVDGLCKRG 474
+ + + Y+ L+ L K G
Sbjct: 249 AYEGKIKVDAAIYSTLISSLIKAG 272
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 122/223 (54%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
SYN +LHSL + + K + QM G PDV++Y +++ ++G+ +++ +L++E+
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM 283
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
+ G P+ Y YN ++ L + + A +L M + GV P + +TTLI G ++G +
Sbjct: 284 VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A DE + PD V YT M+ G G++ +A ++F EM G P+ TY ++
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I G C AG+ +EA ++ +M +G PN V Y+ LV+ L G
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAG 446
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
V+ + E G + + ++YNIV+ + +LGK + LL +M G PD+ +Y +++
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ L L+ ++ G+ P + +ID L + G++ + + E K G PD V
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
YT +I+G+ G + A ++F EM +K +P+ +Y SM+ G C GK EA L EM
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
G P+ V Y+ L+ AG++ EA + MV+KG
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
R R+ E + G S + +YNI+LH L K A NLL M G P V+ + +I
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
G + G+LE M+E + G P+ Y +I GE+ +AE + +EMT+ G
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+ Y ++I GFC +G A L EM+ + P+FV Y+++++ L GK++EAH++
Sbjct: 395 PNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEV 454
Query: 413 FSEMLVMG 420
+M+ G
Sbjct: 455 VKDMVEKG 462
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 3/250 (1%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CG + K R+ E + G ++N+++ + + G ++ ++ + P
Sbjct: 165 CGEY---KAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPY 221
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
SY I+ + Q + + + E++ G P+ YN ++ + G+ R+L
Sbjct: 222 KHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLD 281
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
EM K G PD Y L+ AA L + M++ + P + +T+++ GL + G
Sbjct: 282 EMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAG 341
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
K+ E + +G PD V YT +I G+ GE+ +A + +M +KG PNV TY
Sbjct: 342 KLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYN 401
Query: 465 ILVDGLCKRG 474
++ G C G
Sbjct: 402 SMIRGFCMAG 411
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
Y++++ + G+ K L+ +M G ++ ++I + G V++ + +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
RP ++ YN I+ L + + V +M + G PD + Y ++ + G
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
++L DEM + PD +Y +LH L K + A L + M +G+EP + +T LI
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G +AG++ ++ V+ G TP+VV YT+++ G G
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGG 376
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
++ R Y+ ++ + + GE R++ EM K G + LI C G
Sbjct: 145 QENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAG 201
Query: 373 AAHKLFDEMKQKKIV---PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYT 429
A + ++ + K P SY ++LH L + + ++ +ML G PD +TY
Sbjct: 202 LARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYN 261
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+++ + + G+ + + ++MV+ G +P++ TY IL+
Sbjct: 262 IVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILL 299
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 123/241 (51%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +FRE E G N +S+N ++ GK++E + +M G + +++
Sbjct: 247 ALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVD 306
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G C+ G+++ L+ +L K + P+E+ Y ++++ LC + V A ++ E+ K G P
Sbjct: 307 GLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ TTL+ G KSG A ++M I+PD V++ +L LC +A++L
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLR 426
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
G EPDE TY L+ G K G +E + N+M+ K + P++ TY L+DGL
Sbjct: 427 LLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCT 486
Query: 474 G 474
G
Sbjct: 487 G 487
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
Query: 292 ISGYCQIGQLEKVLKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
I YC+ +++ L + ++R +PN VYN +++ K+G++ +A R + M K
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
PD + LI+G+C+S A LF EMK+K P+ VS+ +++ G GK+ E
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
K+ EM+ +G E T L+ G C+ G + +A + ++ K + P+ Y LV+ L
Sbjct: 284 KMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKL 343
Query: 471 C 471
C
Sbjct: 344 C 344
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P+V Y +++GY + G ++K L+ + + ++ +P+ +N +I+ C++ + A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
REM + G P+ V + TLI GF SG + K+ EM + + ++ GLC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
G++ +A L ++L + P E Y +L+ C + A + ++ +KG TP +
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 463 YTILVDGLCKRG 474
T LV+GL K G
Sbjct: 371 CTTLVEGLRKSG 382
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ +++ E E+G ++ + I++ LC+ G+V +A L++ + +P YG +
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ C + + +++MEEL +KG P +++ L K+G +A + +M G+
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD+V + L+ C S + + A++L K PD +Y ++ G K G+ E
Sbjct: 400 LPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEV 459
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
L +EML + PD TY L+ G G+
Sbjct: 460 LVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV-VYTTLISGFCKSGNVSAAHKLF 378
E ++ + ID C+ ++ A M + NV VY T+++G+ KSG++ A + +
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
M +++ PD ++ +++G C+ K A LF EM G EP+ V++ LI G +
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G++ E + +M++ G + T ILVDGLC+ G
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREG 312
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
++++ G S +C + + LC EG+ A + + V + Y ++ LC
Sbjct: 287 YEMIELGCRFSEATCEILVDGLCR--EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLC 344
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
K A ++ ++ G P ++ ++ G + G+ EK ME++ G+ P+
Sbjct: 345 GENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSV 404
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+N ++ LC + +A R+ + G PD Y L+SGF K G L +EM
Sbjct: 405 TFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEM 464
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGK 405
K ++PD +Y ++ GL GK
Sbjct: 465 LDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 220 FLTRLCGNFEGKK-RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
+ +LCG E K RA+ + E + G + ++ ++ L + G+ ++A + +M
Sbjct: 339 LVEKLCG--ENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
G +PD V++ +++ C +L KG P+E Y+ ++ K G E
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
E ++ EM + PD Y L+ G +G S
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 133/272 (48%), Gaps = 1/272 (0%)
Query: 203 HKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
K+ S GI + N +T C + A +VF E G S++ ++YN +L +
Sbjct: 268 EKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
+ KEA +L +M G P +V+Y +IS Y + G L++ ++L ++ KG +P+ +
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y ++ + G+V A + EM G P+ + I + G + K+FDE+
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
+ PD V++ ++L + G E +F EM G P+ T+ LI + + G
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A +++ +M+ G+TP++ TY ++ L + G
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 4/249 (1%)
Query: 229 EGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
EG+ A +F E G S + SY ++ + G+ +EA N+ +ME G P +++
Sbjct: 186 EGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLIT 245
Query: 288 YGVIISGYCQIGQ-LEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV-VEAERVLRE 345
Y VI++ + ++G K+ L+E+++ G+ P+ Y YN +I CK G + EA +V E
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEE 304
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M G D V Y L+ + KS A K+ +EM P V+Y S++ + G
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ EA +L ++M G +PD TYT L+ G +AG++ A SI +M G PN+ T+
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 466 LVDGLCKRG 474
+ RG
Sbjct: 425 FIKMYGNRG 433
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 133/245 (54%), Gaps = 3/245 (1%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV-KEAHNLLMQMEFCGNVPDVVSYGV 290
+ A+ VF++ E G ++YN++L+ ++G + +L+ +M+ G PD +Y
Sbjct: 225 REAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNT 284
Query: 291 IISGYCQIGQL-EKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+I+ C+ G L ++ ++ EE++ G ++ YN ++D+ K+ EA +VL EM +
Sbjct: 285 LIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN 343
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G P V Y +LIS + + G + A +L ++M +K PD +YT++L G + GK+ A
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+F EM G +P+ T+ A I + G+ E I +++ GL+P++VT+ L+
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 470 LCKRG 474
+ G
Sbjct: 464 FGQNG 468
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 138/268 (51%), Gaps = 5/268 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRL--CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F ++ G V ++ N ++ CG+FE +A+ V+R + GV+ + +YN VL +
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFE---QAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
L + G +++ +L +ME P+ ++Y ++ Y ++ + L EE+ + P
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
+ ++ + K + EAER E+ + G PD +++S + + V+ A+ + D
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLD 653
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
MK++ P +Y S+++ + ++ ++ E+L G++PD ++Y +IY +C+
Sbjct: 654 YMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNT 713
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILV 467
MR+A I ++M G+ P+V+TY +
Sbjct: 714 RMRDASRIFSEMRNSGIVPDVITYNTFI 741
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 120/236 (50%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A++V E G S + ++YN ++ + + G + EA L QM G PDV +Y +
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+SG+ + G++E + + EE++ G +PN +N I + G+ E ++ E+ G+
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD V + TL++ F ++G S +F EMK+ VP+ ++ +++ + G +A
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
++ ML G+ PD TY ++ + G ++ + +M PN +TY L+
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 114/234 (48%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ + + E G + +Y +L + GKV+ A ++ +M G P++ ++ I
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Y G+ +++K+ +E+ GL P+ +N ++ + +NG E V +EM + G P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + TLIS + + G+ A ++ M + PD +Y ++L L + G ++ K+
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+EM +P+E+TY +L++ + E+ S+ ++ + P V LV
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 3/255 (1%)
Query: 222 TRLCGNFE--GK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
T L FE GK + A+ +F E G N ++N + GK E + ++
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
CG PD+V++ +++ + Q G +V + +E++R G P +N +I + G +
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A V R M GV PD Y T+++ + G + K+ EM+ + P+ ++Y S+LH
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
++ H L E+ +EP V L+ K + EA +++ ++G +P
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 459 NVVTYTILVDGLCKR 473
++ T +V +R
Sbjct: 628 DITTLNSMVSIYGRR 642
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + G ++ + N F+ ++ GN +++F E G+S + +++N +L
Sbjct: 407 FEEMRNAGCKPNICTFNAFI-KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
Q G E + +M+ G VP+ ++ +IS Y + G E+ + + + G+ P+
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN ++ L + G ++E+VL EM P+ + Y +L+ + + H L +E+
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
I P V +++ K + EA + FSE+ G PD T +++ + + +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILV 467
+A + + M ++G TP++ TY L+
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLM 671
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 100/190 (52%), Gaps = 2/190 (1%)
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
+++ S C L + EA +++ G PD+ + ++S Y + + K +++ ++ +
Sbjct: 601 VLVCSKCDL--LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
G P+ YN+++ + ++ + ++E +LRE+ G+ PD + Y T+I +C++ + A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
++F EM+ IVPD ++Y + + EA + M+ G P++ TY +++ G
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Query: 435 HCKAGEMREA 444
+CK EA
Sbjct: 779 YCKLNRKDEA 788
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 38/223 (17%)
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+IIS + G++ + LQ G + Y Y ++I +G EA V ++M +
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 349 ------------------------------------HGVFPDNVVYTTLISGFCKSGNV- 371
G+ PD Y TLI+ CK G++
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLH 295
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A ++F+EMK D V+Y ++L K + EA K+ +EM++ G P VTY +L
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I + + G + EA + NQM +KG P+V TYT L+ G + G
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 221 LTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCG 280
L +C + A R F E E G S + + N ++ + V +A+ +L M+ G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 281 NVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAE 340
P + +Y ++ + + K +++ E+ KG++P+ YN +I C+N + +A
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGL 400
R+ EM G+ PD + Y T I + A + M + P+ +Y S++ G
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Query: 401 CKIGKMVEAHKLFSEML 417
CK+ + EA KLF E L
Sbjct: 780 CKLNRKDEA-KLFVEDL 795
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 2/179 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F +L G + + N ++ + G + +A V E G + + +YN +++
Sbjct: 617 FSELKERGFSPDITTLNSMVS-IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHS 675
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ ++ +L ++ G PD++SY +I YC+ ++ ++ E++ G+ P+
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
YN I + EA V+R M KHG P+ Y +++ G+CK A KLF E
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA-KLFVE 793
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
DN V +IS K G VS+A +F+ +++ D SYTS++ G+ EA +F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGE-MREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+M G +P +TY ++ K G + S+ +M G+ P+ TY L+ CK
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCK 290
Query: 473 RG 474
RG
Sbjct: 291 RG 292
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 141/276 (51%), Gaps = 7/276 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSL- 260
FHK+ S+ V ++ S N + L N E +K A F ++ + N++S+NI++
Sbjct: 139 FHKITSFDCVRTIQSLNTLINVLVDNGELEK-AKSFFDGAKDMRLRPNSVSFNILIKGFL 197
Query: 261 --CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
C + + +++ME P VV+Y +I C+ + K L+E++ +K +RP
Sbjct: 198 DKCDWEAACKVFDEMLEMEV---QPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRP 254
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
N + ++ LC GE EA++++ +M G P V Y L+S K G + A L
Sbjct: 255 NAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLL 314
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
EMK+++I PD V Y +++ LC ++ EA+++ +EM + G +P+ TY +I G C+
Sbjct: 315 GEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ ++ N M+ P T+ +V GL K G
Sbjct: 375 EDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGG 410
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 133/269 (49%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
+L+ Y V +S + L + G +AI VF + S N +++ L
Sbjct: 105 RLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDN 164
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
G++++A + + P+ VS+ ++I G+ E K+ +E+ ++P+ Y
Sbjct: 165 GELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTY 224
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
N++I LC+N ++ +A+ +L +M K + P+ V + L+ G C G + A KL +M+
Sbjct: 225 NSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEY 284
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
+ P V+Y ++ L K G++ EA L EM ++PD V Y L+ C + E
Sbjct: 285 RGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPE 344
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
A+ + +M KG PN TY +++DG C+
Sbjct: 345 AYRVLTEMQMKGCKPNAATYRMMIDGFCR 373
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)
Query: 220 FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
FLT L E + A+ +F +Y E+G + SY+ +++ L + +L + +
Sbjct: 52 FLTDL-KEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYR 110
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
+ +I Y + G ++K + + ++ N +I++L NGE+ +A
Sbjct: 111 NVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKA 170
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
+ + P++V + LI GF + AA K+FDEM + ++ P V+Y S++
Sbjct: 171 KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGF 230
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
LC+ M +A L +M+ + P+ VT+ L+ G C GE EA + M +G P
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 460 VVTYTILVDGLCKRG 474
+V Y IL+ L KRG
Sbjct: 291 LVNYGILMSDLGKRG 305
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 1/248 (0%)
Query: 221 LTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
L R+ GN G+ RAI + P+ G ++ S+N +L+ L E H + +
Sbjct: 137 LMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL 196
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G D ++I G C+ G LE L+L++E ++ RPN ++ +I C G+ EA
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
++L M K + PD + + LISG K G V L + MK K P+ +Y +L+G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
L + +EA ++ S+M+ G+ P ++Y ++ G C+ + E + QMV G P
Sbjct: 317 LLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPK 376
Query: 460 VVTYTILV 467
+ + +V
Sbjct: 377 TLMWWKVV 384
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 42/205 (20%)
Query: 212 VSVDSC--NLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
V +D+C N+ + LC GN E A+++ E+P+ N M+++ ++ C GK +
Sbjct: 198 VEIDACCLNILIKGLCESGNLEA---ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFE 254
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
EA LL +ME PD +++ ++ISG + G++E+ + L+E ++ KG PN Y ++
Sbjct: 255 EAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL 314
Query: 328 --------DL---------------------------LCKNGEVVEAERVLREMTKHGVF 352
+L LC+ VVE + VLR+M HG
Sbjct: 315 YGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV 374
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKL 377
P +++ ++ N + L
Sbjct: 375 PKTLMWWKVVQCVVSKNNDDSQANL 399
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLME--ELQRKGLRPNEYVYNNIIDLLCKNGEVVEAE 340
P Y ++I+ + Q +++ ++M +L+++ E+ YN + G + A
Sbjct: 93 PTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAI 152
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGL 400
+L M G +P + + +++ + HK+F + + D ++ GL
Sbjct: 153 EILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGL 212
Query: 401 CKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
C+ G + A +L E P+ +T++ LI G C G+ EAF + +M ++ + P+
Sbjct: 213 CESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDT 272
Query: 461 VTYTILVDGLCKRG 474
+T+ IL+ GL K+G
Sbjct: 273 ITFNILISGLRKKG 286
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
G A+ F + + GV N ++Y ++H+ C + V++A +M G PD Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+ISG CQ+ + ++++E+L+ G + YN +I L C + +L +M K
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G PD++ Y TLIS F K + + ++ ++M++ + P +Y +++ C +G++ EA
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 410 HKLFSEM-LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
KLF +M L + P+ V Y LI K G +A S+ +M K + PNV TY L
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 125/267 (46%), Gaps = 40/267 (14%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM---EFCGNVPDVVSYGVIISGYCQIGQLE 302
+ +++ +N ++ LC++G++KEA LL++M E C VP+ V+Y +I GYC+ G+LE
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC--VPNAVTYNCLIDGYCRAGKLE 423
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+++ ++ ++PN N I+ +C++ + A +M K GV + V Y TLI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA------------- 409
C NV A +++M + PD Y +++ GLC++ + +A
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 410 ----------------------HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
+++ ++M G +PD +TY LI K + +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
QM + GL P V TY ++D C G
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVG 630
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 138/284 (48%), Gaps = 42/284 (14%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEA--------------------- 269
+++ I + + GVS N++ + SLC+ + A
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 270 --------------HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
++L+++M+ PDVV+ G++I+ C+ ++++ L++ E+++ K
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 316 ------LRPNEYVYNNIIDLLCKNGEVVEAERVLREMT-KHGVFPDNVVYTTLISGFCKS 368
++ + +N +ID LCK G + EAE +L M + P+ V Y LI G+C++
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G + A ++ MK+ +I P+ V+ +++ G+C+ + A F +M G++ + VTY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
LI+ C + +A + +M++ G +P+ Y L+ GLC+
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
G E K + +E + N ++ N ++ +C+ + A M ME G +
Sbjct: 419 AGKLETAKEVVSRMKEDE---IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
VV+Y +I C + +EK + E++ G P+ +Y +I LC+ +A RV+
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
++ + G D + Y LI FC N +++ +M+++ PD ++Y +++ K
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM-VQKGLTPNVVTY 463
++ +M GL+P TY A+I +C GE+ EA + M + + PN V Y
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 464 TILVDGLCKRG 474
IL++ K G
Sbjct: 656 NILINAFSKLG 666
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 46/270 (17%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV--PDVVSYGVIISGYCQIGQL--EKV 304
N+ N+V+ L + G V +A +L +M +V P+ ++ +++ + L EK+
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKI 243
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH--------------- 349
+ L+ G+ PN I LCKN A +L ++ K+
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 350 --------------------GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK---- 385
+ PD V LI+ CKS V A ++F++M+ K+
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 386 --IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM-LVMGLEPDEVTYTALIYGHCKAGEMR 442
I D + + +++ GLCK+G++ EA +L M L P+ VTY LI G+C+AG++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
A + ++M + + PNVVT +V G+C+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 36/184 (19%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD--------- 284
AIRV + E G S + ++YN+++ C ++ + +L ME G PD
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 285 --------------------------VVSYGVIISGYCQIGQLEKVLKLMEELQ-RKGLR 317
V +YG +I YC +G+L++ LKL +++ +
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
PN +YN +I+ K G +A + EM V P+ Y L + KL
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 378 FDEM 381
DEM
Sbjct: 710 MDEM 713
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 227 NFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV-PDV 285
+FE +R + RE G+ +Y V+ + C +G++ EA L M V P+
Sbjct: 596 DFESVERMMEQMRED---GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
V Y ++I+ + ++G + L L EE++ K +RPN YN + L + + +++ E
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 346 MTKHGV 351
M +H V
Sbjct: 713 MVEHLV 718
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 125/227 (55%), Gaps = 1/227 (0%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N + NI++ + C K++EA N++ +M+ G PDVV++ + Y +IG ++
Sbjct: 459 NDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI 518
Query: 309 -EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCK 367
+ ++PN I++ C+ G++ EA R M + GV P+ V+ +LI GF
Sbjct: 519 IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
Query: 368 SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
++ ++ D M++ + PD V+++++++ +G M +++++ML G++PD
Sbjct: 579 INDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHA 638
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ L G+ +AGE +A I NQM + G+ PNVV YT ++ G C G
Sbjct: 639 FSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 139/257 (54%), Gaps = 3/257 (1%)
Query: 216 SCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQ 275
+CN+ + C N + A + + GV + +++N + + ++G A ++++
Sbjct: 462 TCNILVQAWC-NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 520
Query: 276 MEFCGNV-PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNG 334
V P+V + G I++GYC+ G++E+ L+ ++ G+ PN +V+N++I
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
++ V+ M + GV PD V ++TL++ + G++ +++ +M + I PD +++
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ- 453
+ G + G+ +A ++ ++M G+ P+ V YT +I G C AGEM++A ++ +M
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700
Query: 454 KGLTPNVVTYTILVDGL 470
GL+PN+ TY L+ G
Sbjct: 701 VGLSPNLTTYETLIWGF 717
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 238 FREYPEVGVSWNTMSYNI-----VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
R +P V S T ++ +++ L + G+ +EAH++ + G+ P +++Y ++
Sbjct: 302 LRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLV 361
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+ + +L L+ ++++ GL+P+ ++N II+ ++G + +A ++ +M + G
Sbjct: 362 TALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCK 421
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEM-KQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P + TLI G+ K G + + +L D M + + + P+ + ++ C K+ EA
Sbjct: 422 PTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWN 481
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFS-IHNQMVQKGLTPNVVTYTILVDGL 470
+ +M G++PD VT+ L + + G A I +M+ + PNV T +V+G
Sbjct: 482 IVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGY 541
Query: 471 CKRG 474
C+ G
Sbjct: 542 CEEG 545
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
E GV + ++++ ++++ +G +K + M G PD+ ++ ++ GY + G+ E
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK-HGVFPDNVVYTTL 361
K +++ ++++ G+RPN +Y II C GE+ +A +V ++M G+ P+ Y TL
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
I GF ++ A +L +M+ K +VP + + G IG
Sbjct: 714 IWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
G A+ F + + GV N ++Y ++H+ C + V++A +M G PD Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+ISG CQ+ + ++++E+L+ G + YN +I L C + +L +M K
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKE 575
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G PD++ Y TLIS F K + + ++ ++M++ + P +Y +++ C +G++ EA
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 410 HKLFSEM-LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
KLF +M L + P+ V Y LI K G +A S+ +M K + PNV TY L
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 40/267 (14%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM---EFCGNVPDVVSYGVIISGYCQIGQLE 302
+ +++ +N ++ LC++G++KEA LL++M E C P+ V+Y +I GYC+ G+LE
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCA--PNAVTYNCLIDGYCRAGKLE 423
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+++ ++ ++PN N I+ +C++ + A +M K GV + V Y TLI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA------------- 409
C NV A +++M + PD Y +++ GLC++ + +A
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 410 ----------------------HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
+++ ++M G +PD +TY LI K + +
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
QM + GL P V TY ++D C G
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVG 630
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 139/289 (48%), Gaps = 42/289 (14%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEA---------------- 269
G +++ I + + GVS N++ + SLC+ + A
Sbjct: 235 GRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEA 294
Query: 270 -------------------HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEE 310
++L+++M+ PDVV+ G++I+ C+ ++++ L++ E+
Sbjct: 295 PPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEK 354
Query: 311 LQRKG------LRPNEYVYNNIIDLLCKNGEVVEAERVLREMT-KHGVFPDNVVYTTLIS 363
++ K ++ + +N +ID LCK G + EAE +L M + P+ V Y LI
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLID 414
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
G+C++G + A ++ MK+ +I P+ V+ +++ G+C+ + A F +M G++
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ VTY LI+ C + +A + +M++ G +P+ Y L+ GLC+
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
G E K + +E + N ++ N ++ +C+ + A M ME G +
Sbjct: 419 AGKLETAKEVVSRMKEDE---IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
VV+Y +I C + +EK + E++ G P+ +Y +I LC+ +A RV+
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
++ + G D + Y LI FC N +++ +M+++ PD ++Y +++ K
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM-VQKGLTPNVVTY 463
++ +M GL+P TY A+I +C GE+ EA + M + + PN V Y
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 464 TILVDGLCKRG 474
IL++ K G
Sbjct: 656 NILINAFSKLG 666
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 48/271 (17%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV--PDVVSYGVIISGYCQIGQL---EK 303
N+ N+V+ L + G V +A +L +M +V P+ ++ +++ + G+L EK
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWK-GRLLTEEK 242
Query: 304 VLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH-------------- 349
++ L+ G+ PN I LCKN A +L ++ K+
Sbjct: 243 IIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLS 302
Query: 350 ---------------------GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK--- 385
+ PD V LI+ CKS V A ++F++M+ K+
Sbjct: 303 CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDD 362
Query: 386 ---IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM-LVMGLEPDEVTYTALIYGHCKAGEM 441
I D + + +++ GLCK+G++ EA +L M L P+ VTY LI G+C+AG++
Sbjct: 363 GNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKL 422
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
A + ++M + + PNVVT +V G+C+
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 36/216 (16%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD--------- 284
AIRV + E G S + ++YN+++ C ++ + +L ME G PD
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 285 --------------------------VVSYGVIISGYCQIGQLEKVLKLMEELQ-RKGLR 317
V +YG +I YC +G+L++ LKL +++ +
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
PN +YN +I+ K G +A + EM V P+ Y L + KL
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 378 FDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
DEM ++ P+ ++ ++ L ++V+ K
Sbjct: 710 MDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
G A+ F + + GV N ++Y ++H+ C + V++A +M G PD Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+ISG CQ+ + ++++E+L+ G + YN +I L C + +L +M K
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G PD++ Y TLIS F K + + ++ ++M++ + P +Y +++ C +G++ EA
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 410 HKLFSEM-LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
KLF +M L + P+ V Y LI K G +A S+ +M K + PNV TY L
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 125/267 (46%), Gaps = 40/267 (14%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM---EFCGNVPDVVSYGVIISGYCQIGQLE 302
+ +++ +N ++ LC++G++KEA LL++M E C VP+ V+Y +I GYC+ G+LE
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC--VPNAVTYNCLIDGYCRAGKLE 423
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+++ ++ ++PN N I+ +C++ + A +M K GV + V Y TLI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA------------- 409
C NV A +++M + PD Y +++ GLC++ + +A
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 410 ----------------------HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
+++ ++M G +PD +TY LI K + +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
QM + GL P V TY ++D C G
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVG 630
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 138/284 (48%), Gaps = 42/284 (14%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEA--------------------- 269
+++ I + + GVS N++ + SLC+ + A
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 270 --------------HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
++L+++M+ PDVV+ G++I+ C+ ++++ L++ E+++ K
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 316 ------LRPNEYVYNNIIDLLCKNGEVVEAERVLREMT-KHGVFPDNVVYTTLISGFCKS 368
++ + +N +ID LCK G + EAE +L M + P+ V Y LI G+C++
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G + A ++ MK+ +I P+ V+ +++ G+C+ + A F +M G++ + VTY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
LI+ C + +A + +M++ G +P+ Y L+ GLC+
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
G E K + +E + N ++ N ++ +C+ + A M ME G +
Sbjct: 419 AGKLETAKEVVSRMKEDE---IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
VV+Y +I C + +EK + E++ G P+ +Y +I LC+ +A RV+
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
++ + G D + Y LI FC N +++ +M+++ PD ++Y +++ K
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM-VQKGLTPNVVTY 463
++ +M GL+P TY A+I +C GE+ EA + M + + PN V Y
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 464 TILVDGLCKRG 474
IL++ K G
Sbjct: 656 NILINAFSKLG 666
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 52/273 (19%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV--PDVVSYGVIISGYCQIGQL--EKV 304
N+ N+V+ L + G V +A +L +M +V P+ ++ +++ + L EK+
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKI 243
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH--------------- 349
+ L+ G+ PN I LCKN A +L ++ K+
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 350 --------------------GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK---- 385
+ PD V LI+ CKS V A ++F++M+ K+
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 386 --IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE----PDEVTYTALIYGHCKAG 439
I D + + +++ GLCK+G++ EA +L ++ M LE P+ VTY LI G+C+AG
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEEL---LVRMKLEERCVPNAVTYNCLIDGYCRAG 420
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
++ A + ++M + + PNVVT +V G+C+
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 36/216 (16%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD--------- 284
AIRV + E G S + ++YN+++ C ++ + +L ME G PD
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 285 --------------------------VVSYGVIISGYCQIGQLEKVLKLMEELQ-RKGLR 317
V +YG +I YC +G+L++ LKL +++ +
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
PN +YN +I+ K G +A + EM V P+ Y L + KL
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 378 FDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
DEM ++ P+ ++ ++ L ++V+ K
Sbjct: 710 MDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 129/249 (51%), Gaps = 3/249 (1%)
Query: 222 TRLCGNFEGKKRAIRVFREYPEV---GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
T + GN K+ + + E+ G NT++YN ++HS + +KEA N+ QM+
Sbjct: 363 TTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQE 422
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
G PD V+Y +I + + G L+ + + + +Q GL P+ + Y+ II+ L K G +
Sbjct: 423 AGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPA 482
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A R+ EM G P+ V + +I+ K+ N A KL+ +M+ PD V+Y+ ++
Sbjct: 483 AHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVME 542
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
L G + EA +F+EM PDE Y L+ KAG + +A+ + M+Q GL P
Sbjct: 543 VLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRP 602
Query: 459 NVVTYTILV 467
NV T L+
Sbjct: 603 NVPTCNSLL 611
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 111/199 (55%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +++ E G+S +T +Y+++++ L + G + AH L +M G P++V++ ++I+
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + E LKL ++Q G +P++ Y+ ++++L G + EAE V EM + P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D VY L+ + K+GNV A + + M Q + P+ + S+L ++ +M EA+ L
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 414 SEMLVMGLEPDEVTYTALI 432
ML +GL P TYT L+
Sbjct: 628 QSMLALGLHPSLQTYTLLL 646
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 120/234 (51%), Gaps = 4/234 (1%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
+ G + +Y ++ +L + + E + LL +M G P+ V+Y +I Y + L+
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ + + ++Q G P+ Y +ID+ K G + A + + M + G+ PD Y+ +I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
+ K+G++ AAH+LF EM + P+ V++ M+ K A KL+ +M G +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 423 PDEVTYTAL--IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
PD+VTY+ + + GHC G + EA + +M +K P+ Y +LVD K G
Sbjct: 532 PDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 300 QLEKVLKLMEE----------LQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
Q +VLK M+ L+R+ G + + + Y ++ L + + E ++L EM +
Sbjct: 328 QANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVR 387
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
G P+ V Y LI + ++ + A +F++M++ PD V+Y +++ K G +
Sbjct: 388 DGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDI 447
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
A ++ M GL PD TY+ +I KAG + A + +MV +G TPN+VT+ I++
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
E L G R + Y N ++ + + L+ + G D YTT++ ++
Sbjct: 315 EALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKR--QPGFKHDGHTYTTMVGNLGRA 372
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
+KL DEM + P+ V+Y ++H + + EA +F++M G EPD VTY
Sbjct: 373 KQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTY 432
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
LI H KAG + A ++ +M + GL+P+ TY+++++ L K G
Sbjct: 433 CTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAG 478
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 69/130 (53%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A++++R+ G + ++Y+IV+ L G ++EA + +M+ VPD YG+++
Sbjct: 518 ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + G ++K + + + + GLRPN N+++ + + EA +L+ M G+ P
Sbjct: 578 LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHP 637
Query: 354 DNVVYTTLIS 363
YT L+S
Sbjct: 638 SLQTYTLLLS 647
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 141/274 (51%), Gaps = 13/274 (4%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVF---REYPEVGVSWNTMSYNIVLH 258
FH + + + +D L+ LC +F +YP ++ S+NIVL+
Sbjct: 220 FHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYP-----FDAKSFNIVLN 274
Query: 259 SLCQ-LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLR 317
C +G +EA + M+M G DVVSY +IS Y + G L KVLKL + ++++ +
Sbjct: 275 GWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIE 334
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTKH-GVFPDNVVYTTLISGFCKSGNVSAAHK 376
P+ VYN ++ L K V EA +++ M + G+ P+ V Y +LI CK+ A +
Sbjct: 335 PDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQ 394
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+FDEM +K + P +Y + + L + G+ E +L ++M MG EP TY LI C
Sbjct: 395 VFDEMLEKGLFPTIRTYHAFMRIL-RTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLC 451
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ + + ++M +K + P++ +Y +++ GL
Sbjct: 452 RWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGL 485
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 37/248 (14%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQM-EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
Y+ ++ L ++ K A L+ +M +F ++ + + ++I YC + + K +
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 223
Query: 312 QRKGLRPNEYVYNNIIDLLC--KN---------------------------------GEV 336
+R L + +++ LC KN G
Sbjct: 224 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSP 283
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
EAERV EM GV D V Y+++IS + K G+++ KLFD MK++ I PD Y ++
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 343
Query: 397 LHGLCKIGKMVEAHKLFSEM-LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
+H L K + EA L M G+EP+ VTY +LI CKA + EA + ++M++KG
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKG 403
Query: 456 LTPNVVTY 463
L P + TY
Sbjct: 404 LFPTIRTY 411
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
GI +V + N + LC + A +VF E E G+ +Y+ + L + G+ E
Sbjct: 368 GIEPNVVTYNSLIKPLC-KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE--E 423
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
LL +M G P V +Y ++I C+ + VL L +E++ K + P+ Y +I
Sbjct: 424 VFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIH 483
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
L NG++ EA +EM G+ P+ V + S F SG A ++ D
Sbjct: 484 GLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWF--SGKQYAEQRITD 532
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 255 IVLHSLCQL--GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
I+L C+ + H +L M G PD V+ + + C+ G++++ LM+EL
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH-GVFPDNVVYTTLISGFCKSGNV 371
K P+ Y YN ++ LCK ++ + EM V PD V +T LI C S N+
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A L ++ PD Y +++ G C + K EA ++ +M G+EPD++TY L
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I+G KAG + EA MV G P+ TYT L++G+C++G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 110/196 (56%), Gaps = 1/196 (0%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ + ++ +I + SLC+ G+V EA +L+ ++ + PD +Y ++ C+ L V
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 305 LKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
+ ++E++ ++P+ + +ID +C + + EA ++ ++ G PD +Y T++
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
GFC S A ++ +MK++ + PD ++Y +++ GL K G++ EA M+ G EP
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP 333
Query: 424 DEVTYTALIYGHCKAG 439
D TYT+L+ G C+ G
Sbjct: 334 DTATYTSLMNGMCRKG 349
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 70/127 (55%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
+ V + +S+ I++ ++C ++EA L+ ++ G PD Y I+ G+C + +
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ + + ++++ +G+ P++ YN +I L K G V EA L+ M G PD YT+L+
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 363 SGFCKSG 369
+G C+ G
Sbjct: 343 NGMCRKG 349
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 4/247 (1%)
Query: 227 NFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVV 286
N +G A++VF + + +YN ++ + G EA L M++E G PD V
Sbjct: 312 NLDG---AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV 368
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+Y ++ + + EKV ++ +++Q+ G +E YN II + K G++ A ++ ++M
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Query: 347 TK-HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
G PD + YT LI K+ A L EM I P +Y++++ G K GK
Sbjct: 429 KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGK 488
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
EA FS ML G +PD + Y+ ++ + E R+A+ ++ M+ G TP+ Y +
Sbjct: 489 REEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYEL 548
Query: 466 LVDGLCK 472
++ GL K
Sbjct: 549 MILGLMK 555
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 10/253 (3%)
Query: 226 GNFEGKKRAIRVF-REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
G + + A+ +F R P VG YN ++ + GK +A L+ M G VPD
Sbjct: 202 GRWNQESLAVEIFTRAEPTVGD--RVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPD 259
Query: 285 VVSYGVIISGYCQIGQLEKVL--KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
++S+ +I+ + G L L +L++ ++ GLRP+ YN ++ ++ + A +V
Sbjct: 260 LISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKV 319
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
+M H PD Y +IS + + G + A +LF E++ K PD V+Y S+L+ +
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR 379
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT---PN 459
+ +++ +M MG DE+TY +I+ + K G++ A ++ M KGL+ P+
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM--KGLSGRNPD 437
Query: 460 VVTYTILVDGLCK 472
+TYT+L+D L K
Sbjct: 438 AITYTVLIDSLGK 450
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 129/252 (51%), Gaps = 6/252 (2%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE--AHNLLMQMEFCGNVP 283
G F + + R+ G + +S+N ++++ + G + A LL + G P
Sbjct: 239 GKFSKAQELVDAMRQR---GCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRP 295
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
D ++Y ++S + L+ +K+ E+++ +P+ + YN +I + + G EAER+
Sbjct: 296 DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
E+ G FPD V Y +L+ F + N +++ +M++ D ++Y +++H K
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQ 415
Query: 404 GKMVEAHKLFSEML-VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
G++ A +L+ +M + G PD +TYT LI KA EA ++ ++M+ G+ P + T
Sbjct: 416 GQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Query: 463 YTILVDGLCKRG 474
Y+ L+ G K G
Sbjct: 476 YSALICGYAKAG 487
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE--AERVLRE 345
Y ++ Y + G+ K +L++ ++++G P+ +N +I+ K+G + A +L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
+ G+ PD + Y TL+S + N+ A K+F++M+ + PD +Y +M+ + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
EA +LF E+ + G PD VTY +L+Y + + ++ QM + G + +TY
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 466 LVDGLCKRG 474
++ K+G
Sbjct: 408 IIHMYGKQG 416
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++A V + G + + ++N ++ + Q G + A + M G P V S ++
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ C G+LE++ ++EELQ G + ++ ++D + G + E +++ M G
Sbjct: 829 LHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGY 888
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P +Y +I CK V A + EM++ + + SML I + +
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQ 948
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
++ + GLEPDE TY LI +C+ E + + QM GL P + TY L+
Sbjct: 949 VYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFG 1008
Query: 472 KR 473
K+
Sbjct: 1009 KQ 1010
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 116/232 (50%), Gaps = 3/232 (1%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CG +E RA +F G S S NI+LH+LC G+++E + ++ +++ G
Sbjct: 800 CGCYE---RARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKIS 856
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
S +++ + + G + +V K+ ++ G P +Y +I+LLCK V +AE ++
Sbjct: 857 KSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVS 916
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
EM + + ++ +++ + + +++ +K+ + PD +Y +++ C+
Sbjct: 917 EMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDR 976
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
+ E + L +M +GL+P TY +LI K + +A + +++ KGL
Sbjct: 977 RPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
Y +++ LC+ +V++A ++ +ME ++ + ++ Y I +K +++ + ++
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
GL P+E YN +I + C++ E ++++M G+ P Y +LIS F K +
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A +LF+E+ K + D Y +M+ G +A KL M G+EP T L+
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ +G +EA + + + + + Y+ ++D
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 3/202 (1%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME-FCGNVPDVVSYGVIISGY 295
V+++ ++G + M+YN ++H + G++ A L M+ G PD ++Y V+I
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
+ + + LM E+ G++P Y+ +I K G+ EAE M + G PDN
Sbjct: 449 GKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDN 508
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
+ Y+ ++ + A L+ +M P + Y M+ GL K + + K +
Sbjct: 509 LAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRD 568
Query: 416 MLVM-GLEPDEVTYTALIYGHC 436
M + G+ P E++ + L+ G C
Sbjct: 569 MEELCGMNPLEIS-SVLVKGEC 589
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 3/222 (1%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCG-NVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
Y +LH EA + + G + V +++ YC++G E +++ +
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVV-YCKLGFPETAHQVVNQA 742
Query: 312 QRKGLR-PNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
+ KG +Y +II+ K +AE V+ + + G PD + +L+S + + G
Sbjct: 743 ETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGC 802
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTA 430
A +F+ M + P S +LH LC G++ E + + E+ MG + + +
Sbjct: 803 YERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILL 862
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
++ +AG + E I++ M G P + Y ++++ LCK
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Query: 248 WNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKL 307
WN+M L + K+ + +++ G PD +Y +I YC+ + E+ L
Sbjct: 930 WNSM-----LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLL 984
Query: 308 MEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCK 367
M++++ GL P Y ++I K + +AE++ E+ G+ D Y T++
Sbjct: 985 MQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRD 1044
Query: 368 SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
SG+ S A KL MK I P + ++ G EA K+ S + +E +
Sbjct: 1045 SGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLP 1104
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
Y+++I + ++ + +M ++GL P+ +T V
Sbjct: 1105 YSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 4/203 (1%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G + + ++Y +++ SL + + EA L+ +M G P + +Y +I GY + G+ E+
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+ R G +P+ Y+ ++D+L + E +A + R+M G P +Y +I G
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILG 552
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
K K +M++ + + ++ G C A + + G E +
Sbjct: 553 LMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGEC----FDLAARQLKVAITNGYELE 608
Query: 425 EVTYTALIYGHCKAGEMREAFSI 447
T +++ + +G EAF +
Sbjct: 609 NDTLLSILGSYSSSGRHSEAFEL 631
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 1/192 (0%)
Query: 261 CQLGKVKEAHNLLMQMEFCG-NVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
C+LG + AH ++ Q E G + Y II Y + +K ++ L++ G P+
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPD 786
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
+N+++ + G A + M + G P L+ C G + + + +
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVE 846
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
E++ S ML + G + E K++S M G P Y +I CK
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 440 EMREAFSIHNQM 451
+R+A + ++M
Sbjct: 907 RVRDAEIMVSEM 918
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV-FPDNVVYTTLISG 364
++ +L+ G +E V +++ + CK G A +V+ + G F + +YT +I
Sbjct: 702 QVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEA 761
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+ K A + ++Q PD ++ S++ + G A +F+ M+ G P
Sbjct: 762 YGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPT 821
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ L++ C G + E + + ++ G + + +++D + G
Sbjct: 822 VESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAG 871
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 5/156 (3%)
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+Y ++ N EA +V ++ G V +++ +CK G AH++ ++
Sbjct: 683 MYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQA 742
Query: 382 KQKKIVPDFVS---YTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
+ K F YT ++ K +A + + G PD T+ +L+ + +
Sbjct: 743 ETKGF--HFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC 800
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G A +I N M++ G +P V + IL+ LC G
Sbjct: 801 GCYERARAIFNTMMRDGPSPTVESINILLHALCVDG 836
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 41/270 (15%)
Query: 224 LCGNFEGKKR--AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN 281
+CG + KR A F G + ++Y+++L L + + ++A L M G+
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 282 VPDVVSYGVIISGYCQIGQ---LEKVLKLMEEL-----------------------QRKG 315
P Y ++I G + + ++K ++ MEEL Q K
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKV 599
Query: 316 LRPNEYVYNN-----IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
N Y N I+ +G EA +L + +H ++ LI CK N
Sbjct: 600 AITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNN 659
Query: 371 VSAAHKLFDEMKQKKIVPDF-----VSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
+SAA DE V + Y ++LH EA ++FS++ + G E E
Sbjct: 660 LSAA---LDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASE 716
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
+++ +CK G A + NQ KG
Sbjct: 717 SVCKSMVVVYCKLGFPETAHQVVNQAETKG 746
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 120/245 (48%), Gaps = 2/245 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K+AIRV G+ + +Y +++ LC+ G V A L+ +ME G + V+Y +
Sbjct: 123 KKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNAL 182
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G C +G L + L+ +E L +KGL PN + Y+ +++ K EA ++L E+ G
Sbjct: 183 VRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG 242
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ V Y L++GFCK G A LF E+ K + VSY +L LC G+ EA+
Sbjct: 243 EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANS 302
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG--LTPNVVTYTILVDG 469
L +EM P VTY LI G +A + +M + +Y ++
Sbjct: 303 LLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIAR 362
Query: 470 LCKRG 474
LCK G
Sbjct: 363 LCKEG 367
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 155/347 (44%), Gaps = 43/347 (12%)
Query: 163 QFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLT 222
QF ERL+ K + + + +++ G ++ S N+ LT
Sbjct: 197 QFVERLMQ--KGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLT 254
Query: 223 RLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN 281
C EG+ A+ +FRE P G N +SYNI+L LC G+ +EA++LL +M+
Sbjct: 255 GFCK--EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDR 312
Query: 282 VPDVVSYGVIISGY-------------------------------------CQIGQLEKV 304
P VV+Y ++I+ C+ G+++ V
Sbjct: 313 APSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLV 372
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+K ++E+ + +PNE YN I L N +V EA +++ ++ + Y ++I+
Sbjct: 373 VKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITS 432
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM-LVMGLEP 423
C+ GN AA +L EM + PD +Y++++ GLC G A ++ S M +P
Sbjct: 433 LCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKP 492
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ A+I G CK A + MV+K PN TY ILV+G+
Sbjct: 493 TVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 106/195 (54%)
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G+ P+V ++ C+ +L+K ++++E + G+ P+ Y +++ LCK G V A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
+++ +M HG + V Y L+ G C G+++ + + + + QK + P+ +Y+ +L
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
K EA KL E++V G EP+ V+Y L+ G CK G +A ++ ++ KG N
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 460 VVTYTILVDGLCKRG 474
VV+Y IL+ LC G
Sbjct: 281 VVSYNILLRCLCCDG 295
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 113/219 (51%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
+L+ LC+ ++K+A ++ M G +PD +Y +++ C+ G + ++L+E+++ G
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAH 375
N YN ++ LC G + ++ + + + + G+ P+ Y+ L+ K A
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
KL DE+ K P+ VSY +L G CK G+ +A LF E+ G + + V+Y L+
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
C G EA S+ +M P+VVTY IL++ L G
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHG 330
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 42/283 (14%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
G A+++ E G N +SYN++L C+ G+ +A L ++ G +VVSY
Sbjct: 226 GTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYN 285
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK- 348
+++ C G+ E+ L+ E+ P+ YN +I+ L +G +A +VL+EM+K
Sbjct: 286 ILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKG 345
Query: 349 -HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM-------------------------- 381
H Y +I+ CK G V K DEM
Sbjct: 346 NHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQ 405
Query: 382 -----------KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTA 430
KQK DF Y S++ LC+ G A +L EM G +PD TY+A
Sbjct: 406 EAFYIIQSLSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSA 463
Query: 431 LIYGHCKAGEMREAFSIHNQMVQ-KGLTPNVVTYTILVDGLCK 472
LI G C G A + + M + + P V + ++ GLCK
Sbjct: 464 LIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%)
Query: 308 MEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCK 367
+E L G +PN ++ LCK + +A RV+ M G+ PD YT L++ CK
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 368 SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
GNV A +L ++M+ + V+Y +++ GLC +G + ++ + ++ GL P+ T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
Y+ L+ K EA + ++++ KG PN+V+Y +L+ G CK G
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEG 260
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 141/266 (53%), Gaps = 4/266 (1%)
Query: 211 VVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAH 270
+V++++ + R G E ++ A+ +F E G+ NT S N++L +LC+ +V++A
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEE-AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQAR 210
Query: 271 NLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLL 330
+L+Q++ P+ ++ + I G+C+ ++E+ L ++E++ G RP Y II
Sbjct: 211 VVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCY 269
Query: 331 CKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDF 390
C+ E ++ +L EM +G P+++ YTT++S A ++ MK+ PD
Sbjct: 270 CQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS 329
Query: 391 VSYTSMLHGLCKIGKMVEAHKLFS-EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
+ Y ++H L + G++ EA ++F EM +G+ + TY ++I +C E +A +
Sbjct: 330 LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
Query: 450 QMVQKGL-TPNVVTYTILVDGLCKRG 474
+M L P+V TY L+ KRG
Sbjct: 390 EMESSNLCNPDVHTYQPLLRSCFKRG 415
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 135/274 (49%), Gaps = 5/274 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F +L +G+ + +S NL L LC E + RV + ++ N ++NI +H C
Sbjct: 178 FDRLGEFGLEKNTESMNLLLDTLCK--EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWC 235
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ +V+EA + +M+ G P V+SY II YCQ + KV +++ E++ G PN
Sbjct: 236 KANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSI 295
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD-E 380
Y I+ L E EA RV M + G PD++ Y LI ++G + A ++F E
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVE 355
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL-EPDEVTYTALIYGHCKAG 439
M + + + +Y SM+ C + +A +L EM L PD TY L+ K G
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 440 EMREAFSIHNQMVQK-GLTPNVVTYTILVDGLCK 472
++ E + +MV K L+ + TYT L+ LC+
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 141/266 (53%), Gaps = 4/266 (1%)
Query: 211 VVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAH 270
+V++++ + R G E ++ A+ +F E G+ NT S N++L +LC+ +V++A
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEE-AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQAR 210
Query: 271 NLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLL 330
+L+Q++ P+ ++ + I G+C+ ++E+ L ++E++ G RP Y II
Sbjct: 211 VVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCY 269
Query: 331 CKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDF 390
C+ E ++ +L EM +G P+++ YTT++S A ++ MK+ PD
Sbjct: 270 CQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS 329
Query: 391 VSYTSMLHGLCKIGKMVEAHKLFS-EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
+ Y ++H L + G++ EA ++F EM +G+ + TY ++I +C E +A +
Sbjct: 330 LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
Query: 450 QMVQKGL-TPNVVTYTILVDGLCKRG 474
+M L P+V TY L+ KRG
Sbjct: 390 EMESSNLCNPDVHTYQPLLRSCFKRG 415
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 135/274 (49%), Gaps = 5/274 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F +L +G+ + +S NL L LC E + RV + ++ N ++NI +H C
Sbjct: 178 FDRLGEFGLEKNTESMNLLLDTLCK--EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWC 235
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ +V+EA + +M+ G P V+SY II YCQ + KV +++ E++ G PN
Sbjct: 236 KANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSI 295
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD-E 380
Y I+ L E EA RV M + G PD++ Y LI ++G + A ++F E
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVE 355
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL-EPDEVTYTALIYGHCKAG 439
M + + + +Y SM+ C + +A +L EM L PD TY L+ K G
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 440 EMREAFSIHNQMVQK-GLTPNVVTYTILVDGLCK 472
++ E + +MV K L+ + TYT L+ LC+
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 125/242 (51%), Gaps = 1/242 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ ++++F++ ++GV SYN + + + G+ A +M G P +Y ++
Sbjct: 202 QESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLM 261
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G+ +LE L+ E+++ +G+ P++ +N +I+ C+ ++ EAE++ EM + +
Sbjct: 262 LWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI 321
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P V YTT+I G+ V ++F+EM+ I P+ +Y+++L GLC GKMVEA
Sbjct: 322 GPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKN 381
Query: 412 LFSEMLVMGLEP-DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ M+ + P D + L+ KAG+M A + M + Y +L++
Sbjct: 382 ILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQ 441
Query: 471 CK 472
CK
Sbjct: 442 CK 443
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 126/250 (50%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
G++ ++ + ++ G A + + PE GV W+ + +++ S + G V+E
Sbjct: 144 GLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQE 203
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
+ + +M+ G + SY + + G+ + ++ +G+ P + YN ++
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
+ + A R +M G+ PD+ + T+I+GFC+ + A KLF EMK KI P
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIH 448
VSYT+M+ G + ++ + ++F EM G+EP+ TY+ L+ G C AG+M EA +I
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Query: 449 NQMVQKGLTP 458
M+ K + P
Sbjct: 384 KNMMAKHIAP 393
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%)
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
L ++ K+ A +L+ M G D + V+I Y + G +++ +K+ ++++ G+
Sbjct: 160 LGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERT 219
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
YN++ ++ + G + A+R +M GV P Y ++ GF S + A + F+
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFE 279
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
+MK + I PD ++ +M++G C+ KM EA KLF EM + P V+YT +I G+
Sbjct: 280 DMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + I +M G+ PN TY+ L+ GLC G
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAG 374
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 161/360 (44%), Gaps = 52/360 (14%)
Query: 163 QFTERLIYTYKDWGAHPLV--FDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLF 220
Q + ++ KD G + ++ F+ F+K++S G+ + + NL
Sbjct: 202 QESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLM 261
Query: 221 LTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
L G F + A+R F + G+S + ++N +++ C+ K+ EA L ++M+
Sbjct: 262 L---WGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG 318
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
P VVSY +I GY + +++ L++ EE++ G+ PN Y+ ++ LC G++VE
Sbjct: 319 NKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVE 378
Query: 339 AERVLREM-TKHGVFPDNVVYTTLISGFCKSGNVSAAH---------------------- 375
A+ +L+ M KH DN ++ L+ K+G+++AA
Sbjct: 379 AKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLI 438
Query: 376 -------------KLFDEMKQKKIV--------PDFVSYTSMLHGLCKIGKMVEAHKLFS 414
KL D + +K+I+ + +Y ++ LC G+ +A LF
Sbjct: 439 ENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFR 498
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+++ G++ D+ LI GH K G ++ I M ++G+ Y +L+ +G
Sbjct: 499 QLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKG 557
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Query: 300 QLEKVLKLMEELQRKGL-RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
+LE L+ +R GL R + + +I +L + ++ A +L +M + GV D ++
Sbjct: 129 KLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMF 188
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
LI + K+G V + K+F +MK + SY S+ + + G+ + A + F++M+
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
G+EP TY +++G + + A M +G++P+ T+ +++G C+
Sbjct: 249 EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 113/310 (36%), Gaps = 86/310 (27%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM----------------- 276
+R+F E G+ N +Y+ +L LC GK+ EA N+L M
Sbjct: 344 GLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLL 403
Query: 277 ---EFCG---------------NVP-DVVSYGVIISGYCQIGQLEKVLKLMEELQRK--- 314
G NVP + YGV+I C+ + +KL++ L K
Sbjct: 404 VSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEII 463
Query: 315 -----GLRPNEYVYNNIIDLLCKNGEVVEAERVLRE------------------------ 345
L YN II+ LC NG+ +AE + R+
Sbjct: 464 LRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGN 523
Query: 346 ----------MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
M++ GV ++ Y LI + G A D M + VPD + S
Sbjct: 524 PDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRS 583
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVM-----GLEPDEVTYTALIYGHCKAGEMREAFSIHNQ 450
++ L + G++ A ++ M++M G+E + ++ G + EA +
Sbjct: 584 VIESLFEDGRVQTASRV---MMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDL 640
Query: 451 MVQKGLTPNV 460
+ Q G T ++
Sbjct: 641 LNQNGHTADL 650
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 7/259 (2%)
Query: 218 NLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
N + LC N + K + +FR+ + GV + + N ++ + G ++ +L M
Sbjct: 478 NPIIEYLCNNGQTAKAEV-LFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMS 535
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
G + +Y ++I Y G+ ++ + G P+ ++ ++I+ L ++G V
Sbjct: 536 RRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQ 595
Query: 338 EAERVLREMTKHGV-FPDNV-VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
A RV+ M V DN+ + ++ G+V A D + Q D S
Sbjct: 596 TASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADL---DS 652
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
+L L + GK + A KL L L + +Y ++ AG+ A+S+ ++++KG
Sbjct: 653 LLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKG 712
Query: 456 LTPNVVTYTILVDGLCKRG 474
+ + + L+ L + G
Sbjct: 713 SSTDWKSSDELIKSLNQEG 731
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 1/212 (0%)
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK-GLRPNEYV 322
G + AH L +M V S+ ++S Y +L++ +K +EL K G+ P+
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
YN +I LC+ G + + + E+ K+G PD + + TL+ F + +++D MK
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K + P+ SY S + GL + K +A L M G+ PD TY ALI + +
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
E +N+M +KGLTP+ VTY +L+ LCK+G
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKG 347
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 1/242 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM-EFCGNVPDVVSYGVII 292
A ++F E PE+ S+N +L + K+ EA ++ E G PD+V+Y +I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
C+ G ++ +L + EEL++ G P+ +N +++ + VE +R+ M +
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+ Y + + G ++ + A L D MK + I PD +Y +++ + E K
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
++EM GL PD VTY LI CK G++ A + + ++ L Y +V+ L
Sbjct: 321 YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMG 380
Query: 473 RG 474
G
Sbjct: 381 AG 382
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 117/223 (52%), Gaps = 5/223 (2%)
Query: 234 AIRVFREYPE-VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A++ F+E PE +G++ + ++YN ++ +LC+ G + + ++ ++E G PD++S+ ++
Sbjct: 176 AMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLL 235
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+ + + ++ + ++ K L PN YN+ + L +N + +A ++ M G+
Sbjct: 236 EEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGIS 295
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD Y LI+ + N+ K ++EMK+K + PD V+Y ++ LCK G + A ++
Sbjct: 296 PDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEV 355
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
E + L Y ++ AG++ EA Q+V+ G
Sbjct: 356 SEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA----TQLVKNG 394
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V+ L+ G+ SG AHKLFDEM + S+ ++L K+ EA K F
Sbjct: 123 DFVIRIMLLYGY--SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTF 180
Query: 414 SEM-LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
E+ +G+ PD VTY +I C+ G M + SI ++ + G P+++++ L++ +
Sbjct: 181 KELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYR 240
Query: 473 R 473
R
Sbjct: 241 R 241
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 3/249 (1%)
Query: 222 TRLCGNFEGKKR--AI-RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
T + GN K+ AI ++ E G NT++YN ++HS + + EA N+ QM+
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
G PD V+Y +I + + G L+ + + + +Q GL P+ + Y+ II+ L K G +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A ++ EM G P+ V Y ++ K+ N A KL+ +M+ PD V+Y+ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
L G + EA +F+EM PDE Y L+ KAG + +A+ + M+ GL P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 459 NVVTYTILV 467
NV T L+
Sbjct: 608 NVPTCNSLL 616
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 4/234 (1%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
+ G + +Y ++ +L + + + LL +M G P+ V+Y +I Y + L
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ + + ++Q G +P+ Y +ID+ K G + A + + M G+ PD Y+ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
+ K+G++ AAHKLF EM + P+ V+Y M+ K A KL+ +M G E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 423 PDEVTYTAL--IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
PD+VTY+ + + GHC G + EA ++ +M QK P+ Y +LVD K G
Sbjct: 537 PDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 108/199 (54%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +++ G+S +T +Y+++++ L + G + AH L +M G P++V+Y +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + + LKL ++Q G P++ Y+ ++++L G + EAE V EM + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D VY L+ + K+GNV A + + M + P+ + S+L ++ K+ EA++L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 414 SEMLVMGLEPDEVTYTALI 432
ML +GL P TYT L+
Sbjct: 633 QNMLALGLRPSLQTYTLLL 651
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 268 EAHNLLMQMEFCGNV--------------PDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
+A+ +L QM GN D +Y ++ + Q + KL++E+ R
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
G +PN YN +I + + EA V +M + G PD V Y TLI K+G +
Sbjct: 393 DGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A ++ M+ + PD +Y+ +++ L K G + AHKLF EM+ G P+ VTY ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
H KA + A ++ M G P+ VTY+I+++
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
E LQ GLR + Y N ++ + G + L+ + G D YTT++ ++
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKR--QPGFKHDGHTYTTMVGNLGRA 377
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
A +KL DEM + P+ V+Y ++H + + EA +F++M G +PD VTY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
LI H KAG + A ++ +M GL+P+ TY+++++ L K G
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A++++R+ G + ++Y+IV+ L G ++EA + +M+ +PD YG++
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ + + G +EK + + + GLRPN N+++ + ++ EA +L+ M G+
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 352 FPDNVVYTTLIS-----------GFCKSGNVSAAH 375
P YT L+S GFC S H
Sbjct: 641 RPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGH 675
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 3/249 (1%)
Query: 222 TRLCGNFEGKKR--AI-RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
T + GN K+ AI ++ E G NT++YN ++HS + + EA N+ QM+
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
G PD V+Y +I + + G L+ + + + +Q GL P+ + Y+ II+ L K G +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A ++ EM G P+ V Y ++ K+ N A KL+ +M+ PD V+Y+ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
L G + EA +F+EM PDE Y L+ KAG + +A+ + M+ GL P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 459 NVVTYTILV 467
NV T L+
Sbjct: 608 NVPTCNSLL 616
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 4/234 (1%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
+ G + +Y ++ +L + + + LL +M G P+ V+Y +I Y + L
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ + + ++Q G +P+ Y +ID+ K G + A + + M G+ PD Y+ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
+ K+G++ AAHKLF EM + P+ V+Y M+ K A KL+ +M G E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 423 PDEVTYTAL--IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
PD+VTY+ + + GHC G + EA ++ +M QK P+ Y +LVD K G
Sbjct: 537 PDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 108/199 (54%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +++ G+S +T +Y+++++ L + G + AH L +M G P++V+Y +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + + LKL ++Q G P++ Y+ ++++L G + EAE V EM + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D VY L+ + K+GNV A + + M + P+ + S+L ++ K+ EA++L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 414 SEMLVMGLEPDEVTYTALI 432
ML +GL P TYT L+
Sbjct: 633 QNMLALGLRPSLQTYTLLL 651
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 268 EAHNLLMQMEFCGNV--------------PDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
+A+ +L QM GN D +Y ++ + Q + KL++E+ R
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
G +PN YN +I + + EA V +M + G PD V Y TLI K+G +
Sbjct: 393 DGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A ++ M+ + PD +Y+ +++ L K G + AHKLF EM+ G P+ VTY ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
H KA + A ++ M G P+ VTY+I+++
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
E LQ GLR + Y N ++ + G + L+ + G D YTT++ ++
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKR--QPGFKHDGHTYTTMVGNLGRA 377
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
A +KL DEM + P+ V+Y ++H + + EA +F++M G +PD VTY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
LI H KAG + A ++ +M GL+P+ TY+++++ L K G
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A++++R+ G + ++Y+IV+ L G ++EA + +M+ +PD YG++
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ + + G +EK + + + GLRPN N+++ + ++ EA +L+ M G+
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 352 FPDNVVYTTLIS-----------GFCKSGNVSAAH 375
P YT L+S GFC S H
Sbjct: 641 RPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGH 675
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 121/238 (50%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F E + G+ T +YN +L + G +K+A +++ +ME G PD +Y ++I Y
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 385
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
G+ E +++E++ ++PN +V++ ++ GE + +VL+EM GV PD
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
Y +I F K + A FD M + I PD V++ +++ CK G+ + A ++F M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G P TY +I + + + +M +G+ PNVVT+T LVD K G
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 563
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+++ G+S T + ++ +L G+ EA L ++ G P +Y ++
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
GY + G L+ ++ E++++G+ P+E+ Y+ +ID G A VL+EM V
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P++ V++ L++GF G ++ EMK + PD Y ++ K + A
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
F ML G+EPD VT+ LI HCK G A + M ++G P TY I+++
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 121/243 (49%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A + E + GVS + +Y++++ + G+ + A +L +ME P+ + +
Sbjct: 356 KDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRL 415
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
++G+ G+ +K ++++E++ G++P+ YN +ID K + A M G+
Sbjct: 416 LAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 475
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD V + TLI CK G A ++F+ M+++ +P +Y M++ + + +
Sbjct: 476 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKR 535
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
L +M G+ P+ VT+T L+ + K+G +A +M GL P+ Y L++
Sbjct: 536 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 595
Query: 472 KRG 474
+RG
Sbjct: 596 QRG 598
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 2/226 (0%)
Query: 251 MSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV--LKLM 308
++YN ++ + + +++A NL+ +M G D V+Y ++I + +++ V L+L
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+E++R L + + N+II K+G+ +A ++L G+ ++IS S
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G A LF+E++Q I P +Y ++L G K G + +A + SEM G+ PDE TY
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ LI + AG A + +M + PN ++ L+ G RG
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 114/240 (47%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
+R+++E + + N ++ + G +A LL + G + IIS
Sbjct: 254 LRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
G+ + L EEL++ G++P YN ++ K G + +AE ++ EM K GV PD
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
Y+ LI + +G +A + EM+ + P+ ++ +L G G+ + ++
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
EM +G++PD Y +I K + A + ++M+ +G+ P+ VT+ L+D CK G
Sbjct: 434 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 3/262 (1%)
Query: 214 VDSCNLFLTRLCGNFEGK---KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAH 270
V + +RL F + ++ +V +E +GV + YN+V+ + + + A
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 271 NLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLL 330
+M G PD V++ +I +C+ G+ ++ E ++R+G P YN +I+
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 524
Query: 331 CKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDF 390
+ +R+L +M G+ P+ V +TTL+ + KSG + A + +EMK + P
Sbjct: 525 GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSS 584
Query: 391 VSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQ 450
Y ++++ + G +A F M GL+P + +LI + EAF++
Sbjct: 585 TMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQY 644
Query: 451 MVQKGLTPNVVTYTILVDGLCK 472
M + G+ P+VVTYT L+ L +
Sbjct: 645 MKENGVKPDVVTYTTLMKALIR 666
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 115/242 (47%), Gaps = 1/242 (0%)
Query: 230 GKKRAIRVFREYPEVG-VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
G+ + R+ + E G V N+ ++ +L G+ ++ +L +M+ G PD Y
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
V+I + + L+ + + + +G+ P+ +N +ID CK+G + AE + M +
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
G P Y +I+ + +L +MK + I+P+ V++T+++ K G+ +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
A + EM +GL+P Y ALI + + G +A + M GL P+++ L++
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Query: 469 GL 470
Sbjct: 628 AF 629
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 115/245 (46%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
G F A+ F G+ + +++N ++ C+ G+ A + ME G +P
Sbjct: 455 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
+Y ++I+ Y + + + +L+ +++ +G+ PN + ++D+ K+G +A L E
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M G+ P + +Y LI+ + + G A F M + P ++ S+++ + +
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 634
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
EA + M G++PD VTYT L+ + + ++ ++ +M+ G P+ ++
Sbjct: 635 DAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSM 694
Query: 466 LVDGL 470
L L
Sbjct: 695 LRSAL 699
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 3/249 (1%)
Query: 222 TRLCGNFEGKKR--AI-RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
T + GN K+ AI ++ E G NT++YN ++HS + + EA N+ QM+
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
G PD V+Y +I + + G L+ + + + +Q GL P+ + Y+ II+ L K G +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A ++ EM G P+ V Y ++ K+ N A KL+ +M+ PD V+Y+ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
L G + EA +F+EM PDE Y L+ KAG + +A+ + M+ GL P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 459 NVVTYTILV 467
NV T L+
Sbjct: 608 NVPTCNSLL 616
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 4/234 (1%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
+ G + +Y ++ +L + + + LL +M G P+ V+Y +I Y + L
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ + + ++Q G +P+ Y +ID+ K G + A + + M G+ PD Y+ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
+ K+G++ AAHKLF EM + P+ V+Y M+ K A KL+ +M G E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 423 PDEVTYTAL--IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
PD+VTY+ + + GHC G + EA ++ +M QK P+ Y +LVD K G
Sbjct: 537 PDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 108/199 (54%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +++ G+S +T +Y+++++ L + G + AH L +M G P++V+Y +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + + LKL ++Q G P++ Y+ ++++L G + EAE V EM + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D VY L+ + K+GNV A + + M + P+ + S+L ++ K+ EA++L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 414 SEMLVMGLEPDEVTYTALI 432
ML +GL P TYT L+
Sbjct: 633 QNMLALGLRPSLQTYTLLL 651
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 268 EAHNLLMQMEFCGNV--------------PDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
+A+ +L QM GN D +Y ++ + Q + KL++E+ R
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
G +PN YN +I + + EA V +M + G PD V Y TLI K+G +
Sbjct: 393 DGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A ++ M+ + PD +Y+ +++ L K G + AHKLF EM+ G P+ VTY ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
H KA + A ++ M G P+ VTY+I+++
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
E LQ GLR + Y N ++ + G + L+ + G D YTT++ ++
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKR--QPGFKHDGHTYTTMVGNLGRA 377
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
A +KL DEM + P+ V+Y ++H + + EA +F++M G +PD VTY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
LI H KAG + A ++ +M GL+P+ TY+++++ L K G
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A++++R+ G + ++Y+IV+ L G ++EA + +M+ +PD YG++
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ + + G +EK + + + GLRPN N+++ + ++ EA +L+ M G+
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 352 FPDNVVYTTLIS-----------GFCKSGNVSAAH 375
P YT L+S GFC S H
Sbjct: 641 RPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGH 675
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 122/236 (51%)
Query: 238 FREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQ 297
F++ E G +T +YN ++ G +A + ME ++ D +Y +II +
Sbjct: 266 FKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAK 325
Query: 298 IGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVV 357
G+L+ KL ++++ + LRP+ V+++++D + K G + + +V EM G P +
Sbjct: 326 SGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATM 385
Query: 358 YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML 417
+ +LI + K+G + A +L+DEMK+ P+F YT ++ K GK+ A +F +M
Sbjct: 386 FVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME 445
Query: 418 VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
G P TY+ L+ H +G++ A I+N M GL P + +Y L+ L +
Sbjct: 446 KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANK 501
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%)
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+Y +I + +LE ++ Q G + + YNN++ L G +A + M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
K D Y +I KSG + AA KLF +MK++K+ P F ++S++ + K G++
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
+ K++ EM G P + +LI + KAG++ A + ++M + G PN YT++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 467 VDGLCKRG 474
++ K G
Sbjct: 425 IESHAKSG 432
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A ++F++ E + + ++ ++ S+ + G++ + + M+M+ G+ P + +I
Sbjct: 332 AFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLID 391
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Y + G+L+ L+L +E+++ G RPN +Y II+ K+G++ A V ++M K G P
Sbjct: 392 SYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP 451
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
Y+ L+ SG V +A K+++ M + P SY S+L L + A K+
Sbjct: 452 TPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKIL 511
Query: 414 SEMLVMGLEPD 424
EM MG D
Sbjct: 512 LEMKAMGYSVD 522
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 100/200 (50%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A ++ + + +Y +++ SL + G++ A L QM+ P + ++
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+ G+L+ +K+ E+Q G RP+ ++ ++ID K G++ A R+ EM K G
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFR 415
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P+ +YT +I KSG + A +F +M++ +P +Y+ +L G++ A K+
Sbjct: 416 PNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
Query: 413 FSEMLVMGLEPDEVTYTALI 432
++ M GL P +Y +L+
Sbjct: 476 YNSMTNAGLRPGLSSYISLL 495
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 104/217 (47%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
+YN V+ L + K++ A + + G D +Y ++ + G K ++ E +
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
++ + Y II L K+G + A ++ ++M + + P V+++L+ K+G +
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
+ K++ EM+ P + S++ K GK+ A +L+ EM G P+ YT +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
I H K+G++ A ++ M + G P TY+ L++
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLE 461
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 3/257 (1%)
Query: 220 FLTRLCGNFE--GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
F+ L GN+E G +++ +++ + + ++ S +IV++ L + KV A LL +
Sbjct: 408 FIQNLMGNYESDGVSEIVKLLKDHNK-AILPDSDSLSIVINCLVKANKVDMAVTLLHDIV 466
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
G +P + Y II G C+ G+ E+ LKL+ E++ G+ P+++ N I L + + V
Sbjct: 467 QNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFV 526
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
A +L++M +G P T L+ C++G A K D++ + + V+ T+ +
Sbjct: 527 GALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAI 586
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
GL K + +LF ++ G PD + Y LI CKA EA + N+MV KGL
Sbjct: 587 DGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLK 646
Query: 458 PNVVTYTILVDGLCKRG 474
P V TY ++DG CK G
Sbjct: 647 PTVATYNSMIDGWCKEG 663
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 152/355 (42%), Gaps = 21/355 (5%)
Query: 121 PSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQFTE------------RL 168
P ++L IV++ V +N + MA TL+ + + +++ E +L
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 169 IYTYKDWGAHPLVF--DVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCG 226
+ KD G P F + + K+ YG + + +LC
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 227 NFEGKKRAIRVFREYPEV---GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
N RA+ + +V G + ++ + L + V L + G+ P
Sbjct: 557 N----GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCP 612
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
DV++Y V+I C+ + + L E+ KGL+P YN++ID CK GE+ +
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
M + PD + YT+LI G C SG S A ++EMK K P+ +++ +++ GLCK
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKC 732
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
G EA F EM +EPD Y +L+ + + F I +MV KG P
Sbjct: 733 GWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSL 260
H ++ G++ N + +C EG+ + ++++ E + GV + + N + L
Sbjct: 462 LHDIVQNGLIPGPMMYNNIIEGMCK--EGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCL 519
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+ A +LL +M F G P + ++ C+ G+ K ++++ +G +
Sbjct: 520 AERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHM 579
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
ID L KN V + R++ +G PD + Y LI CK+ A LF+E
Sbjct: 580 VASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNE 639
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M K + P +Y SM+ G CK G++ M PD +TYT+LI+G C +G
Sbjct: 640 MVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGR 699
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
EA N+M K PN +T+ L+ GLCK G
Sbjct: 700 PSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
++ LC+ G+ +A L + G + +V+ I G + +++ L+L ++ G
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAH 375
P+ Y+ +I LCK +EA+ + EM G+ P Y ++I G+CK G +
Sbjct: 610 HCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGL 669
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
M + + PD ++YTS++HGLC G+ EA ++EM P+ +T+ ALI G
Sbjct: 670 SCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGL 729
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTY 463
CK G EA +M +K + P+ Y
Sbjct: 730 CKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 28/263 (10%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A + E + N +Y +++H + ++ +A L +M G D+ Y V+I
Sbjct: 266 KAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLI 325
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER----VLREMTK 348
G C+ LE L L E++R G+ P+ + LLC E E R ++ ++ K
Sbjct: 326 GGLCKHKDLEMALSLYLEIKRSGIPPDRGILGK---LLCSFSEESELSRITEVIIGDIDK 382
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM------------------KQKKIVPDF 390
V ++Y +L GF ++ V A+ + K I+PD
Sbjct: 383 KSVM---LLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDS 439
Query: 391 VSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQ 450
S + +++ L K K+ A L +++ GL P + Y +I G CK G E+ + +
Sbjct: 440 DSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGE 499
Query: 451 MVQKGLTPNVVTYTILVDGLCKR 473
M G+ P+ T + L +R
Sbjct: 500 MKDAGVEPSQFTLNCIYGCLAER 522
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 106/213 (49%), Gaps = 8/213 (3%)
Query: 252 SYNIVLHSLCQLGKVKEAHNL---LMQMEFCGNVPDVVSYGVIISGYCQI--GQLEKVLK 306
++ + L G V EA ++ + +M C VP+ +Y ++ + +E V
Sbjct: 143 AFGFFIRCLGNAGLVDEASSVFDRVREMGLC--VPNAYTYNCLLEAISKSNSSSVELVEA 200
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
++E++ G +++ ++ + C G+ A V E+ G + D + T L+ FC
Sbjct: 201 RLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRG-WLDEHISTILVVSFC 259
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
K G V A +L + ++++ I ++ +Y ++HG K ++ +A +LF +M MG+ D
Sbjct: 260 KWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIA 319
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
Y LI G CK ++ A S++ ++ + G+ P+
Sbjct: 320 LYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPD 352
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGL-RPNEYVYNNIIDLLCKNG----EVVEAER 341
++G I G +++ + + ++ GL PN Y YN +++ + K+ E+VEA
Sbjct: 143 AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEAR- 201
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
L+EM G D T ++ +C +G A +F+E+ + + + +S T ++ C
Sbjct: 202 -LKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFC 259
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
K G++ +A +L + + + TY LI+G K + +AF + +M + G+ ++
Sbjct: 260 KWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIA 319
Query: 462 TYTILVDGLCK 472
Y +L+ GLCK
Sbjct: 320 LYDVLIGGLCK 330
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 4/225 (1%)
Query: 220 FLTRLCGNFEGKKRAIRVFREYPEVGVSW-NTMSYNIVLHSLCQL--GKVKEAHNLLMQM 276
F R GN A VF E+G+ N +YN +L ++ + V+ L +M
Sbjct: 146 FFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEM 205
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
CG D + ++ YC G+ E+ L + E+ +G +E++ ++ CK G+V
Sbjct: 206 RDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWL-DEHISTILVVSFCKWGQV 264
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
+A ++ + + + + Y LI GF K + A +LF++M++ + D Y +
Sbjct: 265 DKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVL 324
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ GLCK + A L+ E+ G+ PD L+ + E+
Sbjct: 325 IGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESEL 369
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F E G+ +YN ++ C+ G++ + +++M PDV++Y +I G C
Sbjct: 636 LFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC 695
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
G+ + + E++ K PN + +I LCK G EA REM + + PD+
Sbjct: 696 ASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSA 755
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
VY +L+S F S N++A +F EM K P V ML
Sbjct: 756 VYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 124/227 (54%), Gaps = 17/227 (7%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F+ E + +T YNI++H LC+ GK EA N+ + G PDV +Y ++I +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+G+ EK L E+ R+GL P+ YN++I LCK ++ +A +V + +
Sbjct: 60 SLGRAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS--------- 107
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
+ TLI+G+CK+ V LF EM ++ IV + ++YT+++HG ++G A +F EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVT 462
+ G+ +T+ ++ C E+R+A ++ ++QK + N VT
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAM---LLQKSSMVSNNVT 211
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 13/152 (8%)
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
YN II LCK G+ EA + + G+ PD Y +I + ++ A KL+ EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
++ +VPD ++Y SM+HGLCK K+ +A K+ T+ LI G+CKA ++
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVK 123
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ ++ +M ++G+ NV+TYT L+ G + G
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVG 155
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F LL G+ V + N+ + F RA +++ E G+ +T++YN ++H LC
Sbjct: 37 FTNLLISGLQPDVQTYNMMI-----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLC 91
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ K+ +A + ++ +I+GYC+ +++ + L E+ R+G+ N
Sbjct: 92 KQNKLAQARKV---------SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVI 142
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
Y +I + G+ A + +EM +GV+ ++ + ++ C
Sbjct: 143 TYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLC 187
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 134/244 (54%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
+K+ + VF+ E G + ++Y +++ ++GK+ +A + M+ G ++ +Y +
Sbjct: 465 EKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM 524
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+I+G+ ++ + E++ ++G++P+ +YNNII C G + A + ++EM K
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
P + +I G+ KSG++ + ++FD M++ VP ++ +++GL + +M +A
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
++ EM + G+ +E TYT ++ G+ G+ +AF ++ +GL ++ TY L+
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC 704
Query: 471 CKRG 474
CK G
Sbjct: 705 CKSG 708
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 121/243 (49%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+R++ VF G ++N +++ L + ++++A +L +M G + +Y I
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ GY +G K + LQ +GL + + Y ++ CK+G + A V +EM+ +
Sbjct: 666 MQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
++ VY LI G+ + G+V A L +MK++ + PD +YTS + K G M A +
Sbjct: 726 PRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ 785
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
EM +G++P+ TYT LI G +A +A S + +M G+ P+ Y L+ L
Sbjct: 786 TIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLL 845
Query: 472 KRG 474
R
Sbjct: 846 SRA 848
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 122/242 (50%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A+ V R E GV N +Y+++++ +L A + M G PDV+ Y II
Sbjct: 502 KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
S +C +G +++ ++ ++E+Q+ RP + II K+G++ + V M + G
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P + LI+G + + A ++ DEM + + +YT ++ G +G +A +
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
F+ + GL+ D TY AL+ CK+G M+ A ++ +M + + N Y IL+DG +
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 473 RG 474
RG
Sbjct: 742 RG 743
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 1/271 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ G+ V N ++ CG RAI+ +E ++ T ++ ++H
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCG-MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ G ++ + + M CG VP V ++ +I+G + Q+EK +++++E+ G+ NE+
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y I+ G+ +A + G+ D Y L+ CKSG + +A + EM
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ I + Y ++ G + G + EA L +M G++PD TYT+ I KAG+M
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
A +M G+ PN+ TYT L+ G +
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWAR 811
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 137/277 (49%), Gaps = 7/277 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F + G V +V + N + L + +K A+ + E GVS N +Y ++
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEK-AVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+G +A +++ G D+ +Y ++ C+ G+++ L + +E+ + + N +
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
VYN +ID + G+V EA ++++M K GV PD YT+ IS K+G+++ A + +EM
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ + P+ +YT+++ G + +A + EM MG++PD+ Y L+ +
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Query: 442 REAF------SIHNQMVQKGLTPNVVTYTILVDGLCK 472
EA+ +I +MV+ GL ++ T LCK
Sbjct: 851 AEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCK 887
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 122/241 (50%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A VF + + G+ + + YN ++ + C +G + A + +M+ + P ++ II
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
GY + G + + L++ + ++R G P + +N +I+ L + ++ +A +L EMT GV
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ YT ++ G+ G+ A + F ++ + + D +Y ++L CK G+M A +
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM + + Y LI G + G++ EA + QM ++G+ P++ TYT + K
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 474 G 474
G
Sbjct: 778 G 778
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 121/236 (51%)
Query: 238 FREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQ 297
F E + + N Y ++++ CQ ++ A L+ +ME G + Y ++ GY
Sbjct: 402 FDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTM 461
Query: 298 IGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVV 357
+ +K L + + L+ G P Y +I+L K G++ +A V R M + GV +
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 358 YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML 417
Y+ +I+GF K + + A +F++M ++ + PD + Y +++ C +G M A + EM
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 418 VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ P T+ +I+G+ K+G+MR + + + M + G P V T+ L++GL ++
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK 637
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 116/242 (47%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
RA F G++ + Y ++H+ + EA + + +M+ G +V+Y VI+
Sbjct: 327 RARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIV 386
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
G+ + G E +E +R N +Y II C+ + AE ++REM + G+
Sbjct: 387 GGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGID 446
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
+Y T++ G+ + +F +K+ P V+Y +++ K+GK+ +A ++
Sbjct: 447 APIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
M G++ + TY+ +I G K + AF++ MV++G+ P+V+ Y ++ C
Sbjct: 507 SRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCG 566
Query: 473 RG 474
G
Sbjct: 567 MG 568
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P +G+++ Y + G + + + E ++ +G+ P +Y ++I ++ EA
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
+R+M + G+ V Y+ ++ GF K+G+ AA FDE K+ + Y +++ C+
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
M A L EM G++ Y ++ G+ + ++ + ++ + G TP VVT
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 463 YTILVDGLCKRG 474
Y L++ K G
Sbjct: 487 YGCLINLYTKVG 498
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 69/153 (45%)
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
+P+ + ++ + G++ A M G+ P + +YT+LI + ++ A
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+MK++ I V+Y+ ++ G K G A F E + + Y +IY HC
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ M A ++ +M ++G+ + Y ++DG
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDG 458
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 178/409 (43%), Gaps = 54/409 (13%)
Query: 108 LDFFNWARSRRD-KPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQFTE 166
L FF+W+ R+ + +++ + +HI V + L A+ L+ D +
Sbjct: 97 LSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPD-----SDLVD 151
Query: 167 RLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCG 226
L+ TY+ + PLVFD+ Q F +L G +SV + N +
Sbjct: 152 SLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLI----- 206
Query: 227 NFEGKKR----AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN- 281
++ K + R++ + + N ++ I++ LC+ G++KE +LL ++ CG
Sbjct: 207 HYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRI--CGKR 264
Query: 282 ------------------------------------VPDVVSYGVIISGYCQIGQLEKVL 305
V D + Y +++ + G L
Sbjct: 265 CLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSAR 324
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
K+ +E+ ++G N +VY + + C+ G+V EAER+L EM + GV P + + LI GF
Sbjct: 325 KVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGF 384
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
+ G + + M + ++P ++ M+ + KI + A+++ ++ + G PDE
Sbjct: 385 ARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDE 444
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY+ LI G + ++ +A + +M + ++P + L+ GLC G
Sbjct: 445 HTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCG 493
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +VF E + G S N+ Y + + C+ G VKEA LL +ME G P ++ +I
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+ + G EK L+ E + +GL P+ +N ++ + K V A +L + G P
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVP 442
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y+ LI GF + ++ A KLF EM+ +K+ P F + S++ GLC GK+ K
Sbjct: 443 DEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYL 502
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMV 452
M +EP+ Y ALI K G+ A ++N+M+
Sbjct: 503 KIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 141/271 (52%), Gaps = 11/271 (4%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIR-VFREYPEVGVSWNTMSYNIVLHSLCQL 263
+L G+ +V CN + N GK R VF + +S S+N +L S +L
Sbjct: 115 VLRLGLESNVSMCNSLIVMYSRN--GKLELSRKVFNSMKDRNLS----SWNSILSSYTKL 168
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
G V +A LL +ME CG PD+V++ ++SGY G + + +++ +Q GL+P+
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
++++ + + G + + + + ++ ++ D V TTLI + K+G + A +FD M
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
K I V++ S++ GL + +A L M G++PD +T+ +L G+ G+ +
Sbjct: 289 KNI----VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + +M +KG+ PNVV++T + G K G
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 40/262 (15%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N +++N ++ L +K+A L+++ME G PD +++ + SGY +G+ EK L ++
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS----- 363
+++ KG+ PN + I KNG A +V +M + GV P+ +TL+
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Query: 364 ----------GFC--------------------KSGNVSAAHKLFDEMKQKKIVPDFVSY 393
GFC KSG++ +A ++F +K K + S+
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL----ASW 465
Query: 394 TSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
ML G G+ E FS ML G+EPD +T+T+++ +G ++E + + M
Sbjct: 466 NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Query: 454 K-GLTPNVVTYTILVDGLCKRG 474
+ G+ P + + +VD L + G
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSG 547
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 180/430 (41%), Gaps = 31/430 (7%)
Query: 51 PRKPSIADADLVRHVSTTIKRRRS-EPLRRVLKPFESKLNPHHLIWVLINIKNDYVLVLD 109
P S D V+ + + R E + L+ + P ++ VL + K VL
Sbjct: 604 PPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLR 663
Query: 110 FFNWARSRRD-KPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQFTERL 168
FF+W R K + EA + + +A D K ++L +E +
Sbjct: 664 FFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMR--------------RQGC 709
Query: 169 IYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNF 228
+ T W + F ++ G++ S + +T LC
Sbjct: 710 LITQDTWA-------IMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC--- 759
Query: 229 EGKKR----AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
E K R A R FRE G + L LC++G K+A + L + G P
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPV 818
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
V+Y + I C+IG+LE+ L + + + ++Y Y +I+ L + G++ +A +
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
M + G P VYT+LI F K + + +M+ + P V+YT+M+ G +G
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLG 938
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
K+ EA F M G PD TY+ I C+A + +A + ++M+ KG+ P+ + +
Sbjct: 939 KVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFR 998
Query: 465 ILVDGLCKRG 474
+ GL + G
Sbjct: 999 TVFYGLNREG 1008
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 142/271 (52%), Gaps = 2/271 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F K+ G + + N+ + LC G A+ ++E E G+++ +Y ++L +
Sbjct: 247 FEKMRKSGFELDATAYNIMIRSLCIAGRGD-LALEFYKEMMEKGITFGLRTYKMLLDCIA 305
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ KV ++ M + + ++G ++ +C G++++ L+L+ EL+ K + +
Sbjct: 306 KSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAK 365
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+ ++ LC+ +V+A ++ ++ K D+ VY +ISG+ + +VS A + F+ +
Sbjct: 366 YFEILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVI 424
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K+ P +YT ++ L K+ + + LF+EM+ G+EPD V TA++ GH +
Sbjct: 425 KKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRV 484
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
EA+ + + M +KG+ P +Y+I V LC+
Sbjct: 485 AEAWKVFSSMEEKGIKPTWKSYSIFVKELCR 515
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A+ + RE + + + I++ LC+ ++ +A ++ M+ + D YG+I
Sbjct: 346 KEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKR-RKLDDSNVYGII 404
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
ISGY + + K L+ E +++ G P Y I+ L K + + + EM ++G+
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD+V T +++G V+ A K+F M++K I P + SY+ + LC+ + E K
Sbjct: 465 EPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIK 524
Query: 412 LFSEM 416
+F++M
Sbjct: 525 IFNQM 529
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 109/233 (46%), Gaps = 1/233 (0%)
Query: 240 EYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIG 299
E + G + ++ I++ + K+ + + +M G D +Y ++I C G
Sbjct: 214 EMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAG 273
Query: 300 QLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYT 359
+ + L+ +E+ KG+ Y ++D + K+ +V + + +M + ++ +
Sbjct: 274 RGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFG 333
Query: 360 TLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVM 419
L+ FC SG + A +L E+K K++ D + ++ GLC+ +MV+A ++ M
Sbjct: 334 YLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRR 393
Query: 420 GLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
L+ D Y +I G+ + ++ +A + + G P V TYT ++ L K
Sbjct: 394 KLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 1/225 (0%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G S YN +L + + L+ +ME G D+ ++ ++IS Y + ++ K
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
L + E++++ G + YN +I LC G A +EM + G+ Y L+
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
KS V + D+M + + + ++ +L C GK+ EA +L E+ + D
Sbjct: 304 IAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD 363
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ L+ G C+A M +A I + M ++ L + V Y I++ G
Sbjct: 364 AKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISG 407
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 35/196 (17%)
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
Q+ G +YN ++ + + + + ++ EM K+G D +T LIS + K+ +
Sbjct: 181 QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
+F++M++ D +Y M+ LC G+ A + + EM+ G+ TY L
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
Query: 432 I------------------------------YGH-----CKAGEMREAFSIHNQMVQKGL 456
+ +G+ C +G+++EA + ++ K +
Sbjct: 301 LDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEM 360
Query: 457 TPNVVTYTILVDGLCK 472
+ + ILV GLC+
Sbjct: 361 CLDAKYFEILVKGLCR 376
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ ++Y ++ LGKV+EA N ME G PD +Y I+ CQ + E LKL+
Sbjct: 923 SVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLL 982
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGE 335
E+ KG+ P+ + + L + G+
Sbjct: 983 SEMLDKGIAPSTINFRTVFYGLNREGK 1009
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 130/246 (52%)
Query: 227 NFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVV 286
++ ++AIR +++ + G ++Y +++ +C+ A +L M G PD+V
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+Y +++ C+ G LE+V +++ + GL N YN ++ LC + E E +L M
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
+ P + Y LI+G CK+ +S A F +M ++K +PD V+Y ++L + K G +
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
+A +L + P +TY ++I G K G M++A +++QM+ G+ P+ +T L
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSL 460
Query: 467 VDGLCK 472
+ G C+
Sbjct: 461 IYGFCR 466
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%)
Query: 221 LTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCG 280
L R + +A+ + R G +T++YN+++ +LC+ G ++ A LL M G
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 281 NVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAE 340
+ PDV++Y +I G E+ ++ ++ + G P Y +++L+C+ A
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGL 400
VL +M G +PD V Y +L++ C+ GN+ + + + + V+Y ++LH L
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
Query: 401 CKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
C E ++ + M P +TY LI G CKA + A QM+++ P++
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 461 VTYTILVDGLCKRG 474
VTY ++ + K G
Sbjct: 385 VTYNTVLGAMSKEG 398
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 109/218 (50%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N +LH+LC GK+ +A L+ M VP S ++ G +I QL+K + ++ +
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
G P+ YN II LCK G + A +L +M+ G PD + Y T+I GN
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A + + + Q P ++YT ++ +C+ A ++ +M V G PD VTY +L+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+C+ G + E S+ ++ GL N VTY L+ LC
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 6/233 (2%)
Query: 245 GVSWNTMSYNIVLHSLCQ---LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQL 301
G+ NT++YN +LHSLC +V+E N++ Q +C P V++Y ++I+G C+ L
Sbjct: 309 GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC---PTVITYNILINGLCKARLL 365
Query: 302 EKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTL 361
+ + ++ + P+ YN ++ + K G V +A +L + P + Y ++
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSV 425
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
I G K G + A +L+ +M I PD ++ S+++G C+ + EA ++ E G
Sbjct: 426 IDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGN 485
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY +I G CK E+ A + M+ G P+ YT +V G+ + G
Sbjct: 486 GIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 1/243 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
+LS+G+ ++ + N L LC + E + + ++YNI+++ LC
Sbjct: 302 IQHILSHGLELNTVTYNTLLHSLCSH-EYWDEVEEILNIMYQTSYCPTVITYNILINGLC 360
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ + A + QM +PD+V+Y ++ + G ++ ++L+ L+ P
Sbjct: 361 KARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLI 420
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN++ID L K G + +A + +M G+FPD++ +LI GFC++ V A ++ E
Sbjct: 421 TYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKET 480
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ +Y ++ GLCK ++ A ++ ML G +PDE YTA++ G + G
Sbjct: 481 SNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMG 540
Query: 442 REA 444
EA
Sbjct: 541 SEA 543
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%)
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
I+ C G+L KL+E + R P+ +N++ L + ++ +A +LR M G
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
PD + Y +I CK G++ A L ++M PD ++Y +++ + G +A
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ + + L G P +TYT L+ C+ A + M +G P++VTY LV+
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 471 CKRG 474
C+RG
Sbjct: 290 CRRG 293
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
+E N I+ LC NG++ +A +++ M +H P + L+ G + + A +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
M VPD ++Y ++ LCK G + A L +M + G PD +TY +I
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
G +A +Q G P ++TYT+LV+ +C+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCR 256
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 113/215 (52%), Gaps = 1/215 (0%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
++ I++ + G EA + +ME G VPD +++ ++IS + + + + L
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
+ + P+ VY N++ C+ GE+ EAE+V +EM G+ P+ Y+ +I C+ G +
Sbjct: 248 KDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
S AH +F +M P+ +++ +++ K G+ + +++++M +G EPD +TY L
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
I HC+ + A + N M++K N T+ +
Sbjct: 367 IEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTI 401
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 167/391 (42%), Gaps = 26/391 (6%)
Query: 104 YVLVLDFFNWARSRRDKPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQ 163
+ L LDF S+ PS+ C++ + + + Q+L F WAT R D H
Sbjct: 95 HALSLDFSQIETSQVS-PSV-VRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPH 152
Query: 164 -FTERLIYTYK----DWGAHPL-------------VFDVFFQXXXXXXXXXXXXXXFHKL 205
+ E + + K D H + F + + F+++
Sbjct: 153 PYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 206 LSYGIVVSVDSCNLFLTRLCGNFEGKKRA--IRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
YG V + + + N K+RA + F + + + + Y ++ C+
Sbjct: 213 EDYGCVPD----KIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRA 268
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
G++ EA + +M+ G P+V +Y ++I C+ GQ+ + + ++ G PN +
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
NN++ + K G + +V +M K G PD + Y LI C+ N+ A K+ + M +
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
KK + ++ ++ + K + AH+++S+M+ EP+ VTY L+ +
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +M K + PNV TY +LV C G
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMG 479
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 36/259 (13%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLM------------------- 274
A +VF+E G+ N +Y+IV+ +LC+ G++ AH++
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333
Query: 275 ----------------QMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
QM+ G PD ++Y +I +C+ LE +K++ + +K
Sbjct: 334 VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEV 393
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
N +N I + K +V A R+ +M + P+ V Y L+ F S + K+
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMG-LEPDEVTYTALIYGHCK 437
EM K++ P+ +Y ++ C +G A+KLF EM+ L P Y ++ +
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513
Query: 438 AGEMREAFSIHNQMVQKGL 456
AG++++ + +M+QKGL
Sbjct: 514 AGQLKKHEELVEKMIQKGL 532
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 134/254 (52%), Gaps = 2/254 (0%)
Query: 221 LTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCG 280
L + G + +A+ VF + + +YN V+ L Q G+ ++ H + +M G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 281 NV-PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
+ PD ++Y +IS Y ++G+ + ++L +E++ ++P E +Y ++ + K G+V +A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
+ EM + G P YT LI G K+G V A+ + +M + + PD V ++++
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA-GEMREAFSIHNQMVQKGLTP 458
L K+G++ E +FSEM + P V+Y +I ++ + E S ++M ++P
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 459 NVVTYTILVDGLCK 472
+ TY+IL+DG CK
Sbjct: 408 SEFTYSILIDGYCK 421
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 1/231 (0%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG-YCQIGQLEK 303
G++ + + N +++ L ++G+V+E N+ +M P VVSY +I + + +
Sbjct: 333 GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSE 392
Query: 304 VLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
V ++++ + P+E+ Y+ +ID CK V +A +L EM + G P Y +LI+
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
K+ AA++LF E+K+ Y M+ K GK+ EA LF+EM G P
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP 512
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
D Y AL+ G KAG + EA S+ +M + G ++ ++ I+++G + G
Sbjct: 513 DVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTG 563
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Query: 251 MSYNIVLHSLCQL-GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLME 309
+SYN V+ +L + V E + +M+ P +Y ++I GYC+ ++EK L L+E
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 310 ELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSG 369
E+ KG P Y ++I+ L K A + +E+ ++ + VY +I F K G
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Query: 370 NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYT 429
+S A LF+EMK + PD +Y +++ G+ K G + EA+ L +M G D ++
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHN 553
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
++ G + G R A + + G+ P+ VTY L+
Sbjct: 554 IILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL 591
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 3/193 (1%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P V+S V G ++ + K L + + + + +P YN++I +L + G+ + V
Sbjct: 162 PAVLSELVKALGRAKM--VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEV 219
Query: 343 LREMTKHG-VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
EM G FPD + Y+ LIS + K G +A +LFDEMK + P YT++L
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
K+GK+ +A LF EM G P TYT LI G KAG + EA+ + M++ GLTP+VV
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 462 TYTILVDGLCKRG 474
L++ L K G
Sbjct: 340 FLNNLMNILGKVG 352
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +F+E E + ++ Y +++ + GK+ EA +L +M+ G+ PDV +Y ++S
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G + G + + L+ +++ G R + +N I++ + G A + + G+ P
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
D V Y TL+ F +G A ++ EMK K D ++Y+S+L + +
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 37/174 (21%)
Query: 338 EAERVLREMTKHG-VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
E R ++E+ ++ V V + L+ ++ VS A +F + K +K P +Y S+
Sbjct: 144 EMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSV 203
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMG-LEPDEVTYTALIYGH-------------------C 436
+ L + G+ + H++++EM G PD +TY+ALI + C
Sbjct: 204 ILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNC 263
Query: 437 ----------------KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
K G++ +A + +M + G +P V TYT L+ GL K G
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 126/243 (51%), Gaps = 2/243 (0%)
Query: 233 RAIRVFREYPE-VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+A+ +F P+ +G YN +LH+LC + A+ L+ +M G PD +Y ++
Sbjct: 164 QAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAIL 223
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
++G+C G++++ + ++E+ R+G P + +I+ L G + A+ ++ +MTK G
Sbjct: 224 VNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGF 283
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD + LI KSG V +++ + + D +Y +++ + KIGK+ EA +
Sbjct: 284 VPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFR 343
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
L + + G +P Y +I G C+ G +AFS + M K PN YT+L+ +C
Sbjct: 344 LLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLIT-MC 402
Query: 472 KRG 474
RG
Sbjct: 403 GRG 405
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 5/270 (1%)
Query: 207 SYGIVVSVDSCNLFLTRLCG--NFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
+ G +VD N L LC F G A + R G+ + +Y I+++ C G
Sbjct: 175 TLGCQQTVDVYNSLLHALCDVKMFHG---AYALIRRMIRKGLKPDKRTYAILVNGWCSAG 231
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K+KEA L +M G P ++I G G LE +++ ++ + G P+ +N
Sbjct: 232 KMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFN 291
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I+ + K+GEV + K G+ D Y TLI K G + A +L + +
Sbjct: 292 ILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVED 351
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
P Y ++ G+C+ G +A FS+M V P+ YT LI + G+ +A
Sbjct: 352 GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDA 411
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +M + GL P + ++ DGL G
Sbjct: 412 ANYLVEMTEMGLVPISRCFDMVTDGLKNGG 441
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A E G + ++++ L G ++ A ++ +M G VPD+ ++ ++
Sbjct: 234 KEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNIL 293
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I + G++E +++ + GL + Y +I + K G++ EA R+L + G
Sbjct: 294 IEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGH 353
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P +Y +I G C++G A F +MK K P+ YT ++ + GK V+A
Sbjct: 354 KPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAAN 413
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
EM MGL P + + G G+ A I VQ
Sbjct: 414 YLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQ 455
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
K+ G V + + N+ + + + E + I ++ ++G+ + +Y ++ ++ ++
Sbjct: 277 KMTKGGFVPDIQTFNILIEAISKSGE-VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKI 335
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
GK+ EA LL G+ P Y II G C+ G + +++ K PN VY
Sbjct: 336 GKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVY 395
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
+I + + G+ V+A L EMT+ G+ P + + + G G A ++
Sbjct: 396 TMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 129/260 (49%), Gaps = 1/260 (0%)
Query: 216 SCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQ 275
+C + +T L K +F + E GV W+ + ++ S C G +EA + +
Sbjct: 310 TCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTE 369
Query: 276 MEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGE 335
ME G + + Y ++ Y + +E+V L E++ KGL+P+ YN ++D + +
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 336 VVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS-AAHKLFDEMKQKKIVPDFVSYT 394
E +LREM G+ P+ YT LIS + ++ +S A F MK+ + P SYT
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK 454
+++H G +A+ F EM G++P TYT+++ ++G+ + I M+++
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE 549
Query: 455 GLTPNVVTYTILVDGLCKRG 474
+ +TY L+DG K+G
Sbjct: 550 KIKGTRITYNTLLDGFAKQG 569
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE-AHNLLMQMEFCGNVPDVVSYGVIISGY 295
+ RE ++G+ N SY ++ + + K+ + A + ++M+ G P SY +I Y
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAY 495
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
G EK EE+ ++G++P+ Y +++D ++G+ + + + M + +
Sbjct: 496 SVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTR 555
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
+ Y TL+ GF K G A + E + + P ++Y +++ + G+ + +L E
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
M + L+PD +TY+ +IY + + + AF H MV+ G P+ +Y L
Sbjct: 616 MAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 120/235 (51%), Gaps = 7/235 (2%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F E + G+ + +YNI++ + + + LL +ME G P+V SY +IS Y
Sbjct: 401 LFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAY- 459
Query: 297 QIGQLEKVLKLMEE----LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
G+ +K+ + + +++ GL+P+ + Y +I +G +A EM K G+
Sbjct: 460 --GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIK 517
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P YT+++ F +SG+ +++ M ++KI ++Y ++L G K G +EA +
Sbjct: 518 PSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDV 577
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
SE MGL+P +TY L+ + + G+ + + +M L P+ +TY+ ++
Sbjct: 578 VSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEK-VLKLMEEL 311
YN + L + +A + M+ PD V+ ++I+ + G+ K V ++ E++
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
KG++ ++ V+ ++ C G EA + EM K G+ + +VY TL+ + KS ++
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
LF EM+ K + P +Y ++ + + L EM +GLEP+ +YT L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 432 IYGHCKAGEMRE-AFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I + + +M + A +M + GL P+ +YT L+ G
Sbjct: 456 ISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 95/198 (47%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A F +VG+ ++ SY ++H+ G ++A+ +M G P V +Y ++
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 528
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ + G K++++ + + R+ ++ YN ++D K G +EA V+ E +K G+ P
Sbjct: 529 AFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ Y L++ + + G + +L EM + PD ++Y++M++ ++ A
Sbjct: 589 SVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYH 648
Query: 414 SEMLVMGLEPDEVTYTAL 431
M+ G PD +Y L
Sbjct: 649 KMMVKSGQVPDPRSYEKL 666
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSG-NVSAAHKLFDE 380
+YN I L + +A V M K V+PDNV LI+ K+G + ++F++
Sbjct: 275 LYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEK 334
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M +K + + ++ C G EA + +EM G+ + + Y L+ + K+
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ E + +M KGL P+ TY IL+D +R
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARR 427
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 121/219 (55%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
SYN V+ L Q +++ +L+ ++ VPDV +Y ++++ C+ + +++ +
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
+ GLRP +Y++II L K G VVEAE +M + G+ PD + Y +I+ + ++G +
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A++L +E+ + + P +YT ++ G K+G M + + +ML GL P+ V YTAL
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTAL 693
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
I K G+ + +F++ M + + + + Y L+ GL
Sbjct: 694 IGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 142/294 (48%), Gaps = 38/294 (12%)
Query: 211 VVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAH 270
V VD+ + + LC + + A + E+G+ Y+ ++ SL + G+V EA
Sbjct: 544 VPDVDTYLIVVNELCKKND-RDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 271 NLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLL 330
+M G PD ++Y ++I+ Y + G++++ +L+EE+ + LRP+ + Y +I
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 331 CKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDF 390
K G + + + L +M + G+ P+ V+YT LI F K G+ + LF M + I D
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH 722
Query: 391 VSYTSMLHGLCK-------------------IGKMVEAHKLFS-------------EMLV 418
++Y ++L GL + + +++ L S M V
Sbjct: 723 IAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEV 782
Query: 419 MG-----LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+G + P+ + +I G+C AG + EA++ M ++G+ PN+VTYTIL+
Sbjct: 783 IGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILM 836
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 2/249 (0%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
GN E K ++ E + + +V +LC A + + +M G P
Sbjct: 455 GNIEVKVESL--LGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLP 512
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
SY +I Q +E + L+ +Q P+ Y +++ LCK + A ++
Sbjct: 513 FSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDA 572
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M + G+ P +Y+++I K G V A + F +M + I PD ++Y M++ + G+
Sbjct: 573 MEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGR 632
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ EA++L E++ L P TYT LI G K G M + ++M++ GL+PNVV YT
Sbjct: 633 IDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTA 692
Query: 466 LVDGLCKRG 474
L+ K+G
Sbjct: 693 LIGHFLKKG 701
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 15/227 (6%)
Query: 230 GKKRAI-RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
GK++ + R+ R P V + + +Y ++ +GKVK++ +P++ +
Sbjct: 749 GKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSI-----------IPNLYLH 797
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
II+GYC G+L++ +E +Q++G+ PN Y ++ + G++ E +
Sbjct: 798 NTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDI---ESAIDLFEG 854
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
PD V+Y+TL+ G C A L EM++ I P+ SY +L LC +E
Sbjct: 855 TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTME 914
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
A K+ +M + + P + +T LIY C+ ++REA ++ MVQ G
Sbjct: 915 AVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 115/234 (49%), Gaps = 6/234 (2%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G + + S ++V+ LC + EA + Q++ G+ + + G C G L +
Sbjct: 161 GYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEA 220
Query: 305 LKLMEEL---QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTL 361
+ +++ L R L N +Y ++ CK G EAE + M G + D V+YT L
Sbjct: 221 IGMLDTLCGMTRMPLPVN--LYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCL 278
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
+ +CK N++ A +L+ M ++ D + +++HG K+G + + +FS+M+ G+
Sbjct: 279 MKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGV 338
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIH-NQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + TY +I +CK G + A + N + ++ NV YT L+ G K+G
Sbjct: 339 QSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+K + PN Y++N II C G + EA L M K G+ P+ V YT L+ ++G++
Sbjct: 787 KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIE 846
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
+A LF+ + PD V Y+++L GLC + ++A L EM G+ P++ +Y L+
Sbjct: 847 SAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
C + EA + M + P + +T L+ LC+
Sbjct: 904 QCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCE 943
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 39/268 (14%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN--VPDVVSYGVIISGYCQIGQLE 302
G+ ++ Y ++ L ++G+ A Q GN VPD ++ ++ + +
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQ-RVIGNGIVPDSSVLDSMVFCLVKLRRFD 148
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA-------------------ERVL 343
+ ++ + G P+ + ++D LC +EA +R+
Sbjct: 149 EARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLF 208
Query: 344 REMTKHGVFPDNV-----------------VYTTLISGFCKSGNVSAAHKLFDEMKQKKI 386
+ + HG + + +Y +L FCK G + A LFD M+
Sbjct: 209 KGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGY 268
Query: 387 VPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFS 446
D V YT ++ CK M A +L+ M+ E D + LI+G K G + +
Sbjct: 269 YVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRV 328
Query: 447 IHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +QM++KG+ NV TY I++ CK G
Sbjct: 329 MFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 129/299 (43%), Gaps = 12/299 (4%)
Query: 179 PLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIR 236
P +F+ F +++ G+ +V + ++ + C GN + A+R
Sbjct: 307 PCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD---YALR 363
Query: 237 VF-REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
+F +S N Y ++ + G + +A +LLM+M G VPD ++Y V++
Sbjct: 364 LFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKML 423
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
+ +L+ + +++ + G N V +++ ++ V+ E +L E+ +
Sbjct: 424 PKCHELKYAMVILQSILDNGCGINPPVIDDLGNI------EVKVESLLGEIARKDANLAA 477
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
V + + C N AA ++M P SY S++ L + + + L +
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + PD TY ++ CK + AF+I + M + GL P V Y+ ++ L K+G
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQG 596
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 30/270 (11%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+R++ E + +N ++H +LG + + + QM G +V +Y ++I
Sbjct: 291 AMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIG 350
Query: 294 GYCQIGQLEKVLKL-MEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
YC+ G ++ L+L + + + N + Y N+I K G + +A +L M +G+
Sbjct: 351 SYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV 410
Query: 353 PDNVVYTTLISGFCKS----------------------------GNVSA-AHKLFDEMKQ 383
PD++ Y L+ K GN+ L E+ +
Sbjct: 411 PDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIAR 470
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
K V + LC + A +M+ +G P +Y ++I + + +
Sbjct: 471 KDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIED 530
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
S+ N + + P+V TY I+V+ LCK+
Sbjct: 531 LASLVNIIQELDFVPDVDTYLIVVNELCKK 560
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 141/267 (52%), Gaps = 7/267 (2%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKE 268
G+V +D+ N+ L LC + AI +F+ + + V M+YNI+++ LC+ +V
Sbjct: 149 GLVPGIDTYNILLDALCKSGH-TDNAIELFK-HLKSRVKPELMTYNILINGLCKSRRVGS 206
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
++ +++ G P+ V+Y ++ Y + ++EK L+L +++++G + + ++
Sbjct: 207 VDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVS 266
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVV-YTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
L K G EA + E+ + G ++V Y TL++ + K GN+ A L +E++ K +
Sbjct: 267 ALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLK 326
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
PD ++T +++GL IG A K + + MG++P VT LI G CKAG + A +
Sbjct: 327 PDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Query: 448 HNQMVQKGLTPNVVTYTILVDGLCKRG 474
M + + TYT +V LCK G
Sbjct: 387 FASMEVR----DEFTYTSVVHNLCKDG 409
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 131/264 (49%), Gaps = 3/264 (1%)
Query: 212 VSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHN 271
+S N+ + LC F +RA + + +GV + ++YN ++ + + EA+
Sbjct: 11 ISTKLLNISVNSLC-KFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYA 69
Query: 272 LLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLC 331
+ +M G PDV +Y +ISG + L +VL+L +E+ GL P+ + YN ++
Sbjct: 70 VTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYF 129
Query: 332 KNGEVVEAERVLRE-MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDF 390
K G EA ++L E + G+ P Y L+ CKSG+ A +LF +K ++ P+
Sbjct: 130 KLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPEL 188
Query: 391 VSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQ 450
++Y +++GLCK ++ + E+ G P+ VTYT ++ + K + + + +
Sbjct: 189 MTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK 248
Query: 451 MVQKGLTPNVVTYTILVDGLCKRG 474
M ++G T + +V L K G
Sbjct: 249 MKKEGYTFDGFANCAVVSALIKTG 272
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 6/234 (2%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
+R ++P G+S T NI ++SLC+ ++ A LL+ G +PDV++Y +I G
Sbjct: 2 VRGLMKFP--GIS--TKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKG 57
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
Y + +++ + ++ G+ P+ YN++I KN + ++ EM G+ PD
Sbjct: 58 YTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPD 117
Query: 355 NVVYTTLISGFCKSGNVSAAHK-LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
Y TL+S + K G A K L +++ +VP +Y +L LCK G A +LF
Sbjct: 118 MWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF 177
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
L ++P+ +TY LI G CK+ + + ++ + G TPN VTYT ++
Sbjct: 178 KH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTML 230
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 113/204 (55%), Gaps = 5/204 (2%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN-VPDVVSYGV 290
++ +++F + + G +++ + V+ +L + G+ +EA+ + ++ G D+VSY
Sbjct: 240 EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNT 299
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+++ Y + G L+ V L+EE++ KGL+P++Y + I++ L G AE+ L + + G
Sbjct: 300 LLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMG 359
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ P V LI G CK+G+V A +LF M+ V D +YTS++H LCK G++V A
Sbjct: 360 MQPSVVTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCAS 415
Query: 411 KLFSEMLVMGLEPDEVTYTALIYG 434
KL G++ A++ G
Sbjct: 416 KLLLSCYNKGMKIPSSARRAVLSG 439
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+ E G+ + ++ I+++ L +G A L + G P VV+ +I G C
Sbjct: 316 LLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLC 375
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ G +++ ++L ++ + +E+ Y +++ LCK+G +V A ++L G+ +
Sbjct: 376 KAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSS 431
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMK 382
++SG ++ + AA K ++K
Sbjct: 432 ARRAVLSGIRETVSYQAARKTHIKIK 457
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 123/232 (53%), Gaps = 1/232 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++A+ +F+ G + +YN + L + V EA +L +M G P +Y +
Sbjct: 532 EKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAM 591
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I+ Y ++G L + L E +++ G++PNE VY ++I+ ++G V EA + R M +HGV
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
+++V T+LI + K G + A +++D+MK + PD + SML +G + EA
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAES 711
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
+F+ + G D +++ ++Y + G + EA + +M + GL + ++
Sbjct: 712 IFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSF 762
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 136/310 (43%), Gaps = 40/310 (12%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++L G+ + + N + CG A + ++ E G+S +T +YNI+L
Sbjct: 328 FSEMLKSGVPIDTVTFNTMI-HTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHA 386
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
G ++ A ++ G PD V++ ++ CQ + +V ++ E+ R +R +E+
Sbjct: 387 DAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEH 446
Query: 322 -------VYNN---------------------------IIDLLCKNGEVVEAERVL---R 344
+Y N +ID+ + G VEAE V R
Sbjct: 447 SVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKR 506
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
M+ G D + Y +I + K+ A LF MK + PD +Y S+ L +
Sbjct: 507 NMS--GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVD 564
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
+ EA ++ +EML G +P TY A+I + + G + +A ++ M + G+ PN V Y
Sbjct: 565 LVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYG 624
Query: 465 ILVDGLCKRG 474
L++G + G
Sbjct: 625 SLINGFAESG 634
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G DV+ Y V+I Y + EK L L + ++ +G P+E YN++ +L V EA
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
+R+L EM G P Y +I+ + + G +S A L++ M++ + P+ V Y S+++G
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
+ G + EA + F M G++ + + T+LI + K G + EA ++++M P+
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 460 VVTYTILVDGLC 471
V ++ LC
Sbjct: 690 VAASNSMLS-LC 700
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 2/234 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +F E + GV +T+++N ++H+ G + EA +LL +ME G PD +Y +++S
Sbjct: 324 AANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLS 383
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ G +E L+ ++++ GL P+ + ++ +LC+ V E E V+ EM ++ +
Sbjct: 384 LHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRI 443
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D ++ + G V A LF+ Q V + +++ + G VEA +F
Sbjct: 444 DEHSVPVIMQMYVNEGLVVQAKALFERF-QLDCVLSSTTLAAVIDVYAEKGLWVEAETVF 502
Query: 414 -SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
+ + G D + Y +I + KA +A S+ M +G P+ TY L
Sbjct: 503 YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSL 556
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 74/139 (53%)
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
++ +I Y + G+L L E+ + G+ + +N +I +G + EAE +L++M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
+ G+ PD Y L+S +G++ AA + + ++++ + PD V++ ++LH LC+ +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 407 VEAHKLFSEMLVMGLEPDE 425
E + +EM + DE
Sbjct: 427 AEVEAVIAEMDRNSIRIDE 445
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 2/224 (0%)
Query: 250 TMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLME 309
T ++N ++ + G++ +A NL +M G D V++ +I G L + L++
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 310 ELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSG 369
+++ KG+ P+ YN ++ L G++ A R++ K G+FPD V + ++ C+
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 370 NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYT 429
V+ + EM + I D S ++ G +V+A LF E + T
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF-ERFQLDCVLSSTTLA 483
Query: 430 ALIYGHCKAGEMREAFSI-HNQMVQKGLTPNVVTYTILVDGLCK 472
A+I + + G EA ++ + + G +V+ Y +++ K
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGK 527
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 35/277 (12%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ AI+ FR E GV N + ++ + ++G ++EA + +M+ PDV + +
Sbjct: 637 EEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSM 696
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+S +G + + + L+ KG + + ++ L G + EA V EM + G+
Sbjct: 697 LSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGL 755
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEM-KQKKIVPDFVSYTSMLHGLCKIGKMVEA- 409
D + +++ + G +S +LF EM ++K++ D+ ++ ++ L K G EA
Sbjct: 756 LSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAV 815
Query: 410 -------------------HKLFSEM------------LVMGLEPDE-VTYTALIYGHCK 437
LFS M L G P E Y A+IY +
Sbjct: 816 SQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSA 875
Query: 438 AGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+G++ A + +M +KGL P++VT LV K G
Sbjct: 876 SGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAG 912
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 110/274 (40%), Gaps = 39/274 (14%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A RV+ + + + + N +L LG V EA ++ + G DV+S+ +
Sbjct: 672 EEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATM 730
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH-- 349
+ Y +G L++ +++ EE++ GL + +N ++ +G++ E + EM
Sbjct: 731 MYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERK 790
Query: 350 -----GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK---------------------- 382
G F ++T L G S VS ++E K
Sbjct: 791 LLLDWGTF--KTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYAL 848
Query: 383 -------QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
+I + +Y ++++ G + A K + M GLEPD VT L+ +
Sbjct: 849 ESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIY 908
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
KAG + +H+++ L P+ + + D
Sbjct: 909 GKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDA 942
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
VP+V+ Y +++ + G+ +++ E+ G+ P Y ++D+ K G V EA
Sbjct: 142 VPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALL 201
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKI------VPDFVSYTS 395
++ M + FPD V T++ F SG A + F K+ + DF S
Sbjct: 202 WIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGS 261
Query: 396 ----------MLHGLCKIGKMVEAHKLFSEMLVMGLEPDE----VTYTALIYGHCKAGEM 441
+ L K+G K P + T+ LI + KAG +
Sbjct: 262 AQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRL 321
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILV 467
+A ++ ++M++ G+ + VT+ ++
Sbjct: 322 NDAANLFSEMLKSGVPIDTVTFNTMI 347
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 129/266 (48%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ G+ V + N L G +AI + E P G+ +++ Y VL
Sbjct: 189 FDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICA 248
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
G+ +EA N + QM+ G+ P++ Y +++ Y G +K +LM E++ GL PN+
Sbjct: 249 SNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKV 308
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+ ++ + K G + +L E+ G + + Y L+ G K+G + A +FD+M
Sbjct: 309 MMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDM 368
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K K + D + + M+ LC+ + EA +L + + D V ++ +C+AGEM
Sbjct: 369 KGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEM 428
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILV 467
+ +M ++ ++P+ T+ IL+
Sbjct: 429 ESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 128/252 (50%), Gaps = 4/252 (1%)
Query: 225 CGNFEGKK---RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN 281
C F G K +A+ +++ P+ N N +L L + GK+ L QM+ G
Sbjct: 138 CIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGL 197
Query: 282 VPDVVSYGVIISGYCQIGQ-LEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAE 340
PDVV+Y +++G ++ K ++L+ EL G++ + +Y ++ + NG EAE
Sbjct: 198 KPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAE 257
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGL 400
+++M G P+ Y++L++ + G+ A +L EMK +VP+ V T++L
Sbjct: 258 NFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Query: 401 CKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
K G + +L SE+ G +E+ Y L+ G KAG++ EA SI + M KG+ +
Sbjct: 318 IKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDG 377
Query: 461 VTYTILVDGLCK 472
+I++ LC+
Sbjct: 378 YANSIMISALCR 389
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 110/214 (51%), Gaps = 9/214 (4%)
Query: 269 AHNLLMQMEFCGNVPD------VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
A N+ +E ++PD V I+S + G+L+ +KL ++++R GL+P+
Sbjct: 144 AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVT 203
Query: 323 YNNIID--LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
YN ++ + KNG +A ++ E+ +G+ D+V+Y T+++ +G A +
Sbjct: 204 YNTLLAGCIKVKNG-YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQ 262
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
MK + P+ Y+S+L+ G +A +L +EM +GL P++V T L+ + K G
Sbjct: 263 MKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGL 322
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + +++ G N + Y +L+DGL K G
Sbjct: 323 FDRSRELLSELESAGYAENEMPYCMLMDGLSKAG 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 86/182 (47%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
R+ + E G + N M Y +++ L + GK++EA ++ M+ G D + ++I
Sbjct: 325 RSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMI 384
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
S C+ + ++ +L + + + + + N ++ C+ GE+ R++++M + V
Sbjct: 385 SALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVS 444
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
PD + LI F K A++ +M K + +S+++ L KI EA +
Sbjct: 445 PDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSV 504
Query: 413 FS 414
++
Sbjct: 505 YN 506
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 14/240 (5%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
T S ++ L + G VKEA +M+ PDV +Y II+ C++G +K L+
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 309 EELQRKGLR--PNEYVYNNIIDLLCKNG-----------EVVEAERVLREMTKHGVFPDN 355
+++Q G R P+ Y Y +I C+ G + EA R+ REM G PD
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
V Y LI G CK+ + A +LF++MK K VP+ V+Y S + ++ A ++
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 416 MLVMGLE-PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
M +G P TYT LI+ + EA + +MV+ GL P TY ++ D L G
Sbjct: 344 MKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 281 NVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAE 340
NV S ++ + G +++ L ++ +P+ Y YN II+ LC+ G +A
Sbjct: 161 NVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKAR 220
Query: 341 RVLREMTKHGVF--PDNVVYTTLISGFCKSGNVSA-----------AHKLFDEMKQKKIV 387
+L +M G PD YT LIS +C+ G + A+++F EM + V
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
PD V+Y ++ G CK ++ A +LF +M G P++VTY + I + E+ A +
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEM 340
Query: 448 HNQMVQKG-LTPNVVTYTILVDGL 470
M + G P TYT L+ L
Sbjct: 341 MRTMKKLGHGVPGSSTYTPLIHAL 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 17/218 (7%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F+++ Y V + N + LC GNF+ K R + + P +T +Y I++ S
Sbjct: 188 FYRMKEYHCKPDVYAYNTIINALCRVGNFK-KARFLLDQMQLPGFRYPPDTYTYTILISS 246
Query: 260 LCQLG-----------KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
C+ G ++ EA+ + +M F G VPDVV+Y +I G C+ ++ + L+L
Sbjct: 247 YCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELF 306
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK--HGVFPDNVVYTTLISGFC 366
E+++ KG PN+ YN+ I E+ A ++R M K HGV P + YT LI
Sbjct: 307 EDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIHALV 365
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
++ + A L EM + +VP +Y + L G
Sbjct: 366 ETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 117/224 (52%), Gaps = 2/224 (0%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
YN+++ + V +A L +M+ PD +Y +I+ + + GQ + LM+++
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
R + P+ YNN+I+ +G EA V ++MT +GV PD V + ++S + S
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE--PDEVTYTA 430
A F+ MK K+ PD ++ +++ L K+G+ +A LF+ M E PD VT+T+
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+++ + GE+ ++ MV +GL PN+V+Y L+ G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 6/324 (1%)
Query: 154 RLDVHHLFDQFTERLIYTYKDWGAHP--LVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIV 211
RL H + L + + W P +D +L I
Sbjct: 151 RLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIA 210
Query: 212 VSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHN 271
S + N L CG+ + A+ V ++ + GV + +++NIVL + + +A +
Sbjct: 211 PSRSTYN-NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 269
Query: 272 LLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL--QRKGLRPNEYVYNNIIDL 329
M+ PD ++ +II ++GQ + L L + +R RP+ + +I+ L
Sbjct: 270 YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHL 329
Query: 330 LCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
GE+ V M G+ P+ V Y L+ + G A + ++KQ I+PD
Sbjct: 330 YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 389
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
VSYT +L+ + + +A ++F M +P+ VTY ALI + G + EA I
Sbjct: 390 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 450 QMVQKGLTPNVVTYTILVDGLCKR 473
QM Q G+ PNVV+ L+ C R
Sbjct: 450 QMEQDGIKPNVVSVCTLL-AACSR 472
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 41/269 (15%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
VF G+ N +SYN ++ + G A ++L ++ G +PDVVSY +++ Y
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 297 ---QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Q G+ ++V +M + +RK PN YN +ID NG + EA + R+M + G+ P
Sbjct: 402 RSRQPGKAKEVFLMMRKERRK---PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 354 DNV-----------------------------------VYTTLISGFCKSGNVSAAHKLF 378
+ V Y + I + + + A L+
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 518
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
M++KK+ D V++T ++ G C++ K EA EM + + + Y++++ + K
Sbjct: 519 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 578
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILV 467
G++ EA SI NQM G P+V+ YT ++
Sbjct: 579 GQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 10/250 (4%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
+++Y ++ N FL A+ +FR+ + G+ N +S +L + +
Sbjct: 425 VVTYNALIDAYGSNGFLAE----------AVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 474
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K +L + G + +Y I Y +LEK + L + +++K ++ + +
Sbjct: 475 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I C+ + EA L+EM + VY++++ + K G V+ A +F++MK
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD ++YTSMLH K +A +LF EM G+EPD + +AL+ K G+
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654
Query: 445 FSIHNQMVQK 454
F + + M +K
Sbjct: 655 FVLMDLMREK 664
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 134/277 (48%), Gaps = 37/277 (13%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLL--MQMEFCGNVPDVVSYGV 290
+A+ F V +T ++NI+++ L +LG+ +A +L M+ + PDVV++
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
I+ Y G++E + E + +GL+PN YN ++ +G A VL ++ ++G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ PD V YT L++ + +S A ++F M++++ P+ V+Y +++ G + EA
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 445
Query: 411 KLFSEMLVMGLEPDEVT-----------------------------------YTALIYGH 435
++F +M G++P+ V+ Y + I +
Sbjct: 446 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 505
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
A E+ +A +++ M +K + + VT+TIL+ G C+
Sbjct: 506 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N ++YN ++ + G + EA + QME G P+VVS +++ + + V ++
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
Q +G+ N YN+ I E+ +A + + M K V D+V +T LISG C+
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
A EM+ I Y+S+L K G++ EA +F++M + G EPD + Y
Sbjct: 544 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
T++++ + + + +A + +M G+ P+ + + L+ K G
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 7/207 (3%)
Query: 202 FHKLLSYGI---VVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLH 258
F ++ GI VVSV C L C + K V G++ NT +YN +
Sbjct: 448 FRQMEQDGIKPNVVSV--CTLLAA--CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 259 SLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
S ++++A L M D V++ ++ISG C++ + + + ++E++ +
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 563
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
+ VY++++ K G+V EAE + +M G PD + YT+++ + S A +LF
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGK 405
EM+ I PD ++ ++++ K G+
Sbjct: 624 LEMEANGIEPDSIACSALMRAFNKGGQ 650
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%)
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+YN +I L ++ V +A + EM K PD Y LI+ ++G A L D+M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ I P +Y ++++ G EA ++ +M G+ PD VT+ ++ + +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A S M + P+ T+ I++ L K G
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLG 297
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 4/243 (1%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
KR I V + G+ + +N +L L + +M G DV +YG++
Sbjct: 129 KRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGIL 188
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G ++ KL++ ++ G+ PN VYN ++ LCKNG+V A ++ EM +
Sbjct: 189 MKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE--- 245
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P++V + LIS +C + + L ++ VPD V+ T ++ LC G++ EA +
Sbjct: 246 -PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+ + G + D V L+ G+C G+MR A +M +KG PNV TY +L+ G C
Sbjct: 305 VLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC 364
Query: 472 KRG 474
G
Sbjct: 365 DVG 367
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 10/258 (3%)
Query: 221 LTRLCGNFEGKKRAIRVFR---EYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM- 276
+ RL + + A+ FR +P G + +Y + H LC + + LL +M
Sbjct: 46 IVRLILDQKSASGALETFRWASTFP--GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMP 103
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
+ G PD + II G+ + +++V+ +++ + + G++P+ V+N+I+D+L K
Sbjct: 104 DSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDID 163
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
+ E R+M G+ D Y L+ G + + KL MK + P+ V Y ++
Sbjct: 164 IAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTL 223
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
LH LCK GK+ A L SEM EP++VT+ LI +C ++ ++ + + G
Sbjct: 224 LHALCKNGKVGRARSLMSEM----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGF 279
Query: 457 TPNVVTYTILVDGLCKRG 474
P+VVT T +++ LC G
Sbjct: 280 VPDVVTVTKVMEVLCNEG 297
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
GV+ N + YN +LH+LC+ GKV A +L+ +M+ P+ V++ ++IS YC +L +
Sbjct: 212 GVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQS 267
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+ L+E+ G P+ ++++LC G V EA VL + G D V TL+ G
Sbjct: 268 MVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKG 327
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+C G + A + F EM++K +P+ +Y ++ G C +G + A F++M + +
Sbjct: 328 YCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWN 387
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQM 451
T+ LI G G + I M
Sbjct: 388 FATFNTLIRGLSIGGRTDDGLKILEMM 414
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R+ G+ + +Y I++ L ++ + LL M+ G P+ V Y ++ C+
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
G++ + LM E++ PN+ +N +I C +++++ +L + G PD V
Sbjct: 231 GKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTV 286
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
T ++ C G VS A ++ + ++ K D V+ +++ G C +GKM A + F EM
Sbjct: 287 TKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMER 346
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G P+ TY LI G+C G + A N M + N T+ L+ GL G
Sbjct: 347 KGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 11/277 (3%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEVGVSWNTMSYNIVLHSL 260
K S G V V + + LC EG+ A+ V G + ++ N ++
Sbjct: 271 LEKCFSLGFVPDVVTVTKVMEVLCN--EGRVSEALEVLERVESKGGKVDVVACNTLVKGY 328
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
C LGK++ A ++ME G +P+V +Y ++I+GYC +G L+ L +++ +R N
Sbjct: 329 CALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNF 388
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREM----TKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
+N +I L G + ++L M T HG D Y +I GF K A +
Sbjct: 389 ATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP--YNCVIYGFYKENRWEDALE 446
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+K +K+ P V + L LC+ G M + + +M+ G P + LI+ +
Sbjct: 447 FL--LKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYS 504
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ G++ E+ + N MV +G P T+ ++ G CK+
Sbjct: 505 QHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQ 541
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 126/268 (47%), Gaps = 5/268 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ G + +V++ NL + C + A+ F + + WN ++N ++ L
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYC-DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLS 399
Query: 262 QLGKVKEAHNLLMQMEFCGNV--PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
G+ + +L M+ V + Y +I G+ + + E L+ + ++++ R
Sbjct: 400 IGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAV 459
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
+ + I LC+ G + + + +M G P +V LI + + G + + +L +
Sbjct: 460 DRSFKLIS--LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELIN 517
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
+M + +P ++ +++ G CK K++ K +M G PD +Y L+ C G
Sbjct: 518 DMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKG 577
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILV 467
++++A+ + ++MV+K + P+ ++ L+
Sbjct: 578 DIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 257 LHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL 316
L SLC+ G + + QM G VP ++ +I Y Q G++E+ L+L+ ++ +G
Sbjct: 465 LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGY 524
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
P +N +I CK +V+ + + +M + G PD Y L+ C G++ A
Sbjct: 525 LPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWL 584
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCK 402
LF M +K IVPD ++S++ L +
Sbjct: 585 LFSRMVEKSIVPDPSMWSSLMFCLSQ 610
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
YN V++ + + ++A L++ME P V + C+ G ++ + +++
Sbjct: 428 YNCVIYGFYKENRWEDALEFLLKMEKL--FPRAVDRSFKLISLCEKGGMDDLKTAYDQMI 485
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+G P+ V + +I ++G++ E+ ++ +M G P + + +I GFCK V
Sbjct: 486 GEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVM 545
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
K ++M ++ VPD SY +L LC G + +A LFS M+ + PD +++L+
Sbjct: 546 NGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Query: 433 Y 433
+
Sbjct: 606 F 606
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 143/271 (52%), Gaps = 3/271 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F+ + Y + ++ + N L+ LC + + ++A VF + + ++ +Y+I+L
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCKS-KNVRKAQEVFENMRD-RFTPDSKTYSILLEGWG 248
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ + +A + +M G PD+V+Y +++ C+ G++++ L ++ + +P +
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+Y+ ++ + EA EM + G+ D V+ +LI FCK+ + +++ EM
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K K + P+ S +L L + G+ EA +F +M+ + EPD TYT +I C+ EM
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEM 427
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
A + M +KG+ P++ T+++L++GLC+
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLCE 458
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A VFRE + G + ++Y+I++ LC+ G+V EA ++ M+ P Y V++
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
Y +LE+ + E++R G++ + V+N++I CK + RVL+EM GV
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
P++ ++ + G A +F +M K PD +YT ++ C+ +M A K+
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKV 433
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ M G+ P T++ LI G C+ ++A + +M++ G+ P+ VT+ L L K
Sbjct: 434 WKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIK 493
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N ++ IV+ + KV EA ME P++V++ ++S C+ + K ++
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
E + R P+ Y+ +++ K + +A V REM G PD V Y+ ++ CK+
Sbjct: 227 ENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G V A + M P Y+ ++H ++ EA F EM G++ D +
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+LI CKA M+ + + +M KG+TPN + I++ L +RG
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 391
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 145/305 (47%), Gaps = 43/305 (14%)
Query: 212 VSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHN 271
V+V + + LT LC A+ V R++PE V +T++YN+V+ G + A
Sbjct: 128 VNVKTMRIVLT-LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADM 186
Query: 272 LLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLC 331
L+ +M+ G PDV++Y +I+GYC G+++ +L +E+ + N Y+ I++ +C
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 332 KNGEVVEAERVLREMTKHG----VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
K+G++ A +L EM K + P+ V YT +I FC+ V A + D M + +
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 388 PDFVSYTSMLHGLCK-----------IGKMV-------------------------EAHK 411
P+ V+ ++ G+ + I K+V EA K
Sbjct: 307 PNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEK 366
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT--YTILVDG 469
+F MLV G+ PD + + + C + F ++ ++ +K + + + + +L+ G
Sbjct: 367 IFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLG 426
Query: 470 LCKRG 474
LC++G
Sbjct: 427 LCQQG 431
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 2/159 (1%)
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS-AAH 375
R + Y+Y D+L + + V+ K F NV ++ C N++ A
Sbjct: 92 RHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFV-NVKTMRIVLTLCNQANLADEAL 150
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
+ + + + D V+Y ++ G + A L EM +GL PD +TYT++I G+
Sbjct: 151 WVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGY 210
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
C AG++ +A+ + +M + N VTY+ +++G+CK G
Sbjct: 211 CNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSG 249
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 234 AIRVFREYPE----VGVSW--NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
A+ +F+E E G S+ + +YN ++H LC GK K+A + +++ G+ PD +
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
Y ++I G C+ +++ +++ E+Q G P+ VYN ++D K +V EA ++ +M
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
+ GV Y LI G ++G A LF ++K+K D ++++ + LC+ GK+
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
A KL EM G D VT ++L+ G K G + + + L PNV+ + V
Sbjct: 447 GAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Query: 468 DGLCKR 473
+ KR
Sbjct: 507 EASLKR 512
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 119/233 (51%), Gaps = 6/233 (2%)
Query: 248 WNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV------PDVVSYGVIISGYCQIGQL 301
++T SYNI +H G + A +L +M+ +V PD+ +Y +I C G+
Sbjct: 246 FDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKA 305
Query: 302 EKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTL 361
+ L + +EL+ G P+ Y +I CK+ + +A R+ EM +G PD +VY L
Sbjct: 306 KDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCL 365
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
+ G K+ V+ A +LF++M Q+ + +Y ++ GL + G+ LF ++ G
Sbjct: 366 LDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQ 425
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
D +T++ + C+ G++ A + +M +G + ++VT + L+ G K+G
Sbjct: 426 FVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQG 478
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 3/238 (1%)
Query: 208 YGIVVSVDSC--NLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGK 265
YG D C N + LC F K A+ V+ E G + +Y I++ C+ +
Sbjct: 281 YGSSFGPDICTYNSLIHVLC-LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYR 339
Query: 266 VKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN 325
+ +A + +M++ G VPD + Y ++ G + ++ + +L E++ ++G+R + + YN
Sbjct: 340 MDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNI 399
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
+ID L +NG + ++ K G F D + ++ + C+ G + A KL +EM+ +
Sbjct: 400 LIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRG 459
Query: 386 IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
D V+ +S+L G K G+ KL + L P+ + + A + K + ++
Sbjct: 460 FSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD 517
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 1/184 (0%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP-NEYVYNNIIDLLCKNGEVVEAERV 342
DV +S Y G L KL E G+ Y YN+++ K G A V
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
L +M ++ D Y +I G K G A + D + ++ D V Y ++++ L K
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
++ EA +LF M G+ PD V+Y +I + KAG+++EA+ M+ G PN VT
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Query: 463 YTIL 466
TIL
Sbjct: 773 DTIL 776
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 281 NVPDVVSY--GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
V D+ SY ++S + + G + +++++ + YN II L K G
Sbjct: 624 GVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADL 683
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A VL +TK G + D V+Y TLI+ K+ + A +LFD MK I PD VSY +M+
Sbjct: 684 ASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE 743
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
K GK+ EA+K ML G P+ VT T L Y
Sbjct: 744 VNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDY 778
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 57/285 (20%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G + +Y+ + ++C+ G + E +LL M+ G D +++ + G+ E
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG-------------- 350
L +++ ++ G N VY++++ L K E+ A +L ++ +
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 351 -VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK-QKKIVPDFVSYT-------------- 394
P V L+ G ++ S ++F+++K K+ D SY
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDA 266
Query: 395 ---------------------------SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
S++H LC GK +A ++ E+ V G EPD T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
Y LI G CK+ M +A I+ +M G P+ + Y L+DG K
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLK 371
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 4/167 (2%)
Query: 312 QRKGLRPNEY---VYNNIIDLLCKNGEVVEAERVLREMTKHGVFP-DNVVYTTLISGFCK 367
QR +P+ + + N + + G++ A ++ GV + Y +++S F K
Sbjct: 583 QRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVK 642
Query: 368 SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
G A + D+M + D +Y ++ GL K+G+ A + + G D V
Sbjct: 643 KGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVM 702
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
Y LI KA + EA + + M G+ P+VV+Y +++ K G
Sbjct: 703 YNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAG 749
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
+YN+++ L ++G+ A +L ++ G D+V Y +I+ + +L++ +L + +
Sbjct: 667 TYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHM 726
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTL 361
+ G+ P+ YN +I++ K G++ EA + L+ M G P++V T L
Sbjct: 727 KSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 117/224 (52%), Gaps = 2/224 (0%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
YN+++ + V +A L +M+ PD +Y +I+ + + GQ + LM+++
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
R + P+ YNN+I+ +G EA V ++MT +GV PD V + ++S + S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE--PDEVTYTA 430
A F+ MK K+ PD ++ +++ L K+G+ +A LF+ M E PD VT+T+
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+++ + GE+ ++ MV +GL PN+V+Y L+ G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 237
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 6/324 (1%)
Query: 154 RLDVHHLFDQFTERLIYTYKDWGAHP--LVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIV 211
RL H + L + + W P +D +L I
Sbjct: 19 RLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIA 78
Query: 212 VSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHN 271
S + N L CG+ + A+ V ++ + GV + +++NIVL + + +A +
Sbjct: 79 PSRSTYN-NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 137
Query: 272 LLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL--QRKGLRPNEYVYNNIIDL 329
M+ PD ++ +II ++GQ + L L + +R RP+ + +I+ L
Sbjct: 138 YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHL 197
Query: 330 LCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
GE+ V M G+ P+ V Y L+ + G A + ++KQ I+PD
Sbjct: 198 YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 257
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
VSYT +L+ + + +A ++F M +P+ VTY ALI + G + EA I
Sbjct: 258 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 317
Query: 450 QMVQKGLTPNVVTYTILVDGLCKR 473
QM Q G+ PNVV+ L+ C R
Sbjct: 318 QMEQDGIKPNVVSVCTLL-AACSR 340
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 41/269 (15%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
VF G+ N +SYN ++ + G A ++L ++ G +PDVVSY +++ Y
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 297 ---QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Q G+ ++V +M + +RK PN YN +ID NG + EA + R+M + G+ P
Sbjct: 270 RSRQPGKAKEVFLMMRKERRK---PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326
Query: 354 DNV-----------------------------------VYTTLISGFCKSGNVSAAHKLF 378
+ V Y + I + + + A L+
Sbjct: 327 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 386
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKA 438
M++KK+ D V++T ++ G C++ K EA EM + + + Y++++ + K
Sbjct: 387 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 446
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILV 467
G++ EA SI NQM G P+V+ YT ++
Sbjct: 447 GQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 10/250 (4%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
+++Y ++ N FL A+ +FR+ + G+ N +S +L + +
Sbjct: 293 VVTYNALIDAYGSNGFLAE----------AVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 342
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
K +L + G + +Y I Y +LEK + L + +++K ++ + +
Sbjct: 343 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 402
Query: 325 NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+I C+ + EA L+EM + VY++++ + K G V+ A +F++MK
Sbjct: 403 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 462
Query: 385 KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
PD ++YTSMLH K +A +LF EM G+EPD + +AL+ K G+
Sbjct: 463 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 522
Query: 445 FSIHNQMVQK 454
F + + M +K
Sbjct: 523 FVLMDLMREK 532
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 134/277 (48%), Gaps = 37/277 (13%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLL--MQMEFCGNVPDVVSYGV 290
+A+ F V +T ++NI+++ L +LG+ +A +L M+ + PDVV++
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
I+ Y G++E + E + +GL+PN YN ++ +G A VL ++ ++G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ PD V YT L++ + +S A ++F M++++ P+ V+Y +++ G + EA
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 411 KLFSEMLVMGLEPDEVT-----------------------------------YTALIYGH 435
++F +M G++P+ V+ Y + I +
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
A E+ +A +++ M +K + + VT+TIL+ G C+
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N ++YN ++ + G + EA + QME G P+VVS +++ + + V ++
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
Q +G+ N YN+ I E+ +A + + M K V D+V +T LISG C+
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
A EM+ I Y+S+L K G++ EA +F++M + G EPD + Y
Sbjct: 412 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
T++++ + + + +A + +M G+ P+ + + L+ K G
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 7/207 (3%)
Query: 202 FHKLLSYGI---VVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLH 258
F ++ GI VVSV C L C + K V G++ NT +YN +
Sbjct: 316 FRQMEQDGIKPNVVSV--CTLLAA--CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 259 SLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
S ++++A L M D V++ ++ISG C++ + + + ++E++ +
Sbjct: 372 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 431
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
+ VY++++ K G+V EAE + +M G PD + YT+++ + S A +LF
Sbjct: 432 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 491
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGK 405
EM+ I PD ++ ++++ K G+
Sbjct: 492 LEMEANGIEPDSIACSALMRAFNKGGQ 518
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%)
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+YN +I L ++ V +A + EM K PD Y LI+ ++G A L D+M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ I P +Y ++++ G EA ++ +M G+ PD VT+ ++ + +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A S M + P+ T+ I++ L K G
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLG 165
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%)
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
N +Y +I + V A LF EM++ PD +Y ++++ + G+ A L
Sbjct: 11 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ML + P TY LI +G REA + +M G+ P++VT+ I++
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSA 125
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 84/135 (62%)
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
R + P YN++ID CK V +A+R+L M G PD V ++TLI+G+CK+ V
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
++F EM ++ IV + V+YT+++HG C++G + A L +EM+ G+ PD +T+ ++
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 433 YGHCKAGEMREAFSI 447
G C E+R+AF+I
Sbjct: 123 AGLCSKKELRKAFAI 137
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 76/128 (59%)
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M + +FP + Y ++I GFCK V A ++ D M K PD V+++++++G CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ ++F EM G+ + VTYT LI+G C+ G++ A + N+M+ G+ P+ +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 466 LVDGLCKR 473
++ GLC +
Sbjct: 121 MLAGLCSK 128
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 75/134 (55%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P ++Y +I G+C+ +++ ++++ + KG P+ ++ +I+ CK V +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
EM + G+ + V YTTLI GFC+ G++ AA L +EM + PD++++ ML GLC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 403 IGKMVEAHKLFSEM 416
++ +A + ++
Sbjct: 128 KKELRKAFAILEDL 141
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 77/137 (56%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
T++YN ++ C+ +V +A +L M G PDVV++ +I+GYC+ +++ +++
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
E+ R+G+ N Y +I C+ G++ A+ +L EM GV PD + + +++G C
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 369 GNVSAAHKLFDEMKQKK 385
+ A + +++++ +
Sbjct: 129 KELRKAFAILEDLQKSE 145
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 386 IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
I P ++Y SM+ G CK ++ +A ++ M G PD VT++ LI G+CKA +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 446 SIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
I +M ++G+ N VTYT L+ G C+ G
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVG 94
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 220 FLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
F T + G + K+ + +F E G+ NT++Y ++H CQ+G + A +LL +M
Sbjct: 48 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 107
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
CG PD +++ +++G C +L K ++E+LQ+
Sbjct: 108 SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A R+ G S + ++++ +++ C+ +V + +M G V + V+Y +I
Sbjct: 29 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 88
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
G+CQ+G L+ L+ E+ G+ P+ ++ ++ LC E+ +A +L ++ K
Sbjct: 89 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 146/370 (39%), Gaps = 66/370 (17%)
Query: 163 QFTERLIYTYKDWGAH-------PLVFDVFFQXXXXXXXXXXXXXXFHKLLSY-----GI 210
Q+ E+ + + W H P+ ++ +L Y
Sbjct: 136 QYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKT 195
Query: 211 VVSVDSCNLFLTRLCGNFE------GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
VV VD L + C + K++ IRV + PE+ ++N++L +LC+ G
Sbjct: 196 VVLVDVLLEILRKYCERYLTHVQKFAKRKRIRV-KTQPEIN------AFNMLLDALCKCG 248
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
VKE LL +M PD ++ V+ G+C++ +K +KL+EE+ G +P + Y
Sbjct: 249 LVKEGEALLRRMRHRVK-PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYC 307
Query: 325 NIIDLLCKNGEVVEAE--------------------------------------RVLREM 346
ID C+ G V EA ++ M
Sbjct: 308 AAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRM 367
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
G PD Y +I G C + V A+K DEM K PD V+Y L LC+ K
Sbjct: 368 ISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKT 427
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
EA KL+ M+ P TY LI + + AF+ +M ++ +V TY +
Sbjct: 428 DEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAM 487
Query: 467 VDGL--CKRG 474
++GL C R
Sbjct: 488 INGLFDCHRA 497
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 97/200 (48%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
++ +++ +L + K +E L+ +M G +PDV +Y +I G C ++++ K ++E+
Sbjct: 343 TFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
KG P+ YN + +LC+N + EA ++ M + P Y LIS F + +
Sbjct: 403 SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDP 462
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A + EM ++ V D +Y +M++GL + EA L E++ GL+ + +
Sbjct: 463 DGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSF 522
Query: 432 IYGHCKAGEMREAFSIHNQM 451
+ + G ++ + M
Sbjct: 523 LMRLSEVGNLKAIHKVSEHM 542
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 131/253 (51%), Gaps = 3/253 (1%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
+ G E + + E V V N ++N+++ + C+ KV+EA ++ +ME CG P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEE--LQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
D V+Y I + Y Q G+ + + E + ++ +PN ++ C+ G V + R
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
+R M + V + VV+ +LI+GF + + ++ MK+ + D ++Y+++++
Sbjct: 282 FVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWS 341
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
G M +A ++F EM+ G++PD Y+ L G+ +A E ++A + ++ + PNVV
Sbjct: 342 SAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVV 400
Query: 462 TYTILVDGLCKRG 474
+T ++ G C G
Sbjct: 401 IFTTVISGWCSNG 413
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 121/237 (51%), Gaps = 4/237 (1%)
Query: 216 SCNLFLTRLCGNFEGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLM 274
+C + + C EG+ R +R R E+ V N + +N +++ ++ +L
Sbjct: 262 TCGIVVGGYC--REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLT 319
Query: 275 QMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNG 334
M+ C DV++Y +++ + G +EK ++ +E+ + G++P+ + Y+ + +
Sbjct: 320 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
E +AE +L + P+ V++TT+ISG+C +G++ A ++F++M + + P+ ++
Sbjct: 380 EPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFE 438
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM 451
+++ G ++ + +A ++ M G++P+ T+ L AG E+ N +
Sbjct: 439 TLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 495
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A VF+ E G + +SY +L ++ + +++ ++E G D + + +I+
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG--- 350
+ + G +E ++ + +++ GL P YN +I G+ + +L M + G
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD 183
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
V P+ + L+ +CK V A ++ +M++ + PD V+Y ++ + G+ V A
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 411 KLFSEMLVM--GLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
E +VM +P+ T ++ G+C+ G +R+ +M + + N+V + L++
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 469 GL 470
G
Sbjct: 304 GF 305
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
++++L + G EA+ V + + + G P + YTTL++ + + E++Q
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 386 IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
D + + ++++ + G M +A + +M +GL P TY LI G+ AG+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 446 SIHNQMVQKG---LTPNVVTYTILVDGLCKR 473
+ + M+++G + PN+ T+ +LV CK+
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 311 LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
L G RP+ Y ++ + + ++ E+ + G D++ + +I+ F +SGN
Sbjct: 71 LAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGN 130
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMG---LEPDEVT 427
+ A + +MK+ + P +Y +++ G GK + +L ML G + P+ T
Sbjct: 131 MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRT 190
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ L+ CK ++ EA+ + +M + G+ P+ VTY + ++G
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
E V + ++Y+ V+++ G +++A + +M G PD +Y ++ GY + + +
Sbjct: 323 ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 382
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
K +L+E L + RPN ++ +I C NG + +A RV +M K GV P+ + TL+
Sbjct: 383 KAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
G+ + A ++ M+ + P+ ++ + G E++K + + +E
Sbjct: 442 WGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIE 501
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 117/223 (52%), Gaps = 1/223 (0%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQ-LEKVLKLMEE 310
+Y +LH+ + GK ++A +L +M+ G P +V+Y VI+ + ++G+ K+L +++E
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 311 LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
++ KGL+ +E+ + ++ + G + EA+ E+ G P V Y L+ F K+G
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTA 430
+ A + EM++ D V+Y ++ + G EA + M G+ P+ +TYT
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+I + KAG+ EA + M + G PN TY ++ L K+
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK 434
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 140/308 (45%), Gaps = 36/308 (11%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ S G D+ N ++ G + A +++ E G + +YN +L++L
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAY-GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQ---LEKVLKLMEELQ------ 312
+ G + N++ M+ G P SY +++ Y + G +E++ ++E Q
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 313 --------------------------RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+ G +P+ ++N+++ + +N +AE +L +
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI 657
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
+ G+ PD V Y +L+ + + G A ++ +++ ++ PD VSY +++ G C+ G M
Sbjct: 658 REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLM 717
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
EA ++ SEM G+ P TY + G+ G E + M + PN +T+ ++
Sbjct: 718 QEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMV 777
Query: 467 VDGLCKRG 474
VDG C+ G
Sbjct: 778 VDGYCRAG 785
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 118/241 (48%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V +E E ++++YN ++ + + G KEA ++ M G +P+ ++Y +I
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Y + G+ ++ LKL ++ G PN YN ++ LL K E ++L +M +G P
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + T+++ G +++F EMK PD ++ +++ + G V+A K++
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
EM G TY AL+ + G+ R ++ + M KG P +Y++++ K
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKG 574
Query: 474 G 474
G
Sbjct: 575 G 575
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 35/278 (12%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++ + V E G+ ++ + + VL + + G ++EA +++ CG P V+Y +
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ + + G + L +++E++ + YN ++ + G EA V+ MTK GV
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE--- 408
P+ + YTT+I + K+G A KLF MK+ VP+ +Y ++L L K + E
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 409 --------------------------------AHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+++F EM G EPD T+ LI +
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ G +A ++ +M + G V TY L++ L ++G
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV-VEAERV 342
DV +Y I+ Y + G+ EK + L E ++ G P YN I+D+ K G + V
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
L EM G+ D +T++S + G + A + F E+K P V+Y ++L K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
G EA + EM D VTY L+ + +AG +EA + M +KG+ PN +T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 463 YTILVDGLCKRG 474
YT ++D K G
Sbjct: 389 YTTVIDAYGKAG 400
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
LCGN K RVFRE G + ++N ++ + + G +A + +M G
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
V +Y +++ + G ++ +++ KG +P E Y+ ++ K G + ER+
Sbjct: 525 CVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIE 584
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+ + +FP ++ TL+ K ++ + + F K+ PD V + SML +
Sbjct: 585 NRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRN 644
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
+A + + GL PD VTY +L+ + + GE +A I + + L P++V+Y
Sbjct: 645 NMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY 704
Query: 464 TILVDGLCKRG 474
++ G C+RG
Sbjct: 705 NTVIKGFCRRG 715
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A V + GV N ++Y V+ + + GK EA L M+ G VP+ +Y +
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+S + + +++K++ +++ G PN +N ++ L G RV REM G
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGF 487
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD + TLIS + + G+ A K++ EM + +Y ++L+ L + G
Sbjct: 488 EPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGEN 547
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
+ S+M G +P E +Y+ ++ + K G I N++ + + P+
Sbjct: 548 VISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 113/221 (51%), Gaps = 5/221 (2%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ-LGKVKEAHNLLMQMEFCGNVPD 284
GN+ G +R +E ++ SW + ++ + C+ L + A L + G PD
Sbjct: 575 GNYLGIERIENRIKE-GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH---GYKPD 630
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
+V + ++S + + ++ ++E ++ GL P+ YN+++D+ + GE +AE +L+
Sbjct: 631 MVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILK 690
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
+ K + PD V Y T+I GFC+ G + A ++ EM ++ I P +Y + + G +G
Sbjct: 691 TLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
E + M P+E+T+ ++ G+C+AG+ EA
Sbjct: 751 MFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 123/273 (45%), Gaps = 1/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F+ + G V + + N L+ L G I++ + G S N ++N +L
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLS-LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCG 467
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
G K + + +M+ CG PD ++ +IS Y + G K+ E+ R G
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT 527
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +++ L + G+ E V+ +M G P Y+ ++ + K GN ++ + +
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K+ +I P ++ ++L K + + + F+ G +PD V + +++ +
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMY 647
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A I + + GL+P++VTY L+D +RG
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 97/192 (50%), Gaps = 3/192 (1%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
C G +RA +F+++ G + + +N +L + +A +L + G PD
Sbjct: 609 CRALAGSERAFTLFKKH---GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
+V+Y ++ Y + G+ K ++++ L++ L+P+ YN +I C+ G + EA R+L
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
EMT+ G+ P Y T +SG+ G + + + M + P+ +++ ++ G C+ G
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Query: 405 KMVEAHKLFSEM 416
K EA S++
Sbjct: 786 KYSEAMDFVSKI 797
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 76/140 (54%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
E G+S + ++YN ++ + G+ +A +L +E PD+VSY +I G+C+ G ++
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ ++++ E+ +G+RP + YN + G E E V+ M K+ P+ + + ++
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVV 778
Query: 363 SGFCKSGNVSAAHKLFDEMK 382
G+C++G S A ++K
Sbjct: 779 DGYCRAGKYSEAMDFVSKIK 798
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEEL----QRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
D+VS ++ G G E+ + L E L L+ + V + +L + + A
Sbjct: 138 DLVS---LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVA 194
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
++L ++ D YTT++ + ++G A LF+ MK+ P V+Y +L
Sbjct: 195 AKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDV 254
Query: 400 LCKIGK------------------------------------MVEAHKLFSEMLVMGLEP 423
K+G+ + EA + F+E+ G EP
Sbjct: 255 FGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEP 314
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
VTY AL+ KAG EA S+ +M + + VTY LV + G
Sbjct: 315 GTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 119/225 (52%), Gaps = 5/225 (2%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNV---PDVVSYGVIISGYCQIGQLEKVLKLME 309
Y ++ + G+V + +L M + PD V+Y ++S + G +++ +++
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 310 ELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH-GVFPDNVVYTTLISGFCKS 368
E+ R G+ N YN ++ CK ++ AE +LREMT+ G+ PD V Y +I G
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV-MGLEPDEVT 427
+ + A F+EM+ + I P +SYT+++ G+ A+++F EM+ ++ D +
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ L+ G+C+ G + +A + ++M + G PNV TY L +G+ +
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ 641
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
G R + R + + ++Y V+ + G + A +L +M G +
Sbjct: 428 GRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANR 487
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEEL-QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
++Y V++ GYC+ Q+++ L+ E+ + G+ P+ YN IID + A
Sbjct: 488 ITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFN 547
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE-MKQKKIVPDFVSYTSMLHGLCKI 403
EM G+ P + YTTL+ F SG A+++FDE M ++ D +++ ++ G C++
Sbjct: 548 EMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRL 607
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK 454
G + +A ++ S M G P+ TY +L G +A + +A + ++ ++
Sbjct: 608 GLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 21/252 (8%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM-EFCGNVPDVVSYGVI 291
RA +V E +GV N ++YN++L C+ ++ A +LL +M E G PDVVSY +I
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG- 350
I G I L E++ +G+ P + Y ++ +G+ A RV EM
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
V D + + L+ G+C+ G + A ++ MK+ P+ +Y S+ +G+ + K +A
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 411 KLFSEM-------------------LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM 451
L+ E+ L+PDE L +A ++A I M
Sbjct: 650 LLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACM 709
Query: 452 VQKGLTPNVVTY 463
+ G+ PN Y
Sbjct: 710 EENGIPPNKTKY 721
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTKH---GVFPDNVVYTTLISGFCKSGNVSAA 374
P+ +Y ++ KNG V + R+L M + PD V YTT++S F +G + A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV-MGLEPDEVTYTALIY 433
++ EM + + + ++Y +L G CK ++ A L EM G+EPD V+Y +I
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G + A + N+M +G+ P ++YT L+ G
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSG 572
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 44/284 (15%)
Query: 233 RAIRVFREYPEVGVSW-NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
R ++ F + VG S +T ++N VL++ LG + L +M PDV++Y V+
Sbjct: 218 RRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVM 277
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH-- 349
I ++G+ E ++ ++E + KG++ ++++ G++ AER+++ M +
Sbjct: 278 IKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRR 337
Query: 350 ---------------------GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ----- 383
++ SG+ VS + D K+
Sbjct: 338 DLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSE-EGVVDVFKKLLPNS 396
Query: 384 -----------KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVM---GLEPDEVTYT 429
K PD YT+++ G K G++ + ++ M PDEVTYT
Sbjct: 397 VDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYT 456
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
++ AG M A + +M + G+ N +TY +L+ G CK+
Sbjct: 457 TVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQ 500
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM-EFCGNVPDVVSYGVII 292
++RVFR+ + +S S N +L + KEA + ++M + G PD+ +Y +I
Sbjct: 135 SLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMI 194
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+C+ G ++ E++RKG++PN + +I + E +VL M GV
Sbjct: 195 KVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVN 254
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
Y I CK A L D M + P+ V+Y+ ++HG C EA KL
Sbjct: 255 IGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL 314
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
F M+ G +PD Y LIY CK G+ A S+ + ++K P+ LV+GL K
Sbjct: 315 FKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAK 374
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 3/260 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEV-GVSWNTMSYNIVLHSL 260
F L + I +V S N L C + K A RV+ E P++ G+ + +YN ++
Sbjct: 139 FRDLEKFEISRTVKSLNALLF-ACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVF 197
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
C+ G +++++ +ME G P+ S+G++ISG+ + ++V K++ ++ +G+
Sbjct: 198 CESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGV 257
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
YN I LCK + EA+ +L M G+ P+ V Y+ LI GFC + A KLF
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKI 317
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M + PD Y ++++ LCK G A L E + P +L+ G K +
Sbjct: 318 MVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSK 377
Query: 441 MREAFSIHNQMVQKGLTPNV 460
+ EA + Q+ +K T NV
Sbjct: 378 VEEAKELIGQVKEK-FTRNV 396
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
G+ P+ YN +I + C++G + ++ EM + G+ P++ + +ISGF
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
K+ MK + + +Y + LCK K EA L ML G++P+ VTY+ LI+G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 435 HCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
C + EA + MV +G P+ Y L+ LCK G
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGG 341
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 126/244 (51%), Gaps = 3/244 (1%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP-DVVSYGV 290
+RAI +F E GV +T S+N +L LC+ V A ++ + GN+P D SY +
Sbjct: 203 RRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK--GNIPFDSCSYNI 260
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+ISG+ ++G++E++ K+++E+ G P+ Y+++I+ L + G + ++ + + G
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
PD VY +I F + + + + + M ++ P+ +Y+ ++ GL K K+ +A
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
++F EML G+ P T+ + C G A I+ + + G + Y +L+ L
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 440
Query: 471 CKRG 474
+ G
Sbjct: 441 SRFG 444
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 37/304 (12%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F + S+G+ S +S N L LC A + + + +++ SYNI++
Sbjct: 209 FEESESFGVKCSTESFNALLRCLCE--RSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWS 266
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+LG+V+E +L +M G PD +SY +I G + G++ +++ + ++ KG P+
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
VYN +I + E+ R R M P+ Y+ L+SG K VS A ++F+EM
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM 386
Query: 382 KQKKIVPDFVSYTSMLHGLCKIG----KMV--------------EAHKL----------- 412
+ ++P TS L LC G MV A+KL
Sbjct: 387 LSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKC 446
Query: 413 ------FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
+ EM G D Y ++ G C G + A + + ++KG PN Y+ L
Sbjct: 447 GMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
Query: 467 VDGL 470
L
Sbjct: 507 SSKL 510
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
VL+ M GV PD T + F + V A +LF+E + + S+ ++L LC
Sbjct: 173 VLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLC 232
Query: 402 KIGKMVEAHKLFSEMLVMGLEP-DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
+ + A +F+ G P D +Y +I G K GE+ E + +MV+ G P+
Sbjct: 233 ERSHVSAAKSVFNAK--KGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDC 290
Query: 461 VTYTILVDGLCKRG 474
++Y+ L++GL + G
Sbjct: 291 LSYSHLIEGLGRTG 304
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 2/170 (1%)
Query: 226 GNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
G +G+K A+ +F E GV T L LC G A + + G
Sbjct: 369 GLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRI 428
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
+Y +++ + G+ +L + +E+Q G + VY I+D LC G + A V+
Sbjct: 429 SESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVM 488
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSY 393
E + G P+ VY+ L S S A+KLF ++K+ + + S+
Sbjct: 489 EEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 214 VDSCNLFLTRLCGNFEGKK--RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHN 271
V S +F L G F +K +A +++ E + V ++Y ++ C++ +V+ A
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 272 LLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLC 331
+L +M+ + + + II G + G+L + L +ME P YN+++ C
Sbjct: 307 VLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFC 366
Query: 332 KNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFV 391
K G++ A ++L+ M GV P Y F K L+ ++ + PD +
Sbjct: 367 KAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRL 426
Query: 392 SYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM 451
+Y +L LC+ GK+ A ++ EM G++PD +T T LI+ C+ + EAF +
Sbjct: 427 TYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNA 486
Query: 452 VQKGLTPNVVTYTILVDGLCKRG 474
V++G+ P +T+ ++ +GL +G
Sbjct: 487 VRRGIIPQYITFKMIDNGLRSKG 509
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 132/273 (48%), Gaps = 12/273 (4%)
Query: 211 VVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSY-NIVLHSLCQLGKVK 267
+VS D+ + + R G + RA R Y V S + ++L +LC+ G V+
Sbjct: 170 LVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVR 229
Query: 268 EAHNLLMQMEFCGN------VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
EA M +E G VP V + ++++G+ + +L++ KL EE++ ++P
Sbjct: 230 EAS---MYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVV 286
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y +I+ C+ V A VL EM + + +V+ +I G ++G +S A + +
Sbjct: 287 TYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERF 346
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ P V+Y S++ CK G + A K+ M+ G++P TY K +
Sbjct: 347 FVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKT 406
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
E +++ ++++ G +P+ +TY +++ LC+ G
Sbjct: 407 EEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDG 439
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V E + N M +N ++ L + G++ EA ++ + C + P +V+Y ++
Sbjct: 304 AMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVK 363
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN---------------------------- 325
+C+ G L K+++ + +G+ P YN+
Sbjct: 364 NFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP 423
Query: 326 -------IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
I+ +LC++G++ A +V +EM G+ PD + T LI C+ + A + F
Sbjct: 424 DRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEF 483
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
D ++ I+P ++++ + +GL G A +L S M
Sbjct: 484 DNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 125/252 (49%), Gaps = 14/252 (5%)
Query: 234 AIRVFREYPEVGVSWNTMS----YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
A +FR+Y W S N+++ LCQ+ + A + +M + G PD SY
Sbjct: 135 ACHIFRKYC---YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYR 191
Query: 290 VIISGYCQIGQLEKVLKLMEEL----QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
+++ G+C G+LE+ L+ + +KG + VY ++D LC GEV +A +L +
Sbjct: 192 ILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGK 251
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGN--VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+ + G+ Y + +G +S + + +L E + +P SY++M L +
Sbjct: 252 ILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEE 311
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN-QMVQKGLTPNVVT 462
GK+VE ++ M G EP Y A + C+AG+++EA S+ N +M+Q P V
Sbjct: 312 GKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 463 YTILVDGLCKRG 474
Y +L+ GLC G
Sbjct: 372 YNVLIKGLCDDG 383
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 266 VKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN 325
++ LL + G +P + SY + + + G+L + +++ ++ KG P ++Y
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 326 IIDLLCKNGEVVEAERVL-REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM-KQ 383
+ LC+ G++ EA V+ +EM + P VY LI G C G A +M KQ
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ 398
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
V + +Y +++ GLC+ G+ +EA ++ EML+ P TY +I G C E
Sbjct: 399 VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE 458
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLC 471
A +MV + + P + L + +C
Sbjct: 459 AVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGN-VPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
Y + +LC+ GK+KEA +++ + G+ +P V Y V+I G C G+ + + ++++
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 312 QRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
++ NE Y ++D LC++G+ +EA +V+ EM FP Y +I G C
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
A +EM + +VP+ + ++ +C
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 125/252 (49%), Gaps = 14/252 (5%)
Query: 234 AIRVFREYPEVGVSWNTMS----YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
A +FR+Y W S N+++ LCQ+ + A + +M + G PD SY
Sbjct: 135 ACHIFRKYC---YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYR 191
Query: 290 VIISGYCQIGQLEKVLKLMEEL----QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
+++ G+C G+LE+ L+ + +KG + VY ++D LC GEV +A +L +
Sbjct: 192 ILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGK 251
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGN--VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+ + G+ Y + +G +S + + +L E + +P SY++M L +
Sbjct: 252 ILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEE 311
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN-QMVQKGLTPNVVT 462
GK+VE ++ M G EP Y A + C+AG+++EA S+ N +M+Q P V
Sbjct: 312 GKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 463 YTILVDGLCKRG 474
Y +L+ GLC G
Sbjct: 372 YNVLIKGLCDDG 383
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 266 VKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN 325
++ LL + G +P + SY + + + G+L + +++ ++ KG P ++Y
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 326 IIDLLCKNGEVVEAERVL-REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM-KQ 383
+ LC+ G++ EA V+ +EM + P VY LI G C G A +M KQ
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ 398
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE 443
V + +Y +++ GLC+ G+ +EA ++ EML+ P TY +I G C E
Sbjct: 399 VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE 458
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLC 471
A +MV + + P + L + +C
Sbjct: 459 AVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGN-VPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
Y + +LC+ GK+KEA +++ + G+ +P V Y V+I G C G+ + + ++++
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 312 QRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
++ NE Y ++D LC++G+ +EA +V+ EM FP Y +I G C
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
A +EM + +VP+ + ++ +C
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 134/264 (50%), Gaps = 12/264 (4%)
Query: 210 IVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEA 269
I+ CNL+ +AI F + G+ + ++Y+ +L + GKV+E
Sbjct: 227 IITCAKRCNLY-----------NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEV 275
Query: 270 HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDL 329
+L + G PD +++ V+ + + G + + +++E++ ++PN VYN +++
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEA 335
Query: 330 LCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
+ + G+ A + EM + G+ P+ T L+ + K+ A +L++EMK KK D
Sbjct: 336 MGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMD 395
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEML-VMGLEPDEVTYTALIYGHCKAGEMREAFSIH 448
F+ Y ++L+ IG EA +LF++M + PD +YTA++ + G+ +A +
Sbjct: 396 FILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELF 455
Query: 449 NQMVQKGLTPNVVTYTILVDGLCK 472
+M++ G+ NV+ T LV L K
Sbjct: 456 EEMLKAGVQVNVMGCTCLVQCLGK 479
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%)
Query: 250 TMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLME 309
T+ YN+ + SL + + + ++M G D ++Y II+ + K ++ E
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFE 245
Query: 310 ELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSG 369
+ + GL P+E Y+ I+D+ K+G+V E + G PD + ++ L F ++G
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 370 NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYT 429
+ + EMK + P+ V Y ++L + + GK A LF+EML GL P+E T T
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
AL+ + KA R+A + +M K + + Y L++
Sbjct: 366 ALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN 404
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Query: 311 LQRKGLRPNEYVYNNIIDLLCKNGEVVE-AERVLREMTKHGVFPDNVVYTTLISGFCKSG 369
++ K L P E ++ N+ + G + E + EM K GV DN+ Y+T+I+ +
Sbjct: 176 VKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCN 235
Query: 370 NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYT 429
+ A + F+ M + ++PD V+Y+++L K GK+ E L+ + G +PD + ++
Sbjct: 236 LYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFS 295
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
L +AG+ + +M + PNVV Y L++ + + G
Sbjct: 296 VLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAG 340
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 99/203 (48%), Gaps = 6/203 (2%)
Query: 225 CGNFEGKKRAIR-VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
G+++G IR V +E + V N + YN +L ++ + GK A +L +M G P
Sbjct: 304 AGDYDG----IRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
+ + ++ Y + L+L EE++ K + +YN ++++ G EAER+
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLF 419
Query: 344 REMTKH-GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
+M + PDN YT +++ + G A +LF+EM + + + + T ++ L K
Sbjct: 420 NDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGK 479
Query: 403 IGKMVEAHKLFSEMLVMGLEPDE 425
++ + +F + G++PD+
Sbjct: 480 AKRIDDVVYVFDLSIKRGVKPDD 502
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 4/189 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F+++L G+ + + L ++ G + A++++ E + + YN +L+
Sbjct: 349 FNEMLEAGLTPNEKTLTA-LVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA 407
Query: 262 QLGKVKEAHNLLMQM-EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+G +EA L M E PD SY +++ Y G+ EK ++L EE+ + G++ N
Sbjct: 408 DIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNV 467
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS--GFCKSGNVSAAHKLF 378
++ L K + + V K GV PD+ + L+S C+S +
Sbjct: 468 MGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMAC 527
Query: 379 DEMKQKKIV 387
E KK+V
Sbjct: 528 LERANKKLV 536
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 114/238 (47%), Gaps = 3/238 (1%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+ + VF E P GVS + SY ++++ + G+ + + LL +M+ P +++Y +I
Sbjct: 159 KCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVI 218
Query: 293 SGYCQIGQL--EKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+ C G L E +L L E++ +G++P+ YN ++ G EAE V R M G
Sbjct: 219 NA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGG 277
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ PD Y+ L+ F K + L EM +PD SY +L K G + EA
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
+F +M G P+ TY+ L+ ++G + + +M P+ TY IL++
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 112/236 (47%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F E G+ + ++YN +L + G EA + M G VPD+ +Y ++ +
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
++ +LEKV L+ E+ G P+ YN +++ K+G + EA V +M G P+
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
Y+ L++ F +SG +LF EMK PD +Y ++ + G E LF +M
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ +EPD TY +I+ K G +A I M + P+ YT +++ +
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
VFR + G+ + +Y+ ++ + +L ++++ +LL +M G++PD+ SY V++ Y
Sbjct: 269 VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYA 328
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ G +++ + + ++Q G PN Y+ +++L ++G + ++ EM PD
Sbjct: 329 KSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAA 388
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
Y LI F + G LF +M ++ I PD +Y ++ K G +A K+ M
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ P YT +I +A EA N M + G P++ T+ L+ + G
Sbjct: 449 TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 506
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
SYN++L + + G +KEA + QM+ G P+ +Y V+++ + Q G+ + V +L E+
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
+ P+ YN +I++ + G E + +M + + PD Y +I K G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A K+ M IVP +YT ++ + EA F+ M +G P T+ +L
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+Y + G ++E+ +I +++V G+ N T+ ++ + G
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGG 541
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 110/231 (47%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A+ VF + G + N +Y+++L+ Q G+ + L ++M+ PD +Y ++
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I + + G ++V+ L ++ + + P+ Y II K G +A ++L+ MT + +
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDI 453
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P + YT +I F ++ A F+ M + P ++ S+L+ + G + E+
Sbjct: 454 VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEA 513
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
+ S ++ G+ + T+ A I + + G+ EA + M + P+ T
Sbjct: 514 ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERT 564
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 112/230 (48%), Gaps = 1/230 (0%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAH-NLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
+S + ++YN V+++ + G E L +M G PD+V+Y ++S G ++
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+ + G+ P+ Y+++++ K + + +L EM G PD Y L+
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+ KSG++ A +F +M+ P+ +Y+ +L+ + G+ + +LF EM +PD
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 386
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY LI + G +E ++ + MV++ + P++ TY ++ K G
Sbjct: 387 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 3/233 (1%)
Query: 242 PEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQL 301
P V V SY+ V + +L + ++ ++ N + + ++ + G
Sbjct: 63 PSVSVEKGKYSYD-VESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDW 121
Query: 302 EKVLKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTT 360
++ L+L + +QR+ +PNE++Y +I LL + G + + V EM GV YT
Sbjct: 122 QRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTA 181
Query: 361 LISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA-HKLFSEMLVM 419
LI+ + ++G + +L D MK +KI P ++Y ++++ + G E LF+EM
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 420 GLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
G++PD VTY L+ G EA + M G+ P++ TY+ LV+ K
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+ F EVG + + +++ +L+S + G VKE+ +L ++ G + ++
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQ 533
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I Y Q G+ E+ +K ++++ P+E ++ + V E EM +
Sbjct: 534 IEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDI 593
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA-- 409
P + Y +++ + K+ ++L +EM ++ S +H + IG+M++
Sbjct: 594 LPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRV--------SNIHQV--IGQMIKGDY 643
Query: 410 -------------HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
KL SE +G+ Y AL+ G+ A + N+ ++GL
Sbjct: 644 DDDSNWQIVEYVLDKLNSEGCGLGIR----FYNALLDALWWLGQKERAARVLNEATKRGL 699
Query: 457 TPNVVTYTILV 467
P + LV
Sbjct: 700 FPELFRKNKLV 710
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
++ +Y V+ + Q +EA M G+ P + ++ ++ + + G +++ ++
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
L G+ N +N I+ + G+ EA + +M K PD ++S + +
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML 417
V + F+EMK I+P + Y ML K + + ++L EML
Sbjct: 576 RLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 124/249 (49%), Gaps = 6/249 (2%)
Query: 219 LFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
+++ + GN+E +A +VF GV +T++YN ++ KE + QM+
Sbjct: 254 IYMYKKAGNYE---KARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQR 307
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
PDVVSY ++I Y + + E+ L + EE+ G+RP YN ++D +G V +
Sbjct: 308 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 367
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A+ V + M + +FPD YTT++S + + ++ A K F +K P+ V+Y +++
Sbjct: 368 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
G K + + +++ +M + G++ ++ T ++ + A + +M G+ P
Sbjct: 428 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 487
Query: 459 NVVTYTILV 467
+ +L+
Sbjct: 488 DQKAKNVLL 496
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 119/285 (41%), Gaps = 43/285 (15%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNL---LMQMEFCGN 281
C N E +FR G + ++Y I+L + + K KEA + L+ +
Sbjct: 190 CNNAEA------IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPL 243
Query: 282 VPDVVSYGVIISGYCQIGQLEK--------------------------------VLKLME 309
PD Y ++I Y + G EK V K+ +
Sbjct: 244 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD 303
Query: 310 ELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSG 369
++QR ++P+ Y +I + EA V EM GV P + Y L+ F SG
Sbjct: 304 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Query: 370 NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYT 429
V A +F M++ +I PD SYT+ML M A K F + V G EP+ VTY
Sbjct: 364 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD--GLCK 472
LI G+ KA ++ + ++ +M G+ N T ++D G CK
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK 468
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%), Gaps = 9/245 (3%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
GNF G +R + V ++G + N +SY ++ S + GK A + +M+ G P
Sbjct: 153 GNFNGAERVLSVL---SKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSA 209
Query: 286 VSYGVIISGYCQ---IGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
++Y +I+ + + + E+V + + + ++ L+P++ +Y+ +I + K G +A +V
Sbjct: 210 ITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKV 269
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
M GV V Y +L+S VS K++D+M++ I PD VSY ++ +
Sbjct: 270 FSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGR 326
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
+ EA +F EML G+ P Y L+ +G + +A ++ M + + P++ +
Sbjct: 327 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWS 386
Query: 463 YTILV 467
YT ++
Sbjct: 387 YTTML 391
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 8/232 (3%)
Query: 248 WN--TMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
WN + + +++ + +LG A +L + G+ P+V+SY ++ Y + G+
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV---LREMTKHGVFPDNVVYTTLI 362
+ +Q G P+ Y I+ + + EAE V L + K + PD +Y +I
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
+ K+GN A K+F M K + V+Y S++ E K++ +M ++
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIYDQMQRSDIQ 311
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
PD V+Y LI + +A EA S+ +M+ G+ P Y IL+D G
Sbjct: 312 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 124/249 (49%), Gaps = 6/249 (2%)
Query: 219 LFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEF 278
+++ + GN+E +A +VF GV +T++YN ++ KE + QM+
Sbjct: 261 IYMYKKAGNYE---KARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQR 314
Query: 279 CGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
PDVVSY ++I Y + + E+ L + EE+ G+RP YN ++D +G V +
Sbjct: 315 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 374
Query: 339 AERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
A+ V + M + +FPD YTT++S + + ++ A K F +K P+ V+Y +++
Sbjct: 375 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
G K + + +++ +M + G++ ++ T ++ + A + +M G+ P
Sbjct: 435 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 494
Query: 459 NVVTYTILV 467
+ +L+
Sbjct: 495 DQKAKNVLL 503
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 119/285 (41%), Gaps = 43/285 (15%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNL---LMQMEFCGN 281
C N E +FR G + ++Y I+L + + K KEA + L+ +
Sbjct: 197 CNNAEA------IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPL 250
Query: 282 VPDVVSYGVIISGYCQIGQLEK--------------------------------VLKLME 309
PD Y ++I Y + G EK V K+ +
Sbjct: 251 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD 310
Query: 310 ELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSG 369
++QR ++P+ Y +I + EA V EM GV P + Y L+ F SG
Sbjct: 311 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Query: 370 NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYT 429
V A +F M++ +I PD SYT+ML M A K F + V G EP+ VTY
Sbjct: 371 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 430
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD--GLCK 472
LI G+ KA ++ + ++ +M G+ N T ++D G CK
Sbjct: 431 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK 475
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%), Gaps = 9/245 (3%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
GNF G +R + V ++G + N +SY ++ S + GK A + +M+ G P
Sbjct: 160 GNFNGAERVLSVL---SKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSA 216
Query: 286 VSYGVIISGYCQ---IGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
++Y +I+ + + + E+V + + + ++ L+P++ +Y+ +I + K G +A +V
Sbjct: 217 ITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKV 276
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
M GV V Y +L+S VS K++D+M++ I PD VSY ++ +
Sbjct: 277 FSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGR 333
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
+ EA +F EML G+ P Y L+ +G + +A ++ M + + P++ +
Sbjct: 334 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWS 393
Query: 463 YTILV 467
YT ++
Sbjct: 394 YTTML 398
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 8/232 (3%)
Query: 248 WN--TMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
WN + + +++ + +LG A +L + G+ P+V+SY ++ Y + G+
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV---LREMTKHGVFPDNVVYTTLI 362
+ +Q G P+ Y I+ + + EAE V L + K + PD +Y +I
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
+ K+GN A K+F M K + V+Y S++ E K++ +M ++
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIYDQMQRSDIQ 318
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
PD V+Y LI + +A EA S+ +M+ G+ P Y IL+D G
Sbjct: 319 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 144/300 (48%), Gaps = 33/300 (11%)
Query: 205 LLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLG 264
++ GI VSV+ ++ ++ + E +K A+ +F + ++G S N ++Y ++ LG
Sbjct: 238 MICSGISVSVNVWSMLVSGFFRSGEPQK-AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLG 296
Query: 265 KVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN 324
V EA +L +++ G PD+V ++I Y ++G+ E+ K+ L+++ L P++Y +
Sbjct: 297 MVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFA 356
Query: 325 NIIDLLCKNGEV--------------------------------VEAERVLREMTKHGVF 352
+I+ LC +G+ A +VL M+
Sbjct: 357 SILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFA 416
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
D YT +S C+ G AA K++ + ++K D +++++ L ++GK A L
Sbjct: 417 LDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHL 476
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
F ++ D V+YT I G +A + EA+S+ M + G+ PN TY ++ GLCK
Sbjct: 477 FKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCK 536
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+AI V+ G NT + N+++ +L V A + + F + S+ + +
Sbjct: 126 KAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRF----RNFFSFDIAL 181
Query: 293 SGYCQIG---QLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
S +C G L V +++ + +G PN + I+ L C+ G V EA +V+ M
Sbjct: 182 SHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS 241
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G+ V++ L+SGF +SG A LF++M Q P+ V+YTS++ G +G + EA
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ S++ GL PD V +I+ + + G EA + + ++ L P+ T+ ++
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 470 LCKRG 474
LC G
Sbjct: 362 LCLSG 366
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 3/226 (1%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N + +L C+ G V EA ++ M G V + +++SG+ + G+ +K + L
Sbjct: 211 NRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLF 270
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
++ + G PN Y ++I G V EA VL ++ G+ PD V+ +I + +
Sbjct: 271 NKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRL 330
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G A K+F ++++K+VPD ++ S+L LC GK ++ +G + D VT
Sbjct: 331 GRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG---IGTDFDLVTG 387
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
L K G A + + M K + TYT+ + LC+ G
Sbjct: 388 NLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGG 433
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 97/195 (49%), Gaps = 3/195 (1%)
Query: 249 NTMSYNIVLHSLCQLGKVKE---AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
N S++I L C G + +L +M G P+ +G I+ C+ G + +
Sbjct: 173 NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAF 232
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
+++ + G+ + V++ ++ ++GE +A + +M + G P+ V YT+LI GF
Sbjct: 233 QVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGF 292
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
G V A + +++ + + PD V M+H ++G+ EA K+F+ + L PD+
Sbjct: 293 VDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ 352
Query: 426 VTYTALIYGHCKAGE 440
T+ +++ C +G+
Sbjct: 353 YTFASILSSLCLSGK 367
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%)
Query: 244 VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEK 303
+G ++ ++ N++ + ++G A +L M + D +Y V +S C+ G
Sbjct: 378 IGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRA 437
Query: 304 VLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
+K+ + + ++ + + ++ IID L + G+ A + + D V YT I
Sbjct: 438 AIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIK 497
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
G ++ + A+ L +MK+ I P+ +Y +++ GLCK + + K+ E + G+E
Sbjct: 498 GLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVEL 557
Query: 424 DEVT 427
D T
Sbjct: 558 DPNT 561
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 11/247 (4%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM-EFCGNVPDVVSYGV 290
K+ + F G +N + N + +LC+ V+EA + +++ EF PD ++Y
Sbjct: 163 KKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIK--PDEITYRT 220
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM-TKH 349
+I G+C +G L + KL + +G + I++ L K + EA +V M +K
Sbjct: 221 MIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKR 280
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G D Y +I CK+G + A K+FDEM+++ + D +++ S+++GL ++VEA
Sbjct: 281 GGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEA 340
Query: 410 HKLFSEMLVMGLE-PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
+ LV G+E PD Y LI G K EA + +M+Q+G P + TY +L+
Sbjct: 341 YG-----LVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQ 395
Query: 469 G-LCKRG 474
G L +RG
Sbjct: 396 GHLGRRG 402
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 1/243 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM-EFCGNVPDVVSYGVI 291
R+I+ FR + + S N +L + KEA+ + ++M + G PD+ +Y +
Sbjct: 129 RSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRM 188
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I C+ G ++ E++RK ++P + +ID K + E +V+R M + GV
Sbjct: 189 IRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGV 248
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
Y +I CK + A L D + ++ P+ V+Y+ ++HG C + EA
Sbjct: 249 HVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMN 308
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
LF M+ G +PD Y LI+ CK G+ A + + ++K P+ LV+GL
Sbjct: 309 LFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLA 368
Query: 472 KRG 474
R
Sbjct: 369 SRS 371
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 9/263 (3%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEV-GVSWNTMSYNIVLHSL 260
F L Y I +V S N L C + K A RV+ E P++ G+ + +YN ++ L
Sbjct: 134 FRNLEQYEIPRTVKSLNALLF-ACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVL 192
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
C+ G +++++ +ME P S+G++I G+ + + ++V K+M + G+
Sbjct: 193 CESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGV 252
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
YN +I LCK + EA+ ++ + + P++V Y+ LI GFC N+ A LF+
Sbjct: 253 ATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEV 312
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG---HCK 437
M PD Y +++H LCK G A L E + P L+ G K
Sbjct: 313 MVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSK 372
Query: 438 AGEMREAFSIHNQMVQKGLTPNV 460
E +E ++ V++ T NV
Sbjct: 373 VDEAKELIAV----VKEKFTRNV 391
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 134/262 (51%), Gaps = 8/262 (3%)
Query: 211 VVSVDSCNLFLTRLCGNFEGK-KRAIRVFREYPEV-GVSWNTMSYNIVLHSLCQLGKVKE 268
+V++D+ + + RL + GK +A+ F E + GV +T++ N ++ +L + ++
Sbjct: 200 LVTLDTMSKVMRRLAKS--GKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEH 257
Query: 269 AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIID 328
AH + +++ F PD ++ ++I G+C+ + + +M+ ++ P+ Y + ++
Sbjct: 258 AHEVFLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVE 316
Query: 329 LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
CK G+ +L EM ++G P+ V YT ++ KS V+ A ++++MK+ VP
Sbjct: 317 AYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVP 376
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIH 448
D Y+S++H L K G+ +A ++F +M G+ D + Y +I A +
Sbjct: 377 DAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLL 436
Query: 449 NQMVQ---KGLTPNVVTYTILV 467
+M + +PNV TY L+
Sbjct: 437 KRMEDEEGESCSPNVETYAPLL 458
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 38/261 (14%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
++NI++H C+ K +A ++ M+ PDVV+Y + YC+ G +V +++EE+
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
+ G PN Y ++ L K+ +V EA V +M + G PD Y++LI K+G
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 394
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLC---------KIGKMVEAHK----------- 411
A ++F++M + + D + Y +M+ ++ K +E +
Sbjct: 395 KDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETY 454
Query: 412 ------------------LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
L M+ + D TY LI G C +G++ EA + V+
Sbjct: 455 APLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVR 514
Query: 454 KGLTPNVVTYTILVDGLCKRG 474
KG+ P T +LVD L K+
Sbjct: 515 KGMVPRDSTCKMLVDELEKKN 535
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 299 GQLEKVLKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVV 357
G+ K + E+++ G++ + N+++D L K + A V ++ + PD
Sbjct: 217 GKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF-DTIKPDART 275
Query: 358 YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML 417
+ LI GFCK+ A + D MK + PD V+YTS + CK G +++ EM
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 335
Query: 418 VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G P+ VTYT +++ K+ ++ EA ++ +M + G P+ Y+ L+ L K G
Sbjct: 336 ENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTG 392
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 50/235 (21%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
G+F +R + E E G + N ++Y IV+HSL + +V EA + +M+ G VPD
Sbjct: 322 GDF---RRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDA 378
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDL------------LCKN 333
Y +I + G+ + ++ E++ +G+R + VYN +I L K
Sbjct: 379 KFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKR 438
Query: 334 GEVVEAER--------------------------VLREMTKHGVFPDNVVYTTLISGFCK 367
E E E +L M K+ V D Y LI G C
Sbjct: 439 MEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCM 498
Query: 368 SGNVSAAHKLFDEMKQKKIVP---------DFVSYTSMLHGLCKIGKMVEAHKLF 413
SG V A F+E +K +VP D + +M KI +V++ +
Sbjct: 499 SGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQSKTMI 553
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 132/273 (48%), Gaps = 2/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F + Y + V++ N L L G + K A +F + E + N M+Y ++L+ C
Sbjct: 252 FELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWC 309
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
++ + EA + M G PD+V++ V++ G + + +KL ++ KG PN
Sbjct: 310 RVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVR 369
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y +I CK + A +M G+ PD VYT LI+GF + ++L EM
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
++K PD +Y +++ + A +++++M+ +EP T+ ++ + A
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY 489
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ +M++KG+ P+ +YT+L+ GL G
Sbjct: 490 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEG 522
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
++ ++ G+ + + N+ L L + K AI++F G N SY I++ C
Sbjct: 321 WNDMIDQGLKPDIVAHNVMLEGLLRS-RKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 379
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ ++ A M G PD Y +I+G+ +L+ V +L++E+Q KG P+
Sbjct: 380 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 439
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
YN +I L+ A R+ +M ++ + P + ++ + + N +++EM
Sbjct: 440 TYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEM 499
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
+K I PD SYT ++ GL GK EA + EML G++ + Y + G+
Sbjct: 500 IKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G D +Y ++S + Q E ++ ++EE+ KGL E + + E +A
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKA 248
Query: 340 ERVLREMTKH----GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
+ M K+ GV N + +L G K G A LFD++K+ + P+ ++YT
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSL--GRAKLGK--EAQVLFDKLKE-RFTPNMMTYTV 303
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
+L+G C++ ++EA +++++M+ GL+PD V + ++ G ++ + +A + + M KG
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Query: 456 LTPNVVTYTILVDGLCKR 473
PNV +YTI++ CK+
Sbjct: 364 PCPNVRSYTIMIRDFCKQ 381
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 125/250 (50%), Gaps = 11/250 (4%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CG + + R RE + +++N VL + CQ GK +EA L+ +ME G P
Sbjct: 229 CGELDFATKFFRRMRER-------DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPG 281
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
+V++ ++I GY Q+G+ + + LM++++ G+ + + + +I L NG +A + R
Sbjct: 282 LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFR 341
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
+M GV P+ V + +S ++ ++ + + D + S++ K G
Sbjct: 342 KMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCG 401
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
K+ +A K+F + D T+ ++I G+C+AG +A+ + +M L PN++T+
Sbjct: 402 KLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Query: 465 ILVDGLCKRG 474
++ G K G
Sbjct: 458 TMISGYIKNG 467
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 145/335 (43%), Gaps = 68/335 (20%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
K+ ++GI V + ++ L N + +A+ +FR+ GV N ++ + S C
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNGM-RYQALDMFRKMFLAGVVPNAVTIMSAV-SAC 362
Query: 262 QLGKV----KEAHNLLMQMEF----------------CGNVPD------------VVSYG 289
KV E H++ ++M F CG + D V ++
Sbjct: 363 SCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWN 422
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+I+GYCQ G K +L +Q LRPN +N +I KNG+ EA + + M K
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKD 482
Query: 350 G-VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI--GKM 406
G V + + +I+G+ ++G A +LF +M+ + +P+ V+ S+L + KM
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKM 542
Query: 407 V-EAHKL---------------------------FSEMLVMGLEP-DEVTYTALIYGHCK 437
V E H +S + +G+E D +T+ +LI G+
Sbjct: 543 VREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVL 602
Query: 438 AGEMREAFSIHNQMVQKGLTPNVVTYT--ILVDGL 470
G A ++ NQM +G+TPN T + IL GL
Sbjct: 603 HGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL 637
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ GKV + + + M C V + I++ Y + G+L+ K ++ + +
Sbjct: 198 EAGKVIHSVVIKLGMSSCLRVSNS-----ILAVYAKCGELDFATKFFRRMRERDV----I 248
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+N+++ C+NG+ EA +++EM K G+ P V + LI G+ + G AA L +M
Sbjct: 249 AWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM 308
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ I D ++T+M+ GL G +A +F +M + G+ P+ VT + + +
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI 368
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ +H+ V+ G +V+ LVD K G
Sbjct: 369 NQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCG 401
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 11/238 (4%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CG ++ RE N +++ ++ + + + +E L M G +PD
Sbjct: 128 CGCIADARKVFDSMRER-------NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
+ I+ G G +E + + + G+ V N+I+ + K GE+ A + R
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 240
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
M + D + + +++ +C++G A +L EM+++ I P V++ ++ G ++G
Sbjct: 241 RMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
K A L +M G+ D T+TA+I G G +A + +M G+ PN VT
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 18/233 (7%)
Query: 234 AIRVFREYPEVG-VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A+ +F+ + G V NT ++N+++ Q GK EA L +M+F +P+ V+ ++
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+ + V ++ + R+ L V N + D K+G++ + + M
Sbjct: 532 PACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET---- 587
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML--HGLCKIGKMVEAH 410
D + + +LI G+ G+ A LF++MK + I P+ + +S++ HGL +G + E
Sbjct: 588 KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL--MGNVDEGK 645
Query: 411 KLFSEM-----LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
K+F + ++ LE +A++Y + +A + EA +M + TP
Sbjct: 646 KVFYSIANDYHIIPALEH----CSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF--P 353
C+ G L + K ++ L ++G + Y +++ C + + R+L + G+F P
Sbjct: 57 CRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLES-CIDSGSIHLGRILH--ARFGLFTEP 113
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D V T L+S + K G ++ A K+FD M+++ + ++++M+ + + E KLF
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLF 169
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
M+ G+ PD+ + ++ G G++ IH+ +++ G++
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMS 213
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 121/236 (51%), Gaps = 3/236 (1%)
Query: 232 KRAIRVFREYPEV---GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
+R +RV+ Y ++ G YN ++ +L + G A + + G V + ++
Sbjct: 207 RRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTF 266
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+++ G C+ G++E++L++++ ++ +P+ + Y +I L G + + RV EM +
Sbjct: 267 MILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRR 326
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
+ PD + Y TL+ G CK G V ++LF EMK K+I+ D Y ++ G GK+
Sbjct: 327 DEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRS 386
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
A L+ +++ G D Y A+I G C ++ +A+ + +++ L P+ T +
Sbjct: 387 ACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLS 442
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 106/202 (52%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ V+ ++ E G+ + ++ I++ LC+ G+++E +L +M PDV +Y +I
Sbjct: 247 ALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIK 306
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G L+ L++ +E++R ++P+ Y ++ LCK+G V + EM +
Sbjct: 307 TLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D +Y LI GF G V +A L++++ + D Y +++ GLC + ++ +A+KLF
Sbjct: 367 DREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLF 426
Query: 414 SEMLVMGLEPDEVTYTALIYGH 435
+ LEPD T + ++ +
Sbjct: 427 QVAIEEELEPDFETLSPIMVAY 448
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%)
Query: 275 QMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNG 334
+M+ G P V Y I+ + G + L + E+ + GL + ++ LCK G
Sbjct: 218 KMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAG 277
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
+ E +L+ M ++ PD YT +I GN+ A+ +++DEM++ +I PD ++Y
Sbjct: 278 RIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYG 337
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK 454
+++ GLCK G++ ++LF EM + D Y LI G G++R A ++ +V
Sbjct: 338 TLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDS 397
Query: 455 GLTPNVVTYTILVDGLC 471
G ++ Y ++ GLC
Sbjct: 398 GYIADIGIYNAVIKGLC 414
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEA---HNLLMQMEFCGNVPDVVSY 288
++++ +F E ++G ++ SY+I + + G VK A H +++M C VP + +Y
Sbjct: 524 QKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMS-C--VPSIAAY 580
Query: 289 GVIISGYCQIGQLEKVLKLMEE-LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
+ G CQIG+++ V+ L+ E L P E+ Y + +CK + +V+ EM
Sbjct: 581 LSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMN 640
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV--PDFVSYTSML 397
+ GVF + V+Y +ISG K G + A ++F E+K++K++ D V Y ML
Sbjct: 641 QEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEML 692
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 38/283 (13%)
Query: 229 EGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
+GK R A ++ + + G + YN V+ LC + +V +A+ L PD +
Sbjct: 381 DGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFET 440
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY-------------------------- 321
I+ Y + +L ++E + G ++Y
Sbjct: 441 LSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILK 500
Query: 322 --------VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
VYN +++ L K G++ ++ + EM K G PD+ Y+ I F + G+V A
Sbjct: 501 TKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKA 560
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE--PDEVTYTAL 431
A +++ + VP +Y S+ GLC+IG+ ++A L + +E P E Y
Sbjct: 561 ACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGE-IDAVMLLVRECLGNVESGPMEFKYALT 619
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ CK + + ++M Q+G+ N V Y ++ G+ K G
Sbjct: 620 VCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHG 662
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%)
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
++KG + + YN L +NG A+++ M G P + LI +
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
+ ++++MK+ P Y ++ L K G A ++ + GL + T+ L
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ G CKAG + E I +M + P+V YT ++ L G
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEG 312
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 138/333 (41%), Gaps = 19/333 (5%)
Query: 161 FDQFTERLIYTYKDWGAHPLVFD----------VFFQXXXXXXXXXXXXXXFHKLLSYGI 210
+++ +L Y+ AH LVFD V F HK+
Sbjct: 165 YNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMR 224
Query: 211 VVSVDSCNLFLTRLCGNF------EGKKRAIRVFREY--PEVGVSWNTMSYNIVLHSLCQ 262
V + +L L+ L G F E ++ ++ EY E S ++ ++ S+C+
Sbjct: 225 VCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCR 284
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
G + + M C +V +YG +I C+ + +++ ++ KGL+P
Sbjct: 285 EGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTS 344
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
YN II LCK+G + A ++L E ++ FP Y L+ CK + A + + M
Sbjct: 345 YNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELML 404
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
+K+ Y L GLC + E + ML PDE T +I G CK G +
Sbjct: 405 RKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVD 464
Query: 443 EAFSI-HNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A + + M K P+ VT ++ GL +G
Sbjct: 465 DAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQG 497
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 116/226 (51%), Gaps = 5/226 (2%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
+YN +++ LC + +V +AH L+ M G++PDVV++ +I GYC+I +LE K+ +E+
Sbjct: 164 NYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEM 223
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH-----GVFPDNVVYTTLISGFC 366
+ G+RPN + +I K +V ++++E+ ++ + L+ C
Sbjct: 224 RVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMC 283
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
+ G + ++ + M + V +Y M+ LC+ + A ++ M GL+P
Sbjct: 284 REGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRT 343
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+Y A+I+G CK G A+ + + + P+ TY +L++ LCK
Sbjct: 344 SYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCK 389
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 6/219 (2%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQM---EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ N V++ LC++G+V +A +L M +FC PD V+ ++ G G+ E+ L ++
Sbjct: 449 TLNTVINGLCKMGRVDDAMKVLDDMMTGKFCA--PDAVTLNTVMCGLLAQGRAEEALDVL 506
Query: 309 EE-LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCK 367
+ ++P YN +I L K + EA V ++ K V D+ Y +I G C
Sbjct: 507 NRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCV 566
Query: 368 SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
+ V A K +D++ D Y + L GLC+ G + +A ++ G P+ V
Sbjct: 567 TNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVC 626
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
Y +I ++G REA+ I +M + G P+ VT+ IL
Sbjct: 627 YNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 52/298 (17%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
+C A+R+ G ++++ + V+HSLC G+ EAH + G +P
Sbjct: 64 ICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIP 123
Query: 284 DVVSYGVII-------SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
D + VII S +G + +++ +E P+ YN +++ LC V
Sbjct: 124 DERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFV-----PSLTNYNRLMNQLCTIYRV 178
Query: 337 VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
++A +++ +M G PD V +TTLI G+C+ + AHK+FDEM+ I P+ ++ + +
Sbjct: 179 IDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVL 238
Query: 397 LHGLCKIGKMVEAHKLFSEML-VMGLEPD----EVTYTALIYGHCKAGEMREAFSIHNQM 451
+ G K+ + KL E+ M E D + L+ C+ G + F I M
Sbjct: 239 IGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM 298
Query: 452 V-----------------------------------QKGLTPNVVTYTILVDGLCKRG 474
KGL P +Y ++ GLCK G
Sbjct: 299 SLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDG 356
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 250 TMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLME 309
T YNI L LC + E N+L+ M PD + +I+G C++G+++ +K+++
Sbjct: 412 TRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLD 471
Query: 310 ELQR-KGLRPNEYVYNNIIDLLCKNGEVVEAERVL-REMTKHGVFPDNVVYTTLISGFCK 367
++ K P+ N ++ L G EA VL R M ++ + P V Y +I G K
Sbjct: 472 DMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Query: 368 SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
A +F ++++ + D +Y ++ GLC K+ A K + +++ D
Sbjct: 532 LHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFV 591
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
Y A + G C++G + +A + G PNVV Y ++ + G
Sbjct: 592 YAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSG 638
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQI 298
R PE + ++YN V+ L +L K EA ++ Q+E D +Y +II G C
Sbjct: 508 RVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVT 567
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
+++ K +++ R + +VY + LC++G + +A L ++ G P+ V Y
Sbjct: 568 NKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCY 627
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSY 393
T+I+ +SG A+++ +EM++ PD V++
Sbjct: 628 NTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW 662
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ VF + + V+ ++ +Y I++ LC KV A + + D Y +
Sbjct: 538 AMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLK 597
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G CQ G L + +L G PN YN +I ++G EA ++L EM K+G P
Sbjct: 598 GLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAP 657
Query: 354 DNVVYTTL 361
D V + L
Sbjct: 658 DAVTWRIL 665
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV-PD 284
G FE A +VF E PE +S+N +L++ K + ++ ++ PD
Sbjct: 120 GMFEN---AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPD 176
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
V SY +I G C G + + L++E++ KGL+P+ +N ++ G+ E E++
Sbjct: 177 VASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWA 236
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
M + V D Y + G LFD++K ++ PD ++T+M+ G G
Sbjct: 237 RMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEG 296
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
K+ EA + E+ G P + + +L+ CKAG++ A+ + ++ K L +
Sbjct: 297 KLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQ 356
Query: 465 ILVDGLCK 472
+VD L K
Sbjct: 357 EVVDALVK 364
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 1/191 (0%)
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
+S+ +++ + + V + +EL K + P+ YN +I LC G EA ++
Sbjct: 141 ALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALI 200
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
E+ G+ PD++ + L+ G +++ M +K + D SY + L GL
Sbjct: 201 DEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAME 260
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
K E LF ++ L+PD T+TA+I G G++ EA + + ++ + G P +
Sbjct: 261 NKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVF 320
Query: 464 TILVDGLCKRG 474
L+ +CK G
Sbjct: 321 NSLLPAICKAG 331
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 1/212 (0%)
Query: 237 VFREYP-EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
+F+E P ++ + + SYN ++ LC G EA L+ ++E G PD +++ +++
Sbjct: 163 IFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHES 222
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
G+ E+ ++ + K ++ + YN + L + E + ++ + + PD
Sbjct: 223 YTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDV 282
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
+T +I GF G + A + E+++ P + S+L +CK G + A++L E
Sbjct: 283 FTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKE 342
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
+ L DE ++ K + EA I
Sbjct: 343 IFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
K + Q + R N VY + L + E +L E K+ +I+ +
Sbjct: 57 KFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLY 116
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML-VMGLEPD 424
+ G A K+FDEM ++ +S+ ++L+ K +F E+ + +EPD
Sbjct: 117 GRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPD 176
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+Y LI G C G EA ++ +++ KGL P+ +T+ IL+
Sbjct: 177 VASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILL 219
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
E V + SYN L L K +E +L +++ PDV ++ +I G+ G+L+
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
+ + +E+++ G RP ++V+N+++ +CK G++ A + +E+ + D V ++
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
Query: 363 SGFCKSGNVSAAHKLFD 379
K A ++ +
Sbjct: 360 DALVKGSKQDEAEEIVE 376
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 179/418 (42%), Gaps = 36/418 (8%)
Query: 58 DADLVRHVSTTIKRRRSEPLRRVLKPFESKLNPHHLIWVLINIKNDYVLVLDFFNWARSR 117
DA+ + + T + E L L KL+P + VL + N VL L F WA ++
Sbjct: 65 DAERICKILTKFTDSKVETL---LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQ 121
Query: 118 RDKPSLEALCIVLHIAVASNDLKMAQTLVFEF---WATPRLDVHHLFDQFTERLIYTYKD 174
+ H N L + + +F W+ L D + + + +
Sbjct: 122 KG---------FKHTTSNYNALIESLGKIKQFKLIWS--------LVDDMKAKKLLSKE- 163
Query: 175 WGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRA 234
F + + FHK+ +G + N L L + A
Sbjct: 164 ------TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKS-RNVGDA 216
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
+VF + + + SY I+L Q + + +M+ G PDVV+YG+II+
Sbjct: 217 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 276
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP- 353
+C+ + E+ ++ E++++ +P+ +++ ++I+ L ++ +A E +K FP
Sbjct: 277 HCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF-ERSKSSGFPL 335
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ Y L+ +C S + A+K DEM+ K + P+ +Y +LH L ++ + EA++++
Sbjct: 336 EAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY 395
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
M EP TY ++ C + A I ++M KG+ P + ++ L+ LC
Sbjct: 396 Q---TMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALC 450
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 115/242 (47%), Gaps = 3/242 (1%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K AI F + E G + +N +L +L + V +A + +M+ PD+ SY ++
Sbjct: 179 KEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTIL 238
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G+ Q L +V ++ E++ +G P+ Y II+ CK + EA R EM +
Sbjct: 239 LEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNC 298
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P ++ +LI+G ++ A + F+ K + +Y +++ C +M +A+K
Sbjct: 299 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 358
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
EM + G+ P+ TY +++ + +EA+ ++ M P V TY I+V C
Sbjct: 359 TVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFC 415
Query: 472 KR 473
+
Sbjct: 416 NK 417
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME----------FCGNV 282
R V RE + G + ++Y I++++ C+ K +EA +ME FC +
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLI 309
Query: 283 PDVVS-------------------------YGVIISGYCQIGQLEKVLKLMEELQRKGLR 317
+ S Y ++ YC ++E K ++E++ KG+
Sbjct: 310 NGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
PN Y+ I+ L + EA V + M+ P Y ++ FC + A K+
Sbjct: 370 PNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKI 426
Query: 378 FDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
+DEMK K ++P ++S++ LC K+ EA + F+EML +G+ P
Sbjct: 427 WDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F + S G + + N + C + + + A + E GV N +Y+I+LH L
Sbjct: 325 FERSKSSGFPLEAPTYNALVGAYCWS-QRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI 383
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
++ + KEA+ + M C P V +Y +++ +C +L+ +K+ +E++ KG+ P +
Sbjct: 384 RMQRSKEAYEVYQTMS-CE--PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 440
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSG 369
+++++I LC ++ EA EM G+ P +++ L G
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEG 488
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 74/172 (43%), Gaps = 3/172 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ F G +YN ++ + C ++++A+ + +M G P+ +Y +I+
Sbjct: 321 ALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILH 380
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ ++++ + E Q P Y ++ + C + A ++ EM GV P
Sbjct: 381 ---HLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLP 437
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
++++LI+ C + A + F+EM I P ++ + L G+
Sbjct: 438 GMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGR 489
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+KG + YN +I+ L K + ++ +M + + + + ++ V
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKET-FALISRRYARARKVK 179
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A F +M++ + + ML L K + +A K+F +M EPD +YT L+
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
G + + ++ +M +G P+VV Y I+++ CK
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCK 279
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 132/273 (48%), Gaps = 2/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F + Y + V++ N L L G + K A +F + E + N M+Y ++L+ C
Sbjct: 251 FELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWC 308
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
++ + EA + M G PD+V++ V++ G + + +KL ++ KG PN
Sbjct: 309 RVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 368
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y +I CK + A +M G+ PD VYT LI+GF + ++L EM
Sbjct: 369 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 428
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
++K PD +Y +++ + +++++M+ +EP T+ ++ + A
Sbjct: 429 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 488
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ ++M++KG+ P+ +YT+L+ GL G
Sbjct: 489 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 521
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 120/239 (50%), Gaps = 5/239 (2%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME--FCGNVPDVVSY 288
+K+A+ +F + + N +L SL + KEA L +++ F P++++Y
Sbjct: 244 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF---TPNMMTY 300
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
V+++G+C++ L + ++ ++ GL+P+ +N +++ L ++ + +A ++ M
Sbjct: 301 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 360
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
G P+ YT +I FCK ++ A + FD+M + PD YT ++ G K+
Sbjct: 361 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 420
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
++L EM G PD TY ALI I+N+M+Q + P++ T+ +++
Sbjct: 421 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 479
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 8/281 (2%)
Query: 160 LFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNL 219
LFD+ ER + + + V ++ ++ +G+ + + N+
Sbjct: 285 LFDKLKERFT-------PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNV 337
Query: 220 FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
L L + + K AI++F G N SY I++ C+ ++ A M
Sbjct: 338 MLEGLLRSMK-KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 396
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G PD Y +I+G+ +L+ V +L++E+Q KG P+ YN +I L+
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
R+ +M ++ + P + ++ + + N ++DEM +K I PD SYT ++ G
Sbjct: 457 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
L GK EA + EML G++ + Y + G+
Sbjct: 517 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 118/242 (48%), Gaps = 3/242 (1%)
Query: 230 GKKRAIRVFREYPE-VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
+K A R F E G + ++ +YN ++ L + + + ++L +M G + + ++
Sbjct: 173 ARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETF 231
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+ + + + +K + + E +++ + N ++D L + EA+ VL + K
Sbjct: 232 TIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLK 290
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
P+ + YT L++G+C+ N+ A +++++M + PD V++ ML GL + K +
Sbjct: 291 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 350
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
A KLF M G P+ +YT +I CK M A + MV GL P+ YT L+
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 469 GL 470
G
Sbjct: 411 GF 412
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G D +Y ++S + Q E ++ ++EE+ KGL E + + E +A
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKA 247
Query: 340 ERVLREMTKH----GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
+ M K+ GV N + +L G K G A LFD++K++ P+ ++YT
Sbjct: 248 VGIFELMKKYKFKIGVETINCLLDSL--GRAKLGK--EAQVLFDKLKER-FTPNMMTYTV 302
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
+L+G C++ ++EA +++++M+ GL+PD V + ++ G ++ + +A + + M KG
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 456 LTPNVVTYTILVDGLCKR 473
PNV +YTI++ CK+
Sbjct: 363 PCPNVRSYTIMIRDFCKQ 380
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 132/273 (48%), Gaps = 2/273 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F + Y + V++ N L L G + K A +F + E + N M+Y ++L+ C
Sbjct: 252 FELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWC 309
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
++ + EA + M G PD+V++ V++ G + + +KL ++ KG PN
Sbjct: 310 RVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 369
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y +I CK + A +M G+ PD VYT LI+GF + ++L EM
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
++K PD +Y +++ + +++++M+ +EP T+ ++ + A
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 489
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ ++M++KG+ P+ +YT+L+ GL G
Sbjct: 490 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 522
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 120/239 (50%), Gaps = 5/239 (2%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME--FCGNVPDVVSY 288
+K+A+ +F + + N +L SL + KEA L +++ F P++++Y
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF---TPNMMTY 301
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
V+++G+C++ L + ++ ++ GL+P+ +N +++ L ++ + +A ++ M
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 361
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
G P+ YT +I FCK ++ A + FD+M + PD YT ++ G K+
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
++L EM G PD TY ALI I+N+M+Q + P++ T+ +++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 8/281 (2%)
Query: 160 LFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNL 219
LFD+ ER + + + V ++ ++ +G+ + + N+
Sbjct: 286 LFDKLKERFT-------PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNV 338
Query: 220 FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
L L + + K AI++F G N SY I++ C+ ++ A M
Sbjct: 339 MLEGLLRSMK-KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G PD Y +I+G+ +L+ V +L++E+Q KG P+ YN +I L+
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
R+ +M ++ + P + ++ + + N ++DEM +K I PD SYT ++ G
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
L GK EA + EML G++ + Y + G+
Sbjct: 518 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 117/242 (48%), Gaps = 3/242 (1%)
Query: 230 GKKRAIRVFREYPE-VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
+K A R F E G + + +YN ++ L + + + ++L +M G + + ++
Sbjct: 174 ARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETF 232
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+ + + + +K + + E +++ + N ++D L + EA+ VL + K
Sbjct: 233 TIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLK 291
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
P+ + YT L++G+C+ N+ A +++++M + PD V++ ML GL + K +
Sbjct: 292 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 351
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
A KLF M G P+ +YT +I CK M A + MV GL P+ YT L+
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 469 GL 470
G
Sbjct: 412 GF 413
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 102/191 (53%), Gaps = 10/191 (5%)
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+Y ++S + Q E ++ ++EE+ KGL E + + E +A + M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 347 TKH----GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
K+ GV N + +L G K G A LFD++K++ P+ ++YT +L+G C+
Sbjct: 256 KKYKFKIGVETINCLLDSL--GRAKLGK--EAQVLFDKLKER-FTPNMMTYTVLLNGWCR 310
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
+ ++EA +++++M+ GL+PD V + ++ G ++ + +A + + M KG PNV +
Sbjct: 311 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 463 YTILVDGLCKR 473
YTI++ CK+
Sbjct: 371 YTIMIRDFCKQ 381
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 132/278 (47%), Gaps = 28/278 (10%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
+ G E + + E V V N ++N+++ + C+ KV+EA ++ +ME CG P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEE--LQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
D V+Y I + Y Q G+ + + E + ++ +PN ++ C+ G V + R
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCK-------------------------SGNVSAAHK 376
+R M + V + VV+ +LI+GF + GN +
Sbjct: 282 FVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQ 341
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+ MK+ + D ++Y+++++ G M +A ++F EM+ G++PD Y+ L G+
Sbjct: 342 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 401
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+A E ++A + ++ + PNVV +T ++ G C G
Sbjct: 402 RAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNG 438
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 132/274 (48%), Gaps = 33/274 (12%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV--- 282
GN E A++ + E+G++ T +YN ++ GK + + LL M GNV
Sbjct: 129 GNMED---AVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVG 185
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV--EAE 340
P++ ++ V++ +C+ ++E+ +++++++ G+RP+ YN I + GE V E+E
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGL 400
V + + K P+ ++ G+C+ G V + MK+ ++ + V + S+++G
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 401 CKIG---------------------KMVEAHKLFSEMLVM----GLEPDEVTYTALIYGH 435
++ ++V K+ ++L + ++ D +TY+ ++
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
AG M +A + +MV+ G+ P+ Y+IL G
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 399
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A VF+ E G + +SY +L ++ + +++ ++E G D + + +I+
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG--- 350
+ + G +E ++ + +++ GL P YN +I G+ + +L M + G
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD 183
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
V P+ + L+ +CK V A ++ +M++ + PD V+Y ++ + G+ V A
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 411 KLFSEMLVM--GLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
E +VM +P+ T ++ G+C+ G +R+ +M + + N+V + L++
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 469 GL 470
G
Sbjct: 304 GF 305
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 109/209 (52%), Gaps = 4/209 (1%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
EV ++ MS+N + +G K +L M+ C DV++Y +++ + G +E
Sbjct: 316 EVTLTLLLMSFN---EEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYME 372
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI 362
K ++ +E+ + G++P+ + Y+ + + E +AE +L + P+ V++TT+I
Sbjct: 373 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVI 431
Query: 363 SGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
SG+C +G++ A ++F++M + + P+ ++ +++ G ++ + +A ++ M G++
Sbjct: 432 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 491
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQM 451
P+ T+ L AG E+ N +
Sbjct: 492 PENSTFLLLAEAWRVAGLTDESNKAINAL 520
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 123/261 (47%), Gaps = 26/261 (9%)
Query: 216 SCNLFLTRLCGNFEGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQL---GKVKEAHN 271
+C + + C EG+ R +R R E+ V N + +N +++ ++ + E
Sbjct: 262 TCGIVVGGYC--REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTL 319
Query: 272 LLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLC 331
L+ M F V V + + + +VL LM+E ++ + Y+ +++
Sbjct: 320 TLLLMSFNEEVELVGNQKMKV----------QVLTLMKECN---VKADVITYSTVMNAWS 366
Query: 332 KNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV---P 388
G + +A +V +EM K GV PD Y+ L G+ ++ A +L + + IV P
Sbjct: 367 SAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL----IVESRP 422
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIH 448
+ V +T+++ G C G M +A ++F++M G+ P+ T+ L++G+ + + +A +
Sbjct: 423 NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 482
Query: 449 NQMVQKGLTPNVVTYTILVDG 469
M G+ P T+ +L +
Sbjct: 483 QMMRGCGVKPENSTFLLLAEA 503
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
++++L + G EA+ V + + + G P + YTTL++ + + E++Q
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 386 IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAF 445
D + + ++++ + G M +A + +M +GL P TY LI G+ AG+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 446 SIHNQMVQKG---LTPNVVTYTILVDGLCKR 473
+ + M+++G + PN+ T+ +LV CK+
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 311 LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
L G RP+ Y ++ + + ++ E+ + G D++ + +I+ F +SGN
Sbjct: 71 LAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGN 130
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMG---LEPDEVT 427
+ A + +MK+ + P +Y +++ G GK + +L ML G + P+ T
Sbjct: 131 MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRT 190
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ L+ CK ++ EA+ + +M + G+ P+ VTY + ++G
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 129/291 (44%), Gaps = 44/291 (15%)
Query: 221 LTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCG 280
L L G K A VF + E G + N +Y + L +LC+ + A ++ +M G
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 281 NVPDVVSYGVIISGYCQIGQLEKVLKLME------------------------------- 309
+ + G II+ +C+ G+ E+ + E
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA 356
Query: 310 ---------ELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTT 360
E +R+G++P ++++I LC+ V +A+ +L +M G P N V+
Sbjct: 357 QEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 361 LISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMG 420
++ K+G++ A ++ M+ + + PD +YT ++ G K G M EA ++ +E
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 472
Query: 421 LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+ VTY ALI G+CK E EA + N+M + G+ PN Y L+ C
Sbjct: 473 KKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+LGK K A ++ + E G P+ +Y + + C+ ++ + E++ + G+
Sbjct: 243 KLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGE 302
Query: 322 VYNNIIDLLCKNGEVVEAERVLR-EMTKHGVFPDNVVYTTLISGFCKS-GNVSAAHKLFD 379
NII CK G+ EA V TK P V TLI+ CK+ G ++ A ++
Sbjct: 303 QMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFV-ATLITALCKNDGTITFAQEMLG 361
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
++ + ++ ++H LC++ + +A L +M+ G P + +++ K G
Sbjct: 362 DLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTG 421
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ EA + M +GL P+V TYT+++ G K G
Sbjct: 422 DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGG 456
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A V + G+ + +Y +++ + G + EA +L + + V+Y +I
Sbjct: 425 EAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLC-KNGEVVEAERVLREMTKHGV 351
GYC+I + ++ LKL+ E+ R G++PN YN +I C K + +AE + EM + G+
Sbjct: 485 RGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 16/255 (6%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGK----VKEAHNLLMQMEFCG 280
G FE A +VF E P + +S+N +L S +L K V+E N E G
Sbjct: 122 AGMFEN---AQKVFEEMPNRDCKRSVLSFNALL-SAYRLSKKFDVVEELFN-----ELPG 172
Query: 281 NV---PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
+ PD+VSY +I C+ L + + L++E++ KGL+P+ +N ++ G+
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
E + +M + V D Y + G LF E+K + PD S+ +M+
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
G GKM EA + E++ G PD+ T+ L+ CKAG+ A + + K
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 458 PNVVTYTILVDGLCK 472
T LVD L K
Sbjct: 353 VGQTTLQQLVDELVK 367
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
V+S+ ++S Y + + V +L EL K ++P+ YN +I LC+ + EA +L
Sbjct: 144 VLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALL 203
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
E+ G+ PD V + TL+ G +++ +M +K + D +Y + L GL
Sbjct: 204 DEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANE 263
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
K E LF E+ GL+PD ++ A+I G G+M EA + + ++V+ G P+ T+
Sbjct: 264 AKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATF 323
Query: 464 TILVDGLCKRG 474
+L+ +CK G
Sbjct: 324 ALLLPAMCKAG 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 38/213 (17%)
Query: 237 VFREYP-EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG-VIISG 294
+F E P ++ + + +SYN ++ +LC+ + EA LL ++E G PD+V++ +++S
Sbjct: 166 LFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSS 225
Query: 295 YCQIGQLE-----------------------------------KVLKLMEELQRKGLRPN 319
Y + GQ E +++ L EL+ GL+P+
Sbjct: 226 YLK-GQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
+ +N +I G++ EAE +E+ KHG PD + L+ CK+G+ +A +LF
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
E K+ + + ++ L K K EA ++
Sbjct: 345 ETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
E++E ++ R+M+K G +IS + K+G A K+F+EM + +S+
Sbjct: 95 EILEEQKKYRDMSKEGF------AARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFN 148
Query: 395 SMLHGLCKIGKMVEAHKLFSEML-VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
++L K +LF+E+ + ++PD V+Y LI C+ + EA ++ +++
Sbjct: 149 ALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIEN 208
Query: 454 KGLTPNVVTYTILV 467
KGL P++VT+ L+
Sbjct: 209 KGLKPDIVTFNTLL 222
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
+NI+L + C ++KEA ++ ++ N PDV + +++ G+ + G + E+
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSRFN-PDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
++G +PN Y ID CK EA R+ +M + + TTLI G + N
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A +LFDE+ ++ + PD +Y +++ L K G + A K+ EM G+EPD VT+ ++
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 433 YGHCKAGE--MREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G K+ E + +M ++ L P T +L+ C G
Sbjct: 358 IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNG 401
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 14/230 (6%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQ-------LEKVL 305
+ LH L ++ +A L+ ++ + P+++S+ + C+I + LE +
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEVR--KDYPNLLSFKSMSILLCKIAKFGSYEETLEAFV 163
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF-PDNVVYTTLISG 364
K+ +E+ RK +E+ N ++ C E+ EA + ++ H F PD L+ G
Sbjct: 164 KMEKEIFRKKFGVDEF--NILLRAFCTEREMKEARSIFEKL--HSRFNPDVKTMNILLLG 219
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
F ++G+V+A + EM ++ P+ V+Y + G CK EA +LF +M + +
Sbjct: 220 FKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDIT 279
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
T LI+G A +A + +++ ++GLTP+ Y L+ L K G
Sbjct: 280 VQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCG 329
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 117/295 (39%), Gaps = 39/295 (13%)
Query: 213 SVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNL 272
VD N+ L C E K+ R E + + + NI+L + G V
Sbjct: 175 GVDEFNILLRAFCTEREMKE--ARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELF 232
Query: 273 LMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR------------------- 313
+M G P+ V+YG+ I G+C+ + L+L E++ R
Sbjct: 233 YHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGV 292
Query: 314 ----------------KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVV 357
+GL P+ YN ++ L K G+V A +V++EM + G+ PD+V
Sbjct: 293 ARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVT 352
Query: 358 YTTLISGFCKSG--NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
+ ++ G KS + + + +MK++ +VP + ++ C G++ L+
Sbjct: 353 FHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKY 412
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
ML G P L C +AF Q V++G + Y +L L
Sbjct: 413 MLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSL 467
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 12/244 (4%)
Query: 239 REYPEVGVSWNTMSYNIVLHSLCQLGKVK-----EAHNLLMQMEFCGNVPDVVSYGVIIS 293
+E EV VS N +L +L +G V A L+ M G +P + + +
Sbjct: 313 KEVAEVIVSGKFPMDNDILDAL--IGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSK 370
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
C+ + + ++K E L KG Y+ +I LCK G V E+ L+EM K G+ P
Sbjct: 371 NLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAP 430
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D +Y LI CK+ + A KL+DEM + + +Y ++ L + G+ E+ +LF
Sbjct: 431 DVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLF 490
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ---KGLTPNVVTYTILVDGL 470
+ML G+EPDE Y +LI G CK ++ A + + ++ K +T V++ +L L
Sbjct: 491 DKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVL--NL 548
Query: 471 CKRG 474
C G
Sbjct: 549 CSNG 552
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 9/238 (3%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
I+ + G SY++++ LC+ G+V+E++ L +M+ G PDV Y +I
Sbjct: 382 IKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEA 441
Query: 295 YCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
C+ + KL +E+ +G + N YN +I L + GE E+ R+ +M + G+ PD
Sbjct: 442 CCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPD 501
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQK--KIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
+Y +LI G CK + AA ++F + ++ K V V + + LC G EA +L
Sbjct: 502 ETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRV-LSEFVLNLCSNGHSGEASQL 560
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
E E E T ++ C A I + K ++P++V +TI D L
Sbjct: 561 LRER-----EHLEHTGAHVVLLKCVADAKEVEIGIRHMQWIKEVSPSLV-HTISSDLL 612
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 38/309 (12%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWN-TMSYNIVLHSL 260
F K+ G+ ++ +++ C + E + +R+ E + ++ N ++ ++LHSL
Sbjct: 175 FVKMRHKGVSLNTLGFGVYIGWFCRSSE-TNQLLRLVDEVKKANLNINGSIIALLILHSL 233
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
C+ + +A +L ++ PD ++Y VI + G L + ++++ ++ G+ P
Sbjct: 234 CKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRS 293
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP-DNVVYTTLISG--------------- 364
Y I L + EA+ V E+ G FP DN + LI
Sbjct: 294 SDYRAFILDLISAKRLTEAKEV-AEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVY 352
Query: 365 -------------------FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
C+ K ++ + K + SY+ M+ LCK G+
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ E++ EM GL PD Y ALI CKA +R A + ++M +G N+ TY +
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 466 LVDGLCKRG 474
L+ L + G
Sbjct: 473 LIRKLSEEG 481
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 2/220 (0%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N +L L G A L ++M G + + +GV I +C+ + ++L+L++E+++
Sbjct: 156 NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKK 215
Query: 314 KGLRPNEYVYN-NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
L N + I+ LCK ++A +L E+ PD + Y + F +GN+
Sbjct: 216 ANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLY 275
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
+ + ++ + P Y + + L ++ EA K +E++V G P + +
Sbjct: 276 ERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEA-KEVAEVIVSGKFPMDNDILDAL 334
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
G A + A MV G P + T + L LC+
Sbjct: 335 IGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCR 374
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 94/224 (41%), Gaps = 1/224 (0%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G S +++SY+ + SL + L Q++ + D Y +I + +
Sbjct: 77 GYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSA 136
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
++EE G + V N ++ L +G A+++ +M GV + + + I
Sbjct: 137 FWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGW 196
Query: 365 FCKSGNVSAAHKLFDEMKQKKI-VPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
FC+S + +L DE+K+ + + + +LH LCK + ++A + E+ + +P
Sbjct: 197 FCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKP 256
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
D + Y + G + E + + + G+ P Y +
Sbjct: 257 DFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFI 300
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 114/220 (51%), Gaps = 4/220 (1%)
Query: 248 WNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKL 307
++T +N +L +LCQ + +A N+ ++ PD+ ++ +++SG+ + E +
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQ-PDLQTFNILLSGWKSSEEAEAFFEE 236
Query: 308 MEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCK 367
M + KGL+P+ YN++ID+ CK+ E+ +A +++ +M + PD + YTT+I G
Sbjct: 237 M---KGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293
Query: 368 SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
G A ++ EMK+ PD +Y + + C ++ +A KL EM+ GL P+ T
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
Y A ++ ++ ++ +M+ PN + L+
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLI 393
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 110/219 (50%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ + ++YN ++ C+ ++++A+ L+ +M PDV++Y +I G IGQ +K
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
++++E++ G P+ YN I C + +A++++ EM K G+ P+ Y
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+ ++ + +L+ M + +P+ S ++ + K+ A +L+ +M+V G
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSY 420
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
+ L+ C ++ EA +MV+KG P+ V++
Sbjct: 421 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
+N ++ LC+ + +A V + KH PD + L+SG+ + A F+EMK
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K + PD V+Y S++ CK ++ +A+KL +M PD +TYT +I G G+
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
+A + +M + G P+V Y + C
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFC 327
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F K+ ++ V S + N L L + + + + +GV ++ I++ +LC
Sbjct: 131 FFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALC 190
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE--KVLKLMEELQRKGLRPN 319
++G+V A L+ M + D Y ++S C+ V+ +E+L++ P
Sbjct: 191 RIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPG 250
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
Y ++ L + G E VL +M V PD V YT ++ G + A KLFD
Sbjct: 251 LRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFD 310
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
E+ + PD +Y ++GLCK + A K+ S M +G EP+ VTY LI KAG
Sbjct: 311 ELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAG 370
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
++ A ++ +M G+ N T+ I++
Sbjct: 371 DLSRAKTLWKEMETNGVNRNSHTFDIMISA 400
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 38/249 (15%)
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQ-LEKVLKLMEELQRKGLRPNEYV 322
G+++EA + ++ VP + ++ + Q LE V +++ + R G+R E
Sbjct: 122 GRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEEST 181
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCK--------------- 367
+ +ID LC+ GEV A ++R M++ V D +Y+ L+S CK
Sbjct: 182 FGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLED 241
Query: 368 ----------------------SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
G + ++MK ++ PD V YT +L G+
Sbjct: 242 LRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADED 301
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+A KLF E+L++GL PD TY I G CK ++ A + + M + G PNVVTY I
Sbjct: 302 YPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 466 LVDGLCKRG 474
L+ L K G
Sbjct: 362 LIKALVKAG 370
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNV-PDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
Y +V+ L + G+ KE ++L QM+ C V PD+V Y +++ G K KL +EL
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMK-CDRVEPDLVCYTIVLQGVIADEDYPKADKLFDEL 312
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
GL P+ Y YN I+ LCK ++ A +++ M K G P+ V Y LI K+G++
Sbjct: 313 LLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDL 372
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
S A L+ EM+ + + ++ M+ ++ ++V AH L E M + +
Sbjct: 373 SRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEV 432
Query: 432 IYGHCKAGEMREAFSIHNQMV 452
I C+ G M +A + +V
Sbjct: 433 ISRLCEKGLMDQAVELLAHLV 453
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K + V + V + + Y IVL + +A L ++ G PDV +Y V
Sbjct: 268 KEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVY 327
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I+G C+ +E LK+M + + G PN YN +I L K G++ A+ + +EM +GV
Sbjct: 328 INGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
++ + +IS + + V AH L +E + ++ LC+ G M +A +
Sbjct: 388 NRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVE 447
Query: 412 LFSEML 417
L + ++
Sbjct: 448 LLAHLV 453
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%)
Query: 229 EGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
E +A ++F E +G++ + +YN+ ++ LC+ ++ A ++ M G+ P+VV+Y
Sbjct: 300 EDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTY 359
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
++I + G L + L +E++ G+ N + ++ +I + EVV A +L E
Sbjct: 360 NILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFN 419
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
VF + +IS C+ G + A +L
Sbjct: 420 MNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 3/226 (1%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
NT +N++L +LG + +M+ G D+ SY + + C+ G+ K +KL
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+E++ + ++ + YN +I + + V RV REM + G P+ + T+I C+
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G + A+++ DEM ++ PD ++Y + L K +++ LF M+ G+ P TY
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEIL---SLFGRMIRSGVRPKMDTY 364
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
L+ + G ++ + M + G TP+ Y ++D L ++G
Sbjct: 365 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 124/239 (51%), Gaps = 7/239 (2%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN---VPDVVSY 288
+ AI + + + + T YN+V +LC+ V EA L GN V + +
Sbjct: 134 QEAIDAYDKLDDFNLRDETSFYNLV-DALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIH 192
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+I+ G+ ++G K + +++ +G+ + + Y+ +D++CK+G+ +A ++ +EM
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
+ D V Y T+I S V ++F EM+++ P+ ++ +++ LC+ G+M +
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
A+++ EM G +PD +TY L K E+ S+ +M++ G+ P + TY +L+
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLM 368
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 3/214 (1%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
GV+ + SY+I + +C+ GK +A L +M+ DVV+Y +I +E
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+++ E++ +G PN +N II LLC++G + +A R+L EM K G PD++ Y L S
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSR 338
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
K + + LF M + + P +Y ++ + G + ++ M G PD
Sbjct: 339 LEKPSEILS---LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPD 395
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
Y A+I + G + A +M+++GL+P
Sbjct: 396 SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 44/271 (16%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN---VPDVVSYGVIISGYCQIG 299
E G T ++N V+ L + + + + L+ +M GN VP+ V++ ++ Y
Sbjct: 74 ESGFRHTTETFNRVIDILGKYFEFEISWALINRM--IGNTESVPNHVTFRIVFKRYVTAH 131
Query: 300 QLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV----------------- 342
+++ + ++L LR +E + N++D LC++ VVEAE +
Sbjct: 132 LVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTK 190
Query: 343 ---------------------LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
++M GV D Y+ + CKSG A KL+ EM
Sbjct: 191 IHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEM 250
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K +++ D V+Y +++ + + ++F EM G EP+ T+ +I C+ G M
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 310
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
R+A+ + ++M ++G P+ +TY L L K
Sbjct: 311 RDAYRMLDEMPKRGCQPDSITYMCLFSRLEK 341
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
Query: 223 RLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV 282
R G +G + IRVFRE E G N ++N ++ LC+ G++++A+ +L +M G
Sbjct: 267 RAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
Query: 283 PDVVSYGVIISGYCQIGQLEK---VLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
PD ++Y C +LEK +L L + R G+RP Y ++ + G +
Sbjct: 327 PDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPV 380
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP 388
V + M + G PD+ Y +I + G + A + +EM ++ + P
Sbjct: 381 LYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 4/235 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ VF E EV + + + NI++ QL VKEA L + P+VVSY I+
Sbjct: 314 ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 373
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Y + + + L +QRK + N YN +I + K E +A +++EM G+ P
Sbjct: 374 VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP 433
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + Y+T+IS + K+G + A LF +++ + D V Y +M+ ++G M A +L
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
E+ + PD + I KAG EA + Q + G ++ + +++
Sbjct: 494 HELKL----PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMIN 544
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 116/231 (50%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F E + ++ + +Y+ ++ S + G A + L +ME D+V Y +I
Sbjct: 177 LFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSR 236
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
++ K + + L+R G+ P+ YN++I++ K EA +++EM + GV P+ V
Sbjct: 237 RLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTV 296
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
Y+TL+S + ++ A +F EMK+ D + M+ ++ + EA +LF +
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
M +EP+ V+Y ++ + +A EA + M +K + NVVTY ++
Sbjct: 357 RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 407
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 122/245 (49%), Gaps = 4/245 (1%)
Query: 223 RLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV 282
RLC +AI +F G++ + ++YN +++ + +EA L+ +M G +
Sbjct: 237 RLCD----YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVL 292
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P+ VSY ++S Y + + + L + E++ + N +ID+ + V EA+R+
Sbjct: 293 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
+ K + P+ V Y T++ + ++ A LF M++K I + V+Y +M+ K
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
+ +A L EM G+EP+ +TY+ +I KAG++ A ++ ++ G+ + V
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 463 YTILV 467
Y ++
Sbjct: 473 YQTMI 477
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 125/272 (45%), Gaps = 5/272 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F ++ + + +CN+ + + G + K A R+F ++ + N +SYN +L
Sbjct: 318 FAEMKEVNCALDLTTCNIMID-VYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 376
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ EA +L M+ +VV+Y +I Y + + EK L++E+Q +G+ PN
Sbjct: 377 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 436
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
Y+ II + K G++ A + +++ GV D V+Y T+I + + G + A +L E+
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
K +PD + + + L K G+ EA +F + G D + +I + +
Sbjct: 497 K----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRY 552
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
+ +M G P+ ++++ K+
Sbjct: 553 VNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQ 584
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 116/227 (51%)
Query: 241 YPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQ 300
+ E + + +YN+VL ++ + + AH L +M PD +Y +I+ + + G
Sbjct: 146 HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGM 205
Query: 301 LEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTT 360
+ L ++++++ + + +Y+N+I+L + + +A + + + G+ PD V Y +
Sbjct: 206 FDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNS 265
Query: 361 LISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMG 420
+I+ + K+ A L EM + ++P+ VSY+++L + K +EA +F+EM +
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 421 LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
D T +I + + ++EA + + + + PNVV+Y ++
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 129/266 (48%), Gaps = 6/266 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F L I +V S N L R+ G E AI +FR + N ++YN ++
Sbjct: 353 FWSLRKMDIEPNVVSYNTIL-RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ + ++A NL+ +M+ G P+ ++Y IIS + + G+L++ L ++L+ G+ ++
Sbjct: 412 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 471
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+Y +I + G + A+R+L E+ PDN+ T I+ K+G A +F +
Sbjct: 472 LYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQA 527
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEM 441
+ V D + M++ + + V ++F +M G PD ++ + K E
Sbjct: 528 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 587
Query: 442 REAFSIHNQMVQKG-LTPNVVTYTIL 466
+A +++ +M ++G + P+ V + +L
Sbjct: 588 EKADTVYREMQEEGCVFPDEVHFQML 613
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%)
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
P V +Y V++ + Q + L +E++++ L P+ Y Y+ +I K G A
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
L++M + V D V+Y+ LI + + S A +F +K+ I PD V+Y SM++
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
K EA L EM G+ P+ V+Y+ L+ + + + EA S+ +M + ++
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331
Query: 462 TYTILVD 468
T I++D
Sbjct: 332 TCNIMID 338
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 43/226 (19%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYN------------------- 324
DVVS+ ++ GY Q G L + L +E +R G++ NE+ +
Sbjct: 143 DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAH 202
Query: 325 ----------------NIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+IID K G++ A+R EMT D ++TTLISG+ K
Sbjct: 203 GQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT----VKDIHIWTTLISGYAKL 258
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G++ AA KLF EM +K + VS+T+++ G + G A LF +M+ +G++P++ T+
Sbjct: 259 GDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ + +R IH M++ + PN + + L+D K G
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A ++F E PE N +S+ ++ + G A +L +M G P+ ++ +
Sbjct: 264 AEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM-TKHGVF 352
I L ++ + R +RPN V +++ID+ K+G + +ERV R KH
Sbjct: 320 ASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKH--- 376
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
D V + T+IS + G A ++ D+M + ++ P+ + +L+ G + E +
Sbjct: 377 -DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRW 435
Query: 413 FSEMLVM-GLEPDEVTYTALIYGHCKAGEMRE 443
F M V G+ PD+ Y LI +AG +E
Sbjct: 436 FESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
RPN + N++I + K G+ ++A +V +M ++ + ++SG+ KSG + A
Sbjct: 79 RPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYS----WNNMVSGYVKSGMLVRARV 134
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+FD M ++ D VS+ +M+ G + G + EA + E G++ +E ++ L+
Sbjct: 135 VFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV 190
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
K+ +++ H Q++ G NVV ++D K G
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 3/239 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGN--VPDVVSYGVI 291
A+R F + + G + +S+N +L++ + L ++ N +PD +SYG++
Sbjct: 121 AMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGIL 180
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I YC G EK +++M ++Q KG+ + I+ L K GE+ A+ + EM K G
Sbjct: 181 IKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGC 240
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
DN Y I K + +L +EM + PD +SY ++ C+ G + EA K
Sbjct: 241 ELDNAAYNVRIMSAQKE-SPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKK 299
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
++ + P+ T+ LI+ C + + ++I + V P+ T LV GL
Sbjct: 300 VYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGL 358
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 98/218 (44%), Gaps = 6/218 (2%)
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVS---YGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
+L K + ++ +E N P + Y +I Y Q ++ E++ + G
Sbjct: 76 RLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPR 135
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTK--HGVFPDNVVYTTLISGFCKSGNVSAAHK 376
+ +N +++ + + ++ E+ + + + PD + Y LI +C SG A +
Sbjct: 136 SAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIE 195
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+ +M+ K + +++T++L L K G++ A L++EM+ G E D Y I
Sbjct: 196 IMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQ 255
Query: 437 KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
K R I +M GL P+ ++Y L+ C+RG
Sbjct: 256 KESPERVKELIE-EMSSMGLKPDTISYNYLMTAYCERG 292
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++AI + R+ G+ T+++ +L SL + G+++ A NL +M G D +Y V
Sbjct: 191 EKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVR 250
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I Q E+V +L+EE+ GL+P+ YN ++ C+ G + EA++V + +
Sbjct: 251 IMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNC 309
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ + TLI C S + +F + +PDF + ++ GL + K +A
Sbjct: 310 APNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKG 369
Query: 412 L 412
L
Sbjct: 370 L 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A ++ E + G + +YN+ + S Q + L+ +M G PD +SY +++
Sbjct: 228 ADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMT 286
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
YC+ G L++ K+ E L+ PN + +I LC + + + ++ P
Sbjct: 287 AYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIP 346
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS 392
D L+ G ++ A L +K KK P F++
Sbjct: 347 DFNTLKHLVVGLVENKKRDDAKGLIRTVK-KKFPPSFLN 384
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 125/249 (50%), Gaps = 20/249 (8%)
Query: 233 RAIRVFREYPEV-----GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVS 287
R +++ R Y + GVSW TM + +LG V+ A L M + D +
Sbjct: 246 REMKLARTYFDAMPQKNGVSWITM-----ISGYTKLGDVQSAEELFRLM----SKKDKLV 296
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKG--LRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
Y +I+ Y Q G+ + LKL ++ + ++P+E ++++ + G V
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESY 356
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
+T+HG+ D+++ T+LI + K G+ + A K+F + +K D VSY++M+ G G
Sbjct: 357 ITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTVSYSAMIMGCGINGM 412
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
EA+ LF+ M+ + P+ VT+T L+ + +G ++E + N M L P+ Y I
Sbjct: 413 ATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGI 472
Query: 466 LVDGLCKRG 474
+VD L + G
Sbjct: 473 MVDMLGRAG 481
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 9/221 (4%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV--PDVVSYGVIISGYCQIGQLEKVLK 306
+ + Y+ ++ Q GK K+A L QM + PD ++ ++S Q+G
Sbjct: 293 DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW 352
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
+ + G++ ++ + ++IDL K G+ +A ++ + K D V Y+ +I G
Sbjct: 353 VESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNK----KDTVSYSAMIMGCG 408
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
+G + A+ LF M +KKI P+ V++T +L G + E +K F+ M LEP
Sbjct: 409 INGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSAD 468
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
Y ++ +AG + EA+ + M + PN + L+
Sbjct: 469 HYGIMVDMLGRAGRLEEAYELIKSMP---MQPNAGVWGALL 506
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
NT+S+N +LH + G++ EA + ++ D VS+ +IIS Y + G + L
Sbjct: 169 NTVSWNSLLHGYLESGELDEARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLF 224
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+ K + +N +I E+ A M + + V + T+ISG+ K
Sbjct: 225 SAMPLK----SPASWNILIGGYVNCREMKLARTYFDAMPQ----KNGVSWITMISGYTKL 276
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMG--LEPDEV 426
G+V +A +LF M +K D + Y +M+ + GK +A KLF++ML ++PDE+
Sbjct: 277 GDVQSAEELFRLMSKK----DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEI 332
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
T ++++ + + G + + + + G+ + + T L+D K G
Sbjct: 333 TLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGG 380
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 281 NVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAE 340
N D S+G ++ Q + ++ + + ++ G+ P+ + +++ K +V+ +
Sbjct: 65 NGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGK 124
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGL 400
+ + K+G+ V T L+ + + G + A K FD++ +K + VS+ S+LHG
Sbjct: 125 PIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEK----NTVSWNSLLHGY 180
Query: 401 CKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
+ G++ EA ++F ++ E D V++ +I + K G+M A S+ + M K +P
Sbjct: 181 LESGELDEARRVFDKI----PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK--SP-- 232
Query: 461 VTYTILVDG 469
++ IL+ G
Sbjct: 233 ASWNILIGG 241
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 147/346 (42%), Gaps = 44/346 (12%)
Query: 156 DVHHLFDQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVD 215
+ H +FD+ ++R D + ++V F + +GI +
Sbjct: 161 EFHQVFDEMSKR------DGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLV 214
Query: 216 SCNLFLTRLCGNFEGKKRAIRVF-REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLM 274
+ + L LC ++ + A +F E G M N++L+ C LG V EA
Sbjct: 215 AFHGLLMWLC-RYKHVEFAETLFCSRRREFGCDIKAM--NMILNGWCVLGNVHEAKRFWK 271
Query: 275 QMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNG 334
+ PDVVSYG +I+ + G+L K ++L + P+ + NN+ID LC
Sbjct: 272 DIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKK 331
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQK--KIVPDFVS 392
+ EA V RE+++ G P+ V Y +L+ CK +L +EM+ K P+ V+
Sbjct: 332 RIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT 391
Query: 393 Y---------------------------TSMLHGL-----CKIGKMVEAHKLFSEMLVMG 420
+ TS L+ L + K + +++SEM G
Sbjct: 392 FSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSG 451
Query: 421 LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
L PD+ TYT I+G G++ EA S +M+ KG+ P T +L
Sbjct: 452 LGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 112/225 (49%), Gaps = 3/225 (1%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
++M YN +L L ++ + +E H + +M + +Y V+++ Y ++++ + +
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLI-SGFCK 367
E + G+ + ++ ++ LC+ V AE + ++ F ++ +I +G+C
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF--CSRRREFGCDIKAMNMILNGWCV 259
Query: 368 SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
GNV A + + ++ K PD VSY +M++ L K GK+ +A +L+ M PD
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+I C + EA + ++ +KG PNVVTY L+ LCK
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 364
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 111/234 (47%), Gaps = 3/234 (1%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
+VF E + N +Y ++L+ KV EA + + + G D+V++ ++
Sbjct: 164 QVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWL 223
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
C+ +E L +R+ + N I++ C G V EA+R +++ PD
Sbjct: 224 CRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDV 282
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
V Y T+I+ K G + A +L+ M + PD +++ LC ++ EA ++F E
Sbjct: 283 VSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFRE 342
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG--LTPNVVTYTILV 467
+ G +P+ VTY +L+ CK + + + +M KG +PN VT++ L+
Sbjct: 343 ISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL 396
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
+YN I+D+L K E +V EM+K F + Y L++ + + V A +F+
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR 204
Query: 382 KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF-SEMLVMGLEPDEVTYTALIYGHCKAGE 440
K+ I D V++ +L LC+ + A LF S G D ++ G C G
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCVLGN 262
Query: 441 MREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ EA ++ P+VV+Y +++ L K+G
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKG 296
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 7/277 (2%)
Query: 202 FHKLLSYGIVVSVDSCNL-FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSL 260
F ++SYG V+ D C L ++ + + + + E G + + Y V+ S
Sbjct: 528 FESMMSYG--VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSF 585
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+LG++ A + +M PDVV YGV+I+ + G +++ + +E ++ G+ N
Sbjct: 586 VKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNS 645
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTK---HGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
+YN++I L K G + EAE + R++ + +PD +I+ + + V A +
Sbjct: 646 VIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAI 705
Query: 378 FDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
FD MKQ+ +F ++ ML K G+ EA ++ +M M + D ++Y +++
Sbjct: 706 FDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFAL 764
Query: 438 AGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G +EA +MV G+ P+ T+ L L K G
Sbjct: 765 DGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 8/243 (3%)
Query: 232 KRAIRVFREYPEVGV-SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
+RA+ +F + G N + YNI+L L + K + +L +M G P +YG
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+I Y + G L + ++ + G++P+E ++ + K E +AE ++ +
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 351 VFPDNVV------YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
D+ V Y T+I + KSG + A + F M ++ IVP V++ +M+H G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
++ E L M + PD TY LI H K ++ A + +M GL P+ V+Y
Sbjct: 348 QLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYR 406
Query: 465 ILV 467
L+
Sbjct: 407 TLL 409
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 127/276 (46%), Gaps = 13/276 (4%)
Query: 209 GIVVSVDSCNL--------FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSL 260
G++ +D N+ LTR+ E +++ F+ + G + ++ Y+ + +
Sbjct: 423 GLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAY 481
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+ G + EA + + + N V+ Y V+I Y EK +L E + G+ P++
Sbjct: 482 GERGYLSEAERVFICCQEV-NKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDK 540
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
YN ++ +L + L +M + G D + Y +IS F K G ++ A +++ E
Sbjct: 541 CTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKE 600
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M + I PD V Y +++ G + +A M G+ + V Y +LI + K G
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGY 660
Query: 441 MREAFSIHNQMVQ---KGLTPNVVTYTILVDGLCKR 473
+ EA +I+ +++Q K P+V T +++ +R
Sbjct: 661 LDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSER 696
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
+Y +I Y + GQ+++ + + + +G+ P +N +I + NG++ E +++ M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 347 TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
H PD Y LIS K+ ++ A F EMK + PD VSY ++L+ +
Sbjct: 360 KLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFS------IHNQMVQKGLTPNV 460
EA L +EM +E DE T +AL + +A + +++S + M +G + N+
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI 478
Query: 461 VTY 463
Y
Sbjct: 479 DAY 481
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 35/277 (12%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+RA F+E + G+ + +SY +L++ V+EA L+ +M+ D + +
Sbjct: 384 ERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSAL 443
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV--------- 342
Y + LEK + G +E Y+ ID + G + EAERV
Sbjct: 444 TRMYVEAEMLEKSWSWFKRFHVAGNMSSE-GYSANIDAYGERGYLSEAERVFICCQEVNK 502
Query: 343 -------------------------LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
M +GV PD Y TL+ +
Sbjct: 503 RTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY 562
Query: 378 FDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
++M++ V D + Y +++ K+G++ A +++ EM+ +EPD V Y LI
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 438 AGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G +++A S M + G+ N V Y L+ K G
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 17/184 (9%)
Query: 257 LHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL 316
+H+LC LGK M G PD V+ G+++ Y + + +K + ++
Sbjct: 239 VHALCWLGK----------MSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDEN 288
Query: 317 RPNE------YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
+ + Y YN +ID K+G++ EA + M + G+ P V + T+I + +G
Sbjct: 289 KADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQ 348
Query: 371 VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTA 430
+ L MK PD +Y ++ K + A F EM GL+PD V+Y
Sbjct: 349 LGEVTSLMKTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 431 LIYG 434
L+Y
Sbjct: 408 LLYA 411
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
V ++ +YN ++ + + G++KEA +M G VP V++ +I Y GQL +V
Sbjct: 294 VCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVT 353
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
LM+ ++ P+ YN +I L KN ++ A +EM G+ PD V Y TL+ F
Sbjct: 354 SLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAF 412
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
V A L EM + D + +++ + + ++ F V G E
Sbjct: 413 SIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE 472
Query: 426 VTYTALIYGHCKAGEMREA 444
Y+A I + + G + EA
Sbjct: 473 -GYSANIDAYGERGYLSEA 490
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 240 EYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIG 299
+YP+V S N +++ + V++A + M+ G + ++ +++ Y + G
Sbjct: 679 QYPDVYTS------NCMINLYSERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNG 731
Query: 300 QLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYT 359
+ E+ ++ ++++ + + YN+++ L +G EA +EM G+ PD+ +
Sbjct: 732 RFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFK 791
Query: 360 TLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
+L + K G A + +E+++K+I + S L L IG V+
Sbjct: 792 SLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGDCVD 840
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 235 IRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISG 294
+ +FRE + G+ NT++Y ++ L Q G A + +M G PD+++Y +++ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 295 YCQIGQLEKVL---------KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
C+ G+LEK L L L KG++PN Y +I CK G EA + R+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSY---TSMLH 398
M + G PD+ Y TLI + G+ +A+ +L EM+ + D +Y T MLH
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 176
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 9/136 (6%)
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGL 400
+ REM++ G+ + V YTTLI G ++G+ A ++F EM + PD ++Y +L GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 401 CKIGKMVEA---------HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM 451
CK GK+ +A LF + + G++P+ VTYT +I G CK G EA+++ +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 452 VQKGLTPNVVTYTILV 467
+ G P+ TY L+
Sbjct: 122 KEDGPLPDSGTYNTLI 137
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
++L E+ ++GL N Y +I L + G+ A+ + +EM GV PD + Y L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 365 FCKSGNVSAA---------HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
CK+G + A LF + K + P+ V+YT+M+ G CK G EA+ LF +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
M G PD TY LI H + G+ + + +M + TY ++ D
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
+LF EM Q+ +V + V+YT+++ GL + G A ++F EM+ G+ PD +TY L+ G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 436 CK---------AGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
CK AG++ + + + + KG+ PNVVTYT ++ G CK+G
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKG 109
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQ---------LGKVKEAHNLLMQMEFCGNVPD 284
A +F+E GV + M+YNI+L LC+ GKV++ +L + G P+
Sbjct: 35 AQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPN 94
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
VV+Y +ISG+C+ G E+ L +++ G P+ YN +I ++G+ + +++
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 154
Query: 345 EM 346
EM
Sbjct: 155 EM 156
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 132/265 (49%), Gaps = 15/265 (5%)
Query: 210 IVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEA 269
+V V + ++ + CG+ E ++ VF E P + +S+N +++ ++G+ ++A
Sbjct: 189 LVSHVHNASIHMFASCGDMENARK---VFDESP----VRDLVSWNCLINGYKKIGEAEKA 241
Query: 270 HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDL 329
+ ME G PD V+ ++S +G L + + E ++ GLR + N ++D+
Sbjct: 242 IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDM 301
Query: 330 LCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
K G++ EA R+ + K + V +TT+ISG+ + G + + KLFD+M++K D
Sbjct: 302 FSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDVSRKLFDDMEEK----D 353
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
V + +M+ G + + +A LF EM +PDE+T + + G + IH
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 450 QMVQKGLTPNVVTYTILVDGLCKRG 474
+ + L+ NV T LVD K G
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCG 438
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 18/252 (7%)
Query: 225 CGNFEGKKRAIRVFREYPE-VGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
CG+ A R+F + VSW TM I ++ C L V + L ME
Sbjct: 305 CGDIH---EARRIFDNLEKRTIVSWTTM---ISGYARCGLLDV--SRKLFDDME----EK 352
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
DVV + +I G Q + + L L +E+Q +P+E + + + G + +
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
R + K+ + + + T+L+ + K GN+S A +F ++ + + ++YT+++ GL
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALH 468
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVT 462
G A F+EM+ G+ PDE+T+ L+ C G ++ +QM + L P +
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 463 YTILVDGLCKRG 474
Y+I+VD L + G
Sbjct: 529 YSIMVDLLGRAG 540
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
V WN M V Q + ++A L +M+ PD ++ +S Q+G L+ +
Sbjct: 355 VLWNAMIGGSV-----QAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN-VVYTTLISG 364
+ +++ L N + +++D+ K G + EA V HG+ N + YT +I G
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVF-----HGIQTRNSLTYTAIIGG 464
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV-MGLEP 423
G+ S A F+EM I PD +++ +L C G + FS+M L P
Sbjct: 465 LALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNP 524
Query: 424 DEVTYTALIYGHCKAGEMREAFSIHNQM 451
Y+ ++ +AG + EA + M
Sbjct: 525 QLKHYSIMVDLLGRAGLLEEADRLMESM 552
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 127/253 (50%), Gaps = 9/253 (3%)
Query: 223 RLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV 282
+ CGN + +V + + G++ N+ N V+ + ++++A + +
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL----SE 436
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
++VSY + G C+ E+ KL+ E+ + L + + + +++ + G + + E++
Sbjct: 437 KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI 496
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
++ K G+ + V LIS + K G++ A ++F+ M+ + + +S+TSM+ G K
Sbjct: 497 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV----ISWTSMITGFAK 552
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVV 461
G + + F++M+ G++P+EVTY A++ G + E + N M + + P +
Sbjct: 553 HGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612
Query: 462 TYTILVDGLCKRG 474
Y +VD LC+ G
Sbjct: 613 HYACMVDLLCRAG 625
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 9/221 (4%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
E + +++ YN ++ + G +A ++ M G DVVS+ +++ Y G+
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK-RDVVSWSAMMACYGNNGREL 148
Query: 303 KVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV-LREMTKHGVFPDNV-VYTT 360
+K+ E GL PN+Y Y +I C N + V RV L + K G F +V V +
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIR-ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207
Query: 361 LISGFCKSGN-VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVM 419
LI F K N A+K+FD+M + + V++T M+ ++G EA + F +M++
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNV----VTWTLMITRCMQMGFPREAIRFFLDMVLS 263
Query: 420 GLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
G E D+ T +++ + + +H+ ++ GL +V
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 299 GQLEKVLKLMEELQRKGLRPNEYV-YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVV 357
G L + ++ + R G+RP + V +++++ + + + V + + + PD+V+
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 358 YTTLISGFCKSGNVSAAHKLFDEMKQ--KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
Y +LIS + KSG+ + A +F+ M++ K+ D VS+++M+ G+ ++A K+F E
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKR---DVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 416 MLVMGLEPDEVTYTALI 432
L +GL P++ YTA+I
Sbjct: 157 FLELGLVPNDYCYTAVI 173
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 140/332 (42%), Gaps = 34/332 (10%)
Query: 133 AVASNDLKMAQTLVFEFWATPRL-DVHHLFDQFTERLIYTYK---DWGAHPLVFDVFFQX 188
+ASN +A +++ F + R+ D F+ +E+ + +Y D L F+ F+
Sbjct: 403 GLASNS-SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461
Query: 189 XXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLTRLCG--NFEGKKRAIRVFREYPEVGV 246
F F + L G N ++ ++ + ++G+
Sbjct: 462 LSEITERELGVSAF----------------TFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 247 SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK 306
S N N ++ + G + A + ME +V+S+ +I+G+ + G +VL+
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFME----NRNVISWTSMITGFAKHGFAIRVLE 561
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK-HGVFPDNVVYTTLISGF 365
++ +G++PNE Y I+ G V E R M + H + P Y ++
Sbjct: 562 TFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLL 621
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
C++G ++ A + + M + D + + + L G C++ E KL + ++ L+P+E
Sbjct: 622 CRAGLLTDAFEFINTMPFQ---ADVLVWRTFL-GACRVHSNTELGKLAARK-ILELDPNE 676
Query: 426 -VTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
Y L + AG+ E+ + +M ++ L
Sbjct: 677 PAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 115/230 (50%), Gaps = 4/230 (1%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ + +N+++ + Q + KEA +L +Q+ VP +Y ++I YC G +E+ ++
Sbjct: 176 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 235
Query: 309 EELQRKGLRPNEY---VYNNIID-LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
E+Q + P VYN I+ L+ + G EA V + M + P Y +I+
Sbjct: 236 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 295
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+ K+ + KL+ EM+ + P+ +YT++++ + G +A ++F ++ GLEPD
Sbjct: 296 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 355
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
Y AL+ + +AG A I + M G P+ +Y I+VD + G
Sbjct: 356 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%)
Query: 211 VVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAH 270
+ V N ++ L + AI VF+ T +YN++++ + K +
Sbjct: 247 TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSW 306
Query: 271 NLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLL 330
L +M P++ +Y +++ + + G EK ++ E+LQ GL P+ YVYN +++
Sbjct: 307 KLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 366
Query: 331 CKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDF 390
+ G A + M G PD Y ++ + ++G S A +F+EMK+ I P
Sbjct: 367 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 426
Query: 391 VSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQ 450
S+ +L K + + + EM G+EPD +++ + + G+ + I +
Sbjct: 427 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486
Query: 451 MVQKGLTPNVVTYTILVDGLCKRG 474
M T ++ TY IL++ K G
Sbjct: 487 MENGPCTADISTYNILINIYGKAG 510
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 111/238 (46%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++A +F + E G+ + YN ++ S + G A + M+ G PD SY ++
Sbjct: 338 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 397
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ Y + G + EE++R G+ P + ++ K +V + E +++EM+++GV
Sbjct: 398 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 457
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD V ++++ + + G + K+ EM+ D +Y +++ K G + +
Sbjct: 458 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEE 517
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
LF E+ PD VT+T+ I + + + + +M+ G P+ T +L+
Sbjct: 518 LFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 1/237 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +F +G + SYNI++ + + G +A + +M+ G P + S+ +++S
Sbjct: 375 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 434
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Y + + K +++E+ G+ P+ +V N++++L + G+ + E++L EM
Sbjct: 435 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 494
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y LI+ + K+G + +LF E+K+K PD V++TS + + V+ ++F
Sbjct: 495 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 554
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
EM+ G PD T L+ C + E E + + + KG+T + + ++ L
Sbjct: 555 EEMIDSGCAPDGGTAKVLL-SACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKSL 610
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N +Y ++++ + G ++A + Q++ G PDV Y ++ Y + G ++
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+Q G P+ YN ++D + G +AE V EM + G+ P + L+S + K+
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 439
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
+V+ + EM + + PD SML+ ++G+ + K+ +EM D TY
Sbjct: 440 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 499
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
LI + KAG + + ++ +K P+VVT+T
Sbjct: 500 NILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
PDV+ + ++I Y Q Q ++ L +L P E Y +I C G + AE V
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 343 LREMTKHGVFPDNV---VYTTLISGFCK-SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
L EM H V P + VY I G K GN A +F MK+ + P +Y M++
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
K K + KL+ EM +P+ TYTAL+ + G +A I Q+ + GL P
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 459 NVVTYTILVDGLCKRG 474
+V Y L++ + G
Sbjct: 355 DVYVYNALMESYSRAG 370
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 311 LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
L++ +P+ +N +ID + + EAE + ++ + P Y LI +C +G
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 371 VSAAHKLFDEMKQKKIVPDFVS---YTSMLHGLCK-IGKMVEAHKLFSEMLVMGLEPDEV 426
+ A + EM+ + P + Y + + GL K G EA +F M +P
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY +I + KA + ++ ++ +M PN+ TYT LV+ + G
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREG 335
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 115/230 (50%), Gaps = 4/230 (1%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+ + +N+++ + Q + KEA +L +Q+ VP +Y ++I YC G +E+ ++
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 309 EELQRKGLRPNEY---VYNNIID-LLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
E+Q + P VYN I+ L+ + G EA V + M + P Y +I+
Sbjct: 214 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 273
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+ K+ + KL+ EM+ + P+ +YT++++ + G +A ++F ++ GLEPD
Sbjct: 274 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 333
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
Y AL+ + +AG A I + M G P+ +Y I+VD + G
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%)
Query: 211 VVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAH 270
+ V N ++ L + AI VF+ T +YN++++ + K +
Sbjct: 225 TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSW 284
Query: 271 NLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLL 330
L +M P++ +Y +++ + + G EK ++ E+LQ GL P+ YVYN +++
Sbjct: 285 KLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 344
Query: 331 CKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDF 390
+ G A + M G PD Y ++ + ++G S A +F+EMK+ I P
Sbjct: 345 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 404
Query: 391 VSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQ 450
S+ +L K + + + EM G+EPD +++ + + G+ + I +
Sbjct: 405 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
Query: 451 MVQKGLTPNVVTYTILVDGLCKRG 474
M T ++ TY IL++ K G
Sbjct: 465 MENGPCTADISTYNILINIYGKAG 488
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 111/238 (46%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++A +F + E G+ + YN ++ S + G A + M+ G PD SY ++
Sbjct: 316 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ Y + G + EE++R G+ P + ++ K +V + E +++EM+++GV
Sbjct: 376 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 435
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
PD V ++++ + + G + K+ EM+ D +Y +++ K G + +
Sbjct: 436 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEE 495
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
LF E+ PD VT+T+ I + + + + +M+ G P+ T +L+
Sbjct: 496 LFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 1/237 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +F +G + SYNI++ + + G +A + +M+ G P + S+ +++S
Sbjct: 353 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 412
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
Y + + K +++E+ G+ P+ +V N++++L + G+ + E++L EM
Sbjct: 413 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 472
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D Y LI+ + K+G + +LF E+K+K PD V++TS + + V+ ++F
Sbjct: 473 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 532
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
EM+ G PD T L+ C + E E + + + KG+T + + ++ L
Sbjct: 533 EEMIDSGCAPDGGTAKVLL-SACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKSL 588
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N +Y ++++ + G ++A + Q++ G PDV Y ++ Y + G ++
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+Q G P+ YN ++D + G +AE V EM + G+ P + L+S + K+
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
+V+ + EM + + PD SML+ ++G+ + K+ +EM D TY
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 477
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
LI + KAG + + ++ +K P+VVT+T
Sbjct: 478 NILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
PDV+ + ++I Y Q Q ++ L +L P E Y +I C G + AE V
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 343 LREMTKHGVFPDNV---VYTTLISGFCK-SGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
L EM H V P + VY I G K GN A +F MK+ + P +Y M++
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
K K + KL+ EM +P+ TYTAL+ + G +A I Q+ + GL P
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 459 NVVTYTILVDGLCKRG 474
+V Y L++ + G
Sbjct: 333 DVYVYNALMESYSRAG 348
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 311 LQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGN 370
L++ +P+ +N +ID + + EAE + ++ + P Y LI +C +G
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 371 VSAAHKLFDEMKQKKIVPDFVS---YTSMLHGLCK-IGKMVEAHKLFSEMLVMGLEPDEV 426
+ A + EM+ + P + Y + + GL K G EA +F M +P
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
TY +I + KA + ++ ++ +M PN+ TYT LV+ + G
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREG 313
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 13/242 (5%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +FR PE N+ S++ ++ G++ A L M +VVS+ +I+
Sbjct: 215 ATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMP----EKNVVSWTTLIN 266
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+ Q G E + E+ KGL+PNEY ++ K+G + R+ + +G+
Sbjct: 267 GFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKL 326
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D + T L+ + K G + A +F M K D +S+T+M+ G G+ +A + F
Sbjct: 327 DRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCF 382
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM-VQKGLTPNVVTYTILVDGLCK 472
+M+ G +PDEV + A++ + E+ + + M + + P + Y ++VD L +
Sbjct: 383 RQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGR 442
Query: 473 RG 474
G
Sbjct: 443 AG 444
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+I G + + E ++ + R G++P+ + ++ K G + K+
Sbjct: 96 ALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKN 155
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
V D+ V +L+ + K+G + A ++F+E + + + +++G C+ M A
Sbjct: 156 FVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMA 215
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
LF M E + +++ LI G+ +GE+ A + M +K NVV++T L++G
Sbjct: 216 TTLFRSM----PERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK----NVVSWTTLING 267
Query: 470 LCKRG 474
+ G
Sbjct: 268 FSQTG 272
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 9/242 (3%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQ--MEFCGNVPDVVSYGVI 291
A+++F E ++G +S+N +L + + L + + PD +SYG++
Sbjct: 121 AMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGML 180
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I YC G+ EK +++M +++ KG+ + I+ L KNG V EAE + EM G
Sbjct: 181 IKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC 240
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
DN VY + K + +L +EM + PD VSY ++ C G M EA K
Sbjct: 241 DLDNTVYNVRLMNAAKE-SPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKK 299
Query: 412 LFSEMLVMGLE-PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
++ GLE P+ T+ LI+ C G + ++ + P+ T L +GL
Sbjct: 300 VYE-----GLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGL 354
Query: 471 CK 472
K
Sbjct: 355 VK 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 79/196 (40%), Gaps = 4/196 (2%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP--NEYVYNNIIDLLCKNGEVVEAE 340
P ++ S ++ +K L + + + P + Y + L K+ + E
Sbjct: 28 PGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIE 87
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGL 400
++ + +TLI + ++ A K+F+EM + VS+ ++L
Sbjct: 88 ALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAAC 147
Query: 401 CKIGKMVEAHKLFSE--MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
+LF E + PD+++Y LI +C +G+ +A I M KG+
Sbjct: 148 LHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEV 207
Query: 459 NVVTYTILVDGLCKRG 474
++ +T ++ L K G
Sbjct: 208 TIIAFTTILGSLYKNG 223
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 14/250 (5%)
Query: 214 VDSCNLFLTRLCGNF--EGKKRAIRVFREYPEVG----VSWNTMSYNIVLHSLCQLGKVK 267
VD ++ + G F E +K A+ + E VG V + M+YN VL +L + GK
Sbjct: 270 VDDGVVYGQLMKGYFMKEMEKEAMECYEEA--VGENSKVRMSAMAYNYVLEALSENGKFD 327
Query: 268 EAHNLLMQMEFCGNVP-----DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
EA L ++ N P ++ ++ V+++GYC G+ E+ +++ ++ P+
Sbjct: 328 EALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLS 387
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
+NN+++ LC N + EAE++ EM + V PD Y L+ K G + + M
Sbjct: 388 FNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMV 447
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
+ + P+ Y + L K GK+ +A F +M+V L+ D+ Y ++ +AG +
Sbjct: 448 ESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLD 506
Query: 443 EAFSIHNQMV 452
E I ++M+
Sbjct: 507 EMLKIVDEML 516
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 14/233 (6%)
Query: 256 VLHSLCQLGKVK--EAHNLL-----MQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
V++S +G VK +A +L ++ + G V D V YG ++ GY ++ ++
Sbjct: 237 VVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECY 296
Query: 309 EEL--QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVV-----YTTL 361
EE + +R + YN +++ L +NG+ EA ++ + K P ++ + +
Sbjct: 297 EEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVM 356
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
++G+C G A ++F +M K PD +S+ ++++ LC + EA KL+ EM +
Sbjct: 357 VNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNV 416
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+PDE TY L+ K G++ E + + MV+ L PN+ Y L D L K G
Sbjct: 417 KPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAG 469
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP-----NEYVYNNIIDLLCKNGEVVEA 339
++Y ++ + G+ ++ LKL + ++++ P N +N +++ C G+ EA
Sbjct: 310 AMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEA 369
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
V R+M PD + + L++ C + ++ A KL+ EM++K + PD +Y ++
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT 429
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
K GK+ E + M+ L P+ Y L KAG++ +A S + MV K L +
Sbjct: 430 CFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMD 488
Query: 460 VVTYTILVDGLCKRG 474
Y ++ L + G
Sbjct: 489 DEAYKFIMRALSEAG 503
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 210 IVVSVDSCNLFLTRLC--GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
+ V++ + N+ + C G FE A+ VFR+ + S +T+S+N +++ LC +
Sbjct: 346 LAVNLGTFNVMVNGYCAGGKFE---EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLA 402
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
EA L +ME PD +YG+++ + G++++ + + LRPN VYN +
Sbjct: 403 EAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQ 462
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEM 381
D L K G++ +A+ +M + D+ Y ++ ++G + K+ DEM
Sbjct: 463 DQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 102/258 (39%), Gaps = 52/258 (20%)
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL---KLMEELQRKGLR 317
+ G + + H + Q G P++++Y +I Y + + E L KL + L
Sbjct: 144 AKYGALLQLHGFINQ---AGIAPNIITYNLIFQAYLDVRKPEIALEHYKLF--IDNAPLN 198
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
P+ + ++ L N + +A + +M G D VVY+ L+ G K+ + KL
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 378 FDEMKQK---------------------------------------KIVPDFVSYTSMLH 398
+ E+K+K K+ ++Y +L
Sbjct: 259 YQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLE 318
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEV-----TYTALIYGHCKAGEMREAFSIHNQMVQ 453
L + GK EA KLF + P + T+ ++ G+C G+ EA + QM
Sbjct: 319 ALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGD 378
Query: 454 KGLTPNVVTYTILVDGLC 471
+P+ +++ L++ LC
Sbjct: 379 FKCSPDTLSFNNLMNQLC 396
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 125/250 (50%), Gaps = 18/250 (7%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A+R+F GV N +++N+++ SL + G+V EA ++ +QM+ G +P+++S+ ++
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+G Q G E+ + + ++Q GLRPN + + C + + R T HG
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALS-ACAHLASLHIGR-----TIHGYI 572
Query: 353 PDNV-------VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
N+ + T+L+ + K G+++ A K+F K+ + +M+ G
Sbjct: 573 IRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG----SKLYSELPLSNAMISAYALYGN 628
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYT 464
+ EA L+ + +GL+PD +T T ++ AG++ +A I +V K + P + Y
Sbjct: 629 LKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYG 688
Query: 465 ILVDGLCKRG 474
++VD L G
Sbjct: 689 LMVDLLASAG 698
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 138/290 (47%), Gaps = 49/290 (16%)
Query: 212 VSVDSCNLFLTRLCGNFEGKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAH 270
V+V +C + G EGK+ AI + G+ + + +L+ C++G ++ A
Sbjct: 275 VTVSTCLSASANMGGVEEGKQSHAIAIVN-----GMELDNILGTSLLNFYCKVGLIEYAE 329
Query: 271 NLLMQMEFCGNVPDVVSYGVIISGY------------CQIGQLEKV-------------- 304
+ +M DVV++ +IISGY CQ+ +LEK+
Sbjct: 330 MVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 305 -----LKLMEELQ----RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
LKL +E+Q R + + + ++D+ K G +V+A++V V D
Sbjct: 386 ARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST----VEKDL 441
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
+++ TL++ + +SG A +LF M+ + + P+ +++ ++ L + G++ EA +F +
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
M G+ P+ +++T ++ G + G EA +M + GL PN + T+
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
V +V S+ II C+IG E L E+ + P+ +V N+ CK ++ R
Sbjct: 135 VRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNV----CKACGALKWSR 190
Query: 342 VLREM----TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
R + K G+ V ++L + K G + A K+FDE+ + + V++ +++
Sbjct: 191 FGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALM 246
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
G + GK EA +LFS+M G+EP VT + + G + E H + G+
Sbjct: 247 VGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME 306
Query: 458 PNVVTYTILVDGLCKRG 474
+ + T L++ CK G
Sbjct: 307 LDNILGTSLLNFYCKVG 323
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 282 VPD--VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
+PD V++ ++ GY Q G+ E+ ++L +++++G+ P + + G V E
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
++ +G+ DN++ T+L++ +CK G + A +FD M +K D V++ ++ G
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISG 349
Query: 400 LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
+ G + +A + M + L+ D VT L+ + ++ + ++ +
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 460 VVTYTILVDGLCKRG 474
+V + ++D K G
Sbjct: 410 IVLASTVMDMYAKCG 424
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 36/275 (13%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEA---HNLLMQMEFCGNV------ 282
K AI FRE G+ + + VL + LG + E H +++ F ++
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 283 ----------------------PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+VVS+ ++ GY Q G+ E+ +K+ ++QR G+ P+
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
Y I + E + + G+ V +L++ + K G++ + +LF+E
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 381 MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGE 440
M V D VS+T+M+ + G+ VE +LF +M+ GL+PD VT T +I +AG
Sbjct: 432 MN----VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 441 MREAFSIHNQMVQK-GLTPNVVTYTILVDGLCKRG 474
+ + M + G+ P++ Y+ ++D + G
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSG 522
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 13/202 (6%)
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
+ L+ C G + ++ L +M NV D VS+ ++S Y Q G+ + ++L +++ +
Sbjct: 413 VTLYGKC--GDIDDSTRLFNEM----NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH 466
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT-KHGVFPDNVVYTTLISGFCKSGNVSA 373
GL+P+ +I + G V + +R + MT ++G+ P Y+ +I F +SG +
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE-VTYTALI 432
A + + M PD + +T++L C+ +E K +E L+ L+P YT L
Sbjct: 527 AMRFINGM---PFPPDAIGWTTLLSA-CRNKGNLEIGKWAAESLIE-LDPHHPAGYTLLS 581
Query: 433 YGHCKAGEMREAFSIHNQMVQK 454
+ G+ + M +K
Sbjct: 582 SIYASKGKWDSVAQLRRGMREK 603
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 237 VFREYPEV-GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI---- 291
F + P+ GV+WN + L L +G +A+N +M+ +F N+ V ++
Sbjct: 94 TFEKLPDRDGVTWNVLIEGYSLSGL--VGAAVKAYNTMMR-DFSANLTRVTLMTMLKLSS 150
Query: 292 ISGYCQIGQL--EKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
+G+ +G+ +V+KL E P Y+Y N+ G + +A++V +
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV-------GCISDAKKVFYGLDDR 203
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
+ V+Y +L+ G G + A +LF M++ D VS+ +M+ GL + G EA
Sbjct: 204 ----NTVMYNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEA 254
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+ F EM V GL+ D+ + +++ G + E IH +++ ++ + L+D
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 470 LCK 472
CK
Sbjct: 315 YCK 317
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 108/197 (54%), Gaps = 4/197 (2%)
Query: 276 MEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV-YNNIIDLLCK-N 333
M+ + P ++ ++ C+ G +EK + M L K L P + +N I++ C
Sbjct: 215 MDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIW 272
Query: 334 GEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSY 393
+V EA+R+ REM + + P+ Y+ +IS F K GN+ + +L+DEMK++ + P Y
Sbjct: 273 TDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVY 332
Query: 394 TSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
S+++ L + EA KL ++ GL+PD VTY ++I C+AG++ A ++ M+
Sbjct: 333 NSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMIS 392
Query: 454 KGLTPNVVTYTILVDGL 470
+ L+P V T+ ++ +
Sbjct: 393 ENLSPTVDTFHAFLEAV 409
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 110/223 (49%), Gaps = 5/223 (2%)
Query: 253 YNIVLHSLCQL-GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
+N++L+ C + V EA + +M P+ SY +IS + ++G L L+L +E+
Sbjct: 261 FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM 320
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
+++GL P VYN+++ +L + EA ++++++ + G+ PD+V Y ++I C++G +
Sbjct: 321 KKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKL 380
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A + M + + P ++ + L + K +E + +M + L P E T+ +
Sbjct: 381 DVARNVLATMISENLSPTVDTFHAFLEAV-NFEKTLE---VLGQMKISDLGPTEETFLLI 436
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ K + A I +M + + N Y + GL G
Sbjct: 437 LGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCG 479
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 117/255 (45%), Gaps = 4/255 (1%)
Query: 212 VSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHN 271
V V+ N+ L C + A R++RE ++ N SY+ ++ ++G + ++
Sbjct: 256 VDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLR 315
Query: 272 LLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLC 331
L +M+ G P + Y ++ + ++ +KLM++L +GL+P+ YN++I LC
Sbjct: 316 LYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLC 375
Query: 332 KNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFV 391
+ G++ A VL M + P F ++ N ++ +MK + P
Sbjct: 376 EAGKLDVARNVLATMISENLSP----TVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEE 431
Query: 392 SYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM 451
++ +L L K + A K+++EM + + Y A I G G + +A I+++M
Sbjct: 432 TFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Query: 452 VQKGLTPNVVTYTIL 466
KG N + +L
Sbjct: 492 KSKGFVGNPMLQKLL 506
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 129/304 (42%), Gaps = 32/304 (10%)
Query: 162 DQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFL 221
+ F R+I Y G D FF YG SV S N L
Sbjct: 106 EGFIVRIIMLYGKAGMTKQALDTFFNMDL-----------------YGCKRSVKSFNAAL 148
Query: 222 TRLCGNFEGKKRAIRVF-REYP-EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
L +F I F + P + G+ + +S+NI + S C+LG + A+ + +ME
Sbjct: 149 QVL--SFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKS 206
Query: 280 GNVPDVVSYGVIISGY-----CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNG 334
G PDVV+Y +IS C IG L + KG +PN +N I L
Sbjct: 207 GLTPDVVTYTTLISALYKHERCVIGN-----GLWNLMVLKGCKPNLTTFNVRIQFLVNRR 261
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
+A +L M K V PD++ Y +I GF + A +++ M K P+ Y
Sbjct: 262 RAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQ 321
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK 454
+M+H LCK G A+ + + + P+ T L+ G K G++ +A SI ++V +
Sbjct: 322 TMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHR 380
Query: 455 GLTP 458
+ P
Sbjct: 381 RVPP 384
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 32/254 (12%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP------ 283
G KR+++ F +V +S+N LH++ EF + P
Sbjct: 136 GCKRSVKSFNAALQV------LSFNPDLHTI---------------WEFLHDAPSKYGID 174
Query: 284 -DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
D VS+ + I +C++G L+ M E+++ GL P+ Y +I L K+ V +
Sbjct: 175 IDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGL 234
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG--L 400
M G P+ + I A+ L M + ++ PD ++Y ++ G L
Sbjct: 235 WNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFL 294
Query: 401 CKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
+ M E ++++ M G +P+ Y +I+ CKAG A+++ ++K PN+
Sbjct: 295 ARFPDMAE--RVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNL 352
Query: 461 VTYTILVDGLCKRG 474
T +L+ GL K+G
Sbjct: 353 DTVEMLLKGLVKKG 366
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK-GLRPNEYV 322
G K+A + M+ G V S+ + L + + + + K G+ +
Sbjct: 120 GMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVS 179
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
+N I C+ G + A +REM K G+ PD V YTTLIS K + L++ M
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 239
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
K P+ ++ + L + +A+ L M + +EPD +TY +I G A
Sbjct: 240 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPD 299
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A ++ M KG PN+ Y ++ LCK G
Sbjct: 300 MAERVYTAMHGKGYKPNLKIYQTMIHYLCKAG 331
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 107/223 (47%), Gaps = 1/223 (0%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
Y+ ++H + +++ +L +M G PD+++ ++ Y + G E+ + E L+
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLK 446
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
GLRP+E +Y +I G+ ER+++EM + VY L+ + + G+ +
Sbjct: 447 SYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDAN 506
Query: 373 AAHKLFDEMKQKKIVP-DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A + M+ P F +Y+ + K G++ +A F EM +G +PD+ L
Sbjct: 507 GAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANL 566
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + + +A + Q+ + G+ V+TYT+LVD + G
Sbjct: 567 VRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLG 609
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 3/194 (1%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEE-LQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
P+ V + +I+ + G LK+ E L K + Y+ +I + K + + ER
Sbjct: 347 PNRVDWIALIN-QLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVER 405
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
+L++M+++G+FPD + T L+ + KSGN A + F+ +K + PD Y +M+ G
Sbjct: 406 ILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYV 465
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP-NV 460
GK +L EM L+ E Y AL+ + + G+ A I + M P +
Sbjct: 466 NAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSF 525
Query: 461 VTYTILVDGLCKRG 474
Y++ V+ K G
Sbjct: 526 EAYSLFVEAYGKAG 539
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 1/224 (0%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
R+ ++ + G+ + ++ ++H + G + A ++ G PD Y +I GY
Sbjct: 405 RILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGY 464
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
G+ + +LM+E+Q K L+ +E VY ++ + G+ A + M P +
Sbjct: 465 VNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLS 524
Query: 356 V-VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
Y+ + + K+G V A FDEM++ PD +++ + +A +L
Sbjct: 525 FEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLL 584
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP 458
++ G+E +TYT L+ G + EA + ++ Q G P
Sbjct: 585 QLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAP 628
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 9/214 (4%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCG--NFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
F L SYG+ ++ + G N K R+ +E + + Y +L +
Sbjct: 442 FENLKSYGLRPDE---KIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRA 498
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVP-DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
Q+G A + M++ + P +Y + + Y + GQ++K +E+++ G +P
Sbjct: 499 YAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKP 558
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
++ N++ + +A R+L ++ K G+ + YT L+ G + A +L
Sbjct: 559 DDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLL 618
Query: 379 DEMKQKKIVPDF---VSYTSMLHGLCKIGKMVEA 409
++ Q P F VS M G+ K ++A
Sbjct: 619 VKISQLGEAPPFELQVSLCCMYSGVRNEKKTLQA 652
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 6/256 (2%)
Query: 220 FLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
L +C + + + A V R E G++ + Y ++ S + GKV + QM
Sbjct: 472 MLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNS 531
Query: 280 GNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA 339
G ++ ++G +I G + GQ+ K L+ K ++P+ V+N +I ++G V A
Sbjct: 532 GVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRA 591
Query: 340 ERVLREMTK--HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
VL EM H + PD++ L+ C +G V A +++ + + I YT +
Sbjct: 592 FDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAV 651
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI--YGHCKAGEMREAFSIHNQMVQKG 455
+ K G A ++ +M + PDEV ++ALI GH K + EAF I +G
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM--LDEAFGILQDAKSQG 709
Query: 456 LTPNVVTYTILVDGLC 471
+ ++Y+ L+ C
Sbjct: 710 IRLGTISYSSLMGACC 725
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 132/274 (48%), Gaps = 15/274 (5%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVG------VSWNTMSYNI 255
FH++ + G+ ++ + + +G RA +V + + G V + + +N
Sbjct: 525 FHQMSNSGVEANLHTFGALI-------DGCARAGQVAKAFGAYGILRSKNVKPDRVVFNA 577
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNV--PDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
++ + Q G V A ++L +M+ + PD +S G ++ C GQ+E+ ++ + + +
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHK 637
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
G+R VY ++ K+G+ A + ++M + V PD V ++ LI + +
Sbjct: 638 YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDE 697
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A + + K + I +SY+S++ C +A +L+ ++ + L P T ALI
Sbjct: 698 AFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALIT 757
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
C+ ++ +A +++ GL PN +TY++L+
Sbjct: 758 ALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 117/240 (48%), Gaps = 2/240 (0%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
K+RA++ + ++ ++ ++N+++ ++ A +L ++ G D Y
Sbjct: 448 KQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTT 507
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+IS + G+++ + ++ ++ G+ N + + +ID + G+V +A +
Sbjct: 508 LISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK--IVPDFVSYTSMLHGLCKIGKMVE 408
V PD VV+ LIS +SG V A + EMK + I PD +S +++ C G++
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
A +++ + G+ YT + K+G+ A SI+ M +K +TP+ V ++ L+D
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P + ++ +++S +E ++ +Q G+ + +Y +I K+G+V V
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
+M+ GV + + LI G ++G V+ A + ++ K + PD V + +++ +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 403 IGKMVEAHKLFSEMLVMG--LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
G + A + +EM ++PD ++ AL+ C AG++ A ++ + + G+
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 461 VTYTILVDGLCKRG 474
YTI V+ K G
Sbjct: 645 EVYTIAVNSCSKSG 658
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAH 375
L P +N ++ + + ++ A VLR + + G+ D +YTTLIS KSG V A
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
++F +M + + ++ +++ G + G++ +A + + ++PD V + ALI
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 436 CKAGEMREAFSIHNQMVQKG--LTPNVVTYTILVDGLCKRG 474
++G + AF + +M + + P+ ++ L+ C G
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV-EAERVLREMTKHGVFPDNVV 357
G+++ + L+E+L ++ L + +Y+ CK V EA R TK + P
Sbjct: 414 GRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFR----FTKLILNPTMST 469
Query: 358 YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML 417
+ L+S S ++ A + +++ + D YT+++ K GK+ ++F +M
Sbjct: 470 FNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMS 529
Query: 418 VMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G+E + T+ ALI G +AG++ +AF + + K + P+ V + L+ + G
Sbjct: 530 NSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSG 586
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 110/212 (51%), Gaps = 9/212 (4%)
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
G+V+ A+ + +M +VVS+ +ISG+ Q +++ LKL ++++ PN+Y +
Sbjct: 169 GEVENAYKVFEEMP----ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
++ +G + + V + G+ + +LIS +CK G++ A ++FD+
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML-VMGLEPDEVTYTALIYGHCKAGEMR 442
K D VS+ SM+ G + G ++A +LF M+ G +PD +TY ++ AG ++
Sbjct: 285 K----DVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVK 340
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
E N M + GL P + Y+ LVD L + G
Sbjct: 341 EGRKFFNLMAEHGLKPELNHYSCLVDLLGRFG 372
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 18/270 (6%)
Query: 202 FHKLLSYGIVVS---VDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLH 258
FH L G +S + S + L R G E A +VF E PE N +S+ ++
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVE---NAYKVFEEMPER----NVVSWTAMIS 194
Query: 259 SLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
Q +V L +M + P+ ++ ++S G L + + + GL+
Sbjct: 195 GFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKS 254
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
++ N++I + CK G++ +A R+ + + D V + ++I+G+ + G A +LF
Sbjct: 255 YLHISNSLISMYCKCGDLKDAFRIFDQFSN----KDVVSWNSMIAGYAQHGLAMQAIELF 310
Query: 379 DEMKQKK-IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
+ M K PD ++Y +L G + E K F+ M GL+P+ Y+ L+ +
Sbjct: 311 ELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGR 370
Query: 438 AGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
G ++EA + M K PN V + L+
Sbjct: 371 FGLLQEALELIENMPMK---PNSVIWGSLL 397
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+ G + Y+ ++++ L +GEV A +V EM + V V +T +ISGF + V
Sbjct: 148 KGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNV----VSWTAMISGFAQEWRVD 203
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
KL+ +M++ P+ ++T++L G + + + + L MGL+ +LI
Sbjct: 204 ICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLI 263
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+CK G++++AF I +Q K +VV++ ++ G + G
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSNK----DVVSWNSMIAGYAQHG 301
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ- 312
N ++ C+ G +K+A + Q + DVVS+ +I+GY Q G + ++L E +
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQF----SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMP 315
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+ G +P+ Y ++ G V E + M +HG+ P+ Y+ L+ + G +
Sbjct: 316 KSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQ 375
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI-GKMVEAHKLFSEMLVMGLEPD-EVTYTA 430
A +L + M K P+ V + S+L C++ G + + E L+ LEPD T+
Sbjct: 376 EALELIENMPMK---PNSVIWGSLLFS-CRVHGDVWTGIRAAEERLM--LEPDCAATHVQ 429
Query: 431 LIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
L + G +EA ++ M KGL N
Sbjct: 430 LANLYASVGYWKEAATVRKLMKDKGLKTN 458
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 140/300 (46%), Gaps = 44/300 (14%)
Query: 209 GIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSL-------- 260
G V +V S ++ N +GK+ A+ +F E GV N +Y+++L +L
Sbjct: 357 GCVGNVVSWTAMISGFLQN-DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV 415
Query: 261 -----------------------CQLGKVKEAHNLLMQMEFCG-NVPDVVSYGVIISGYC 296
+LGKV+EA + F G + D+V++ +++GY
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV-----FSGIDDKDIVAWSAMLAGYA 470
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDL-LCKNGEVVEAERVLREMTKHGVFPDN 355
Q G+ E +K+ EL + G++PNE+ +++I+++ N + + ++ K +
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 356 VVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSE 415
V + L++ + K GN+ +A ++F ++K D VS+ SM+ G + G+ ++A +F E
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREK----DLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 416 MLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYTILVDGLCKRG 474
M ++ D VT+ + AG + E + MV+ + P + +VD + G
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 11/221 (4%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N +++ + G V++A L + E V VV++ +ISGY G + L + ++
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTE----VKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
+R +E + ++I L E+ E++ + K+G D + T L+ + K +
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A +LF E+ V + VS+T+M+ G + EA LFSEM G+ P+E TY+ ++
Sbjct: 349 ALRLFKEIG---CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL- 404
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A + +H Q+V+ + T L+D K G
Sbjct: 405 ---TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLG 442
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
+VV++ +ISGY + ++VL L +Q +G +PN + + + +L + G +V
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+ K+G+ V +LI+ + K GNV A LFD+ + K + V++ SM+ G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV----VTWNSMISGYAAN 273
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
G +EA +F M + + E ++ ++I E+R +H +V+ G
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF 326
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 88/191 (46%), Gaps = 4/191 (2%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
D SY ++ G+ + G+ ++ +L + R G+ + ++++++ + + + ++
Sbjct: 57 DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLH 116
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+ K G D V T+L+ + K N K+FDEMK++ + V++T+++ G +
Sbjct: 117 CQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV----VTWTTLISGYARN 172
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
E LF M G +P+ T+ A + + G +H +V+ GL +
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 464 TILVDGLCKRG 474
L++ K G
Sbjct: 233 NSLINLYLKCG 243
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 13/242 (5%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+R+FR + + +S+ ++ + G +K A QM V D +S+ ++I
Sbjct: 290 AVRIFRSMK----ARDVISWTSIVKGYVERGNLKLARTYFDQMP----VRDRISWTIMID 341
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
GY + G + L++ E+Q G+ P+E+ +++ G + E + + K+ +
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKN 401
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
D VV LI + K G A K+F +M Q+ D ++T+M+ GL G+ EA K+F
Sbjct: 402 DVVVGNALIDMYFKCGCSEKAQKVFHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVF 457
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM-VQKGLTPNVVTYTILVDGLCK 472
+M M ++PD++TY ++ +G + +A +M + P++V Y +VD L +
Sbjct: 458 FQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGR 517
Query: 473 RG 474
G
Sbjct: 518 AG 519
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 122/232 (52%), Gaps = 25/232 (10%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F+E PE N +S+N ++ Q G++ +A L +M ++VS+ ++
Sbjct: 131 LFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALV 182
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
Q G++++ + L E + R+ + + ++D L KNG+V EA R+ M + + +
Sbjct: 183 QRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPERNI----I 234
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
+ +I+G+ ++ + A +LF M ++ DF S+ +M+ G + +M +A LF M
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG-LTPNVVTYTILV 467
E + +++T +I G+ + E EA ++ ++M++ G + PNV TY ++
Sbjct: 291 ----PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 118/219 (53%), Gaps = 27/219 (12%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVP--DVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
++ LC++GK+ EA L F G +P DVV++ +I+GY ++G + + +L + R
Sbjct: 52 LIGELCKVGKIAEARKL-----FDG-LPERDVVTWTHVITGYIKLGDMREARELFD---R 102
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
R N + ++ ++ ++ AE + +EM + V V + T+I G+ +SG +
Sbjct: 103 VDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDK 158
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A +LFDEM ++ I VS+ SM+ L + G++ EA LF M D V++TA++
Sbjct: 159 ALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERM----PRRDVVSWTAMVD 210
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
G K G++ EA + + M ++ N++++ ++ G +
Sbjct: 211 GLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQ 245
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 127/245 (51%), Gaps = 25/245 (10%)
Query: 233 RAIRVFREYPEVG-VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+A+ +F E PE VSWN+M + +L Q G++ EA NL +M DVVS+ +
Sbjct: 158 KALELFDEMPERNIVSWNSM-----VKALVQRGRIDEAMNLFERMPR----RDVVSWTAM 208
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+ G + G++++ +L + + + N +N +I +N + EA+++ + M +
Sbjct: 209 VDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPER-- 262
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
D + T+I+GF ++ ++ A LFD M +K + +S+T+M+ G + + EA
Sbjct: 263 --DFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALN 316
Query: 412 LFSEMLVMG-LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL-TPNVVTYTILVDG 469
+FS+ML G ++P+ TY +++ + E IH Q++ K + N + + L++
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH-QLISKSVHQKNEIVTSALLNM 375
Query: 470 LCKRG 474
K G
Sbjct: 376 YSKSG 380
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 234 AIRVFREYPEVG-VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
A ++F+ PE SWNTM + + ++ +A L +M +V+S+ +I
Sbjct: 252 ADQLFQVMPERDFASWNTMITGFIRNR-----EMNKACGLFDRMP----EKNVISWTTMI 302
Query: 293 SGYCQIGQLEKVLKLMEELQRKG-LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
+GY + + E+ L + ++ R G ++PN Y +I+ +VE +++ + ++K
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 362
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDE--MKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
+ +V + L++ + KSG + AA K+FD + Q+ D +S+ SM+ G EA
Sbjct: 363 QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQR----DLISWNSMIAVYAHHGHGKEA 418
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTP-NVVTYTILVD 468
+++++M G +P VTY L++ AG + + +V+ P YT LVD
Sbjct: 419 IEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVD 478
Query: 469 GLCKRG 474
LC R
Sbjct: 479 -LCGRA 483
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 107/205 (52%), Gaps = 21/205 (10%)
Query: 271 NLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLL 330
NL+ + + P V +I C++G++ + KL + L + + + ++I
Sbjct: 32 NLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDV----VTWTHVITGY 87
Query: 331 CKNGEVVEAERVLREMTKHGVFPDNVV-YTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
K G++ EA RE+ NVV +T ++SG+ +S +S A LF EM ++ +
Sbjct: 88 IKLGDMREA----RELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV--- 140
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
VS+ +M+ G + G++ +A +LF EM E + V++ +++ + G + EA ++
Sbjct: 141 -VSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMNLFE 195
Query: 450 QMVQKGLTPNVVTYTILVDGLCKRG 474
+M ++ +VV++T +VDGL K G
Sbjct: 196 RMPRR----DVVSWTAMVDGLAKNG 216
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F++ VS + ++N V+ + + G +KE +L +M PD++++ V+I Y
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYG 289
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ + EK+ + + L R +P +N++I K + +AE V ++M P +
Sbjct: 290 KKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFI 349
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
Y +I + G+VS A ++F+E+ + V + +ML C+ G +EA KLF
Sbjct: 350 TYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNA 409
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSI-HNQMVQKGLTPN 459
+ PD TY L + KA +M+E I +M + G+ PN
Sbjct: 410 SAFRVHPDASTYKFLYKAYTKA-DMKEQVQILMKKMEKDGIVPN 452
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 229 EGKKR-AIRVFREYPEVGVSWNTMSYNIV----LHSLCQLGKVKEAHNLLMQM---EFCG 280
+G+ R A+ +F E G + YN + LH+ + +++ L +M E C
Sbjct: 146 KGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQ 205
Query: 281 NVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAE 340
P+VV+Y +++ + Q G++++V L ++L + P+ Y +N ++D KNG + E E
Sbjct: 206 --PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEME 263
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGL 400
VL M + PD + + LI + K + F + + K P ++ SM+
Sbjct: 264 AVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323
Query: 401 CKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI--YGHCKAGEMREAFSIHNQMVQKGLTP 458
K + +A +F +M M P +TY +I YG+C G + A I ++ +
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVL 381
Query: 459 NVVTYTILVDGLCKRG 474
T +++ C+ G
Sbjct: 382 KASTLNAMLEVYCRNG 397
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 5/191 (2%)
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA-E 340
+PD Y +IS + GQ + L E++ G RP+ VYN +I + +A E
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 341 RVLREMTK-HGV---FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
+V + K G+ P+ V Y L+ F +SG V + LF ++ + PD ++ +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
+ K G + E + + M +PD +T+ LI + K E + +++
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 457 TPNVVTYTILV 467
P + T+ ++
Sbjct: 310 KPTLPTFNSMI 320
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 41/189 (21%)
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVF-PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ- 383
+ + L K+ + ++ V R M K + PDN VY+ LIS K G A LF EMK
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 384 ---------------------------------------KKIVPDFVSYTSMLHGLCKIG 404
++ P+ V+Y +L + G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
K+ + + LF ++ + + PD T+ ++ + K G ++E ++ +M P+++T+
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 465 ILVDGLCKR 473
+L+D K+
Sbjct: 283 VLIDSYGKK 291
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 5/185 (2%)
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKN-GEVVEAERVLREMTKH 349
+I Y + EKVL ++ P N I+D+L + G + +A + + H
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
GV P+ Y L+ FC + ++S A++LF +M ++ +VPD SY ++ G C+ G++ A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+L +ML G PD LI G C G E +M+ KG +P+ LV G
Sbjct: 245 MELLDDMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 470 LCKRG 474
C G
Sbjct: 301 FCSFG 305
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 299 GQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY 358
G L+K +L + + G+ PN YN ++ C N ++ A ++ +M + V PD Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
LI GFC+ G V+ A +L D+M K VPD +++ GLC G E K EM+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
G P L+ G C G++ EA + +++ G T + T+ +++ +C
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F+K+L + N L L + ++A +F+ GV NT SYN+++ + C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 262 QLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEY 321
+ A+ L +M VPDV SY ++I G+C+ GQ+ ++L++++ KG P+
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD-- 259
Query: 322 VYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
+I LC G E ++ L EM G P V L+ GFC G V A
Sbjct: 260 --RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
G +++A L G +P+ SY +++ +C L +L ++ + + P+ Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 324 NNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ 383
+I C+ G+V A +L +M G PD TLI G C G K +EM
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 384 KKIVPDFVSYTSMLHGLCKIGKMVEA 409
K P F ++ G C GK+ EA
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 5/182 (2%)
Query: 208 YGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
+G++ + S NL + C N + A ++F + E V + SY I++ C+ G+V
Sbjct: 184 HGVMPNTRSYNLLMQAFCLN-DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVN 242
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
A LL M G VPD +I G C G ++ K +EE+ KG P+ V N ++
Sbjct: 243 GAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 298
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
C G+V EA V+ + K+G + + +I C ++ +++I
Sbjct: 299 KGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEIT 358
Query: 388 PD 389
D
Sbjct: 359 GD 360
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
+V+ Y V + + + LEK KL +E+ +G++P+ + II +NG A
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+M+ G PDNV +I + ++GNV A L+D + +K D V++++++
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
G ++ EM +G++P+ V Y LI +A +A I+ ++ G TPN TY
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 464 TILV 467
LV
Sbjct: 354 AALV 357
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDV 285
GN++G + ++ E +GV N + YN ++ S+ + + +A + + G P+
Sbjct: 294 GNYDG---CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNW 350
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
+Y ++ Y + + L + E++ KGL +YN ++ + N V EA + ++
Sbjct: 351 STYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQD 410
Query: 346 MTK-HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
M PD+ +++LI+ + SG VS A +M++ P TS++ K
Sbjct: 411 MKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAK 470
Query: 405 KMVEAHKLFSEMLVMGLEPDE 425
++ + + F ++L +G+ PD+
Sbjct: 471 QVDDVVRTFDQVLELGITPDD 491
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 122/295 (41%), Gaps = 39/295 (13%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEG-KKRAIRVFREYPEVGVSWNTMSYNIVLHSL 260
F ++L GI D+ C G KRA+ F + G + ++ ++ +
Sbjct: 198 FDEMLERGI--KPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAY 255
Query: 261 CQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE 320
+ G V A +L + D V++ +I Y G + L + EE++ G++PN
Sbjct: 256 GRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNL 315
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDE 380
+YN +ID + + +A+ + +++ +G P+ Y L+ + ++ A ++ E
Sbjct: 316 VIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYRE 375
Query: 381 MKQKKIV------------------------------------PDFVSYTSMLHGLCKIG 404
MK+K + PD +++S++ G
Sbjct: 376 MKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 435
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
++ EA +M G EP T++I + KA ++ + +Q+++ G+TP+
Sbjct: 436 RVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 316 LRPNEYV--YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
++P+ V YN + + K+ ++ ++E++ EM + G+ PDN +TT+IS ++G
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A + F++M PD V+ +M+ + G + A L+ D VT++ LI
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+ +G +I+ +M G+ PN+V Y L+D +
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSM 325
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 221 LTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGK-VKEAHNLLMQMEFC 279
L R G A+ ++RE E G+S + YN +L S+C + V EA + M+ C
Sbjct: 356 LVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNC 414
Query: 280 GNV-PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVE 338
PD ++ +I+ Y G++ + + +++ G P +V ++I K +V +
Sbjct: 415 ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 339 AERVLREMTKHGVFPDN 355
R ++ + G+ PD+
Sbjct: 475 VVRTFDQVLELGITPDD 491
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F++ VS + ++N V+ + + G +KE +L +M PD++++ V+I Y
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYG 289
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ + EK+ + + L R +P +N++I K + +AE V ++M P +
Sbjct: 290 KKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFI 349
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
Y +I + G+VS A ++F+E+ + V + +ML C+ G +EA KLF
Sbjct: 350 TYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNA 409
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSI-HNQMVQKGLTPN 459
+ PD TY L + KA +M+E I +M + G+ PN
Sbjct: 410 SAFRVHPDASTYKFLYKAYTKA-DMKEQVQILMKKMEKDGIVPN 452
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 229 EGKKR-AIRVFREYPEVGVSWNTMSYNIV----LHSLCQLGKVKEAHNLLMQM---EFCG 280
+G+ R A+ +F E G + YN + LH+ + +++ L +M E C
Sbjct: 146 KGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQ 205
Query: 281 NVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAE 340
P+VV+Y +++ + Q G++++V L ++L + P+ Y +N ++D KNG + E E
Sbjct: 206 --PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEME 263
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGL 400
VL M + PD + + LI + K + F + + K P ++ SM+
Sbjct: 264 AVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323
Query: 401 CKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI--YGHCKAGEMREAFSIHNQMVQKGLTP 458
K + +A +F +M M P +TY +I YG+C G + A I ++ +
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVL 381
Query: 459 NVVTYTILVDGLCKRG 474
T +++ C+ G
Sbjct: 382 KASTLNAMLEVYCRNG 397
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 5/191 (2%)
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEA-E 340
+PD Y +IS + GQ + L E++ G RP+ VYN +I + +A E
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 341 RVLREMTK-HGV---FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSM 396
+V + K G+ P+ V Y L+ F +SG V + LF ++ + PD ++ +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 397 LHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
+ K G + E + + M +PD +T+ LI + K E + +++
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 457 TPNVVTYTILV 467
P + T+ ++
Sbjct: 310 KPTLPTFNSMI 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 41/189 (21%)
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVF-PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ- 383
+ + L K+ + ++ V R M K + PDN VY+ LIS K G A LF EMK
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 384 ---------------------------------------KKIVPDFVSYTSMLHGLCKIG 404
++ P+ V+Y +L + G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
K+ + + LF ++ + + PD T+ ++ + K G ++E ++ +M P+++T+
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 465 ILVDGLCKR 473
+L+D K+
Sbjct: 283 VLIDSYGKK 291
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 17/226 (7%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N N + ++ + L Q CG +PD S+ V+I + G L + L
Sbjct: 70 NVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQAL--- 126
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
+++ G + YV N I+D+ K+ V A +V ++++ NV +ISG+ K
Sbjct: 127 --VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV----MISGYWKW 180
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
GN A KLFD M + D VS+T M+ G K+ + A K F M E V++
Sbjct: 181 GNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMP----EKSVVSW 232
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
A++ G+ + G +A + N M++ G+ PN T+ I++ R
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA 278
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 16/232 (6%)
Query: 218 NLFLTRLCGNFEGKKRAIRVFRE-YPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
N F+ + K R I+ R + E+G N +++N ++ ++G + A L M
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG-LRPNEYVYNNIIDLLCKNGE 335
+VVS+ +I+GY GQ ++ E++ G +P+E +I +L G
Sbjct: 358 P----KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT---MISVLSACGH 410
Query: 336 VVEAER---VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS 392
+ + E ++ + K+ + ++ Y +LI + + GN+ A ++FDEMK++ D VS
Sbjct: 411 MADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVS 466
Query: 393 YTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREA 444
Y ++ G VE L S+M G+EPD VTYT+++ +AG ++E
Sbjct: 467 YNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEG 518
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 131/318 (41%), Gaps = 96/318 (30%)
Query: 231 KKRAIRVFREYPEVGV-SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD--VVS 287
K+ A ++F PE V SW M + KVK+ N ++ +P+ VVS
Sbjct: 183 KEEACKLFDMMPENDVVSWTVM--------ITGFAKVKDLEN---ARKYFDRMPEKSVVS 231
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNE--------------------------- 320
+ ++SGY Q G E L+L ++ R G+RPNE
Sbjct: 232 WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLID 291
Query: 321 --------YVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+V ++D+ K ++ A R+ E+ G + V + +ISG+ + G++S
Sbjct: 292 EKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMS 348
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMG-LEPDEVT---- 427
+A +LFD M ++ + VS+ S++ G G+ A + F +M+ G +PDEVT
Sbjct: 349 SARQLFDTMPKRNV----VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISV 404
Query: 428 -------------------------------YTALIYGHCKAGEMREAFSIHNQMVQKGL 456
Y +LI+ + + G + EA + ++M ++
Sbjct: 405 LSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-- 462
Query: 457 TPNVVTYTILVDGLCKRG 474
+VV+Y L G
Sbjct: 463 --DVVSYNTLFTAFAANG 478
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 257 LHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL 316
+H+ C+ ++ A + ++ G ++V++ +ISGY +IG + +L + + ++
Sbjct: 308 MHAKCR--DIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR-- 360
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG-VFPDNVVYTTLISGFCKSGNVSAAH 375
N +N++I NG+ A +M +G PD V +++S ++
Sbjct: 361 --NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
+ D +++ +I + Y S++ + G + EA ++F EM E D V+Y L
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK----ERDVVSYNTLFTAF 474
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD-----GLCKRG 474
G+ E ++ ++M +G+ P+ VTYT ++ GL K G
Sbjct: 475 AANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEG 518
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 107/210 (50%)
Query: 230 GKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYG 289
G A++V+ + ++Y I +++ C+L K +A L +M G VV+Y
Sbjct: 368 GFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYS 427
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
I+ Y + +L ++LM +++++G +PN ++YN++ID+ + ++ AE++ +EM +
Sbjct: 428 NIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRA 487
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
V PD V YT++IS + +S + +L+ E + + D M+ K ++ E
Sbjct: 488 KVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDEL 547
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
+L +M V G D Y++ + AG
Sbjct: 548 MRLLQDMKVEGTRLDARLYSSALNALRDAG 577
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 94/189 (49%)
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
V+Y + I+ YC++ + K L +E+ +KG Y+NI+D+ K + +A R++ +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M + G P+ +Y +LI ++ ++ A K++ EMK+ K++PD VSYTSM+ + +
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
+ +L+ E + + D ++ K + E + M +G + Y+
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSS 568
Query: 466 LVDGLCKRG 474
++ L G
Sbjct: 569 ALNALRDAG 577
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%), Gaps = 18/245 (7%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV-------KEA--HNLLMQMEFCGNVPD 284
A+ V E + G+ ++ Y++++ + + +V KEA LL E C V
Sbjct: 267 ALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKV-- 324
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
+ Y + G +E L+++ +++ L+ + + I++ K EA +V
Sbjct: 325 -------VLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYE 377
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
K V Y I+ +C+ + A LFDEM +K V+Y++++ K
Sbjct: 378 WAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTR 437
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
++ +A +L ++M G +P+ Y +LI H +A ++R A I +M + + P+ V+YT
Sbjct: 438 RLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYT 497
Query: 465 ILVDG 469
++
Sbjct: 498 SMISA 502
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 112/240 (46%), Gaps = 4/240 (1%)
Query: 233 RAIRVFREYPEVGVSW----NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
+ + +F+E+ +S+ + Y IV SL + G+ EA +L +M+ G Y
Sbjct: 227 KVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELY 286
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
++I + + ++ KL +E K L + + ++ + + G + V+ M K
Sbjct: 287 SMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRK 346
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
+ + + +++GF K + A K+++ +++ V+Y ++ C++ K +
Sbjct: 347 AELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNK 406
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
A LF EM+ G + V Y+ ++ + K + +A + +M Q+G PN+ Y L+D
Sbjct: 407 AEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLID 466
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 13/253 (5%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
L G +G++ + + +E +V N ++N ++ Q GK+ EA NL +M
Sbjct: 319 LAGYVQGER--MEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP----KR 372
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
D VS+ +I+GY Q G + L+L +++R+G R N +++ + C + +E + L
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALS-TCADVVALELGKQL 431
Query: 344 R-EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
+ K G V L+ +CK G++ A+ LF EM K D VS+ +M+ G +
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSR 487
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVV 461
G A + F M GL+PD+ T A++ G + + M Q G+ PN
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 547
Query: 462 TYTILVDGLCKRG 474
Y +VD L + G
Sbjct: 548 HYACMVDLLGRAG 560
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 110/218 (50%), Gaps = 20/218 (9%)
Query: 247 SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK 306
+W +S+N +L + K+ EA M NV DVVS+ II+GY Q G++++ +
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSM----NVRDVVSWNTIITGYAQSGKIDEARQ 271
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
L +E + + + + ++ +N V EA + +M + + V + +++G+
Sbjct: 272 LFDESPVQDV----FTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYV 323
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
+ + A +LFD M + + ++ +M+ G + GK+ EA LF +M + D V
Sbjct: 324 QGERMEMAKELFDVMPCRNV----STWNTMITGYAQCGKISEAKNLFDKM----PKRDPV 375
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
++ A+I G+ ++G EA + QM ++G N +++
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 28/236 (11%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+RVF+ P W+++SYN ++ + G+ + A L +M D+VS+ V+I
Sbjct: 83 ALRVFKRMPR----WSSVSYNGMISGYLRNGEFELARKLFDEMP----ERDLVSWNVMIK 134
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
GY + L K +L E + + + +N ++ +NG V +A V M +
Sbjct: 135 GYVRNRNLGKARELFEIMPERDV----CSWNTMLSGYAQNGCVDDARSVFDRMPE----K 186
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
++V + L+S + ++ + A LF + + VS+ +L G K K+VEA + F
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFF 242
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
M V D V++ +I G+ ++G++ EA Q+ + +V T+T +V G
Sbjct: 243 DSMNV----RDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAMVSG 290
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N +L C+ G ++EA++L +M D+VS+ +I+GY + G E L+ E ++R
Sbjct: 448 NALLLMYCKCGSIEEANDLFKEMAG----KDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK-HGVFPDNVVYTTLISGFCKSGNVS 372
+GL+P++ ++ G V + + MT+ +GV P++ Y ++ ++G +
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSML-----HGLCKIGKMVEAHKLFSEMLVMGLEPDEV- 426
AH L MK PD + ++L HG ++ + A K+F+ +EP+
Sbjct: 564 DAHNL---MKNMPFEPDAAIWGTLLGASRVHGNTELAETA-ADKIFA------MEPENSG 613
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
Y L + +G + + +M KG+
Sbjct: 614 MYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
+N I + G EA RV + M + +V Y +ISG+ ++G A KLFDEM
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMR 442
++ D VS+ M+ G + + +A +LF M E D ++ ++ G+ + G +
Sbjct: 123 ER----DLVSWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVD 174
Query: 443 EAFSIHNQMVQKGLTPNVVTYTILV 467
+A S+ ++M +K N V++ L+
Sbjct: 175 DARSVFDRMPEK----NDVSWNALL 195
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 20/219 (9%)
Query: 271 NLLMQM-EFCGNV------------PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLR 317
N +M+M CGN+ D++S+ II GYCQ G E+ K +++ G +
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTK 408
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTK-HGVFPDNVVYTTLISGFCKSGNVSAAHK 376
P ++ +++ + N V+E R + + G+ ++ V ++LI+ + K G++ A
Sbjct: 409 PTDFALASLLSV-SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASM 467
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHC 436
+F E + D VS T+M++G + GK EA LF + L +G PD VT+ +++
Sbjct: 468 IFGETDR----DDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACT 523
Query: 437 KAGEMREAFSIHNQMVQK-GLTPNVVTYTILVDGLCKRG 474
+G++ F N M + + P Y +VD LC+ G
Sbjct: 524 HSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAG 562
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ N+ + +++ + G +KEA + + + D+VS +I+GY + G+ ++
Sbjct: 441 GLEQNSTVRSSLINMYSKCGSIKEASMIFGETDR----DDIVSLTAMINGYAEHGKSKEA 496
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK-HGVFPDNVVYTTLIS 363
+ L E+ + G RP+ + +++ +G++ M + + + P Y ++
Sbjct: 497 IDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVD 556
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEP 423
C++G +S A K+ +EM KK D V +T++L CK +E + +E + LE
Sbjct: 557 LLCRAGRLSDAEKMINEMSWKK---DDVVWTTLLIA-CKAKGDIERGRRAAERI---LEL 609
Query: 424 DEVTYTALIYG---HCKAGEMREAFSIHNQMVQKGL 456
D TAL+ + G + EA ++ M KG+
Sbjct: 610 DPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 645
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
DVVS+ +I Y +IGQ K ++ +++ + PNE + ++ +V E++
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+ G+ V +++ + GN+ +A LF M+ + D +S+++++ G C+
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR----DIISWSTIIGGYCQA 389
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
G E K FS M G +P + +L+ + +H + GL N
Sbjct: 390 GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR 449
Query: 464 TILVDGLCKRG 474
+ L++ K G
Sbjct: 450 SSLINMYSKCG 460
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CG+ K A +F E + +S +++ + GK KEA +L + G PD
Sbjct: 459 CGSI---KEASMIFGETDRDDI----VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPD 511
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
V++ +++ GQL+ +Q +RP + Y ++DLLC+ G + +AE+++
Sbjct: 512 SVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMI 571
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNV 371
EM+ D+VV+TTL+ G++
Sbjct: 572 NEMSWK---KDDVVWTTLLIACKAKGDI 596
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 112/252 (44%), Gaps = 13/252 (5%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
+CG+ A RVF N + +N ++ +G E+ + M+ G
Sbjct: 45 ICGSLSNSDYANRVFSHIQNP----NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWA 100
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
D +Y ++ + L + EL R G + +++L G + +A++V
Sbjct: 101 DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVF 160
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
EM++ V VV+ +I GFC SG+V LF +M ++ IV S+ SM+ L K
Sbjct: 161 DEMSERNV----VVWNLMIRGFCDSGDVERGLHLFKQMSERSIV----SWNSMISSLSKC 212
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
G+ EA +LF EM+ G +PDE T ++ G + IH+ GL + +T
Sbjct: 213 GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV 272
Query: 464 -TILVDGLCKRG 474
LVD CK G
Sbjct: 273 GNALVDFYCKSG 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 15/244 (6%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +VF E E N + +N+++ C G V+ +L QM + +VS+ +IS
Sbjct: 156 AQKVFDEMSER----NVVVWNLMIRGFCDSGDVERGLHLFKQM----SERSIVSWNSMIS 207
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
+ G+ + L+L E+ +G P+E ++ + G + + + G+F
Sbjct: 208 SLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFK 267
Query: 354 DNV-VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
D + V L+ +CKSG++ AA +F +M+++ + VS+ +++ G GK L
Sbjct: 268 DFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV----VSWNTLISGSAVNGKGEFGIDL 323
Query: 413 FSEMLVMG-LEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYTILVDGL 470
F M+ G + P+E T+ ++ G++ + M+++ L Y +VD +
Sbjct: 324 FDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLM 383
Query: 471 CKRG 474
+ G
Sbjct: 384 SRSG 387
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 123/243 (50%), Gaps = 11/243 (4%)
Query: 233 RAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVII 292
+A +F + PE NT+S++ ++ + G ++ A + +M +VV++ +II
Sbjct: 234 KAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK--NVVTWTIII 287
Query: 293 SGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
+GY + G L++ +L++++ GL+ + +I+ ++G + R+ + + +
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 353 PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKL 412
+ V L+ + K GN+ A +F+++ +K D VS+ +MLHGL G EA +L
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIEL 403
Query: 413 FSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ-KGLTPNVVTYTILVDGLC 471
FS M G+ PD+VT+ A++ AG + E M + L P V Y LVD L
Sbjct: 404 FSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLG 463
Query: 472 KRG 474
+ G
Sbjct: 464 RVG 466
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 126/244 (51%), Gaps = 22/244 (9%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+RVF + E N N ++ + Q + +A + +M+ G D +Y ++
Sbjct: 70 AVRVFNQVQEP----NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLK 125
Query: 294 GYCQIGQLEKVLKLMEE-LQRKGLRPNEYVYNNIIDLLCKNGE--VVEAERVLREMTKHG 350
C V+K+M +++ GL + YV N +ID + G V +A ++ +M++
Sbjct: 126 A-CSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER- 183
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
D V + +++ G K+G + A +LFDEM Q+ D +S+ +ML G + +M +A
Sbjct: 184 ---DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAF 236
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+LF +M E + V+++ ++ G+ KAG+M A + ++M NVVT+TI++ G
Sbjct: 237 ELFEKM----PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGY 290
Query: 471 CKRG 474
++G
Sbjct: 291 AEKG 294
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 112/234 (47%), Gaps = 3/234 (1%)
Query: 236 RVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGY 295
+V E GV + ++N ++H + L M G P+ S + S
Sbjct: 930 KVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSL 989
Query: 296 CQIGQLEKVLKLMEELQRKGLR-PNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPD 354
C G ++K L L + ++ KG + V I++ L GE+ +AE L +T++G+
Sbjct: 990 CDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP 1049
Query: 355 NVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
N Y +I GN+ A L + M + + +P SY S+++GL + ++ +A +
Sbjct: 1050 N--YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHT 1107
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
EM+ +GL P T++ L++ C+A ++ E+ + MV G +P+ + ++D
Sbjct: 1108 EMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVID 1161
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 107/249 (42%), Gaps = 6/249 (2%)
Query: 211 VVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTM---SYNIVLHSLCQLGKVK 267
+V + SC L + A R+ ++ E N M S V+ LC KV+
Sbjct: 214 LVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQ 273
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
EA L ++ G + + Y I GY + E +L + E++ + P+ +V N I+
Sbjct: 274 EARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYE---PDVFVGNRIL 330
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
LC+ A + E+ G D V + LI C G++ A E+ K
Sbjct: 331 HSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYK 390
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
PD SY ++L GL + G H + EM G+ T+ ++ G+CKA + EA I
Sbjct: 391 PDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRI 450
Query: 448 HNQMVQKGL 456
N+M GL
Sbjct: 451 VNKMFGYGL 459
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 46/261 (17%)
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV---IISGYCQIGQLEKVLKLMEEL 311
I+ L + G VKE LLM+ME G+ +V+ G+ +I Y K + L + +
Sbjct: 152 IMASMLIREGMVKEVELLLMEMERHGDT--MVNEGIFCDLIGKYVDDFDSRKAVMLFDWM 209
Query: 312 QRKGLRPNEYVYNNIID--------------------------------------LLCKN 333
+RKGL P Y +ID LLC +
Sbjct: 210 RRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLD 269
Query: 334 GEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSY 393
+V EA + R++ G ++ +Y+ + G+ + + E+K + PD
Sbjct: 270 QKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYE---PDVFVG 326
Query: 394 TSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
+LH LC+ A+ E+ +G + DEVT+ LI C G+++ A ++++
Sbjct: 327 NRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMS 386
Query: 454 KGLTPNVVTYTILVDGLCKRG 474
KG P+V +Y ++ GL ++G
Sbjct: 387 KGYKPDVYSYNAILSGLFRKG 407
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 42/258 (16%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQ 312
YN ++ LC K A +L +M ++P + S ++I C+ + L E++
Sbjct: 742 YNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQID 801
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+ YV+ +I L G++++AE LR M +G+ N +Y + G+CK N
Sbjct: 802 ------SSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWM 855
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLC------------------------------- 401
++ M +K I+ SY + +C
Sbjct: 856 KVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNML 915
Query: 402 -----KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGL 456
+ +E +K+ EM G+ PDE T+ L++G+ + + + + M+ KG+
Sbjct: 916 IFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGM 975
Query: 457 TPNVVTYTILVDGLCKRG 474
PN + + LC G
Sbjct: 976 KPNNRSLRAVTSSLCDNG 993
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 119/304 (39%), Gaps = 41/304 (13%)
Query: 204 KLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQL 263
++ +G +S S + + LC + + +I + ++P++ + + N ++ C+
Sbjct: 553 EMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKK 612
Query: 264 GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVY 323
G + + + +M + D V+Y +I +C+ L +L + Q P+
Sbjct: 613 GFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDC 672
Query: 324 NNIIDLLCKNG---EVVE--------------------------------AERVLREMTK 348
++ + L + G EVV+ A V++ +
Sbjct: 673 GDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEG 732
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
G + VY LI G C SAA + DEM KK +P S ++ LC+ K
Sbjct: 733 EGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGT 792
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
A L ++ + ALI G AG+M +A + M+ GL+ Y ++
Sbjct: 793 AFNLAEQI------DSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQ 846
Query: 469 GLCK 472
G CK
Sbjct: 847 GYCK 850
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 252 SYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEEL 311
+Y+ ++ L G + A +LL M ++P SY +I+G + QL+K + E+
Sbjct: 1050 NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEM 1109
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
GL P+ ++ ++ C+ +V+E+ER+++ M G P ++ T+I F N
Sbjct: 1110 VELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNT 1169
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGL--CKIGKMVEAHKLFSEMLVMG 420
A ++ + M++ DF ++ S++ + K K A + F L+ G
Sbjct: 1170 VKASEMMEMMQKCGYEVDFETHWSLISNMSSSKEKKTTTAGEGFLSRLLSG 1220
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 38/291 (13%)
Query: 218 NLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQME 277
N L LC F G +RA E +G + +++ I++ C G +K A L ++
Sbjct: 327 NRILHSLCRRF-GSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIM 385
Query: 278 FCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVV 337
G PDV SY I+SG + G + +++E++ G+ + + ++ CK +
Sbjct: 386 SKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFE 445
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFC-----------KSGNVSAAHK--LFDEMKQ- 383
EA+R++ +M +G+ + V L F K N S K FD++
Sbjct: 446 EAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNG 505
Query: 384 -------------------KKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+ ++P+F S++ + G + A +L EM G +
Sbjct: 506 LYLHTDLDAYEQRVNMVLDRSVLPEF---NSLIVRASEDGDLQTALRLLDEMARWGQKLS 562
Query: 425 EVTYTALIYGHCKA-GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ L+ C + +R + S+ + + + T LV CK+G
Sbjct: 563 RRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKG 613
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 121/251 (48%), Gaps = 13/251 (5%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CGN K+ + + G+ N + + +L + G V+EA + M + +
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM----SKKN 330
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
VS+ ++ GYCQ G+ EK +++ E++ K L Y + ++ V + +
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHG 386
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
+ + G F + +V + LI + KSG + +A +++ +M + + +++ +ML L + G
Sbjct: 387 QYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS----IRNMITWNAMLSALAQNG 442
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVTY 463
+ EA F++M+ G++PD +++ A++ G + E + M + G+ P Y
Sbjct: 443 RGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY 502
Query: 464 TILVDGLCKRG 474
+ ++D L + G
Sbjct: 503 SCMIDLLGRAG 513
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 44/229 (19%)
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV----- 336
V D +S+ ++SGY + K L++ E+ GL NE+ ++ + + GEV
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 337 ------------------------------VEAERVLREMTKHGVFPDNVVYTTLISGFC 366
V+A RV EM + PD + +T ++S F
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE----PDVICWTAVLSAFS 240
Query: 367 KSGNVSAAHKLFDEM-KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
K+ A LF M + K +VPD ++ ++L + ++ + ++ +++ G+ +
Sbjct: 241 KNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNV 300
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
V ++L+ + K G +REA + N M +K N V+++ L+ G C+ G
Sbjct: 301 VVESSLLDMYGKCGSVREARQVFNGMSKK----NSVSWSALLGGYCQNG 345
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Query: 296 CQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDN 355
C++GQL + ++++ + +Y +++ K + + + K G+ D
Sbjct: 37 CKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDR 96
Query: 356 VVYTTLISGFCKSG-NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFS 414
V +L+S + K G + ++FD + V D +S+TSM+ G + V+A ++F
Sbjct: 97 NVGNSLLSLYFKLGPGMRETRRVFD----GRFVKDAISWTSMMSGYVTGKEHVKALEVFV 152
Query: 415 EMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
EM+ GL+ +E T ++ + + GE+R H ++ G N
Sbjct: 153 EMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWN 197
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
+++ + ++M + G+ P+ V ++ G CK G V A KLF M+ K +P+ V YT+++
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
CK K+ +A ++F +M G+ P+ +Y L+ G + +A + ++M++ G +
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 458 PNVVTYTILVDGLCK 472
PNV T+ LVD LC+
Sbjct: 234 PNVPTFVELVDALCR 248
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
Query: 302 EKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTL 361
E ++ ++++ GL PN ++D LCK+G V EA ++ M G P+ V+YT +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
+ FCK+ + A ++F +M+ I P+ SY ++ GL + +A SEML G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
P+ T+ L+ C+ + +A S + + QKG NV +D
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F++ E G+ N ++ +L LC+ G V+EA L M G +P+VV Y ++ +C
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ ++E ++ ++Q G+ PN + Y ++ L + +A EM + G P+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+ L+ C+ V A D + QK
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQK 265
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
L +++ + +M+ G +P+ V+ ++ G C+ G +++ +KL ++ KG P +
Sbjct: 112 LPPPEDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVI 168
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y +++ CK ++ +A+R+ R+M +G+ P+ Y L+ G + A EM
Sbjct: 169 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 228
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ P+ ++ ++ LC++ + +A
Sbjct: 229 ESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 57/119 (47%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+++F + G + Y V+ + C+ K+++A + +M+ G P+ SYGV+
Sbjct: 148 QEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVL 207
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+ G L+ + E+ G PN + ++D LC+ V +A+ + + + G
Sbjct: 208 VQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 338 EAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSML 397
+++ + ++M + G+ P+ V ++ G CK G V A KLF M+ K +P+ V YT+++
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 398 HGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT 457
CK K+ +A ++F +M G+ P+ +Y L+ G + +A + ++M++ G +
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 458 PNVVTYTILVDGLCK 472
PNV T+ LVD LC+
Sbjct: 234 PNVPTFVELVDALCR 248
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
Query: 302 EKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTL 361
E ++ ++++ GL PN ++D LCK+G V EA ++ M G P+ V+YT +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
+ FCK+ + A ++F +M+ I P+ SY ++ GL + +A SEML G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
P+ T+ L+ C+ + +A S + + QKG NV +D
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
+F++ E G+ N ++ +L LC+ G V+EA L M G +P+VV Y ++ +C
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
+ ++E ++ ++Q G+ PN + Y ++ L + +A EM + G P+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQK 384
+ L+ C+ V A D + QK
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQK 265
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
L +++ + +M+ G +P+ V+ ++ G C+ G +++ +KL ++ KG P +
Sbjct: 112 LPPPEDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVI 168
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
Y +++ CK ++ +A+R+ R+M +G+ P+ Y L+ G + A EM
Sbjct: 169 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 228
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ P+ ++ ++ LC++ + +A
Sbjct: 229 ESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 57/119 (47%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
+ A+++F + G + Y V+ + C+ K+++A + +M+ G P+ SYGV+
Sbjct: 148 QEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVL 207
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+ G L+ + E+ G PN + ++D LC+ V +A+ + + + G
Sbjct: 208 VQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 8/240 (3%)
Query: 233 RAIRVFREYPEVGVSW--NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
R +R F + ++ +S+ + + Y IVL Q+GK+K A ++M G PD V+ G
Sbjct: 169 RQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGT 228
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK---NGEVVEAERVLREMT 347
++ Y + G+ +L + +Q + + + VYN ++ L K +G+V++ + EM
Sbjct: 229 MLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVID---LWLEMV 285
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
+ GV P+ YT ++S + K G A K F EMK VP+ V+Y+S++ K G
Sbjct: 286 EEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWE 345
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+A L+ +M G+ P T ++ + K +A S+ M + + + V +++
Sbjct: 346 KAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLII 405
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 5/273 (1%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFE-GKKRAIRVF-REYPEVGVSWNTMSYNIVLHS 259
F ++L G +C T LC G+ A+ F + E + +T YN +L S
Sbjct: 211 FLEMLEVGCEPDAVACG---TMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSS 267
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
L + + +L ++M G P+ +Y +++S Y + G E+ LK E++ G P
Sbjct: 268 LQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPE 327
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
E Y+++I L K G+ +A + +M G+ P N T++S + K+ N A LF
Sbjct: 328 EVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFA 387
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
+M++ KI D V ++ K+G +A +F E + L DE TY A+ H +G
Sbjct: 388 DMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSG 447
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
+ +A + M + + + Y +++ K
Sbjct: 448 NVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAK 480
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%)
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+I Y + G LE L E KG P + +++ L G+ EAE + R +
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKN 769
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ D V Y TLI ++G + A ++++ M + +Y +M+ + ++ +A
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
++FS GL DE YT +I + K G+M EA S+ ++M +KG+ P +Y ++V
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 36/275 (13%)
Query: 230 GKKR-AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
GK R A + R E + +T+ YN ++ ++ + GK++ A + +M G + +Y
Sbjct: 753 GKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTY 812
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
+IS Y + QL+K +++ +R GL +E +Y N+I K G++ EA + EM K
Sbjct: 813 NTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQK 872
Query: 349 HGVFP-----------------------------------DNVVYTTLISGFCKSGNVSA 373
G+ P D Y TLI + +S +
Sbjct: 873 KGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAE 932
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A K +K+K I ++S+L L K G M EA + + +M G+ PD ++
Sbjct: 933 AEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILK 992
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
G+ G+ + + +M++ + + +++ D
Sbjct: 993 GYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVED 1027
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 5/251 (1%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CG E A +F E E G ++ +I++++L GK +EA ++ D
Sbjct: 717 CGWLED---AYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELD 773
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
V Y +I + G+L+ ++ E + G+ + YN +I + + ++ +A +
Sbjct: 774 TVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFS 833
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
+ G++ D +YT +I + K G +S A LF EM++K I P SY M+ +C
Sbjct: 834 NARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATS 892
Query: 405 KMV-EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
++ E +L M G D TY LI + ++ + EA + +KG+ + +
Sbjct: 893 RLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHF 952
Query: 464 TILVDGLCKRG 474
+ L+ L K G
Sbjct: 953 SSLLSALVKAG 963
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
RP+ VY ++ L + G++ AE EM + G PD V T++ + + G SA
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 377 LFDEMKQKKIVPDFVSYTSMLHGLCKI---GKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
+ +++++I+ Y ML L K GK+++ L+ EM+ G+ P+E TYT ++
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVID---LWLEMVEEGVPPNEFTYTLVVS 301
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ K G EA +M G P VTY+ ++ K G
Sbjct: 302 SYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAG 342
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 94/212 (44%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
++ + + G +++A+ L M+ G P V+ ++++ G+ + + K
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKN 769
Query: 316 LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAH 375
+ + YN +I + + G++ A + M GV Y T+IS + + + A
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
++F ++ + D YT+M+ K GKM EA LFSEM G++P +Y ++
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKIC 889
Query: 436 CKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+ E + M + G ++ TY L+
Sbjct: 890 ATSRLHHEVDELLQAMERNGRCTDLSTYLTLI 921
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+IS + + G + K + + + R GLR E +I + + ++ EA+R+ +
Sbjct: 641 VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK 700
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
P V ++I + + G + A+ LF E +K P V+ + +++ L GK EA
Sbjct: 701 T-PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAE 759
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+ L +E D V Y LI +AG+++ A I+ +M G+ ++ TY ++
Sbjct: 760 HISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI 816
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 20/228 (8%)
Query: 253 YNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD---VVSYGVIISGYCQIGQLEKVLKLME 309
Y + C+ G V EA +L+++M V D V + + + + E VL + +
Sbjct: 540 YKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQ 599
Query: 310 -ELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
++ GL +++L K G + E + +L M K + V +IS F +
Sbjct: 600 LDVMALGL---------MLNLRLKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVRE 648
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE--PDEV 426
G+VS A + D + + + + + +++ + K+ EA +L+ L G P +
Sbjct: 649 GDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY---LAAGESKTPGKS 705
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++I + + G + +A+ + + +KG P VT +ILV+ L RG
Sbjct: 706 VIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRG 753
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 154/387 (39%), Gaps = 61/387 (15%)
Query: 118 RDKPSLEALCIVLHIAVASNDLKMAQTLVFEFWATPRLDVHHLFDQFTERLIYTYKDW-- 175
RD S A+ I LH+ V DL MAQ F+Q ER I T+
Sbjct: 210 RDISSWNAM-IALHMQVGQMDLAMAQ-----------------FEQMAERDIVTWNSMIS 251
Query: 176 -----GAHPLVFDVFFQXXX---------XXXXXXXXXXXFHKLL------SYGIVVSVD 215
G D+F + KL S+ + D
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 216 SCNLFLTRL------CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEA 269
+ L L CG E +R I R ++ + + +L +LG + +A
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQ-RGTKDLKIE----GFTALLDGYIKLGDMNQA 366
Query: 270 HNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDL 329
N+ + ++ DVV++ +I GY Q G + + L + G RPN Y ++ +
Sbjct: 367 KNIFVSLK----DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 330 LCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
+ +++ K G V LI+ + K+GN+++A + FD ++ ++ D
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER---D 479
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
VS+TSM+ L + G EA +LF ML+ GL PD +TY + AG + + +
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 450 QM--VQKGLTPNVVTYTILVDGLCKRG 474
M V K + P + Y +VD + G
Sbjct: 540 MMKDVDK-IIPTLSHYACMVDLFGRAG 565
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 23/233 (9%)
Query: 234 AIRVFREYP-EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP--DVVSYGV 290
A ++F E P SWNT VL + + G + EF +P D VS+
Sbjct: 68 ARKLFDEMPLRTAFSWNT-----VLSAYSKRGDMDST------CEFFDQLPQRDSVSWTT 116
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+I GY IGQ K +++M ++ ++G+ P ++ N++ + + ++V + K G
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG 176
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
+ + V +L++ + K G+ A +FD M +V D S+ +M+ ++G+M A
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM----VVRDISSWNAMIALHMQVGQMDLAM 232
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG-LTPNVVT 462
F +M E D VT+ ++I G + G A I ++M++ L+P+ T
Sbjct: 233 AQFEQM----AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
+ GL + Y+ NN++++ K G + A ++ EM F + T++S + K G++
Sbjct: 42 KSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFS----WNTVLSAYSKRGDMD 97
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
+ + FD++ Q+ D VS+T+M+ G IG+ +A ++ +M+ G+EP + T T ++
Sbjct: 98 STCEFFDQLPQR----DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
M +H+ +V+ GL NV L++ K G
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
D VS+ +I Q G E+ L+L E + +GLRP+ Y + C + +V R
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA-CTHAGLVNQGRQY 537
Query: 344 REMTKH--GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
+M K + P Y ++ F ++G + A + ++M I PD V++ S+L C
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP---IEPDVVTWGSLLSA-C 593
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEV-TYTALIYGHCKAGEMREAFSIHNQM 451
++ K ++ K+ +E L++ LEP+ Y+AL + G+ EA I M
Sbjct: 594 RVHKNIDLGKVAAERLLL-LEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 114/238 (47%), Gaps = 3/238 (1%)
Query: 238 FREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQ 297
F + PE S ++Y +L+ C+ ++A LL +M+ P +SY +++ Y +
Sbjct: 113 FVDLPET--SKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTK 170
Query: 298 IGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG-VFPDNV 356
G+ EKV +++EL+ + + P+ Y YN + L ++ ERV+ EM + G V PD
Sbjct: 171 TGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWT 230
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM 416
Y+ + S + +G A K E++ K DF +Y ++ ++GK+ E ++++ +
Sbjct: 231 TYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSL 290
Query: 417 LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + V Y +I K ++ A ++ + T ++ +L+ + G
Sbjct: 291 RLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEG 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
++A + + E+ ++ ++MSYN ++ + G+ ++ ++ +++ +PD +Y V
Sbjct: 140 EKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVW 199
Query: 292 ISGYCQIGQLEKVLKLMEELQRKG-LRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+ + V +++EE+ R G + P+ Y+N+ + G +AE+ L+E+
Sbjct: 200 MRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKN 259
Query: 351 VFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAH 410
D Y LI+ + + G ++ ++++ ++ V+Y +M+ L K+ + A
Sbjct: 260 TQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAE 319
Query: 411 KLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
LF E D LI + + G +++A + + ++G N T+ I +D
Sbjct: 320 TLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYY 379
Query: 471 CKRG 474
K G
Sbjct: 380 VKSG 383
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 287 SYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREM 346
S+ +ISGY Q G E + L E+Q+ PN I+ + G + + V ++
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV-HDL 445
Query: 347 TKHGVFPDNV-VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
+ F ++ V T LI + K G+++ A +LFD M +K + V++ +M+ G G+
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK----NEVTWNTMISGYGLHGQ 501
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYT 464
EA +F EML G+ P VT+ ++Y AG ++E I N M+ + G P+V Y
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 465 ILVDGLCKRG 474
+VD L + G
Sbjct: 562 CMVDILGRAG 571
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 13/220 (5%)
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
I L+S C GK+K L + PD+V+Y +I GY G+ E L L +EL
Sbjct: 263 ISLYSKC--GKIKMGSALFREFR----KPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
G R + ++ L+ +G ++ + K V T L + + K + +A
Sbjct: 317 GARLRS---STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
KLFDE +K + S+ +M+ G + G +A LF EM P+ VT T ++
Sbjct: 374 RKLFDESPEKSL----PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 435 HCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ G + +H+ + ++ T L+ K G
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 105/241 (43%), Gaps = 10/241 (4%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
+I+VFR+ + S + +L L + +++E L MQ+ S+ +++
Sbjct: 204 SIQVFRDL--INESCTRLDTTTLLDILPAVAELQEL-RLGMQIHSLATKTGCYSHDYVLT 260
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
G+ + +K+ L R+ +P+ YN +I NGE + + +E+ G
Sbjct: 261 GFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA-- 318
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ +TL+S SG++ + + + + T++ K+ ++ A KLF
Sbjct: 319 -RLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKR 473
E E ++ A+I G+ + G +A S+ +M + +PN VT T ++ +
Sbjct: 378 DE----SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 474 G 474
G
Sbjct: 434 G 434
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 225 CGNFEGKKRAIRVFREYPEVGV-SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
CG+ E +A F+ P GV +W M + + KV+ A + M N+
Sbjct: 199 CGDLE---KASHFFKVAPVRGVVAWTAM-----ITGYMKAKKVELAEAMFKDMTVNKNL- 249
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
V++ +ISGY + + E LKL + +G+RPN ++ + L C ++ R +
Sbjct: 250 --VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL-LGCSELSALQLGRQI 306
Query: 344 REM-TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
++ +K + D T+LIS +CK G + A KLF+ MK+K D V++ +M+ G +
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQ 362
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVV 461
G +A LF EM+ + PD +T+ A++ AG + + MV+ + P
Sbjct: 363 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD 422
Query: 462 TYTILVDGLCKRG 474
YT +VD L + G
Sbjct: 423 HYTCMVDLLGRAG 435
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 58/276 (21%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A ++F E PE +T SYNI+L + ++A + +M F D S+ +I+
Sbjct: 112 AHQLFDEIPEP----DTFSYNIMLSCYVRNVNFEKAQSFFDRMPF----KDAASWNTMIT 163
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
GY + G++EK +L + K NE +N +I + G++ +A + GV
Sbjct: 164 GYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGV-- 217
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
V +T +I+G+ K+ V A +F +M K + V++ +M+ G + + + KLF
Sbjct: 218 --VAWTAMITGYMKAKKVELAEAMFKDMTVNK---NLVTWNAMISGYVENSRPEDGLKLF 272
Query: 414 SEMLVMGLEP-----------------------------------DEVTYTALIYGHCKA 438
ML G+ P D T+LI +CK
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKC 332
Query: 439 GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
GE+ +A+ + M +K +VV + ++ G + G
Sbjct: 333 GELGDAWKLFEVMKKK----DVVAWNAMISGYAQHG 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 226 GNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ-LGKVKEAHNLLMQMEFCGNVPD 284
G+ +G A+RVF + NT+++N +L + + ++ EAH L ++ PD
Sbjct: 75 GDIDG---ALRVFHGMR----AKNTITWNSLLIGISKDPSRMMEAHQLFDEIP----EPD 123
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
SY +++S Y + EK + + K + +N +I + GE+ +A +
Sbjct: 124 TFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARELFY 179
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVP--DFVSYTSMLHGLCK 402
M + + V + +ISG+ + G++ A F K+ P V++T+M+ G K
Sbjct: 180 SMME----KNEVSWNAMISGYIECGDLEKASHFF------KVAPVRGVVAWTAMITGYMK 229
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPN 459
K+ A +F +M V + VT+ A+I G+ + + + M+++G+ PN
Sbjct: 230 AKKVELAEAMFKDMTV---NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKN-GEVVEAERVLREMTKH 349
II+ + G ++ L++ ++ K N +N+++ + K+ ++EA ++ E+ +
Sbjct: 67 IIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEIPE- 121
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
PD Y ++S + ++ N A FD M K D S+ +M+ G + G+M +A
Sbjct: 122 ---PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKA 174
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
+LF M +E +EV++ A+I G+ + G++ +A +G VV +T ++ G
Sbjct: 175 RELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITG 226
Query: 470 LCK 472
K
Sbjct: 227 YMK 229
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 312 QRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNV 371
Q KG + + + Y ++D+ + G + V M + GV D V YT+LI SG+V
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 372 SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTAL 431
A +L++EM+ P VSYT+ + L G++ EA +++ EML + P+ TYT L
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 432 IYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ G+ EA I +M + G+ P+ IL+ K G
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFG 276
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 5/231 (2%)
Query: 240 EYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIG 299
+ P +GV W++ N VL + + K N Q++ G D +Y ++ + + G
Sbjct: 79 QLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIK--GFKHDHFTYTTMLDIFGEAG 136
Query: 300 QLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYT 359
+++ + + ++ KG+ + Y ++I + +G+V A R+ EM +G P V YT
Sbjct: 137 RIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYT 196
Query: 360 TLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVM 419
+ G V A +++ EM + ++ P+ +YT ++ L GK EA +F +M +
Sbjct: 197 AYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEI 256
Query: 420 GLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
G++PD+ LI K GE + M + G+ V+ Y I V+ L
Sbjct: 257 GVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV---VLRYPIFVEAL 304
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 237 VFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYC 296
VF E GV +T++Y ++H + G V A L +M G P VVSY +
Sbjct: 144 VFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLF 203
Query: 297 QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV 356
G++E+ ++ +E+ R + PN + Y +++ L G+ EA + +M + GV PD
Sbjct: 204 ADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKA 263
Query: 357 VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
LI+ K G S ++ MK+ +V + + L L G+
Sbjct: 264 ACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGE 312
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 286 VSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLRE 345
VS+ +I+G+ + EK L+L + + R G RP+ + Y ++ G + + + V
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 346 MTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGK 405
M K G TL+ + KSG++ A K+FD + ++ D VS+ S+L + G
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGF 343
Query: 406 MVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTI 465
EA F EM +G+ P+E+++ +++ +G + E + + M + G+ P Y
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT 403
Query: 466 LVDGLCKRG 474
+VD L + G
Sbjct: 404 VVDLLGRAG 412
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N +L + G + +A + ++ DVVS+ +++ Y Q G ++ + EE++R
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLA----KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
G+RPNE + +++ +G + E M K G+ P+ Y T++ ++G+++
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A + +EM I P + ++L+ C++ K E +E V L+PD+ ++Y
Sbjct: 417 ALRFIEEM---PIEPTAAIWKALLNA-CRMHKNTELGAYAAEH-VFELDPDDPGPHVILY 471
Query: 434 G-HCKAGEMREAFSIHNQMVQKGL 456
+ G +A + +M + G+
Sbjct: 472 NIYASGGRWNDAARVRKKMKESGV 495
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 96/223 (43%), Gaps = 7/223 (3%)
Query: 247 SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK 306
S N +S+N ++ + ++A L M G P SY + G LE+
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
+ + + G + + N ++D+ K+G + +A ++ + K V V + +L++ +
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV----VSWNSLLTAYA 339
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
+ G A F+EM++ I P+ +S+ S+L G + E + M G+ P+
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAW 399
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
Y ++ +AG++ A +M + P + L++
Sbjct: 400 HYVTVVDLLGRAGDLNRALRFIEEMP---IEPTAAIWKALLNA 439
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 12/223 (5%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N +L+ + G ++EA + +M D V++ +ISGY Q + L ++ R
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMP----QRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNV-VYTTLISGFCKSGNVS 372
G PNE+ +++I ++ K G F NV V + L+ + + G +
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGLMD 213
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A +FD ++ + + VS+ +++ G + +A +LF ML G P +Y +L
Sbjct: 214 DAQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL- 268
Query: 433 YGHCKA-GEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+G C + G + + +H M++ G L+D K G
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 13/144 (9%)
Query: 333 NGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVS 392
G +V A +L+ + +H D V+ TL++ + K G++ A K+F++M Q+ DFV+
Sbjct: 78 QGRIVHAH-ILQSIFRH----DIVMGNTLLNMYAKCGSLEEARKVFEKMPQR----DFVT 128
Query: 393 YTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMRE--AFSIHNQ 450
+T+++ G + + +A F++ML G P+E T +++I A E R +H
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI--KAAAAERRGCCGHQLHGF 186
Query: 451 MVQKGLTPNVVTYTILVDGLCKRG 474
V+ G NV + L+D + G
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYG 210
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 114/223 (51%), Gaps = 8/223 (3%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLC 261
F +++ YG + + N+ L + G + K+ +F GV + +SYN ++ +
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLD-VYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAY- 743
Query: 262 QLGKVKEAHNL---LMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRP 318
GK K+ N+ + M+F G + +Y ++ Y + Q+EK +++ +++ P
Sbjct: 744 --GKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGP 801
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
+ Y YN +I++ + G + E VL+E+ + G+ PD Y TLI + G V A L
Sbjct: 802 DHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLV 861
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
EM+ + I+PD V+YT+++ L + + +EA K M MG+
Sbjct: 862 KEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 11/249 (4%)
Query: 208 YGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVK 267
Y V++ + L L L G FE E G + NT+++N++L + K
Sbjct: 667 YNCVINCCARALPLDELSGTFE----------EMIRYGFTPNTVTFNVLLDVYGKAKLFK 716
Query: 268 EAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNII 327
+ + L + + G V DV+SY II+ Y + + ++ +Q G + YN ++
Sbjct: 717 KVNELFLLAKRHG-VVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLL 775
Query: 328 DLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
D K+ ++ + +L+ M K PD+ Y +I+ + + G + + E+K+ +
Sbjct: 776 DAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLG 835
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSI 447
PD SY +++ G + EA L EM + PD+VTYT L+ + E EA
Sbjct: 836 PDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKW 895
Query: 448 HNQMVQKGL 456
M Q G+
Sbjct: 896 SLWMKQMGI 904
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 1/226 (0%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
G+ WN YN V++ + + E +M G P+ V++ V++ Y + +KV
Sbjct: 659 GIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKV 718
Query: 305 LKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISG 364
+L +R G+ + YN II KN + ++ M G Y TL+
Sbjct: 719 NELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDA 777
Query: 365 FCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPD 424
+ K + + MK+ PD +Y M++ + G + E + E+ GL PD
Sbjct: 778 YGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPD 837
Query: 425 EVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGL 470
+Y LI + G + EA + +M + + P+ VTYT LV L
Sbjct: 838 LCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 122/259 (47%), Gaps = 8/259 (3%)
Query: 220 FLTRLCGNFEGKKRAIRVFRE---YPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLL-MQ 275
+ R+ G E RA + +E + E S+ +N V+++ + G VK A M
Sbjct: 179 LILRVLGRREEWDRAEDLIKELCGFHEFQKSYQV--FNTVIYACTKKGNVKLASKWFHMM 236
Query: 276 MEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGE 335
+EF G P+V + G+++ Y + +E+ +++ G+ E Y+++I + +
Sbjct: 237 LEF-GVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI-VCESAYSSMITIYTRLRL 294
Query: 336 VVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
+AE V+ M + V + +++ + + G + A + M+ P+ ++Y +
Sbjct: 295 YDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNT 354
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
++ G KI KM A LF + +GLEPDE +Y ++I G +A EA + ++ + G
Sbjct: 355 LITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCG 414
Query: 456 LTPNVVTYTILVDGLCKRG 474
PN L++ K G
Sbjct: 415 YKPNSFNLFTLINLQAKYG 433
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N S++ ++ + + G V + LL + ++ + + Y ++I + GQL +K+
Sbjct: 487 NQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIY 546
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
N ++ + +ID+ GE EAE++ + GV D + ++ ++ + K+
Sbjct: 547 NHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKA 606
Query: 369 GNVSAAHKLFDEM-KQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
G++ A + + M +QK IVPD + ML K + L+ + G+ ++
Sbjct: 607 GSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEM 666
Query: 428 YTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
Y +I +A + E +M++ G TPN VT+ +L+D
Sbjct: 667 YNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLD 707
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 70/127 (55%)
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
++L++ Q GK++ A ++L+ ME G P++++Y +I+GY +I ++E L L
Sbjct: 319 VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNI 378
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
GL P+E Y ++I+ + EA+ +E+ + G P++ TLI+ K G+ A
Sbjct: 379 GLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGA 438
Query: 375 HKLFDEM 381
K ++M
Sbjct: 439 IKTIEDM 445
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 1/235 (0%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVI 291
K A + F E GV N + +++ + V+EA M G V + +Y +
Sbjct: 227 KLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSM 285
Query: 292 ISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV 351
I+ Y ++ +K ++++ +++ +R + +++ + G++ AE +L M G
Sbjct: 286 ITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGF 345
Query: 352 FPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHK 411
P+ + Y TLI+G+ K + AA LF + + PD SY SM+ G + EA
Sbjct: 346 SPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKH 405
Query: 412 LFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTIL 466
+ E+ G +P+ LI K G+ A M G + + IL
Sbjct: 406 YYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIIL 460
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 101/250 (40%), Gaps = 41/250 (16%)
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEK---VLKLMEELQRKGLRP- 318
+G+ EA L + ++ G V D + + +++ Y + G LE+ VL++M+E +K + P
Sbjct: 571 MGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE--QKDIVPD 628
Query: 319 ----------------------------------NEYVYNNIIDLLCKNGEVVEAERVLR 344
N+ +YN +I+ + + E
Sbjct: 629 VYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFE 688
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
EM ++G P+ V + L+ + K+ ++LF K+ +V D +SY +++ K
Sbjct: 689 EMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNK 747
Query: 405 KMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYT 464
M G Y L+ + K +M + SI +M + P+ TY
Sbjct: 748 DYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYN 807
Query: 465 ILVDGLCKRG 474
I+++ ++G
Sbjct: 808 IMINIYGEQG 817
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 35/223 (15%)
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEEL-QRKGLRPNEYVYNNIIDLLCKNGEVVEAE 340
V + V+Y +I+ + + ++ L++EL + + V+N +I K G V A
Sbjct: 171 VGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLAS 230
Query: 341 RVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAH------------------------- 375
+ M + GV P+ L+ + K+ NV A
Sbjct: 231 KWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYT 290
Query: 376 --KLFDE-------MKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
+L+D+ MKQ ++ ++ ML+ + GKM A + M G P+ +
Sbjct: 291 RLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNII 350
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
Y LI G+ K +M A + +++ GL P+ +Y +++G
Sbjct: 351 AYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEG 393
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Query: 290 VIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
V+++ Y Q G++E ++ ++ G PN YN +I K ++ A+ + +
Sbjct: 319 VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNI 378
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
G+ PD Y ++I G+ ++ N A + E+K+ P+ + ++++ K G A
Sbjct: 379 GLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGA 438
Query: 410 HKLFSEMLVMGLEPDEVTYTALIYGHCKAGE-------MREAFSIHNQMVQKGLTPNVVT 462
K +M +G + + ++ + K G+ ++ +F H ++ Q + V+
Sbjct: 439 IKTIEDMTGIGCQYSSIL-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMA 497
Query: 463 Y 463
Y
Sbjct: 498 Y 498
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTK 348
G+I+ Y ++G+++ V +++ +R N+ +++++ K+G V + +LRE
Sbjct: 457 GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKW 516
Query: 349 HGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVE 408
++ +Y LI +SG ++ A K+++ + + ++M+ +G+ E
Sbjct: 517 RDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSE 576
Query: 409 AHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM-VQKGLTPNV 460
A KL+ + G+ D + ++ ++ + KAG + EA S+ M QK + P+V
Sbjct: 577 AEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDV 629
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 141/316 (44%), Gaps = 32/316 (10%)
Query: 163 QFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLFLT 222
+F +I Y D G V +VF + + + + +C L L
Sbjct: 140 RFFNSMIMVYSDNGKFSEVVEVF-----------------EYMKNNEVKIDEKTCTLHLL 182
Query: 223 RL--CGNFEGKKRAIRVFREYPEVGVSWNTM-SYNIVLHSLCQLGKVKEAHNLLMQMEFC 279
L C E A F E G+ T+ S +V+ LC G++ A L+ +M
Sbjct: 183 NLKRCDQME---LARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLV 239
Query: 280 GNV-PDVVSYGVIISGYC----QIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNG 334
V ++V++ +I G C +L+ VLKLME ++ + + Y +ID G
Sbjct: 240 KGVKANIVTFKSMI-GCCVKRWDFEELDLVLKLME---KESVMLDLDSYKVLIDGFTSYG 295
Query: 335 EVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYT 394
+V EAER++ M + ++ +Y +++G+ + G V +L+ EM + + P+ +Y
Sbjct: 296 KVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYW 355
Query: 395 SMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK 454
+++GLCK GK+ EA +E+ V E DE Y+ L + G + ++ + +M++
Sbjct: 356 VLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRD 415
Query: 455 GLTPNVVTYTILVDGL 470
G P L D L
Sbjct: 416 GFIPGATICERLADSL 431
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Query: 321 YVYNNIIDLLCKNGEVVEAERVLREM-TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFD 379
Y ++ +LC NGE+ A ++ EM GV + V + ++I K + +
Sbjct: 211 YSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLK 270
Query: 380 EMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAG 439
M+++ ++ D SY ++ G GK+ EA +L M L + Y ++ G+ + G
Sbjct: 271 LMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFG 330
Query: 440 EMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + ++++M +G+TPN TY +L++GLCK G
Sbjct: 331 LVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAG 365
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 21/257 (8%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CG+ + A RVF + S + ++N V+++ + G + +A L +M +
Sbjct: 110 CGDL---RSAQRVFDD----SGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMP----ERN 158
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQ-----RKGLRPNEYVYNNIIDLLCKNGEVVEA 339
V+S+ +I+GY G+ ++ L L E+Q +RPNE+ + ++ + G + +
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG 218
Query: 340 ERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHG 399
+ V + K+ V D V+ T LI + K G++ A ++F+ + KK D +Y++M+
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK---DVKAYSAMICC 275
Query: 400 LCKIGKMVEAHKLFSEMLVM-GLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLT 457
L G E +LFSEM + P+ VT+ ++ G + E S M+++ G+T
Sbjct: 276 LAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGIT 335
Query: 458 PNVVTYTILVDGLCKRG 474
P++ Y +VD + G
Sbjct: 336 PSIQHYGCMVDLYGRSG 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
GL + +V +++++ G++ A+RV + D + ++++ + K+G + A
Sbjct: 92 GLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK----DLPAWNSVVNAYAKAGLIDDA 147
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMG-----LEPDEVTYT 429
KLFDEM ++ + +S++ +++G GK EA LF EM + + P+E T +
Sbjct: 148 RKLFDEMPERNV----ISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
++ + G + + +H + + + ++V T L+D K G
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCG 248
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKG 315
+ +L + G+ EA L Q++ +PDVV++ I+ Y GQ ++ LK+ + G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 316 LRPNEYVYNNIIDLLCKNGEV-VEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
+ PN Y Y+ +I L +G+ +A++ L EM +G+ P+ YT + F + G +A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 375 HKLFDEMKQKKIVPD 389
+L EMK K VPD
Sbjct: 323 RELLQEMKGKGFVPD 337
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 361 LISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMG 420
+ K G A +LF ++K K +PD V++T+++ G+ E K+F ML G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 421 LEPDEVTYTALIYGHCKAGEM-REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ P+ TY+ LI G G+ ++A +M+ G++PN TYT + + + G
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREG 317
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 319 NEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLF 378
NE V + D L K+G EA + ++ PD V +T ++ + +G K+F
Sbjct: 198 NEAV--KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVF 255
Query: 379 DEMKQKKIVPDFVSYTSMLHGLCKIGKM-VEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
M + P+ +Y+ ++ GL GK +A K EM+ G+ P+ TYTA+ +
Sbjct: 256 MRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVR 315
Query: 438 AGEMREAFSIHNQMVQKGLTPN 459
G+ A + +M KG P+
Sbjct: 316 EGKEESARELLQEMKGKGFVPD 337
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHG 350
+ + G+ + L+L +++ K P+ + I++ G+ E +V M G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 351 VFPDNVVYTTLISGFCKSGNV-SAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEA 409
V P+ Y+ LI G G A K EM + P+ +YT++ + GK A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 410 HKLFSEMLVMGLEPDE 425
+L EM G PDE
Sbjct: 323 RELLQEMKGKGFVPDE 338
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A+ +F + + + +++ ++ + G+ KE + M+M G P+ +Y V+I
Sbjct: 216 ALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIK 275
Query: 294 GYCQIGQLEK-VLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVF 352
G G+ K K + E+ G+ PN Y + + + G+ A +L+EM G
Sbjct: 276 GLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFV 335
Query: 353 PD 354
PD
Sbjct: 336 PD 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 232 KRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKV-KEAHNLLMQMEFCGNVPDVVSYGV 290
K ++VF GVS N +Y++++ L GK K+A L++M G P+ +Y
Sbjct: 249 KETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTA 308
Query: 291 IISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEV 336
+ + + G+ E +L++E++ KG P+E ++ K G+V
Sbjct: 309 VFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEY--KRGQV 352
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 10/223 (4%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N +LH G V A+ + +M D+V++ +I+G+ + G+ E+ L L E+
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMP----EKDLVAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
KG++P+ + +++ K G + +RV M K G+ + L+ + + G V
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM-LVMGLEPDEVTYTALI 432
A LFDEM K + VS+TS++ GL G EA +LF M GL P E+T+ ++
Sbjct: 276 AKTLFDEMVDK----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 331
Query: 433 YGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYTILVDGLCKRG 474
Y G ++E F +M ++ + P + + +VD L + G
Sbjct: 332 YACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 10/241 (4%)
Query: 231 KKRAIRVFREYPEVGVSWNTMSYNIVLH--SLCQLGKVKEAHNLLMQMEFCGNVPDVVSY 288
K R I F V +S + +++ + SL + AH + ++E NV +
Sbjct: 32 KLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV---FIW 88
Query: 289 GVIISGYCQIGQLEKVLKLMEELQRKGL-RPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
+I GY +IG L E++ GL P+ + Y +I + +V E + +
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
+ G V +L+ + G+V++A+K+FD+M +K D V++ S+++G + GK
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNSVINGFAENGKPE 204
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
EA L++EM G++PD T +L+ K G + +H M++ GLT N+ + +L+
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264
Query: 468 D 468
D
Sbjct: 265 D 265
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 128/267 (47%), Gaps = 19/267 (7%)
Query: 208 YGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVG-VSWNTMSYNIVLHSLCQLGKV 266
+G ++ V + L L CG+ A +VF + PE V+WN+ V++ + GK
Sbjct: 152 FGSLIYVQNSLLHLYANCGDVAS---AYKVFDKMPEKDLVAWNS-----VINGFAENGKP 203
Query: 267 KEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNI 326
+EA L +M G PD + ++S +IG L ++ + + GL N + N +
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 327 IDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK- 385
+DL + G V EA+ + EM V ++V +T+LI G +G A +LF M+ +
Sbjct: 264 LDLYARCGRVEEAKTLFDEM----VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319
Query: 386 IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML-VMGLEPDEVTYTALIYGHCKAGEMREA 444
++P +++ +L+ G + E + F M +EP + ++ +AG++++A
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379
Query: 445 FSIHNQMVQKGLTPNVVTYTILVDGLC 471
+ M + PNVV + L+ G C
Sbjct: 380 YEYIKSM---PMQPNVVIWRTLL-GAC 402
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 52/286 (18%)
Query: 230 GKKR-AIRVFREYPEVGVSWNTMSYNIVLH---SLCQLGKVKEAHNLLMQMEFCGNV--- 282
G+ R A+++F + GV W++ +++VL SL +L K+ H + ++ V
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 283 -------------------------PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLR 317
P+ VS+ IISGYCQ+ Q E+ +K + L+ K
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 318 P-NEYVYNNIIDLL-----CKNGEVVEAERVLREM--TKHGVFPDNVVYTTLISGFCKSG 369
N + Y +I C G V A+ + R + +++G + LI+ + K G
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG-------ESALITMYSKCG 436
Query: 370 NVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYT 429
+ A+++F+ M PD V++T+ + G G EA +LF +M+ G++P+ VT+
Sbjct: 437 CLDDANEVFESMDN----PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFI 492
Query: 430 ALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYTILVDGLCKRG 474
A++ AG + + + M++K + P + Y ++D + G
Sbjct: 493 AVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSG 538
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 8/215 (3%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N VL C+ +++A L +M + + VS +IS Y + G L+K + L +
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEM----SELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
G +P +Y ++ L + ++ + + G+ + + T +++ + K G +
Sbjct: 178 SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVG 237
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A ++FD+M KK V+ T ++ G + G+ +A KLF +++ G+E D ++ ++
Sbjct: 238 AKRVFDQMAVKKP----VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLK 293
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
E+ IH + + GL V T LVD
Sbjct: 294 ACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 300 QLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGV-FPDNVVY 358
+L + + ++E+ + G+ + Y Y + + C+ + R+L + + G+ P ++
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEA-CRELRSLSHGRLLHDRMRMGIENPSVLLQ 121
Query: 359 TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV 418
++ +C+ ++ A KLFDEM + + VS T+M+ + G + +A LFS ML
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSE----LNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 419 MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G +P YT L+ + IH +++ GL N T +V+ K G
Sbjct: 178 SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLR 344
V G+++ GY Q G+ LKL +L +G+ + +V++ ++ E+ +++
Sbjct: 251 VACTGLMV-GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHA 309
Query: 345 EMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIG 404
+ K G+ + V T L+ + K + +A + F E+++ P+ VS+++++ G C++
Sbjct: 310 CVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE----PNDVSWSAIISGYCQMS 365
Query: 405 KMVEAHKLFSEMLVMGLEP-DEVTYTAL-----IYGHCKAGEMREAFSIHNQMV--QKGL 456
+ EA K F + + TYT++ + C G A +I ++ Q G
Sbjct: 366 QFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE 425
Query: 457 TPNVVTYT 464
+ + Y+
Sbjct: 426 SALITMYS 433
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 23/228 (10%)
Query: 247 SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK 306
S+ M+ +I + LC VK P ++Y + Y ++GQ +
Sbjct: 103 SFPEMAISIFIDMLCSSPSVK---------------PQRLTYPSVFKAYGRLGQARDGRQ 147
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
L + ++GL + ++ N ++ + G ++EA R+ M D V + ++I GF
Sbjct: 148 LHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF----DVVAWNSMIMGFA 203
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
K G + A LFDEM Q+ + VS+ SM+ G + G+ +A +F EM ++PD
Sbjct: 204 KCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
T +L+ G + IH +V+ N + T L+D CK G
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 114/230 (49%), Gaps = 9/230 (3%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
+ ++ +++N ++ + G + +A NL +M + VS+ +ISG+ + G+ + L
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP----QRNGVSWNSMISGFVRNGRFKDAL 243
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
+ E+Q K ++P+ + ++++ G + + + ++ +++V T LI +
Sbjct: 244 DMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMY 303
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
CK G + +F+ +K++ + SM+ GL G A LFSE+ GLEPD
Sbjct: 304 CKCGCIEEGLNVFECAPKKQL----SCWNSMILGLANNGFEERAMDLFSELERSGLEPDS 359
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYTILVDGLCKRG 474
V++ ++ +GE+ A M +K + P++ YT++V+ L G
Sbjct: 360 VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAG 409
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 18/252 (7%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVS-WNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVP 283
CG + K RA VF + V W +M + V G++ EA L + V
Sbjct: 195 CGCLD-KARA--VFDSMRDKNVKCWTSMVFGYV-----STGRIDEARVLFER----SPVK 242
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
DVV + +++GY Q + ++ L+L +Q G+RP+ +V +++ + G + + + +
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
+ ++ V D VV T L+ + K G + A ++F E+K++ D S+TS+++GL
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER----DTASWTSLIYGLAMN 358
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVT 462
G A L+ EM +G+ D +T+ A++ G + E I + M ++ + P
Sbjct: 359 GMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEH 418
Query: 463 YTILVDGLCKRG 474
+ L+D LC+ G
Sbjct: 419 CSCLIDLLCRAG 430
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 45/266 (16%)
Query: 243 EVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLE 302
+ G+ +++ N ++ LGK++ H + +M DVVS+ +IS Y G+ E
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMP----QRDVVSWNGLISSYVGNGRFE 129
Query: 303 KVLKLMEEL-QRKGLRPNEYVYNNIIDLLC-----KNGEVVEAERVLREMTKHGVFPDNV 356
+ + + + Q L+ +E I+ L KN E+ ER+ R + F +V
Sbjct: 130 DAIGVFKRMSQESNLKFDE---GTIVSTLSACSALKNLEI--GERIYRFVVTE--FEMSV 182
Query: 357 -VYTTLISGFCKSGNVSAAHKLFDEMKQKKI---------------------------VP 388
+ L+ FCK G + A +FD M+ K + V
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 389 DFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIH 448
D V +T+M++G + + EA +LF M G+ PD +L+ G + G + + IH
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 449 NQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + +T + V T LVD K G
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCG 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 6/194 (3%)
Query: 282 VPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAER 341
P ++ Y ++ KVL L EL+ +GL P+ + ++ + + +V+E E+
Sbjct: 8 TPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 342 VLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
V K G+ D+ V +L+ + G + HK+FDEM Q+ D VS+ ++
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR----DVVSWNGLISSYV 123
Query: 402 KIGKMVEAHKLFSEM-LVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNV 460
G+ +A +F M L+ DE T + + C A + E + V +V
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSA-CSALKNLEIGERIYRFVVTEFEMSV 182
Query: 461 VTYTILVDGLCKRG 474
LVD CK G
Sbjct: 183 RIGNALVDMFCKCG 196
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 10/223 (4%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
N +LH G V A+ + +M D+V++ +I+G+ + G+ E+ L L E+
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMP----EKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSA 373
KG++P+ + +++ K G + +RV M K G+ + L+ + + G V
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEM-LVMGLEPDEVTYTALI 432
A LFDEM K + VS+TS++ GL G EA +LF M GL P E+T+ ++
Sbjct: 143 AKTLFDEMVDK----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 198
Query: 433 YGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYTILVDGLCKRG 474
Y G ++E F +M ++ + P + + +VD L + G
Sbjct: 199 YACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 128/268 (47%), Gaps = 19/268 (7%)
Query: 207 SYGIVVSVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVG-VSWNTMSYNIVLHSLCQLGK 265
+G ++ V + L L CG+ A +VF + PE V+WN+ V++ + GK
Sbjct: 18 GFGSLIYVQNSLLHLYANCGDVAS---AYKVFDKMPEKDLVAWNS-----VINGFAENGK 69
Query: 266 VKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNN 325
+EA L +M G PD + ++S +IG L ++ + + GL N + N
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 326 IIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKK 385
++DL + G V EA+ + EM V ++V +T+LI G +G A +LF M+ +
Sbjct: 130 LLDLYARCGRVEEAKTLFDEM----VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 386 -IVPDFVSYTSMLHGLCKIGKMVEAHKLFSEML-VMGLEPDEVTYTALIYGHCKAGEMRE 443
++P +++ +L+ G + E + F M +EP + ++ +AG++++
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Query: 444 AFSIHNQMVQKGLTPNVVTYTILVDGLC 471
A+ M + PNVV + L+ G C
Sbjct: 246 AYEYIKSM---PMQPNVVIWRTLL-GAC 269
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 313 RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVS 372
R G YV N+++ L G+V A +V +M + D V + ++I+GF ++G
Sbjct: 16 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE----KDLVAWNSVINGFAENGKPE 71
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
A L+ EM K I PD + S+L KIG + ++ M+ +GL + + L+
Sbjct: 72 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 131
Query: 433 YGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ + G + EA ++ ++MV K N V++T L+ GL G
Sbjct: 132 DLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVGLAVNG 169
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 78/254 (30%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQ------------------------------- 312
DVVSY II+GY Q G E L+++ E+
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 265
Query: 313 ----RKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
RKG+ + Y+ ++++D+ K+ + ++ERV + D + + +L++G+ ++
Sbjct: 266 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL----YCRDGISWNSLVAGYVQN 321
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSM---------------LHG-------------- 399
G + A +LF +M K+ P V+++S+ LHG
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 400 ------LCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
K G + A K+F M V+ DEV++TA+I GH G EA S+ +M +
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVL----DEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 454 KGLTPNVVTYTILV 467
+G+ PN V + ++
Sbjct: 438 QGVKPNQVAFVAVL 451
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 257 LHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL 316
++S C G +K A + +M NV D VS+ II G+ G + + L EE++R+G+
Sbjct: 387 MYSKC--GNIKAARKIFDRM----NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 317 RPNEYVYNNIIDLLCKNGEVVEAERVLREMTK-HGVFPDNVVYTTLISGFCKSGNVSAAH 375
+PN+ + ++ G V EA MTK +G+ + Y + ++G + A+
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 376 KLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGH 435
+M V S S L C + K +E + +E + + Y + +
Sbjct: 501 NFISKM----CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMY 556
Query: 436 CKAGEMREAFSIHNQMVQKGL 456
G +E + +M +KGL
Sbjct: 557 ASNGRWKEMAKLRLRMRKKGL 577
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 14/252 (5%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGV-SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV 282
L +FEG AI VF+ E + WNTM L S A L + M G +
Sbjct: 77 LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSS-----DPVSALKLYVCMISLGLL 131
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
P+ ++ ++ + ++ ++ + + G + YV+ ++I + +NG + +A +V
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 343 LREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCK 402
+ D V YT LI G+ G + A KLFDE+ V D VS+ +M+ G +
Sbjct: 192 FDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDEIP----VKDVVSWNAMISGYAE 243
Query: 403 IGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVT 462
G EA +LF +M+ + PDE T ++ ++G + +H + G N+
Sbjct: 244 TGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKI 303
Query: 463 YTILVDGLCKRG 474
L+D K G
Sbjct: 304 VNALIDLYSKCG 315
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 14/243 (5%)
Query: 234 AIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIIS 293
A +VF + P V +SY ++ G ++ A L ++ V DVVS+ +IS
Sbjct: 188 AHKVFDKSPHRDV----VSYTALIKGYASRGYIENAQKLFDEIP----VKDVVSWNAMIS 239
Query: 294 GYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFP 353
GY + G ++ L+L +++ + +RP+E ++ ++G + +V + HG
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS 299
Query: 354 DNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLF 413
+ + LI + K G + A LF+ + K D +S+ +++ G + EA LF
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLF 355
Query: 414 SEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ--KGLTPNVVTYTILVDGLC 471
EML G P++VT +++ G + IH + + KG+T T L+D
Sbjct: 356 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415
Query: 472 KRG 474
K G
Sbjct: 416 KCG 418
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
I L+S C G+++ A L ++ + DV+S+ +I GY + ++ L L +E+ R
Sbjct: 308 IDLYSKC--GELETACGLFERLPY----KDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH--GVFPDNVVYTTLISGFCKSGNVS 372
G PN+ +I+ G + + + K GV + + T+LI + K G++
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 373 AAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI 432
AAH++F+ + K + S+ +M+ G G+ + LFS M +G++PD++T+ L+
Sbjct: 422 AAHQVFNSILHKSLS----SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 433 YGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYTILVDGLCKRG 474
+G + I M Q +TP + Y ++D L G
Sbjct: 478 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 102/186 (54%), Gaps = 21/186 (11%)
Query: 284 DVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
++V+ +++GY + ++ + L E+ + N + ++ LC +G +A +
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELF 161
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKI 403
EM + V V + TL++G ++G++ A ++FD M + D VS+ +M+ G +
Sbjct: 162 DEMPERNV----VSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIEN 213
Query: 404 GKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTY 463
M EA LF +M E + VT+T+++YG+C+ G++REA+ + +M ++ N+V++
Sbjct: 214 DGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSW 265
Query: 464 TILVDG 469
T ++ G
Sbjct: 266 TAMISG 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 19/266 (7%)
Query: 214 VDSCNLFLTRLCGNFEGKKRAIRVFREYPEV--GVSWNTMSYNIVLHSLCQLGKVKEAHN 271
+ SCN+ + R N + +RA +F + VSW +M + + G V A
Sbjct: 368 LQSCNIIINRYLKNGD-LERAETLFERVKSLHDKVSWTSM-----IDGYLEAGDVSRAFG 421
Query: 272 LLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLC 331
L ++ + D V++ V+ISG Q + L+ ++ R GL+P Y+ ++
Sbjct: 422 LFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG 477
Query: 332 KNGEVVEAERVLREMTKHGVF--PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPD 389
+ + + + + K PD ++ +L+S + K G + A+++F +M QK D
Sbjct: 478 ATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----D 533
Query: 390 FVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHN 449
VS+ SM+ GL G +A LF EML G +P+ VT+ ++ +G + +
Sbjct: 534 TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFK 593
Query: 450 QMVQK-GLTPNVVTYTILVDGLCKRG 474
M + + P + Y ++D L + G
Sbjct: 594 AMKETYSIQPGIDHYISMIDLLGRAG 619
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 24/221 (10%)
Query: 255 IVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
++L L + G V H LL ++ G++ VV + ++S Y + G L++ L E + +
Sbjct: 48 LILRRLSEGGLVHARH-LLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVV-YTTLISGFCKSGNVSA 373
N N ++ K + EA + REM P NVV +T +++ C G
Sbjct: 107 ----NIVTCNAMLTGYVKCRRMNEAWTLFREM------PKNVVSWTVMLTALCDDGRSED 156
Query: 374 AHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIY 433
A +LFDEM ++ +V S+ +++ GL + G M +A ++F M D V++ A+I
Sbjct: 157 AVELFDEMPERNVV----SWNTLVTGLIRNGDMEKAKQVFDAMP----SRDVVSWNAMIK 208
Query: 434 GHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
G+ + M EA + M +K NVVT+T +V G C+ G
Sbjct: 209 GYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYG 245
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 13/189 (6%)
Query: 252 SYNIVLHS---LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+Y+++L S L + K H ++ + C + PD++ ++S Y + G +E ++
Sbjct: 468 TYSVLLSSAGATSNLDQGKHIHCVIAKTTACYD-PDLILQNSLVSMYAKCGAIEDAYEIF 526
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
++ +K + +N++I L +G +A + +EM G P++V + ++S S
Sbjct: 527 AKMVQK----DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHS 582
Query: 369 GNVSAAHKLFDEMKQK-KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVT 427
G ++ +LF MK+ I P Y SM+ L + GK+ EA + S + PD
Sbjct: 583 GLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFIS---ALPFTPDHTV 639
Query: 428 YTALIYGHC 436
Y AL+ G C
Sbjct: 640 YGALL-GLC 647
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 28/247 (11%)
Query: 213 SVDSCNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNL 272
+V S + LT LC + + A+ +F E PE N +S+N ++ L + G +++A +
Sbjct: 137 NVVSWTVMLTALCDDGRSED-AVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQV 191
Query: 273 LMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCK 332
M DVVS+ +I GY + +E+ L ++ K N + +++ C+
Sbjct: 192 FDAMP----SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCR 243
Query: 333 NGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQ--KKIVPDF 390
G+V EA R+ EM + + V +T +ISGF + A LF EMK+ + P+
Sbjct: 244 YGDVREAYRLFCEMPERNI----VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNG 299
Query: 391 VSYTSMLHGLCKIGKMVE----AHKLFSEMLVMGLEP---DEVTYTALIYGHCKAGEMRE 443
+ S+ + +G VE +L ++++ G E D +L++ + +G +
Sbjct: 300 ETLISLAYACGGLG--VEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIAS 357
Query: 444 AFSIHNQ 450
A S+ N+
Sbjct: 358 AQSLLNE 364
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 246 VSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVL 305
VSW +M + C+ G V+ A + +M ++ ++ ++I+GY + EK +
Sbjct: 184 VSWTSM-----VAGYCKCGMVENAREMFDEMPH----RNLFTWSIMINGYAKNNCFEKAI 234
Query: 306 KLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGF 365
L E ++R+G+ NE V ++I G + ER + K + + ++ T L+ F
Sbjct: 235 DLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMF 294
Query: 366 CKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDE 425
+ G++ A +F+ + + D +S++S++ GL G +A FS+M+ +G P +
Sbjct: 295 WRCGDIEKAIHVFEGLPE----TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRD 350
Query: 426 VTYTALIYGHCKAGEMREAFSIHNQMVQK-GLTPNVVTYTILVDGLCKRG 474
VT+TA++ G + + I+ M + G+ P + Y +VD L + G
Sbjct: 351 VTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAG 400
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
N +N+++ + +A QM PD +++ +I ++ + +
Sbjct: 81 NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTH 140
Query: 309 EELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKS 368
++ R G + + YV N+++ + G + A R+ +M F D V +T++++G+CK
Sbjct: 141 SQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMG----FRDVVSWTSMVAGYCKC 196
Query: 369 GNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTY 428
G V A ++FDEM + + +++ M++G K +A LF M G+ +E
Sbjct: 197 GMVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 429 TALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVD 468
++I G + + +V+ +T N++ T LVD
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVD 292
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CG+ E +AI VF PE +++S++ ++ L G +A + QM G +P
Sbjct: 297 CGDIE---KAIHVFEGLPET----DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPR 349
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
V++ ++S G +EK L++ E +++ G+ P Y I+D+L + G++ EAE +
Sbjct: 350 DVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFI 409
Query: 344 REMTKHGVFPDNVVYTTLISGFCK 367
+M V P+ + L+ G CK
Sbjct: 410 LKMH---VKPNAPILGALL-GACK 429
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 318 PNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKL 377
PN +V+N +I E +A +M K ++PDN+ + LI + V +
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 378 FDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCK 437
++ + D S++H G + A ++F + MG D V++T+++ G+CK
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQ---MGFR-DVVSWTSMVAGYCK 195
Query: 438 AGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCK 472
G + A + ++M + N+ T++I+++G K
Sbjct: 196 CGMVENAREMFDEMPHR----NLFTWSIMINGYAK 226
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 12/259 (4%)
Query: 217 CNLFLTRLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
CN L + G+F + A ++F E P N +++N +L + + G V A + +M
Sbjct: 146 CNT-LIHMYGSFRDQASARKLFDEMPHK----NLVTWNSILDAYAKSGDVVSARLVFDEM 200
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGL-RPNEYVYNNIIDLLCKNGE 335
+ DVV++ +I GY + G+ K L++ +++ R G + NE ++I G
Sbjct: 201 ----SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGA 256
Query: 336 VVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTS 395
+ + V R + + ++ T+LI + K G++ A +F K+ D + + +
Sbjct: 257 LNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE--TDALMWNA 314
Query: 396 MLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKG 455
++ GL G + E+ +LF +M ++PDE+T+ L+ G ++EA+ + + G
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESG 374
Query: 456 LTPNVVTYTILVDGLCKRG 474
P Y +VD L + G
Sbjct: 375 AEPKSEHYACMVDVLSRAG 393
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 49/245 (20%)
Query: 254 NIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR 313
+I+ H + ++ + H LL+ + P VS + S G ++ K + +L
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEP-FVSQTLSFSALSSSGDVDYAYKFLSKLSD 70
Query: 314 KGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVY--------------- 358
P Y +N +I + ++ V +M + G+ PD++ Y
Sbjct: 71 ----PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKL 126
Query: 359 --------------------TTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLH 398
TLI + + ++A KLFDEM K + V++ S+L
Sbjct: 127 GGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK----NLVTWNSILD 182
Query: 399 GLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLT- 457
K G +V A +F EM E D VT++++I G+ K GE +A I +QM++ G +
Sbjct: 183 AYAKSGDVVSARLVFDEM----SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSK 238
Query: 458 PNVVT 462
N VT
Sbjct: 239 ANEVT 243
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 98/226 (43%), Gaps = 14/226 (6%)
Query: 233 RAIRVFREYPEVGVS-WNTMSYNIVLHSLCQLGKV---KEAHNLLMQMEFCGNVP-DVVS 287
+A+ +F + +G S N ++ V+ + LG + K H ++ + ++P V+
Sbjct: 223 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV----HLPLTVIL 278
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
+I Y + G + + K + ++N II L +G + E+ ++ +M
Sbjct: 279 QTSLIDMYAKCGSIGDAWSVFYRASVK--ETDALMWNAIIGGLASHGFIRESLQLFHKMR 336
Query: 348 KHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV 407
+ + PD + + L++ G V A F +K+ P Y M+ L + G +
Sbjct: 337 ESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVK 396
Query: 408 EAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQ 453
+AH SEM + +P AL+ G G + A ++ ++++
Sbjct: 397 DAHDFISEMPI---KPTGSMLGALLNGCINHGNLELAETVGKKLIE 439
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 16/273 (5%)
Query: 205 LLSYGIVVSVDSCNLFLT--RLCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQ 262
++ +G + + CN LT C + FR + VSWNT +L + Q
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNAD-SVSWNT-----ILTACLQ 450
Query: 263 LGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYV 322
+ E L M PD ++ G ++ G +I L+ ++ + GL P +++
Sbjct: 451 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFI 510
Query: 323 YNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMK 382
N +ID+ K G + +A R+ M D V ++TLI G+ +SG A LF EMK
Sbjct: 511 KNGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Query: 383 QKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLV-MGLEPDEVTYTALIYGHCKAGEM 441
I P+ V++ +L +G + E KL++ M G+ P + + ++ +AG +
Sbjct: 567 SAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRL 626
Query: 442 REAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
EA ++M L P+VV + L+ +G
Sbjct: 627 NEAERFIDEM---KLEPDVVVWKTLLSACKTQG 656
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 11/220 (5%)
Query: 259 SLCQL----GKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRK 314
SLC + G + A + Q+E PD S+ VII+G G ++ + + +++
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIE----RPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 315 GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSGNVSAA 374
G P+ +++ K + + ++ + K G D V +L++ + ++
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 375 HKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYG 434
LF++ + D VS+ ++L + + VE +LF MLV EPD +T L+ G
Sbjct: 426 FNLFEDFRNN---ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRG 482
Query: 435 HCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
+ ++ +H ++ GL P L+D K G
Sbjct: 483 CVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCG 522
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 113/294 (38%), Gaps = 72/294 (24%)
Query: 249 NTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLM 308
+T S+N+++ L G EA ++ QM G +PD +S ++ + L + +++
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 309 EELQRKGLRPNEYVYNNII-------DLLC---------KNGEVVEAERVLREMTKH--- 349
+ + G + V N+++ DL C N + V +L +H
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 350 ------------------------------------------------GVFPDNVVYTTL 361
G+ P+ + L
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
I + K G++ A ++FD M + D VS+++++ G + G EA LF EM G+
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGI 570
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQM-VQKGLTPNVVTYTILVDGLCKRG 474
EP+ VT+ ++ G + E ++ M + G++P + +VD L + G
Sbjct: 571 EPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAG 624
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 225 CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPD 284
CG+ G+ R I + +V VSW+T+ IV ++ Q G +EA L +M+ G P+
Sbjct: 521 CGSL-GQARRIFDSMDNRDV-VSWSTL---IVGYA--QSGFGEEALILFKEMKSAGIEPN 573
Query: 285 VVSYGVIISGYCQIGQLEKVLKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVL 343
V++ +++ +G +E+ LKL +Q + G+ P + + ++DLL + G + EAER +
Sbjct: 574 HVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFI 633
Query: 344 REMTKHGVFPDNVVYTTLISGFCKSGNVSAAHK 376
EM + PD VV+ TL+S GNV A K
Sbjct: 634 DEMK---LEPDVVVWKTLLSACKTQGNVHLAQK 663
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 18/232 (7%)
Query: 256 VLHSLCQLGKVKEAHNLLMQMEFCGNVPD------------VVSYGVIISGYCQIGQLEK 303
+L+S C+ + H L M + CG++ D +VSY +I+GY Q GQ +
Sbjct: 93 ILNSNCKYDTILNNHILSMYGK-CGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAE 151
Query: 304 VLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
++L ++ ++ L P+++ + +II + +V +++ ++ K + LI+
Sbjct: 152 AIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIA 211
Query: 364 GFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL-E 422
+ + +S A ++F + K D +S++S++ G ++G EA EML G+
Sbjct: 212 MYVRFNQMSDASRVFYGIPMK----DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFH 267
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
P+E + + + IH ++ L N + L D + G
Sbjct: 268 PNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCG 319
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 224 LCGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNV- 282
+ G + ++A +F+E G N Y ++ + + G+ A LL +M+ N
Sbjct: 159 MLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQ 218
Query: 283 PDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERV 342
PDV +Y ++I + Q+ +KV L+ +++R+G+RPN YN +ID K VE E
Sbjct: 219 PDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMEST 278
Query: 343 LREM-TKHGVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLC 401
L +M + PD+ + + F +G + +++ + I P+ ++ +L
Sbjct: 279 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYG 338
Query: 402 KIGKMVEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVV 461
K G + + M VTY +I +AG++++ + M + + P+ V
Sbjct: 339 KSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCV 398
Query: 462 TYTILV 467
T LV
Sbjct: 399 TLCSLV 404
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 104/232 (44%), Gaps = 5/232 (2%)
Query: 248 WNTMSYNIVLHSLCQLGKVKE---AHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKV 304
W + I + + LGK K+ AH L +M G V + Y ++S Y + G+ +
Sbjct: 145 WYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAA 204
Query: 305 LKLMEELQRK-GLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLIS 363
L+E ++ +P+ + Y+ +I + + + +L +M + G+ P+ + Y TLI
Sbjct: 205 FTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLID 264
Query: 364 GFCKSGN-VSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLE 422
+ K+ V L + + PD + S L G++ + + G+E
Sbjct: 265 AYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIE 324
Query: 423 PDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLCKRG 474
P+ T+ L+ + K+G ++ ++ M + + +VTY +++D + G
Sbjct: 325 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAG 376
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 5/228 (2%)
Query: 245 GVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM---EFCGNVPDVVSYGVIISGYCQIGQL 301
G+ NT++YN ++ + + E + L+QM + C PD + + + GQ+
Sbjct: 251 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCK--PDSWTMNSTLRAFGGNGQI 308
Query: 302 EKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTL 361
E + E+ Q G+ PN +N ++D K+G + V+ M K+ V Y +
Sbjct: 309 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVV 368
Query: 362 ISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGL 421
I F ++G++ LF M+ ++I P V+ S++ + K + + + +
Sbjct: 369 IDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDI 428
Query: 422 EPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILVDG 469
D V + L+ + + + E + M +KG P+ +TY +V
Sbjct: 429 RLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 39/204 (19%)
Query: 310 ELQRKGL--RPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCK 367
EL R+ L +PN +Y +I +L K + +A + +EM G ++ VYT L+S + +
Sbjct: 138 ELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSR 197
Query: 368 SGNVSAAHKLFDEMKQK-KIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
SG AA L + MK PD +Y+ ++ ++ + L S+M G+ P+ +
Sbjct: 198 SGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTI 257
Query: 427 TYTALIYGHCKAGEMREAFSIHNQMV---------------------------------- 452
TY LI + KA E S QM+
Sbjct: 258 TYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEK 317
Query: 453 --QKGLTPNVVTYTILVDGLCKRG 474
G+ PN+ T+ IL+D K G
Sbjct: 318 FQSSGIEPNIRTFNILLDSYGKSG 341
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 86/193 (44%), Gaps = 3/193 (1%)
Query: 247 SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLK 306
SW + N L + G+++ N + + G P++ ++ +++ Y + G +K+
Sbjct: 292 SW---TMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSA 348
Query: 307 LMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFC 366
+ME +Q+ YN +ID + G++ + E + R M +FP V +L+ +
Sbjct: 349 VMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYG 408
Query: 367 KSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEV 426
++ + ++ I D V + ++ ++ K E + M G +PD++
Sbjct: 409 RASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKI 468
Query: 427 TYTALIYGHCKAG 439
TY ++ + +G
Sbjct: 469 TYRTMVKAYRISG 481
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 202 FHKLLSYGIVVSVDSCNLFLTRL--CGNFEGKKRAIRVFREYPEVGVSWNTMSYNIVLHS 259
+ K S GI ++ + N+ L GN++ + ++Y SW ++YN+V+ +
Sbjct: 315 YEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKY---HYSWTIVTYNVVIDA 371
Query: 260 LCQLGKVKEAHNLLMQMEFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQRKGLRPN 319
+ G +K+ L M+ P V+ ++ Y + + +K+ ++ ++ +R +
Sbjct: 372 FGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLD 431
Query: 320 EYVYNNIIDLLCKNGEVVEAERVLREMTKHGVFPDNVVYTTLISGFCKSG---NVSAAHK 376
+N ++D + + E + VL M K G PD + Y T++ + SG +V H
Sbjct: 432 LVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHG 491
Query: 377 LFDEMKQKKIV---PDF 390
+ + + + ++V PDF
Sbjct: 492 VVESVGEAQVVVKKPDF 508
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 123/242 (50%), Gaps = 17/242 (7%)
Query: 232 KRAIRVFREYPEVGV-SWNTMSYNIVLHSLCQLGKVKEAHNLLMQMEFCGNVPDVVSYGV 290
+ A+ VFR+ E + +WN+ ++ QL K +EA +LL +M G P+ ++
Sbjct: 332 RHALIVFRQTEENSLCTWNS-----IISGYAQLNKSEEASHLLREMLVAGFQPNSITLAS 386
Query: 291 IISGYCQIGQLEKVLKL-MEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMTKH 349
I+ +I L+ + L+RK + ++N+++D+ K+G++V A++V M+K
Sbjct: 387 ILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR 446
Query: 350 GVFPDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKMV-E 408
D V YT+LI G+ G A LF EM + I PD V+ ++L C K+V E
Sbjct: 447 ----DEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSA-CSHSKLVHE 501
Query: 409 AHKLFSEMLV-MGLEPDEVTYTALIYGHCKAGEMREAFSIHNQMVQKGLTPNVVTYTILV 467
+LF +M G+ P ++ ++ + +AG + +A I + M K P+ T+ L+
Sbjct: 502 GERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYK---PSGATWATLL 558
Query: 468 DG 469
+
Sbjct: 559 NA 560
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 145/363 (39%), Gaps = 72/363 (19%)
Query: 162 DQFTERLIYTYKDWGAHPLVFDVFFQXXXXXXXXXXXXXXFHKLLSYGIVVSVDSCNLF- 220
++ E +I YK + + D F F +++ I VS +L+
Sbjct: 122 NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYV 181
Query: 221 ---LTRLCGNFEGKKRAIRVF-REYPEVGVSWNTMSYNIVLHSLCQLGKVKEAHNLLMQM 276
L + F A R+F R + VSWN V++ G EA L +M
Sbjct: 182 CNALISMYKRFRNMGIARRLFDRMFERDAVSWNA-----VINCYASEGMWSEAFELFDKM 236
Query: 277 EFCGNVPDVVSYGVIISGYCQIGQLEKVLKLMEELQR--KGLRPNEYVYNNIIDLLCKNG 334
F G V+++ +I G Q G L L+ ++ L P II L K
Sbjct: 237 WFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAM----IIGL--KAC 290
Query: 335 EVVEAERVLREMTKHGVF-------PDNVVYTTLISGFCKSGNVSAAHKLFDEMKQKKIV 387
++ A R+ +E+ HG+ DN V TLI+ + K ++ A +F + ++ +
Sbjct: 291 SLIGAIRLGKEI--HGLAIHSSYDGIDN-VRNTLITMYSKCKDLRHALIVFRQTEENSL- 346
Query: 388 PDFVSYTSMLHGLCKIGKMVEAHKLFSEMLVMGLEPDEVTYTALI----------YG--- 434
++ S++ G ++ K EA L EMLV G +P+ +T +++ +G
Sbjct: 347 ---CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Query: 435 HC-----------------------KAGEMREAFSIHNQMVQKGLTPNVVTYTILVDGLC 471
HC K+G++ A + + M ++ + VTYT L+DG
Sbjct: 404 HCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR----DEVTYTSLIDGYG 459
Query: 472 KRG 474
+G
Sbjct: 460 NQG 462
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 288 YGVIISGYCQIGQLEKVLKLMEELQRKGLRPNEYVYNNIIDLLCKNGEVVEAERVLREMT 347
+ V+I+ Y + E+V+ + + KG+RP+ + Y +++ C V RV+
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLK-ACGETLDVAFGRVVHGSI 170
Query: 348 KHGVFPDNV-VYTTLISGFCKSGNVSAAHKLFDEMKQKKIVPDFVSYTSMLHGLCKIGKM 406
+ + ++ V LIS + + N+ A +LFD M ++ D VS+ ++++ G
Sbjct: 171 EVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFER----DAVSWNAVINCYASEGMW 226
Query: 407 VEAHKLFSEMLVMGLEPDEVTYTALIYGHCKAGEMREAFSIHNQM 451
EA +LF +M G+E +T+ + G + G A + ++M
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRM 271