Miyakogusa Predicted Gene

Lj0g3v0259189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259189.1 Non Characterized Hit- tr|G7K9W8|G7K9W8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,54.88,0.000000000000006,seg,NULL,CUFF.17066.1
         (220 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g060450.1 | hypothetical protein | HC | chr5:25036457-2503...    63   2e-10
Medtr3g073330.1 | hypothetical protein | HC | chr3:33068016-3306...    57   2e-08

>Medtr5g060450.1 | hypothetical protein | HC |
           chr5:25036457-25035296 | 20130731
          Length = 176

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 4/64 (6%)

Query: 140 TTVSGADMSRNRNQRRGWISNENVIPISIENMDPPLPVIKGVRKSDEGN---SLWKRRSG 196
            +V+  ++SR    ++G   NEN++PISIENMDPPLPVIK V K ++ N   SLWKRRSG
Sbjct: 100 VSVNSGEVSRKYCNQKGH-RNENIVPISIENMDPPLPVIKRVMKLEDENQVDSLWKRRSG 158

Query: 197 GVAL 200
            +  
Sbjct: 159 EICF 162


>Medtr3g073330.1 | hypothetical protein | HC |
           chr3:33068016-33066850 | 20130731
          Length = 214

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 7/59 (11%)

Query: 158 ISNENVIP-ISIENMDPPLPVIKGVRKSDEG----NSLWKRRSGG--VALKSLKLPQIH 209
           I NENV+  I I+ MDPPLPVIK V K +EG    NSLWKRRSG     L+SL++ QI 
Sbjct: 143 IRNENVVVGIKIDEMDPPLPVIKRVNKLEEGNKSENSLWKRRSGSSLAPLRSLQVQQIQ 201