Miyakogusa Predicted Gene

Lj0g3v0259189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259189.1 Non Chatacterized Hit- tr|G7K9W8|G7K9W8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,54.88,0.000000000000006,seg,NULL,CUFF.17066.1
         (220 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g02430.1                                                       106   2e-23
Glyma14g33680.1                                                       103   1e-22
Glyma04g43320.1                                                        62   5e-10

>Glyma13g02430.1 
          Length = 193

 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/176 (45%), Positives = 91/176 (51%), Gaps = 63/176 (35%)

Query: 52  PIVKYSKLKKLFSAKNLTTTT----TAPPSSCGRTQRVTKVLNCGRGSGCASSCVVELQT 107
           P VKYSKLKKLFS KNL T T    TAP                      ASSC      
Sbjct: 74  PSVKYSKLKKLFSGKNLGTNTINAATAP---------------------TASSC------ 106

Query: 108 NTNGYGRNCCRDAGARLPHSSRSGPQFKSLQVTTVSGADMSRNRNQRRGWISNENVIPIS 167
                        G+R        P+       TV+  ++ RN   R     NENV+PIS
Sbjct: 107 -------------GSR--------PR------GTVNSTNVPRNHKHRSS--RNENVVPIS 137

Query: 168 IENMDPPLPVIKGVRKSDEG---NSLWKRRSGGVALKSLKLPQIHHPRHHLQLTSV 220
           IENMDPPLPVIK V+K +E    ++LWKRRSGG ALKSL+L QIHH RHH QLTSV
Sbjct: 138 IENMDPPLPVIKRVQKPEEERQVDNLWKRRSGGAALKSLQLQQIHHSRHHPQLTSV 193


>Glyma14g33680.1 
          Length = 191

 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 90/174 (51%), Gaps = 62/174 (35%)

Query: 52  PIVKYSKLKKLFSAKNLTTT---TTAPPSSCGRTQRVTKVLNCGRGSGCASSCVVELQTN 108
           P VKYSKLKKLFS KNL T+    TAP                      A+SC       
Sbjct: 74  PSVKYSKLKKLFSGKNLGTSIINATAP---------------------TATSC------- 105

Query: 109 TNGYGRNCCRDAGARLPHSSRSGPQFKSLQVTTVSGADMSRNRNQRRGWISNENVIPISI 168
                       G+R        P+       TV+  ++ RN   R     NENV+PIS+
Sbjct: 106 ------------GSR--------PR------GTVNSVNVPRNHRHRSS--KNENVVPISV 137

Query: 169 ENMDPPLPVIKGVRKSDEG---NSLWKRRSGGVALKSLKLPQIHHPRHHLQLTS 219
           ENMDPPLPVIK V+K +E    ++LWKRRSGG ALKSL+L QIHH RHH QLTS
Sbjct: 138 ENMDPPLPVIKRVQKPEEDRQLDNLWKRRSGGAALKSLQLQQIHHSRHHPQLTS 191


>Glyma04g43320.1 
          Length = 207

 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 9/81 (11%)

Query: 145 ADMSRNRNQRRGWISNENVIPISIENMDPPLPVIKGVRKSDEG---NSLWKRRSGG--VA 199
           +DM +N+      +SN  V   SIE MDPPLPV+K V K +E    +SLWKRRSG    A
Sbjct: 131 SDMPKNQK----CLSNNVVFNKSIEEMDPPLPVVKRVCKLEEPKELDSLWKRRSGTDRPA 186

Query: 200 LKSLKLPQIHHPRHHLQLTSV 220
           LKSL+L QI+HPR  +Q  +V
Sbjct: 187 LKSLQLQQINHPRICVQPPTV 207