Miyakogusa Predicted Gene
- Lj0g3v0257829.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0257829.1 tr|B9GG90|B9GG90_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_641463 PE=4
SV=1,27.52,2e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat;
SUBFAMI,NODE_42430_length_1923_cov_142.029114.path2.1
(541 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 330 2e-90
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 8e-38
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 3e-37
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 3e-37
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 8e-37
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 8e-36
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 145 5e-35
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 6e-34
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 141 1e-33
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 3e-33
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 4e-32
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 136 4e-32
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 7e-32
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 8e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 8e-30
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 122 7e-28
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 122 9e-28
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 9e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 8e-27
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 114 2e-25
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 3e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 113 3e-25
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 6e-24
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 9e-24
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 9e-24
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 98 1e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 8e-20
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 91 2e-18
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 3e-18
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 90 4e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 89 6e-18
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 89 7e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 88 1e-17
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 87 2e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 85 2e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 2e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 83 6e-16
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 3e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 8e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 1e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 70 5e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 4e-11
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 4e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 63 7e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 62 1e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 61 2e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 60 4e-09
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 60 5e-09
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 58 1e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 57 3e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 57 4e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 54 2e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 54 2e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 2e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 50 6e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT2G32230.1 | Symbols: PRORP1 | proteinaceous RNase P 1 | chr2:1... 49 6e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/527 (37%), Positives = 294/527 (55%), Gaps = 44/527 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTYNTLI C+ K + +L M ++ L PN +Y +I C R
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDD-------GFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++E +L M +G S +Y+ +I +CK +AL M EML G+ P V Y
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI +C + A + +M +RG+ P RTY TLV+ + KG ++ + + E+ G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
F SPS+VTYNALI+G C + ++A+ +L M E L PD VSYS V+SGF R
Sbjct: 411 F--------SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD--------------------- 282
++ +A +K EM +K P D T SL++
Sbjct: 463 SYDVDEALRVKREMVEK-GIKP-DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 283 -TFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLF 338
T+++L+N YC E E AL+L + LPD V+Y +L+NGL+K++ +R A RLLL
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 339 YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 398
++PS + Y LIE C+N EFKSVV L+KGF M+G++ EA + ++ML +N++P
Sbjct: 581 LFYEE--SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKP 638
Query: 399 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVI 458
+G YN++I HC G++ KAY +YKEM+ GF+ H +V+AL+KAL+ + + NE++ VI
Sbjct: 639 DGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Query: 459 RNTLRSCNLNDSEQLKILDEIDPERCIIYALLDVLAEKAMDGLLLDG 505
+ LRSC L+++EQ K+L EI+ + +LDVLAE A DG L +G
Sbjct: 699 VHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNG 745
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 213/453 (47%), Gaps = 49/453 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P ++YN ++ A +++N I + V + +M ++SPN TY +IR FC
Sbjct: 167 PGVLSYNAVLDATIRSKRN----ISFAENV--FKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A+ + M KG P+ +Y+ +I +CK +++ ++ M KG+ P++ +Y +
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I LC + R+ E + EM RG S TY+TL++ YC +G F + + E+++ G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+PS++TY +LIH +C + A+E L M L P+E +Y+ ++ GF +
Sbjct: 341 --------LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ +A+ + EM+ D + S+V T+++L+N +C K E A+ +
Sbjct: 393 KGYMNEAYRVLREMN--------DNGFSPSVV-------TYNALINGHCVTGKMEDAIAV 437
Query: 304 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
+ PD VSY +L+G + Y V L + ++EK
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRS------------YDVDEALRVKRE-----MVEKG 480
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 420
+ + L++GF + EA + ML P+ Y LI +C+ G++ KA
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 421 DMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
++ EM+ G + + + LI L R E
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 210/473 (44%), Gaps = 56/473 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+NTLI HN + V +V+ +M V+ P+ TY ++ C R
Sbjct: 184 PDSFTFNTLIHGLFR----HNRASEAVALVD---RMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A+ +L+ M + + P Y+ II C K + AL + EM +KGI P+V Y
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI+ LC+ R +A L +M+ R ++P T+ L++A+ +G+ + L DE+I++
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR- 355
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
S P + TY++LI+G C R DEA + M P+ V+Y+ +I GF +
Sbjct: 356 -------SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+ + + EL EM Q+ + N T+++L++ + D A++
Sbjct: 409 AKRVDEGMELFREMSQRGL---------------VGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE-- 358
K LPD ++Y +LL+GL + T L++F + P Y+I+IE
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNG--KVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 359 ------------------KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEG 400
K + ++ GF +GL EA M P+
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Query: 401 AVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
YN LI H G+ + ++ +EM FV S + L+ + D R ++
Sbjct: 572 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA-STIGLVTNMLHDGRLDK 623
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 197/439 (44%), Gaps = 55/439 (12%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
TY+ LI+ C + LS+ + + +M P+ T ++ FC NR+ +A
Sbjct: 118 TYSILINCFC---RRSQLSLA----LAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
V ++ M E G P + +++ +I ++ +A+ + M+ KG PD+ YG+++
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 128 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 187
LC + + A L ++M + PG Y+T+++A C + +L E+ KG
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG---- 286
Query: 188 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 247
P++VTYN+LI LC + R +A +L M E ++P+ V++SA+I F + +L
Sbjct: 287 ----IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 248 RKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMALKLR 304
+A +L EM ++ +D D T+SSL+N +C D+ A+ +L
Sbjct: 343 VEAEKLYDEMIKRS----IDPDIF-----------TYSSLINGFCMHDRLDEAKHMFELM 387
Query: 305 YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI------E 358
P+ V+Y L+ G K R + LF ++ + + + Y LI
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCK--AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 359 KCANNE--FKSVVE------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYN 404
+C N + FK +V L+ G G V A + + P+ YN
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 405 LLIFDHCIGGNVHKAYDMY 423
++I C G V +D++
Sbjct: 506 IMIEGMCKAGKVEDGWDLF 524
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 176/414 (42%), Gaps = 37/414 (8%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
V L+ M P+ + ++ N+ + + + M G+S + +YS +I+
Sbjct: 66 VNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINC 125
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
FC+ ++ AL + +M+ G PD+ L+ CH R+ +A L +M+ G P
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 185
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
T++TL+ S+ L D ++ KG P LVTY +++GLC
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVKG--------CQPDLVTYGIVVNGLCKRGDI 237
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
D AL +L+ M + ++P V Y+ +I + + A L EMD K P + T
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI-RP-NVVTYN 295
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
SL++ L N+ +S A L + + P+ V++ L++ K+ A
Sbjct: 296 SLIRCLCNYGRWSD----------ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 392
+L YD +I++ + + + L+ GF M ++EA + M+
Sbjct: 346 EKL-----------------YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 393 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
++ P YN LI C V + ++++EM G V + + LI +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
DPD TY++LI+ C ++ ++ M ++ PN TY +I+ FC
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAK-------HMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
RV+E + + R M+++GL + +Y+ +I F + +E A + +M+ G+ PD+ Y
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+L+ LC+ ++ A +F+ + M P TY+ ++E C G+ + L
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL------- 523
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
F + P++VTY ++ G C +EA + R M E PD +Y+ +I
Sbjct: 524 -FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 243 RIRELRKAFELKLEM 257
R + + EL EM
Sbjct: 583 RDGDKAASAELIREM 597
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD TYN +I C+A K + +L+ + ++ + PN TY M+ FC +
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDG-------WDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
EEA + R M E+G P + +Y+ +I ++ + + E+ EM D G
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 610
Query: 123 LLIQLLCHQRRL 134
L+ +L H RL
Sbjct: 611 LVTNML-HDGRL 621
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 38/312 (12%)
Query: 194 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
PS+V ++ L+ + + D + + M + + + +YS +I+ F R +L A +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 254 KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYL 310
+M + +V T +SL+N +C ++ A+ L Q Y
Sbjct: 139 LAKM--------MKLGYEPDIV-------TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 311 PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVE 370
PDS ++ L++GL + + A L+ +V C P + Y I+
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ--PDLVTYGIV-------------- 227
Query: 371 LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
V G RG ++ A M P +YN +I C NV+ A +++ EM + G
Sbjct: 228 -VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 431 FVCHMFSVLALIKALYCDERYNEMSWVIRNTL-RSCNLNDSEQLKILDEIDPERCIIYA- 488
++ + +LI+ L R+++ S ++ + + R N N ++D E ++ A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 489 -LLDVLAEKAMD 499
L D + ++++D
Sbjct: 347 KLYDEMIKRSID 358
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 206/473 (43%), Gaps = 56/473 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+ TLI HN + V +V+ QM R P+ TY ++ C R
Sbjct: 186 PDTFTFTTLIHGLFL----HNKASEAVALVD---QMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A+ +L+ M + + Y+ II CK K M AL + EM +KGI PDV Y
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC+ R +A L +M+ R ++P T+ L++A+ +G+ + L DE+I++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR- 357
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
S P + TY++LI+G C R DEA + M P+ V+YS +I GF +
Sbjct: 358 -------SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+ + + EL EM Q+ + N T+++L++ + D A+M
Sbjct: 411 AKRVEEGMELFREMSQRGL---------------VGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
K P+ ++Y +LL+GL K + A +++F + P Y+I+IE
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNG--KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 360 CANNEFKSVVEL-------------------VKGFRMRGLVNEAARARDTMLHRNYRPEG 400
C + + EL + GF +G EA M P
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 401 AVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
YN LI G+ + ++ KEM GF S + L+ + D R ++
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA-STIGLVTNMLHDGRLDK 625
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 183/439 (41%), Gaps = 55/439 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P V +N L+SA + K + ++ L QM +S + TY I FC R++
Sbjct: 81 PSIVEFNKLLSAVAKMNK-------FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + G P + S +++ +C +K + A+ + +M++ G PD +
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI L + EA L +M+ RG P TY T+V C +G+ L + ++KG
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK-MEKG 252
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+V YN +I GLC ++ D+AL + M + PD +YS++IS
Sbjct: 253 -------KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
A L +M +++ N ++V TFS+L++ + E K A KL
Sbjct: 306 YGRWSDASRLLSDM--------IERKINPNVV-------TFSALIDAFVKEGKLVEAEKL 350
Query: 304 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
+ PD +Y L+NG A + I C P+ + Y LI+
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYSTLIKGF 408
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAA----------RARD---------TMLHRNYRPEG 400
C + +EL + RGLV +ARD M+ P
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 401 AVYNLLIFDHCIGGNVHKA 419
YN+L+ C G + KA
Sbjct: 469 LTYNILLDGLCKNGKLAKA 487
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 180/390 (46%), Gaps = 42/390 (10%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+ D V YNT+I C+ + + + L+ +M + + P+ TY +I C+
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDD-------ALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R +A +L M E+ ++P+ ++S +I F K ++ +A ++ EM+ + I PD+ Y
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI C RL EA+ +F+ M+ + P TY TL++ +C + L E+ Q+
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRP--DEALEILRGMPEMLLDPDEVSYSAVISG 240
G + + VTY LIHG FFQ D A + + M + + P+ ++Y+ ++ G
Sbjct: 428 GLV--------GNTVTYTTLIHG--FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC----AEDK 296
+ +L KA + E Q+ T P + T++ ++ C ED
Sbjct: 478 LCKNGKLAKAM-VVFEYLQRSTMEP--------------DIYTYNIMIEGMCKAGKVEDG 522
Query: 297 AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDIL 356
E+ L + P+ ++Y +++G +K + A LL + +P+ Y+ L
Sbjct: 523 WELFCNLSLKGVS-PNVIAYNTMISGFCRKGSKEEADSLL--KKMKEDGPLPNSGTYNTL 579
Query: 357 IE-KCANNEFKSVVELVKGFRMRGLVNEAA 385
I + + + ++ EL+K R G +A+
Sbjct: 580 IRARLRDGDREASAELIKEMRSCGFAGDAS 609
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 170/414 (41%), Gaps = 52/414 (12%)
Query: 76 EKGLSPHADSYSRII-SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 134
E+ + + Y I+ +R ++ A+++ +M+ FP + + L+ + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 135 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 194
L ++M G+S TY + +C + + S + ++++ G + P
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG--------YEP 151
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
+VT ++L++G C +R +A+ ++ M EM PD +++ +I G + +A L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 255 LEMDQKETCWP---------------LDQDTNESLVKDLSNHD------TFSSLVNDYCA 293
+M Q+ C P D D SL+K + ++++++ C
Sbjct: 212 DQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 294 EDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYI--------VA 342
+ AL L + PD +Y L++ L A+RLL I V
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 343 HCLTIPSYI----------IYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 392
I +++ +YD +I++ + + + L+ GF M ++EA + M+
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 393 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
++ P Y+ LI C V + ++++EM G V + + LI +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD TYN +I C+A K + EL+ + ++ +SPN Y MI FC +
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDG-------WELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
EEA +L+ M E G P++ +Y+ +I ++ + + E+ EM G D G
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 612
Query: 123 LLIQLLCHQRRL 134
L+ +L H RL
Sbjct: 613 LVTNML-HDGRL 623
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 201/446 (45%), Gaps = 55/446 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VT+ TL+ + HN + V +VE +M V+ P+ TY +I C R
Sbjct: 168 PDTVTFTTLVHGLFQ----HNKASEAVALVE---RMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + + YS +I CK + + AL + EM +KGI PDV Y
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC+ R +A L +ML R ++P T+++L++A+ +G+ + L DE+IQ+
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR- 339
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
S P++VTYN+LI+G C R DEA +I M PD V+Y+ +I+GF +
Sbjct: 340 -------SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+++ EL +M ++ + N T+++L++ + D A+M
Sbjct: 393 AKKVVDGMELFRDMSRRGL---------------VGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE-- 358
K P+ ++Y LL+GL K + +++F + P Y+I+ E
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNG--KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 359 ------------------KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEG 400
K + + ++ GF +GL EA M P+
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 401 AVYNLLIFDHCIGGNVHKAYDMYKEM 426
YN LI H G+ + ++ KEM
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 201/471 (42%), Gaps = 76/471 (16%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P V ++ L+SA + +K + ++ +M + +S N TY MI C R++
Sbjct: 63 PSIVEFSKLLSAIAKMKK-------FDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQ 115
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ IL M + G P + + +++ FC + +A+ + +M++ G PD +
Sbjct: 116 LSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 175
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ L + EA L + M+++G P TY ++ C +GE +L ++ ++KG
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK-MEKG 234
Query: 184 FLPYYVTSFS----------------------------PSLVTYNALIHGLCFFQRPDEA 215
+ V +S P + TY++LI LC + R +A
Sbjct: 235 KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 294
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
+L M E ++P+ V+++++I F + +L +A +L EM Q+ +D
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS----ID-------- 342
Query: 276 KDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
N T++SL+N +C D+ A+ L LPD V+Y L+NG K +
Sbjct: 343 ---PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK--AKKVV 397
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILI------EKCANNE--FKSVVE------------LV 372
+ LF ++ + + + Y LI C N + FK +V L+
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 373 KGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
G G + +A + + P+ YN++ C G V +D++
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 158/324 (48%), Gaps = 31/324 (9%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ VT+N+LI A + K + +L+ +M R + PN TY +I FC +
Sbjct: 307 NPNVVTFNSLIDAFAKEGK-------LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R++EA I LM K P +Y+ +I+ FCK K++ +E+ +M +G+ + Y
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI A+ +F++M+ G+ P TY+TL++ C G+ K + E +QK
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQK 478
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
+ P + TYN + G+C + ++ ++ + + PD ++Y+ +ISGF
Sbjct: 479 -------SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Query: 243 RIRELRKAFELKLEMDQKETCWPL-DQDTNESLVK-DLSNHDTFSSLVNDYCAEDKAEMA 300
+ +A+ L ++M + PL D T +L++ L + D +S AE+
Sbjct: 532 KKGLKEEAYTLFIKMKED---GPLPDSGTYNTLIRAHLRDGDKAAS----------AELI 578
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLH 324
++R ++ D+ +Y L+ + LH
Sbjct: 579 KEMR-SCRFAGDASTYGLVTDMLH 601
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 170/411 (41%), Gaps = 56/411 (13%)
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+++EAV + M + P +S+++S K K+ + +M G+ +++ Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++I LC + +L A + +M+ G P T ++L+ +C S+ L D++++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 183 GFLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEA 215
G+ P VT P LVTY A+I+GLC PD A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
L +L M + ++ D V YS VI + R + A L EMD N+ +
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD------------NKGIR 272
Query: 276 KDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRL 335
D+ + + S + +Y A L + + P+ V++ L++ K+ A +L
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 336 LLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRN 395
+D +I++ + + L+ GF M ++EA + M+ ++
Sbjct: 333 -----------------FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 396 YRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
P+ YN LI C V +++++M G V + + LI +
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +TYNTL+ C KN L V ++ + ++ P+ TY M C +
Sbjct: 448 PNIMTYNTLLDGLC---KNGKLEKAMV----VFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VE+ + ++ KG+ P +Y+ +IS FCK +A + ++M + G PD Y
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI+ + +L +EM + TY + + L D + KG
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM------------LHDGRLDKG 608
Query: 184 FL 185
FL
Sbjct: 609 FL 610
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 204/472 (43%), Gaps = 52/472 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD ++Y+T+++ C + ++ +L M + L PN Y +I L C +
Sbjct: 279 PDVISYSTVVNGYCRFGELD-------KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ EA M +G+ P Y+ +I FCK ++ A + EM + I PDV Y
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I C ++EA LF EM +G+ P T+ L+ YC G F + + +IQ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
SP++VTY LI GLC D A E+L M ++ L P+ +Y+++++G +
Sbjct: 452 --------CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+ +A +L E + L+ DT T+++L++ YC DKA+
Sbjct: 504 SGNIEEAVKLVGEFEAA----GLNADTV-----------TYTTLMDAYCKSGEMDKAQEI 548
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
LK P V++ +L+NG +LL + + P+ ++ L+++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG--IAPNATTFNSLVKQY 606
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
C N K+ + K M R P+G Y L+ HC N+ +A
Sbjct: 607 CIRNNLKAATAIYK----------------DMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSE 471
+ +++EM GF + + LIK +++ E V R D E
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 196/440 (44%), Gaps = 47/440 (10%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 106
N +Y +I C R++EA +L LM KG +P SYS +++ +C+ E+ K ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
M KG+ P+ + YG +I LLC +L EA + F EM+ +G+ P Y TL++ +C +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G+ K F + +P ++TY A+I G C EA ++ M
Sbjct: 365 GDI--------RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS 286
L+PD V+++ +I+G+ + ++ AF + M Q C P N T+++
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSP--------------NVVTYTT 461
Query: 287 LVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAH 343
L++ C E D A L ++ P+ +Y ++NGL K A +L+ + A
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 344 CLTIPSYIIYDILIEKCANNEFKSVVELVK-------------------GFRMRGLVNEA 384
L + ++ C + E E++K GF + G++ +
Sbjct: 522 -LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 385 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 444
+ + ML + P +N L+ +CI N+ A +YK+M G + L+K
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 445 LYCDERYNEMSWVIRNTLRS 464
+C R + +W + ++
Sbjct: 641 -HCKARNMKEAWFLFQEMKG 659
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 48/311 (15%)
Query: 3 DPDCVTYNTLISAACEAE--------KNHNLS-------IPYVRIV-------------E 34
+PD VT+ LI+ C+A NH + + Y ++ E
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
L H+M L PN TY ++ C +EEAV ++ GL+ +Y+ ++ +C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K+ EM KA E+ EML KG+ P + + +L+ C L + L ML +G++P
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 214
T+++LV+ YC++ + ++ +G P TY L+ G C + E
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRG--------VGPDGKTYENLVKGHCKARNMKE 649
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 274
A + + M +YS +I GF + ++ +A E+ DQ E L
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV------------FDQMRREGL 697
Query: 275 VKDLSNHDTFS 285
D D FS
Sbjct: 698 AADKEIFDFFS 708
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 214/513 (41%), Gaps = 85/513 (16%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +LIS+ E K N++ +V+ +L ++ + + ++ D +
Sbjct: 134 DLKVAQSLISSFWERPK-LNVTDSFVQFFDLL-VYTYKDWGSDPRVFDVFFQVLVDFGLL 191
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKN-KEMGKALEMKVEMLDKGIFPDVHAYGL 123
EA + M GL DS + ++R K+ + A+ + E + G+ +V +Y +
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I +C R+ EA L M L+G +P +Y T+V YC GE KV+ L + + +KG
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 184 FLP-YYV------------------TSFS--------PSLVTYNALIHGLCFFQRPD--E 214
P Y+ +FS P V Y LI G C +R D
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC--KRGDIRA 369
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 274
A + M + PD ++Y+A+ISGF +I ++ +A +L EM C L+ D+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM----FCKGLEPDSV--- 422
Query: 275 VKDLSNHDTFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRF 331
TF+ L+N YC + A ++ QA P+ V+Y L++GL K+
Sbjct: 423 --------TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 332 ATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGL---------- 380
A LL + + P+ Y+ ++ C + + V+LV F GL
Sbjct: 475 ANELL--HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 381 ---------VNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
+++A ML + +P +N+L+ C+ G + + ML G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 432 VCHMFSVLALIKALYCDERYNEMSWVIRNTLRS 464
+ + +L+K YC IRN L++
Sbjct: 593 APNATTFNSLVKQ-YC----------IRNNLKA 614
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 204/472 (43%), Gaps = 52/472 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD ++Y+T+++ C + ++ +L M + L PN Y +I L C +
Sbjct: 279 PDVISYSTVVNGYCRFGELD-------KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ EA M +G+ P Y+ +I FCK ++ A + EM + I PDV Y
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I C ++EA LF EM +G+ P T+ L+ YC G F + + +IQ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
SP++VTY LI GLC D A E+L M ++ L P+ +Y+++++G +
Sbjct: 452 --------CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+ +A +L E + L+ DT T+++L++ YC DKA+
Sbjct: 504 SGNIEEAVKLVGEFEAA----GLNADTV-----------TYTTLMDAYCKSGEMDKAQEI 548
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
LK P V++ +L+NG +LL + + P+ ++ L+++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG--IAPNATTFNSLVKQY 606
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
C N K+ + K M R P+G Y L+ HC N+ +A
Sbjct: 607 CIRNNLKAATAIYK----------------DMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSE 471
+ +++EM GF + + LIK +++ E V R D E
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 196/440 (44%), Gaps = 47/440 (10%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 106
N +Y +I C R++EA +L LM KG +P SYS +++ +C+ E+ K ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
M KG+ P+ + YG +I LLC +L EA + F EM+ +G+ P Y TL++ +C +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G+ K F + +P ++TY A+I G C EA ++ M
Sbjct: 365 GDI--------RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS 286
L+PD V+++ +I+G+ + ++ AF + M Q C P N T+++
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSP--------------NVVTYTT 461
Query: 287 LVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAH 343
L++ C E D A L ++ P+ +Y ++NGL K A +L+ + A
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 344 CLTIPSYIIYDILIEKCANNEFKSVVELVK-------------------GFRMRGLVNEA 384
L + ++ C + E E++K GF + G++ +
Sbjct: 522 -LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 385 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 444
+ + ML + P +N L+ +CI N+ A +YK+M G + L+K
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 445 LYCDERYNEMSWVIRNTLRS 464
+C R + +W + ++
Sbjct: 641 -HCKARNMKEAWFLFQEMKG 659
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 48/311 (15%)
Query: 3 DPDCVTYNTLISAACEAE--------KNHNLS-------IPYVRIV-------------E 34
+PD VT+ LI+ C+A NH + + Y ++ E
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
L H+M L PN TY ++ C +EEAV ++ GL+ +Y+ ++ +C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K+ EM KA E+ EML KG+ P + + +L+ C L + L ML +G++P
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 214
T+++LV+ YC++ + ++ +G P TY L+ G C + E
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRG--------VGPDGKTYENLVKGHCKARNMKE 649
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 274
A + + M +YS +I GF + ++ +A E+ DQ E L
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV------------FDQMRREGL 697
Query: 275 VKDLSNHDTFS 285
D D FS
Sbjct: 698 AADKEIFDFFS 708
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 214/513 (41%), Gaps = 85/513 (16%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +LIS+ E K N++ +V+ +L ++ + + ++ D +
Sbjct: 134 DLKVAQSLISSFWERPK-LNVTDSFVQFFDLL-VYTYKDWGSDPRVFDVFFQVLVDFGLL 191
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKN-KEMGKALEMKVEMLDKGIFPDVHAYGL 123
EA + M GL DS + ++R K+ + A+ + E + G+ +V +Y +
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I +C R+ EA L M L+G +P +Y T+V YC GE KV+ L + + +KG
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 184 FLP-YYV------------------TSFS--------PSLVTYNALIHGLCFFQRPD--E 214
P Y+ +FS P V Y LI G C +R D
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC--KRGDIRA 369
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 274
A + M + PD ++Y+A+ISGF +I ++ +A +L EM C L+ D+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM----FCKGLEPDSV--- 422
Query: 275 VKDLSNHDTFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRF 331
TF+ L+N YC + A ++ QA P+ V+Y L++GL K+
Sbjct: 423 --------TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 332 ATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGL---------- 380
A LL + + P+ Y+ ++ C + + V+LV F GL
Sbjct: 475 ANELL--HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 381 ---------VNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
+++A ML + +P +N+L+ C+ G + + ML G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 432 VCHMFSVLALIKALYCDERYNEMSWVIRNTLRS 464
+ + +L+K YC IRN L++
Sbjct: 593 APNATTFNSLVKQ-YC----------IRNNLKA 614
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 204/460 (44%), Gaps = 58/460 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V YNT+I C + +L ++I + Q + P+ Y C+IR FC+
Sbjct: 387 PNEVIYNTMIDGYC---RKGDLVGARMKIEAMEKQ----GMKPDHLAYNCLIRRFCELGE 439
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E A + M KG+SP ++Y+ +I + + E K ++ EM D G P+V +YG
Sbjct: 440 MENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGT 499
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC +LLEA+ + ++M RG+SP R Y+ L++ C KG+ F E+++KG
Sbjct: 500 LINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+LVTYN LI GL + EA ++L + L PD +Y+++ISG+
Sbjct: 560 --------IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+++ C L ++ S +K T+ L++ C ++ E+ +L
Sbjct: 612 AGNVQR-------------CIALYEEMKRSGIK--PTLKTYHLLIS-LCTKEGIELTERL 655
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTI-----PSYIIYDILIE 358
+ PD LL++ V HC + ++ + +IE
Sbjct: 656 FGEMSLKPD----------------------LLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Query: 359 KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 418
K + + L+ G G + E D M R PE YN+++ HC +
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 419 AYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVI 458
AY Y+EM GF+ + L+ L + R E VI
Sbjct: 754 AYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVI 793
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 192/465 (41%), Gaps = 64/465 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P +TYNTLI C+A + ++ +M + P+ T+ +++
Sbjct: 247 PSLITYNTLIDGYCKAGNPE-------KSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VE+A +L+ M + G P A ++S + + N++ AL + +D G+ + + +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ LC + ++ +A ++ + +G+ P Y+T+++ YC KG+ ++ E ++K
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEK- 417
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P + YN LI C + A + + M + P +Y+ +I G+ R
Sbjct: 418 ------QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMA 300
E K F++ EM+ T + N ++ +L+N C K A++
Sbjct: 472 KYEFDKCFDILKEMEDNGT---------------MPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKA----TSRFATRLLLFYIVAHCLTIPSYIIYDIL 356
+ P Y +L++G K RF+ +L I + +T Y+ L
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT------YNTL 570
Query: 357 IEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNV 416
I+ G M G ++EA + + +P+ YN LI + GNV
Sbjct: 571 ID---------------GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNV 615
Query: 417 HKAYDMYKEMLHYGF-----VCHMFSVLALIKALYCDER-YNEMS 455
+ +Y+EM G H+ L + + ER + EMS
Sbjct: 616 QRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMS 660
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 168/389 (43%), Gaps = 45/389 (11%)
Query: 76 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 135
E P Y + I K ++GK LE+ M I+P V Y +LI LC +R+
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 136 EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 195
+A LF EML R + P TY+TL++ YC G K F +++ + PS
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM--------KADHIEPS 283
Query: 196 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 255
L+T+N L+ GL ++A +L+ M ++ PD ++S + G+
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS------------- 330
Query: 256 EMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL--RYQAQYL-PD 312
++ E + + +S VK N T S L+N C E K E A ++ R A+ L P+
Sbjct: 331 SNEKAEAALGVYETAVDSGVK--MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 313 SVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVEL 371
V Y +++G +K R+ + + + P ++ Y+ LI + C E ++ +
Sbjct: 389 EVIYNTMIDGYCRKG-DLVGARMKIEAMEKQGMK-PDHLAYNCLIRRFCELGEMENAEKE 446
Query: 372 VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
V +++G+ P YN+LI + K +D+ KEM G
Sbjct: 447 VNKMKLKGV----------------SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 432 VCHMFSVLALIKALYCDERYNEMSWVIRN 460
+ ++ S LI L + E V R+
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 40/287 (13%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSI-----------PYVRIVELY-------------- 36
T P+ V+Y TLI+ C+ K I P VRI +
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 37 ---HQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
+M + + N TY +I ++ EA +L ++ KGL P +Y+ +IS +
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
+ + + + EM GI P + Y LLI LC + + LF EM L+ P
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLK---PDL 665
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
Y+ ++ Y + G+ K F+LQ ++I+K S TYN+LI G +
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEK--------SIGLDKTTYNSLILGQLKVGKLC 717
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
E ++ M ++P+ +Y+ ++ G +++ A+ EM +K
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 206/444 (46%), Gaps = 51/444 (11%)
Query: 4 PDCVTYNTLISAACEA-EKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD +TYN +IS C+A E N+ LS+ +M V SP+ TY ++R CD
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSV--------LDRMSV---SPDVVTYNTILRSLCDSG 218
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++++A+ +L M ++ P +Y+ +I C++ +G A+++ EM D+G PDV Y
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+L+ +C + RL EA +M G P T++ ++ + C G + L ++++K
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G FSPS+VT+N LI+ LC A++IL MP+ P+ +SY+ ++ GF
Sbjct: 339 G--------FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT-FSSLVNDYCAEDKAEMAL 301
+ +++ +A E LE C+P D+ ++T ++L D ED E+
Sbjct: 391 KEKKMDRAIEY-LERMVSRGCYP-----------DIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 302 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCA 361
+L + P ++Y +++GL K + A + LL + A L P I Y
Sbjct: 439 QLSSKGCS-PVLITYNTVIDGLAKAGKTGKAIK-LLDEMRAKDLK-PDTITYS------- 488
Query: 362 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 421
LV G G V+EA + RP +N ++ C +A D
Sbjct: 489 --------SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 422 MYKEMLHYGFVCHMFSVLALIKAL 445
M++ G + S LI+ L
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGL 564
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 144/300 (48%), Gaps = 30/300 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +T+N ++ + C + ++ +L M + SP+ T+ +I C +
Sbjct: 307 PNVITHNIILRSMCSTGR-------WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ IL M + G P++ SY+ ++ FCK K+M +A+E M+ +G +PD+ Y
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ LC ++ +A ++ ++ +G SP TY+T+++ G+ K L DE+ K
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK- 478
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P +TY++L+ GL + DEA++ M + P+ V++++++ G +
Sbjct: 479 -------DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
R+ +A + + M + C P N +++ L+ E A+ AL+L
Sbjct: 532 SRQTDRAIDFLVFMINR-GCKP--------------NETSYTILIEGLAYEGMAKEALEL 576
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTYNT+++A C+ K + VE+ +Q+ + SP TY +I +
Sbjct: 412 PDIVTYNTMLTALCKDGKVED-------AVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+A+ +L M K L P +YS ++ + ++ +A++ E GI P+ +
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ LC R+ A D M+ RG P +Y L+E +G + L +E+ KG
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 184 FL 185
+
Sbjct: 585 LM 586
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 144/365 (39%), Gaps = 53/365 (14%)
Query: 90 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 149
+ + + E+ + + M+ G PD+ LI+ C + +A + + + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 150 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 209
P TY+ ++ YC GE + + D + S SP +VTYN ++ LC
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM-----------SVSPDVVTYNTILRSLCDS 217
Query: 210 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 269
+ +A+E+L M + PD ++Y+ +I R + A +L EM + C P
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR-GCTP---- 272
Query: 270 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY---QAQYLPDSVSYCLLLNGLHKK 326
+ T++ LVN C E + + A+K + P+ +++ ++L +
Sbjct: 273 ----------DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC-- 320
Query: 327 ATSRFATRLLLFYIVAHCLTIPSYIIYDILIE---------------------KCANNEF 365
+T R+ L + PS + ++ILI C N
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 366 KSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 425
S L+ GF ++ A + M+ R P+ YN ++ C G V A ++ +
Sbjct: 381 -SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 426 MLHYG 430
+ G
Sbjct: 440 LSSKG 444
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 125/310 (40%), Gaps = 58/310 (18%)
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
GE + F + ++ G +P ++ LI G C + +A +IL +
Sbjct: 116 GELEEGFKFLENMVYHGNVP--------DIIPCTTLIRGFCRLGKTRKAAKILEILEGSG 167
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD---- 282
PD ++Y+ +ISG+ + E+ A + M + P D T ++++ L +
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSP-DVVTYNTILRSLCDSGKLKQ 222
Query: 283 ------------------TFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLN 321
T++ L+ C + A+KL + + PD V+Y +L+N
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 322 GLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGL 380
G+ K+ A + L + C P+ I ++I++ C+ + +L+
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQ--PNVITHNIILRSMCSTGRWMDAEKLLA------- 333
Query: 381 VNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLA 440
ML + + P +N+LI C G + +A D+ ++M +G + S
Sbjct: 334 ---------DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 441 LIKALYCDER 450
L+ +C E+
Sbjct: 385 LLHG-FCKEK 393
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 222/496 (44%), Gaps = 54/496 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VT+NTLI HN + + +++ +M + P+ TY ++ C R
Sbjct: 184 PNTVTFNTLIHGLFL----HNKASEAMALID---RMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A +L M + L P Y+ II CK K M AL + EM KGI P+V Y
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC+ R +A L +M+ R ++P T+ L++A+ +G+ + L DE++++
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR- 355
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
S PS+VTY++LI+G C R DEA ++ M PD V+Y+ +I GF +
Sbjct: 356 -------SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA--- 300
+ + + E+ EM Q+ + N T++ L+ +MA
Sbjct: 409 YKRVEEGMEVFREMSQRGL---------------VGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
K P+ ++Y LL+GL K + +++F + P+ Y+I+IE
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNG--KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
C + + +L ++G+ +P+ YN +I C G+ +A
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGV----------------KPDVVAYNTMISGFCRKGSKEEA 555
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNL-NDSEQLKILDE 478
++KEM G + + LI+A D + +I+ +RSC D+ + ++
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE-MRSCGFAGDASTIGLVTN 614
Query: 479 IDPERCIIYALLDVLA 494
+ + + + LD+L+
Sbjct: 615 MLHDGRLDKSFLDMLS 630
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 191/446 (42%), Gaps = 52/446 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P + ++ L+SA + K + ++ L QM + N TY +I FC R++
Sbjct: 79 PSIIEFSKLLSAIAKMNK-------FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 131
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + G P+ + S +++ +C +K + +A+ + +M G P+ +
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI L + EA L M+ +G P TY +V C +G+ F+L +++ Q
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ-- 249
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P ++ YN +I GLC ++ D+AL + + M + P+ V+YS++IS
Sbjct: 250 ------GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
A L +M +++ N + TFS+L++ + E K A KL
Sbjct: 304 YGRWSDASRLLSDM--------IERKINPDVF-------TFSALIDAFVKEGKLVEAEKL 348
Query: 304 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
+ P V+Y L+NG A ++ F + HC P + Y+ LI+
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF--PDVVTYNTLIKGF 406
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
C + +E+ + RGLV YN+LI G+ A
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNT----------------VTYNILIQGLFQAGDCDMA 450
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKAL 445
+++KEM+ G ++ + L+ L
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGL 476
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 153/326 (46%), Gaps = 35/326 (10%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD T++ LI A + K V +LY +M R + P+ TY +I FC +
Sbjct: 323 NPDVFTFSALIDAFVKEGK-------LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R++EA + M K P +Y+ +I FCK K + + +E+ EM +G+ + Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LIQ L A+++F+EM+ G+ P TY+TL++ C G+ K + E +Q+
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQR 494
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
+ P++ TYN +I G+C + ++ ++ + + PD V+Y+ +ISGF
Sbjct: 495 -------SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLV----NDYCAEDKAE 298
R +A L EM + T L N +++L+ D E AE
Sbjct: 548 RKGSKEEADALFKEMKEDGT---------------LPNSGCYNTLIRARLRDGDREASAE 592
Query: 299 MALKLRYQAQYLPDSVSYCLLLNGLH 324
+ ++R + D+ + L+ N LH
Sbjct: 593 LIKEMR-SCGFAGDASTIGLVTNMLH 617
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 173/387 (44%), Gaps = 36/387 (9%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P + YNT+I C+ + + + L+ +M + + PN TY +I C+
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDD-------ALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R +A +L M E+ ++P ++S +I F K ++ +A ++ EM+ + I P + Y
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI C RL EA+ +F+ M+ + P TY+TL++ +C + + E+ Q+
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G + + VTYN LI GL D A EI + M + P+ ++Y+ ++ G
Sbjct: 426 GLV--------GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
+ +L KA + E Q+ P T++ ++ C K E
Sbjct: 478 KNGKLEKAM-VVFEYLQRSKMEPTIY--------------TYNIMIEGMCKAGKVEDGWD 522
Query: 303 LRYQ---AQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE- 358
L PD V+Y +++G +K + A LF + T+P+ Y+ LI
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA--LFKEMKEDGTLPNSGCYNTLIRA 580
Query: 359 KCANNEFKSVVELVKGFRMRGLVNEAA 385
+ + + ++ EL+K R G +A+
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDAS 607
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 164/410 (40%), Gaps = 74/410 (18%)
Query: 102 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
A+ + EM+ FP + + L+ + + L ++M G+ TY L+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 162 AYCLKGEFSKVFHLQDEVIQKGFLP---------------------------YYVTSFSP 194
+C + + + ++++ G+ P +VT + P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
+ VT+N LIHGL + EA+ ++ M PD V+Y V++G + + AF L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 255 LEMDQKE--------------TCWPLDQDTNESLVKDLS------NHDTFSSLVNDYCAE 294
+M+Q + C D +L K++ N T+SSL++ C
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 295 DKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYI 351
+ A +L + + PD ++ L++ K+ A +L
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL---------------- 348
Query: 352 IYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHC 411
YD ++++ + + L+ GF M ++EA + + M+ ++ P+ YN LI C
Sbjct: 349 -YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 412 IGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY----CD---ERYNEM 454
V + ++++EM G V + + LI+ L+ CD E + EM
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 215/487 (44%), Gaps = 60/487 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P +T NTL++ C K + + R+VE Q PNE TY ++ + C +
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQ-------PNEVTYGPVLNVMCKSGQ 243
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
A+ +LR M E+ + A YS II CK+ + A + EM KG D+ Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C+ R + L ++M+ R +SP T+ L++++ +G+ + L E++Q+G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+P+ +TYN+LI G C R +EA++++ M DPD ++++ +I+G+ +
Sbjct: 364 --------IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ EL EM SL ++N T+++LV +C K E+A KL
Sbjct: 416 ANRIDDGLELFREM---------------SLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 304 RYQA---QYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
+ + PD VSY +LL+GL L +F + IY I+I
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNG--ELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTML--------------------HRNYRPE 399
C ++ +L ++G V ARA + M+ + P+
Sbjct: 519 CNASKVDDAWDLFCSLPLKG-VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577
Query: 400 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYC---DERYNEMSW 456
YN+LI H + A ++ +EM GF + +V +I L D+ + +M
Sbjct: 578 ELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637
Query: 457 VIRNTLR 463
R +L+
Sbjct: 638 TTRASLK 644
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 185/437 (42%), Gaps = 53/437 (12%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
V+L+ M P + + + E + + + M KG++ + S +I+
Sbjct: 73 VDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINC 132
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
FC+ +++ A +++ G PD + L+ LC + R+ EA +L M+ G P
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
T +TLV CL G+ S L D +++ G F P+ VTY +++ +C +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETG--------FQPNEVTYGPVLNVMCKSGQT 244
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK------------ 260
A+E+LR M E + D V YS +I G + L AF L EM+ K
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 261 --ETCWPLDQDTNESLVKDL------SNHDTFSSLVNDYCAEDK---AEMALKLRYQAQY 309
C D L++D+ N TFS L++ + E K A+ LK Q
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 310 LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSV 368
P++++Y L++G K+ A +++ I C P + ++ILI C N
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC--DPDIMTFNILINGYCKANRIDDG 422
Query: 369 VE-------------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 409
+E LV+GF G + A + M+ R RP+ Y +L+
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 410 HCIGGNVHKAYDMYKEM 426
C G + KA +++ ++
Sbjct: 483 LCDNGELEKALEIFGKI 499
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 16/249 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
DPD +T+N LI+ C+A + + +EL+ +M +R + N TY +++ FC
Sbjct: 400 DPDIMTFNILINGYCKANRIDDG-------LELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++E A + + M + + P SY ++ C N E+ KALE+ ++ + D+ Y
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++I +C+ ++ +A DLF + L+G+ R Y+ ++ C K SK L ++ ++
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G +P +TYN LI A E++ M P +VS ++
Sbjct: 573 G--------HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVINML 623
Query: 243 RIRELRKAF 251
EL K+F
Sbjct: 624 SSGELDKSF 632
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 219/513 (42%), Gaps = 64/513 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE-LSPNETTYRCMIRLFCDRN 62
PD +TYN LI C+ K E+Y V E L P+ TY +I +C
Sbjct: 284 PDVITYNNLIYGLCKNSKFQE--------AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
V+ A I+ G P +Y +I C E +AL + E L KGI P+V Y
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI+ L +Q +LEA L EM +G+ P +T++ LV C G S L +I K
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G+ P + T+N LIHG + + ALEIL M + +DPD +Y+++++G
Sbjct: 456 GYFP--------DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
+ + E M +K C P N TF+ L+ C K + AL
Sbjct: 508 KTSKFEDVMETYKTMVEK-GCAP--------------NLFTFNILLESLCRYRKLDEALG 552
Query: 303 LRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
L + + PD+V++ L++G K A L A+ ++ S Y+I+I
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS-SSTPTYNIIIH- 610
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
F + V A + M+ R P+G Y L++ C GNV+
Sbjct: 611 --------------AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRS----------CNLND 469
Y EM+ GF+ + ++ +I L ++R E + +I ++ C+++
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDK 716
Query: 470 SEQLK---ILDEIDPERCIIYALLDVLAEKAMD 499
E +L+++ + CI Y ++L + D
Sbjct: 717 KEVAAPKLVLEDLLKKSCITYYAYELLFDGLRD 749
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 192/428 (44%), Gaps = 45/428 (10%)
Query: 19 AEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG 78
A KN+ V ++ +M + P +Y ++ + D ++A + M ++G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 79 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 138
++P S++ + FCK AL + M +G +V AY ++ + E
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 139 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 198
+LF +ML G+S T++ L+ C KG+ + L D+VI++G L P+L T
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL--------PNLFT 253
Query: 199 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 258
YN I GLC D A+ ++ + E PD ++Y+ +I G + + ++A E+
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA-EVY---- 308
Query: 259 QKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVS 315
L + NE L D T+++L+ YC ++A ++ A ++PD +
Sbjct: 309 -------LGKMVNEGLEPD---SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 316 YCLLLNGL-HKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKG 374
Y L++GL H+ T+R L LF P+ I+Y+ LI KG
Sbjct: 359 YRSLIDGLCHEGETNR---ALALFNEALGKGIKPNVILYNTLI---------------KG 400
Query: 375 FRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCH 434
+G++ EAA+ + M + PE +N+L+ C G V A + K M+ G+
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 435 MFSVLALI 442
+F+ LI
Sbjct: 461 IFTFNILI 468
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 162/366 (44%), Gaps = 53/366 (14%)
Query: 3 DPDCVTYNTLISAACE-----------AEKNHNLSIP-----------------YVRIVE 34
+PD TYNTLI+ C+ + N +P R +
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
L+++ + + PN Y +I+ ++ + EA + M+EKGL P +++ +++ C
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K + A + M+ KG FPD+ + +LI Q ++ A ++ ML G+ P
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 214
TY++L+ C +F V +++KG +P+L T+N L+ LC +++ DE
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKG--------CAPNLFTFNILLESLCRYRKLDE 549
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 274
AL +L M ++PD V++ +I GF + +L A+ L +M E
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM--------------EEA 595
Query: 275 VKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRF 331
K S+ T++ +++ + + MA KL + PD +Y L+++G K
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 332 ATRLLL 337
+ LL
Sbjct: 656 GYKFLL 661
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
DPD TYN+L++ C+ K + ++E Y M + +PN T+ ++ C
Sbjct: 492 VDPDVYTYNSLLNGLCKTSK-------FEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHA 120
+++EA+G+L M K ++P A ++ +I FCKN ++ A + +M + +
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPT 604
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y ++I + + A LFQEM+ R + P G TY +V+ +C G + + E++
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 233
+ GF+ PSL T +I+ LC R EA I+ M + L P+ V+
Sbjct: 665 ENGFI--------PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 122/324 (37%), Gaps = 53/324 (16%)
Query: 130 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 189
+ ++ EA ++F+ M P +Y+ ++ G F + + + +G
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI----- 142
Query: 190 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 249
+P + ++ + C RP AL +L M + + V+Y V+ GF +
Sbjct: 143 ---TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199
Query: 250 AFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR---YQ 306
+EL +M L TF+ L+ C + + KL +
Sbjct: 200 GYELFGKMLASGVSLCLS---------------TFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 307 AQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLT----IPSYIIYDILIEK-CA 361
LP+ +Y L + GL ++ A R++ CL P I Y+ LI C
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMV------GCLIEQGPKPDVITYNNLIYGLCK 298
Query: 362 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 421
N++F+ EA M++ P+ YN LI +C GG V A
Sbjct: 299 NSKFQ----------------EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 422 MYKEMLHYGFVCHMFSVLALIKAL 445
+ + + GFV F+ +LI L
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGL 366
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 223/508 (43%), Gaps = 54/508 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TYN LI+ C+ K V + + L PN +Y +I+ +C
Sbjct: 343 PDVATYNILINRLCKEGKKE-------VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A +L MAE+G P +Y +I + M A+ MKV+++D+G+ PD Y +
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS---KVFHLQDEVI 180
L+ LC R L A+ LF EML R + P Y TL++ + G+F KVF L +
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLS---V 512
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+KG +V +NA+I G C DEAL + M E L PD+ +YS +I G
Sbjct: 513 EKG--------VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 300
+ + +++ A ++ M +K C P N T++SL+N +C + +MA
Sbjct: 565 YVKQQDMATAIKIFRYM-EKNKCKP--------------NVVTYTSLINGFCCQGDFKMA 609
Query: 301 LKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
+ + Q +P+ V+Y L+ L K+ +S + + ++ +P+ + ++ L+
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKE-SSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Query: 358 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVH 417
+ V+ G G + + M + A YN + C+ G V
Sbjct: 669 QGFVKKTSGKVLAEPDGSN-HGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVK 727
Query: 418 KAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDS------E 471
A +M+ GF S A++ +C N W RN + CNL +
Sbjct: 728 TACMFQDKMVKKGFSPDPVSFAAILHG-FC-VVGNSKQW--RN-MDFCNLGEKGLEVAVR 782
Query: 472 QLKILDEIDPERCIIYA--LLDVLAEKA 497
++L++ P+ I A +L + EKA
Sbjct: 783 YSQVLEQHLPQPVICEASTILHAMVEKA 810
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 199/480 (41%), Gaps = 60/480 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD + N+L+S ++ + + ++Y +MC R S + + +++ C+ +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDAR-------KVYDEMCDRGDSVDNYSTCILVKGMCNEGK 220
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VE ++ KG P+ Y+ II +CK ++ A + E+ KG P + +G
Sbjct: 221 VEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGT 280
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I C + + + L E+ RG+ + +++A G + D G
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG------YKVDPAESIG 334
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
++ P + TYN LI+ LC + + A+ L + L P+ +SY+ +I + +
Sbjct: 335 WI--IANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDL--SNHDTFSSLVNDYCAEDKAEMAL 301
+E A +L L+M ++ C P D T L+ L S H +D M +
Sbjct: 393 SKEYDIASKLLLQMAER-GCKP-DIVTYGILIHGLVVSGH-----------MDDAVNMKV 439
Query: 302 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC- 360
KL PD+ Y +L++GL K T RF LLF + +P +Y LI+
Sbjct: 440 KL-IDRGVSPDAAIYNMLMSGLCK--TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFI 496
Query: 361 -------ANNEFKSVVE------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGA 401
A F VE ++KGF G+++EA + M + P+
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Query: 402 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYC-------DERYNEM 454
Y+ +I + ++ A +++ M ++ + +LI C +E + EM
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 200/447 (44%), Gaps = 45/447 (10%)
Query: 45 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
+PN +Y +I C+ R+EEA G+ M EKG P +Y+ +I C + KA
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 105 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
+ EM+ +G P+VH Y +LI LC ++ EA + ++M+ + P TY+ L+ YC
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 165 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
G F L V++K + P++ T+N L+ GLC +P +A+ +L+ M +
Sbjct: 383 KDGRVVPAFELL-TVMEK-------RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 225 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTF 284
L PD VSY+ +I G R + A++L M+ C+ ++ D TF
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN----CFDIEPDCL-----------TF 479
Query: 285 SSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIV 341
++++N +C + KA++A L L + D V+ L++G+ K +R A +L +
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Query: 342 AHCLTIPSY--IIYDILIEKCANNE-------------FKSVV---ELVKGFRMRGLVNE 383
LT P +I D+L + C E SVV LV G G +
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 384 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 443
+ R + M P Y ++I C G V +A + M G + + ++K
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 444 ALYCDERYNEMSWVIRNTL-RSCNLND 469
+ + + +R + R LND
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELND 686
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 186/453 (41%), Gaps = 59/453 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V+Y+ LI CE + L QM + P+ TY +I+ CDR
Sbjct: 264 PNSVSYSILIHGLCEVGRLE-------EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+++A + M +G P+ +Y+ +I C++ ++ +A + +M+ IFP V Y
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C R++ A +L M R P RT++ L+E C G+ K HL ++ G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
SP +V+YN LI GLC + A ++L M ++PD ++++A+I+ F +
Sbjct: 437 --------LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS------------------------ 279
+ A M +K LD+ T +L+ +
Sbjct: 489 QGKADVASAFLGLMLRKGI--SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 280 -NHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLF 338
+ + +++ C + L + +P V+Y L++GL + + R+L
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 339 YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 398
++ CL P+ Y I+I G G V EA + M P
Sbjct: 607 MKLSGCL--PNVYPYTIII---------------NGLCQFGRVEEAEKLLSAMQDSGVSP 649
Query: 399 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
Y +++ + G + +A + + M+ G+
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 181/444 (40%), Gaps = 76/444 (17%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V+YN LI C + +++ Y +L M ++ P+ T+ +I FC + +
Sbjct: 439 PDIVSYNVLIDGLC---REGHMNTAY----KLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A L LM KG+S + + +I CK + AL + ++ I H+ +
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ +L ++ E + ++ G+ P TY TLV+ G+ + F + + + G
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 184 FLP----YYV-----------------------TSFSPSLVTYNALIHGLCFFQRPDEAL 216
LP Y + + SP+ VTY ++ G + D AL
Sbjct: 612 CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRE--------------LRKA-----FELKLEM 257
E +R M E + ++ YS+++ GF ++ LR+ EL +
Sbjct: 672 ETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVV 731
Query: 258 DQ-------------KETCWPLDQDTNESLVKDLSNHDTF-----SSLVNDYCAEDKAEM 299
+Q C D + LV+++ F ++ YC++ K
Sbjct: 732 EQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTK 791
Query: 300 ALK---LRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYII--YD 354
++ L ++ ++P S+CL++ GL K+ + A L++ + ++ + S ++ +
Sbjct: 792 CMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVE 851
Query: 355 ILIEKCANNEFKSVVELVKGFRMR 378
L+E + V++LV R
Sbjct: 852 CLMEGDETGDCSEVIDLVDQLHCR 875
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 132/336 (39%), Gaps = 56/336 (16%)
Query: 141 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF-LPYYVTSFSPSLVTY 199
++ M G G Y T+V A C G ++++ GF L ++ +
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGT-------- 234
Query: 200 NALIHGLCFFQRPDEALEILRGMP-EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 258
+L+ G C +AL++ M E+ P+ VSYS +I G + L +AF LK +M
Sbjct: 235 -SLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 259 QKETCWPLDQDTNESLVKDL----------------------SNHDTFSSLVNDYCAEDK 296
+K C P T L+K L N T++ L++ C + K
Sbjct: 294 EK-GCQP-STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 297 AEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIY 353
E A + + + P ++Y L+NG K +P++ +
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR-----------------VVPAFELL 394
Query: 354 DILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG 413
++ ++ ++ EL++G G +A ML P+ YN+LI C
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Query: 414 GNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDE 449
G+++ AY + M + + A+I A +C +
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINA-FCKQ 489
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 204/494 (41%), Gaps = 74/494 (14%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VT ++L++ C ++ V L QM V E PN T+ +I N
Sbjct: 147 EPDIVTLSSLLNGYCHGKR-------ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ EAV ++ M +G P +Y +++ CK ++ AL + +M I DV Y
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+I LC+ + + +A +LF EM +G+ P TY++L+ C G +S L ++I++
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 183 GFLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEA 215
P VT S P + TY++LI+G C R DEA
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
+ M P+ V+Y+ +I GF + + + + EL EM Q+
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL------------- 426
Query: 276 KDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRFA 332
+ N T+++L+ +MA K+ + PD ++Y +LL+GL K +
Sbjct: 427 --VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG--KLE 482
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIE---KCANNE----------FKSV-------VELV 372
L++F + P Y+I+IE K E K V ++
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 373 KGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
GF +GL EA M P YN LI G+ + ++ KEM GFV
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 433 CHMFSVLALIKALY 446
++ +I L+
Sbjct: 603 GDASTISMVINMLH 616
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 179/414 (43%), Gaps = 37/414 (8%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
V+L+ +M P+ + ++ N+ + + + M +S SY+ +I+
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
FC+ ++ AL + +M+ G PD+ L+ CH +R+ EA L +M + P
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
T++TL+ L + S+ L D ++ +G P L TY +++GLC
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARG--------CQPDLFTYGTVVNGLCKRGDI 236
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
D AL +L+ M + ++ D V Y+ +I + + A L EMD K P + T
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRP-NVVTYN 294
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
SL++ L N+ +S A L + + P+ V++ L++ K+ A
Sbjct: 295 SLIRCLCNYGRWSD----------ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 392
+L YD +I++ + + + L+ GF M ++EA + M+
Sbjct: 345 EKL-----------------YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 393 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
++ P YN LI C V + ++++EM G V + + LI+ L+
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 198/471 (42%), Gaps = 76/471 (16%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P V +N L+SA + K + ++ L +M +S + +Y +I FC R++
Sbjct: 78 PSIVEFNKLLSAIAKMNK-------FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + G P + S +++ +C K + +A+ + +M P+ +
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNT 190
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI L + EA L M+ RG P TY T+V C +G+ L + ++KG
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK-MEKG 249
Query: 184 FLPYYVTSFS----------------------------PSLVTYNALIHGLCFFQRPDEA 215
+ V ++ P++VTYN+LI LC + R +A
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
+L M E ++P+ V++SA+I F + +L +A +L EM ++ +D D
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS----IDPDIF---- 361
Query: 276 KDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
T+SSL+N +C D+ A+ +L P+ V+Y L+ G K R
Sbjct: 362 -------TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK--AKRVE 412
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEKC--------ANNEFKSVVE------------LV 372
+ LF ++ + + + Y+ LI+ A FK +V L+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 373 KGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
G G + +A + + P+ YN++I C G V +D++
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 195/431 (45%), Gaps = 52/431 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +T+ TLI HN + V +V+ +M R PN TY ++ C R
Sbjct: 188 PDTITFTTLIHGLFL----HNKASEAVALVD---RMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A +L M + + YS +I CK + AL + EM +KG+ P+V Y
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC+ R +A L +M+ R ++P T++ L++A+ +G+ + L DE+I++
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR- 359
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
S P + TY++LI+G C R DEA + M P+ V+Y+ +I+GF +
Sbjct: 360 -------SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+ + + EL EM Q+ + N T+++L++ + D A+M
Sbjct: 413 AKRIDEGVELFREMSQRGL---------------VGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
K P+ ++Y LL+GL K + +++F + P+ Y+I+IE
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNG--KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
C + + +L ++G+ +P+ +YN +I C G +A
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGV----------------KPDVIIYNTMISGFCRKGLKEEA 559
Query: 420 YDMYKEMLHYG 430
++++M G
Sbjct: 560 DALFRKMREDG 570
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 200/470 (42%), Gaps = 74/470 (15%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P +N L+SA + +K + ++ L +M +S N TY +I FC R++
Sbjct: 83 PSIFEFNKLLSAIAKMKK-------FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + G P + S +++ +C K + A+ + +M++ G PD +
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV---- 179
LI L + EA L M+ RG P TY +V C +G+ F+L +++
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 180 IQKGFLPYYVT-----------------------SFSPSLVTYNALIHGLCFFQRPDEAL 216
I+ + Y P+++TY++LI LC ++R +A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 276
+L M E ++P+ V+++A+I F + +L +A +L EM ++ +D D
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS----IDPDIF----- 366
Query: 277 DLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAT 333
T+SSL+N +C D+ A+ +L P+ V+Y L+NG K R
Sbjct: 367 ------TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK--AKRIDE 418
Query: 334 RLLLFYIVAHCLTIPSYIIYDILI------EKCANNE--FKSVVE------------LVK 373
+ LF ++ + + + Y LI C N + FK +V L+
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 374 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
G G + +A + + P YN++I C G V +D++
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 183/428 (42%), Gaps = 48/428 (11%)
Query: 42 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 101
R S YR ++R ++++A+G+ M + P +++++S K K+
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 102 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
+ + +M GI +++ Y +LI C + ++ A L +M+ G P T +L+
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 162 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 221
YC S L D++++ G + P +T+ LIHGL + EA+ ++
Sbjct: 164 GYCHGKRISDAVALVDQMVEMG--------YRPDTITFTTLIHGLFLHNKASEAVALVDR 215
Query: 222 MPEMLLDPDEVSYSAVISGFRRIRELRKAFEL--KLEMDQKET------------CWPLD 267
M + P+ V+Y V++G + ++ AF L K+E + E C
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 268 QDTNESLVKDLSNHD------TFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCL 318
+D +L ++ N T+SSL++ C ++ A +L + + P+ V++
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 319 LLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMR 378
L++ K+ A +L YD +I++ + + + L+ GF M
Sbjct: 336 LIDAFVKEGKLVEAEKL-----------------YDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 379 GLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSV 438
++EA + M+ ++ P YN LI C + + ++++EM G V + +
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 439 LALIKALY 446
LI +
Sbjct: 439 TTLIHGFF 446
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
DPD TY++LI+ C ++ ++ M ++ PN TY +I FC
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAK-------HMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R++E V + R M+++GL + +Y+ +I F + ++ A + +M+ G+ P++ Y
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+ LC +L +A +F+ + M P TY+ ++E C G+ + L
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL------- 527
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
F + P ++ YN +I G C +EA + R M E PD
Sbjct: 528 -FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 42/187 (22%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTYNTLI+ C+A++ VEL+ +M R L N TY +I F
Sbjct: 398 PNVVTYNTLINGFCKAKRID-------EGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM------------------ 105
+ A + + M G+ P+ +Y+ ++ CKN ++ KA+ +
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 106 ---------KVE--------MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
KVE + KG+ PDV Y +I C + EA LF++M G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 149 MSPGGRT 155
P T
Sbjct: 571 PLPDSGT 577
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 200/449 (44%), Gaps = 56/449 (12%)
Query: 4 PDCVTYNTLISAACEAEK-NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD T+NTL++ C+A H + I V + E Y P+ TY +I C
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY--------DPDVYTYNSVISGLCKLG 344
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
V+EAV +L M + SP+ +Y+ +IS CK ++ +A E+ + KGI PDV +
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LIQ LC R A +LF+EM +G P TY+ L+++ C KG+ + ++ ++
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G + S++TYN LI G C + EA EI M + + V+Y+ +I G
Sbjct: 465 G--------CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
+ R + A +L +DQ E D T++SL+ +C + A
Sbjct: 517 KSRRVEDAAQL------------MDQMIMEGQKPD---KYTYNSLLTHFCRGGDIKKAAD 561
Query: 303 LRYQAQYL----PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE 358
+ QA PD V+Y L++GL K A++LL S + I +
Sbjct: 562 I-VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL-----------RSIQMKGINLT 609
Query: 359 KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV-YNLLIFDHCIGGN-V 416
A N +++G + EA ML +N P AV Y ++ C GG +
Sbjct: 610 PHAYN------PVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 417 HKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
+A D E+L GFV S+ L + L
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 210/469 (44%), Gaps = 52/469 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+N LI A C A H L P + ++E M L P+E T+ +++ + +
Sbjct: 187 PDVSTFNVLIKALCRA---HQLR-PAILMLE---DMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYG 122
++ A+ I M E G S S + I+ FCK + AL EM ++ G FPD + +
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+ LC + A ++ ML G P TY++++ C GE + + D++I +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
SP+ VTYN LI LC + +EA E+ R + + PD +++++I G
Sbjct: 360 --------DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
R R A EL EM K C P + T++ L++ C++ K + AL
Sbjct: 412 LTRNHRVAMELFEEMRSK-GCEP--------------DEFTYNMLIDSLCSKGKLDEALN 456
Query: 303 LRYQAQY---LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
+ Q + ++Y L++G K +R A + + H ++ S + Y+ LI+
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEE-IFDEMEVHGVSRNS-VTYNTLIDG 514
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
L K R V +AA+ D M+ +P+ YN L+ C GG++ KA
Sbjct: 515 -----------LCKSRR----VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRN-TLRSCNL 467
D+ + M G + + LI L R S ++R+ ++ NL
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 174/367 (47%), Gaps = 36/367 (9%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VT+ TLI HN + V +++ +M R P+ TY ++ C R
Sbjct: 181 PDTVTFTTLIHGLFL----HNKASEAVALID---RMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + + YS +I CK + AL + EM +KG+ P+V Y
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC+ R +A L +M+ R ++P T+ L++A+ KG+ K L +E+I++
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR- 352
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
S P++ TY++LI+G C R EA ++L M P+ V+Y+ +I+GF +
Sbjct: 353 -------SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+ + K EL EM Q+ + N T+++L++ + D A+M
Sbjct: 406 AKRVDKGMELFREMSQRGL---------------VGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
K P+ ++Y +LL+GL K + A +++F + P Y+I+IE
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNG--KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Query: 360 CANNEFK 366
C ++K
Sbjct: 509 CKAGKWK 515
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 173/417 (41%), Gaps = 43/417 (10%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+ L+ M P+ + ++ N+ + + M G+S + +Y+ +I+
Sbjct: 63 IGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINC 122
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
FC+ + AL + +M+ G PD+ L+ CH R+ +A L +M+ G P
Sbjct: 123 FCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPD 182
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
T+ TL+ L + S+ L D ++Q+G P LVTY A+++GLC
Sbjct: 183 TVTFTTLIHGLFLHNKASEAVALIDRMVQRG--------CQPDLVTYGAVVNGLCKRGDT 234
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
D AL +L M ++ + V YS VI + R A L EM+ K
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV---------- 284
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATS 329
N T+SSL++ C + A +L + + P+ V++ L++ KK
Sbjct: 285 -----RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 330 RFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARD 389
A +L Y+ +I++ + + L+ GF M + EA + +
Sbjct: 340 VKAEKL-----------------YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 390 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
M+ ++ P YN LI C V K ++++EM G V + + LI +
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 187/446 (41%), Gaps = 69/446 (15%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P + ++ L+SA + K + ++ +M + +S N TY +I FC +R
Sbjct: 76 PSIIEFSKLLSAIAKMNK-------FDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 128
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + G P + + +++ FC + A+ + +M++ G PD +
Sbjct: 129 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 188
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV---- 179
LI L + EA L M+ RG P TY +V C +G+ +L +++
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 180 IQKGFLPYYVT-----------------------SFSPSLVTYNALIHGLCFFQRPDEAL 216
I+ + Y P+++TY++LI LC + R +A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 276
+L M E ++P+ V++SA+I F + +L KA +L EM ++ +D
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS----ID--------- 355
Query: 277 DLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAT 333
N T+SSL+N +C D+ A+ L+L + LP+ V+Y L+NG K R
Sbjct: 356 --PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK--AKRVDK 411
Query: 334 RLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLH 393
+ LF ++ + + + Y LI GF + A M+
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIH---------------GFFQARDCDNAQMVFKQMVS 456
Query: 394 RNYRPEGAVYNLLIFDHCIGGNVHKA 419
P YN+L+ C G + KA
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 15/205 (7%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ VT++ LI A + K V+ +LY +M R + PN TY +I FC +
Sbjct: 320 NPNLVTFSALIDAFVKKGK-------LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R+ EA +L LM K P+ +Y+ +I+ FCK K + K +E+ EM +G+ + Y
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYT 432
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI R A+ +F++M+ G+ P TY+ L++ C G+ +K + E +Q+
Sbjct: 433 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM-VVFEYLQR 491
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLC 207
++ P + TYN +I G+C
Sbjct: 492 -------STMEPDIYTYNIMIEGMC 509
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
DP+ TY++LI+ C ++ ++ M ++ PN TY +I FC
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAK-------QMLELMIRKDCLPNVVTYNTLINGFCKAK 407
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
RV++ + + R M+++GL + +Y+ +I F + ++ A + +M+ G+ P++ Y
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 467
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
+L+ LC +L +A +F+ + M P TY+ ++E C G++
Sbjct: 468 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 182/394 (46%), Gaps = 45/394 (11%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P+ T+ ++ FC NR+ +A ++ LM + G P+ Y+ +I CKN E+ ALE+
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
EM KG+ DV Y L+ LC+ R +A + ++M+ R ++P T+ L++ +
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
+G + L E+IQ +S P+ VTYN++I+GLC R +A + M
Sbjct: 259 QGNLDEAQELYKEMIQ--------SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 226 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 285
P+ V+Y+ +ISGF + R + + +L Q+ +C + D T++
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLF----QRMSCEGFNADIF-----------TYN 355
Query: 286 SLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVA 342
+L++ YC K +AL + + PD +++C+LL+GL + L+ F +
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC--VNGEIESALVKFDDMR 413
Query: 343 HCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 401
+ Y+I+I C ++ + EL + G+ +P+
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV----------------KPDAR 457
Query: 402 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHM 435
Y ++I C G +A ++ + M G +C M
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRMKEEGIICQM 491
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 159/337 (47%), Gaps = 33/337 (9%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ V YNTLI C KN L+I +EL ++M + L + TY ++ C
Sbjct: 173 EPNVVVYNTLIDGLC---KNGELNIA----LELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R +A +LR M ++ ++P +++ +I F K + +A E+ EM+ + P+ Y
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+I LC RL +A+ F M +G P TY+TL+ +C F + DE + K
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC-------KFRMVDEGM-K 337
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
F F+ + TYN LIHG C + AL+I M + PD +++ ++ G
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
E+ A +K + D +E+ E + ++ ++ +++ C DK E A +
Sbjct: 398 VNGEIESAL-VKFD-DMRES---------EKYIGIVA----YNIMIHGLCKADKVEKAWE 442
Query: 303 L--RYQAQYL-PDSVSYCLLLNGLHKKATSRFATRLL 336
L R + + PD+ +Y +++ GL K R A L+
Sbjct: 443 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 15/258 (5%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VT+ LI K NL ELY +M + PN TY +I C
Sbjct: 243 NPDVVTFTALIDVFV---KQGNLD----EAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R+ +A LMA KG P+ +Y+ +IS FCK + + + +++ M +G D+ Y
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI C +L A D+F M+ R ++P T+ L+ C+ GE D++ +
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
Y+ +V YN +IHGLC + ++A E+ +P + PD +Y+ +I G
Sbjct: 416 ---EKYI-----GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 243 RIRELRKAFELKLEMDQK 260
+ R+A EL M ++
Sbjct: 468 KNGPRREADELIRRMKEE 485
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 152/370 (41%), Gaps = 52/370 (14%)
Query: 83 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 142
+D ++ + F + A + EM+ P + + L+ + RR Q
Sbjct: 36 SDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQ 95
Query: 143 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 202
+M L G+S ++ L+ +C S + ++++ G+ PS+VT+ +L
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY--------EPSIVTFGSL 147
Query: 203 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK-- 260
+HG C R +A ++ M + +P+ V Y+ +I G + EL A EL EM++K
Sbjct: 148 LHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
Query: 261 ------------ETCWPLDQDTNESLVKDLSNHD------TFSSLVNDYCAE---DKAEM 299
C+ +++D+ TF++L++ + + D+A+
Sbjct: 208 GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE 267
Query: 300 ALKLRYQAQYLPDSVSYCLLLNGL--HKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
K Q+ P++V+Y ++NGL H + T F ++A P+ + Y+ LI
Sbjct: 268 LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT----FDLMASKGCFPNVVTYNTLI 323
Query: 358 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVH 417
GF +V+E + M + + YN LI +C G +
Sbjct: 324 S---------------GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 418 KAYDMYKEML 427
A D++ M+
Sbjct: 369 VALDIFCWMV 378
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 214/508 (42%), Gaps = 80/508 (15%)
Query: 4 PDCVTYNTLISAACEAEK--------NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMI 55
PD VT+NTL+ C ++ + + ++ V L+ QM L+P T+ +I
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 56 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 115
C RV EA ++ M KGL +Y I++ CK + AL + +M + I
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 116 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 175
PDV Y +I LC +A+ LF EML +G++P TY+ +++ +C G +S L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 176 QDEVIQKGFLPYYVT---------------------------SFSPSLVTYNALIHGLCF 208
++I++ P +T P VTYN++I+G C
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 268
R D+A + M +++ PD V+++ +I + R + + + +L E+ ++
Sbjct: 414 HNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL------ 463
Query: 269 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHK 325
++N T+++L++ +C D A L + PD+++ +LL G +
Sbjct: 464 ---------VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 326 KATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVEL------------- 371
+ L LF ++ + Y+I+I C ++ +L
Sbjct: 515 --NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 372 ------VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 425
+ GF + +++A M + P+ + YN LI G + K+ ++ E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 426 MLHYGFVCHMFSVLALIKALYCDERYNE 453
M GF F++ ++ L D R ++
Sbjct: 633 MRSNGFSGDAFTI-KMVADLITDGRLDK 659
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 120/239 (50%), Gaps = 19/239 (7%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD +T+N LISA+ + K +L +M R + P+ TY MI FC N
Sbjct: 363 NPDVLTFNALISASVKEGK-------LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R ++A + LMA SP +++ II +C+ K + + +++ E+ +G+ + Y
Sbjct: 416 RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI C L A+DLFQEM+ G+ P T + L+ +C + + L EVIQ
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQ- 529
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
++ V YN +IHG+C + DEA ++ +P ++PD +Y+ +ISGF
Sbjct: 530 ------MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 199/462 (43%), Gaps = 84/462 (18%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+ LY +M +R + N ++ +I+ FCD +++ ++ + + G P +++ ++
Sbjct: 126 ISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHG 185
Query: 93 FCKNKEMGKALEM-----------KVEMLDK----GIFPDVHAYGLLIQLLCHQRRLLEA 137
C + +AL + V + D+ G+ P V + LI LC + R+LEA
Sbjct: 186 LCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 138 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------- 190
L +M+ +G+ TY T+V C G+ +L ++ + P V
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 191 --------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
+P++ TYN +I G C F R +A +LR M E ++PD
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD-------- 282
++++A+IS + +L +A +L EM + C D T S++ H+
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHR--CIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 283 ----------TFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATS 329
TF+++++ YC + + ++L + + ++ +Y L++G + +
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC-EVDN 482
Query: 330 RFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARAR 388
A + L +++H + P I +IL+ C N + + +EL + +M +
Sbjct: 483 LNAAQDLFQEMISHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKI------DL 535
Query: 389 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
DT+ YN++I C G V +A+D++ + +G
Sbjct: 536 DTV----------AYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 15/222 (6%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
M PD VT+NT+I C A++ ++L ++ R L N TTY +I FC+
Sbjct: 427 MASPDVVTFNTIIDVYCRAKR-------VDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+ + A + + M G+ P + + ++ FC+N+++ +ALE+ + I D A
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y ++I +C ++ EA DLF + + G+ P +TY+ ++ +C K S L ++
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 222
G P TYN LI G D+++E++ M
Sbjct: 600 DNG--------HEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 151/364 (41%), Gaps = 55/364 (15%)
Query: 87 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 146
+++I F + A+ + +M + I +++++ +LI+ C +L + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 147 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV-------TSFSPSLVTY 199
G P T++TL+ CL+ S+ L +++ GFL +P ++T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 200 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 259
N LI+GLC R EA ++ M L D V+Y +++G ++ + + A L +M+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME- 288
Query: 260 KETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSY 316
E+ +K + +S++++ C + A+ + P+ +Y
Sbjct: 289 ------------ETHIK--PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 317 CLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFR 376
+++G A RLL +IE+ N + + L+
Sbjct: 335 NCMIDGFCSFGRWSDAQRLL-----------------RDMIEREINPDVLTFNALISASV 377
Query: 377 MRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMF 436
G + EA + D MLHR P+ YN +I+ C H +D K HMF
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC----KHNRFDDAK---------HMF 424
Query: 437 SVLA 440
++A
Sbjct: 425 DLMA 428
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 211/466 (45%), Gaps = 60/466 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTYN++++ C ++ + S+ ++L +M R + + TY +I C
Sbjct: 191 PDVVTYNSIVNGIC---RSGDTSLA----LDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A+ + + M KG+ +Y+ ++ CK + + +M+ + I P+V + +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ + + +L EA +L++EM+ RG+SP TY+TL++ YC++ S+ ++ D +++
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR-- 361
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
SP +VT+ +LI G C +R D+ +++ R + + L + V+YS ++ GF +
Sbjct: 362 ------NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+++ A EL EM + ++ D+ T+ L++ C K E AL++
Sbjct: 416 SGKIKLAEELFQEM------------VSHGVLPDVM---TYGILLDGLCDNGKLEKALEI 460
Query: 304 RYQAQYLP---DSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTI-PSYIIYDILIEK 359
Q V Y ++ G+ K A L + C + P+ + Y ++I
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL---FCSLPCKGVKPNVMTYTVMIS- 516
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
G +G ++EA M P YN LI H G++ +
Sbjct: 517 --------------GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSC 465
+ +EM GF S+ +I L +S + R TLR C
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDML--------LSAMKRLTLRYC 600
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 174/407 (42%), Gaps = 49/407 (12%)
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
++A+ + + M P +SR S + K+ L+ ++ GI +++ ++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I C + A + +++ G P T++TL++ L+G+ S+ L D +++ G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG- 188
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
P +VTYN++++G+C AL++LR M E + D +YS +I R
Sbjct: 189 -------CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMAL 301
+ A L EM+ K S+V T++SLV C K + L
Sbjct: 242 GCIDAAISLFKEMETK--------GIKSSVV-------TYNSLVRGLCKAGKWNDGALLL 286
Query: 302 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-C 360
K + +P+ +++ +LL+ K+ + A L I P+ I Y+ L++ C
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG--ISPNIITYNTLMDGYC 344
Query: 361 -------ANN------------EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 401
ANN + + L+KG+ M V++ + + R
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 402 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCD 448
Y++L+ C G + A ++++EM+ +G + + + L+ L CD
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL-CD 450
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 191/457 (41%), Gaps = 56/457 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P V ++ SA K NL + + + +EL ++ N T MI FC +
Sbjct: 86 PSLVDFSRFFSAIART-KQFNLVLDFCKQLEL------NGIAHNIYTLNIMINCFCRCCK 138
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
A +L + + G P +++ +I ++ +A+ + M++ G PDV Y
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ +C A DL ++M R + TY T++++ C G L E+ KG
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
S+VTYN+L+ GLC + ++ +L+ M + P+ ++++ ++ F +
Sbjct: 259 --------IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS-NHDTFSSLVNDYCAEDK---AEM 299
+L++A EL EM + + +S N T+++L++ YC +++ A
Sbjct: 311 EGKLQEANELYKEM----------------ITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 300 ALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
L L + + PD V++ L+ G R + +F ++ + + + Y I
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYC--MVKRVDDGMKVFRNISKRGLVANAVTYSI---- 408
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
LV+GF G + A M+ P+ Y +L+ C G + KA
Sbjct: 409 -----------LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 420 Y----DMYKEMLHYGFVCHMFSVLALIKALYCDERYN 452
D+ K + G V + + + K ++ +N
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 193/431 (44%), Gaps = 51/431 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ TYN +++ C+ + +IVE L P+ TY +I +C R
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVE-------AGLDPDFFTYTSLIMGYCQRKD 268
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A + M KG + +Y+ +I C + + +A+++ V+M D FP V Y +
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI+ LC R EA +L +EM G+ P TY L+++ C + +F K L ++++KG
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ P+++TYNALI+G C ++A++++ M L P+ +Y+ +I G+ +
Sbjct: 389 LM--------PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+ KA + +M ++ K L + T++SL++ C D A
Sbjct: 441 -SNVHKAMGVLNKMLER---------------KVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
L L +PD +Y +++ L K A L +D L +K
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL-----------------FDSLEQKG 527
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 420
N L+ G+ G V+EA + ML +N P +N LI C G + +A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 421 DMYKEMLHYGF 431
+ ++M+ G
Sbjct: 588 LLEEKMVKIGL 598
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 198/451 (43%), Gaps = 54/451 (11%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
DPD TY +LI C+ + +L + +++++M ++ NE Y +I C
Sbjct: 250 DPDFFTYTSLIMGYCQRK---DLDSAF----KVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R++EA+ + M + P +Y+ +I C ++ +AL + EM + GI P++H Y
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LI LC Q + +AR+L +ML +G+ P TY+ L+ YC +G + + + +
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
SP+ TYN LI G C +A+ +L M E + PD V+Y+++I G
Sbjct: 423 --------KLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
R A+ L M+ + LV D T++S+++ C + E A
Sbjct: 474 RSGNFDSAYRLLSLMNDR------------GLVPD---QWTYTSMIDSLCKSKRVEEACD 518
Query: 303 L---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
L Q P+ V Y L++G K A +L + +CL P+ + ++ LI
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL--PNSLTFNALIHG 576
Query: 360 -CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 418
CA+ + K EA + M+ +P + +LI G+
Sbjct: 577 LCADGKLK----------------EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 419 AYDMYKEMLHYGFVCHMFSVLALIKALYCDE 449
AY +++ML G + I+ YC E
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQT-YCRE 650
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 195/464 (42%), Gaps = 63/464 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ TYN LI C++ + + + ++M R++ P+ TY +I C
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGV--------LNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A +L LM ++GL P +Y+ +I CK+K + +A ++ + KG+ P+V Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C ++ EA + ++ML + P T++ L+ C G+ + L++++++ G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 184 FLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEAL 216
P T P TY I C R +A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 276
+++ M E + PD +YS++I G+ + + AF++ L+ + C P Q T SL+K
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV-LKRMRDTGCEP-SQHTFLSLIK 715
Query: 277 DL---------SNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 327
L + ++ N + E+ K+ + P++ SY L+ G+ +
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM-VEHSVTPNAKSYEKLILGICEVG 774
Query: 328 TSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARA 387
R A ++ ++ PS ++++ L+ C +L K NEAA+
Sbjct: 775 NLRVAEKVFDHMQRNEGIS-PSELVFNALLSCCC--------KLKKH-------NEAAKV 818
Query: 388 RDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
D M+ + P+ +LI G + +++ +L G+
Sbjct: 819 VDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 174/415 (41%), Gaps = 49/415 (11%)
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V+E + M E + P+ +Y+++++ +CK + +A + ++++ G+ PD Y
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C ++ L A +F EM L+G Y L+ C+ + L
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL-------- 310
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
F+ P++ TY LI LC +R EAL +++ M E + P+ +Y+ +I
Sbjct: 311 FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA--- 300
+ KA EL +M +K + N T+++L+N YC E A
Sbjct: 371 QCKFEKARELLGQMLEKGL---------------MPNVITYNALINGYCKRGMIEDAVDV 415
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE-K 359
++L + P++ +Y L+ G K S + + + +P + Y+ LI+ +
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCK---SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 360 CANNEFKSVVELVKGFRMRGL-------------------VNEAARARDTMLHRNYRPEG 400
C + F S L+ RGL V EA D++ + P
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 401 AVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMS 455
+Y LI +C G V +A+ M ++ML + + + ALI L D + E +
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 151/380 (39%), Gaps = 56/380 (14%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELS----PNETTYRCMIRL 57
+P+ V Y LI C+A K V+ H M + LS PN T+ +I
Sbjct: 528 VNPNVVMYTALIDGYCKAGK-----------VDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 58 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 117
C +++EA + M + GL P + + +I R K+ + A +ML G PD
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 118 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 177
H Y IQ C + RLL+A D+ +M G+SP TY +L++ Y G+ + F +
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 178 EVIQKGFLPYYVTSFS-----------------PSLVTYNALIHGLCFFQRPDEALEILR 220
+ G P T S P L + ++ D +E+L
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEF-------DTVVELLE 749
Query: 221 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE--SLVKDL 278
M E + P+ SY +I G + LR A ++ M + E P + N S L
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 279 SNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLF 338
H+ + +V+D +LP S +L+ GL+KK T +F
Sbjct: 810 KKHNEAAKVVDDMIC-------------VGHLPQLESCKVLICGLYKKGEKERGTS--VF 854
Query: 339 YIVAHCLTIPSYIIYDILIE 358
+ C + + I+I+
Sbjct: 855 QNLLQCGYYEDELAWKIIID 874
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 177/423 (41%), Gaps = 71/423 (16%)
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
C+ + E+K +++ + Y L+ L + E + ++ EML + P
Sbjct: 165 LCRKMNKDERFELKYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
TY+ +V YC G + ++++ G P TY +LI G C +
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAG--------LDPDFFTYTSLIMGYCQRKDL 269
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL------ 266
D A ++ MP +EV+Y+ +I G R + +A +L ++M E C+P
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE-CFPTVRTYTV 328
Query: 267 -------DQDTNES--LVKDLS------NHDTFSSLVNDYCAEDKAEMALKLRYQ---AQ 308
+ +E+ LVK++ N T++ L++ C++ K E A +L Q
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 309 YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSV 368
+P+ ++Y L+NG K+ A + +++ + + ++
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVD-----------------VVELMESRKLSPNTRTY 431
Query: 369 VELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLH 428
EL+KG+ + V++A + ML R P+ YN LI C GN AY + M
Sbjct: 432 NELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 429 YGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQLKILDEIDPERCIIYA 488
G V ++ ++I +L +R E +C+L DS + K ++P + A
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEE----------ACDLFDSLEQK---GVNPNVVMYTA 537
Query: 489 LLD 491
L+D
Sbjct: 538 LID 540
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 113/281 (40%), Gaps = 35/281 (12%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
T PD TY T I C + + ++ +M +SP+ TY +I+ + D
Sbjct: 633 TKPDAHTYTTFIQTYCREGR-------LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIIS-----RFCKNK-------------EMGKAL 103
+ A +L+ M + G P ++ +I ++ K K E +
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR-GMSPGGRTYDTLVEA 162
E+ +M++ + P+ +Y LI +C L A +F M G+SP ++ L+
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 163 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 222
C + ++ + D++I G L P L + LI GL + + + +
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHL--------PQLESCKVLICGLYKKGEKERGTSVFQNL 857
Query: 223 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 263
+ DE+++ +I G + + L +AF + +K C
Sbjct: 858 LQCGYYEDELAWKIIIDGVGK-QGLVEAFYELFNVMEKNGC 897
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 199/444 (44%), Gaps = 53/444 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+ TLI HN + V +V+ QM R P+ TY ++ C R
Sbjct: 186 PDTFTFTTLIHGLFL----HNKASEAVALVD---QMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A+ +L M + + ++ II CK + + A+++ EM KGI P+V Y
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC+ R +A L ML + ++P T++ L++A+ +G+ + L +E+IQ+
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR- 357
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
S P +TYN LI+G C R DEA ++ + M P+ +Y+ +I+GF +
Sbjct: 358 -------SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+ + EL EM Q+ + N T+++++ + D A+M
Sbjct: 411 CKRVEDGVELFREMSQRGL---------------VGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
K + D ++Y +LL+GL + + T L++F + + IY+ +IE
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLC--SYGKLDTALVIFKYLQKSEMELNIFIYNTMIE-- 511
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 420
G G V EA D + +P+ YN +I C + +A
Sbjct: 512 -------------GMCKAGKVGEAW---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 421 DMYKEMLHYGFVCHMFSVLALIKA 444
D++++M G + + + LI+A
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 196/470 (41%), Gaps = 74/470 (15%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P V +N L+SA + K + ++ L QM +S + TY I FC R++
Sbjct: 81 PSIVEFNKLLSAVAKMNK-------FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + G P + S +++ +C +K + A+ + +M++ G PD +
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD------ 177
LI L + EA L +M+ RG P TY T+V C +G+ +L +
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 178 ---------------------EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEAL 216
EV F P++VTYN+LI+ LC + R +A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 276
+L M E ++P+ V+++A+I F + +L +A +L EM Q+ +D DT
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS----IDPDT------ 363
Query: 277 DLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAT 333
T++ L+N +C D+A+ K LP+ +Y L+NG K R
Sbjct: 364 -----ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK--CKRVED 416
Query: 334 RLLLFYIVAHCLTIPSYIIYDILIE--------KCANNEFKSVVE------------LVK 373
+ LF ++ + + + Y +I+ A FK +V L+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 374 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
G G ++ A + +YN +I C G V +A+D++
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 182/408 (44%), Gaps = 42/408 (10%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRI-VELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
+ V +NT+I + C+ +V + V+L+ +M + + PN TY +I C+ R
Sbjct: 257 NVVIFNTIIDSLCKYR--------HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+A +L M EK ++P+ +++ +I F K ++ +A ++ EM+ + I PD Y L
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C RL EA+ +F+ M+ + P +TY+TL+ +C L E+ Q+G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRP--DEALEILRGMPEMLLDPDEVSYSAVISGF 241
+ + VTY +I G FFQ D A + + M + D ++YS ++ G
Sbjct: 429 LV--------GNTVTYTTIIQG--FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
+L A + + + E N +++++ C K A
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMEL---------------NIFIYNTMIEGMCKAGKVGEAW 523
Query: 302 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCA 361
L PD V+Y +++GL K + A LF + T+P+ Y+ LI
Sbjct: 524 DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADD--LFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 362 NN-EFKSVVELVKGFRMRGLVNEAARAR--DTMLHRNYRPEGAVYNLL 406
+ + + EL+K R G V +A+ MLH + R + + N+L
Sbjct: 582 RDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH-DGRLDKSFLNML 628
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 24/258 (9%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVE---LYHQMCVRELSPNETTYRCMIRLFC 59
DPD +TYN LI+ C HN R+ E ++ M ++ PN TY +I FC
Sbjct: 360 DPDTITYNLLINGFCM----HN------RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
RVE+ V + R M+++GL + +Y+ II F + + A + +M+ + D+
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
Y +L+ LC +L A +F+ + M Y+T++E C G+ + + L
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---- 525
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
+ S P +VTYN +I GLC + EA ++ R M E P+ +Y+ +I
Sbjct: 526 -------FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 240 GFRRIRELRKAFELKLEM 257
R + + EL EM
Sbjct: 579 ANLRDCDRAASAELIKEM 596
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 159/378 (42%), Gaps = 53/378 (14%)
Query: 76 EKGLSPHADSYSRII-SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 134
E+ + + Y I+ +R ++ A+++ +M+ FP + + L+ + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 135 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 194
L ++M G+S TY + +C + + S + ++++ G + P
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG--------YEP 151
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
+VT ++L++G C +R +A+ ++ M EM PD +++ +I G + +A L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 255 LEMDQKETCWPLDQDTNESLVKDL----------------------SNHDTFSSLVNDYC 292
+M Q+ C P D T ++V L +N F+++++ C
Sbjct: 212 DQMVQR-GCQP-DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 293 AEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPS 349
E+A+ L + + P+ V+Y L+N L A+RLL
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL------------- 316
Query: 350 YIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 409
++EK N + L+ F G + EA + + M+ R+ P+ YNLLI
Sbjct: 317 ----SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 410 HCIGGNVHKAYDMYKEML 427
C+ + +A M+K M+
Sbjct: 373 FCMHNRLDEAKQMFKFMV 390
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 193/419 (46%), Gaps = 51/419 (12%)
Query: 20 EKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL 79
++N + + YV Y +M R++ PN T+ +I C ++ +A ++ M G
Sbjct: 200 KENRSADVEYV-----YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254
Query: 80 SPHADSYSRIISRFCK---NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 136
SP+ SY+ +I +CK N +M KA + EM++ + P++ + +LI L
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 137 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 196
+ +F+EML + + P +Y++L+ C G+ S+ ++D+++ G P+L
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG--------VQPNL 366
Query: 197 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 256
+TYNALI+G C EAL++ + P Y+ +I + ++ ++ F LK E
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 257 MDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ--AQYLPDSV 314
M++ E +V D+ T++ L+ C E A KL Q ++ LPD V
Sbjct: 427 MER------------EGIVPDVG---TYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLV 471
Query: 315 SYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKG 374
++ +L+ G +K SR A +L ++ P ++ Y+I++ KG
Sbjct: 472 TFHILMEGYCRKGESRKAA--MLLKEMSKMGLKPRHLTYNIVM---------------KG 514
Query: 375 FRMRGLVNEAARARDTM-LHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
+ G + A R M R R A YN+L+ + G + A + EML G V
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 177/371 (47%), Gaps = 34/371 (9%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V+YNTLI C+ N + + + +M ++SPN TT+ +I F +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKM----YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN 311
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ ++ + + M ++ + P+ SY+ +I+ C ++ +A+ M+ +M+ G+ P++ Y
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C L EA D+F + +G P R Y+ L++AYC G+ F L++E+ ++G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ P + TYN LI GLC + A ++ + L PD V++ ++ G+ R
Sbjct: 432 IV--------PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR 482
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
E RKA L EM K P H T++ ++ YC E + A +
Sbjct: 483 KGESRKAAMLLKEM-SKMGLKP--------------RHLTYNIVMKGYCKEGNLKAATNM 527
Query: 304 RYQAQ----YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
R Q + + SY +LL G +K A +LL ++ L +P+ I Y+I+ E+
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN-MLLNEMLEKGL-VPNRITYEIVKEE 585
Query: 360 CANNEFKSVVE 370
+ F +E
Sbjct: 586 MVDQGFVPDIE 596
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 140/315 (44%), Gaps = 47/315 (14%)
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+I LL + R + +++EM+ R + P T++ ++ A C G+ +K + +++
Sbjct: 194 LMIALL-KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM--- 249
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPD---EALEILRGMPEMLLDPDEVSYSAVIS 239
V SP++V+YN LI G C +A +L+ M E + P+ +++ +I
Sbjct: 250 -----KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
Query: 240 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEM 299
GF + L + ++ EM LDQD +++ +++SL+N C K
Sbjct: 305 GFWKDDNLPGSMKVFKEM--------LDQDVKPNVI-------SYNSLINGLCNGGKISE 349
Query: 300 ALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDIL 356
A+ +R A P+ ++Y L+NG K + A L +F V +P+ +Y++L
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA--LDMFGSVKGQGAVPTTRMYNML 407
Query: 357 IEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNV 416
I+ + G +++ ++ M P+ YN LI C GN+
Sbjct: 408 ID---------------AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 417 HKAYDMYKEMLHYGF 431
A ++ ++ G
Sbjct: 453 EAAKKLFDQLTSKGL 467
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 193/429 (44%), Gaps = 52/429 (12%)
Query: 42 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 101
R + N + Y +IR++ +++++ I RLM G +P + + I+ K+ E
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 102 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
EML + I PDV + +LI +LC + ++ L Q+M G +P TY+T++
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 162 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 221
YC KG F L D + KG + TYN LIH LC R + +LR
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKG--------VDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328
Query: 222 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS-N 280
M + ++ P+EV+Y+ +I+GF ++ A +L NE L LS N
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQL----------------LNEMLSFGLSPN 372
Query: 281 HDTFSSLVNDYCAEDKAEMALKLRY--QAQYL-PDSVSYCLLLNGLHKKATSRFATRLLL 337
H TF++L++ + +E + ALK+ Y +A+ L P VSY +LL+GL K A A
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG--- 429
Query: 338 FYI-VAHCLTIPSYIIYDILIEKCANNEF--KSVV------------------ELVKGFR 376
FY+ + I Y +I+ N F ++VV L+ GF
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489
Query: 377 MRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMF 436
G A + P G +Y+ LI++ C G + +A +Y+ M+ G F
Sbjct: 490 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549
Query: 437 SVLALIKAL 445
+ L+ +L
Sbjct: 550 TFNVLVTSL 558
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 187/445 (42%), Gaps = 50/445 (11%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P T N ++ + ++ ++ V + +M R++ P+ T+ +I + C
Sbjct: 195 NPSVYTCNAILGSVVKSGED-------VSVWSFLKEMLKRKICPDVATFNILINVLCAEG 247
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
E++ +++ M + G +P +Y+ ++ +CK A+E+ M KG+ DV Y
Sbjct: 248 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYN 307
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LI LC R+ + L ++M R + P TY+TL+ + +G+ L +E++
Sbjct: 308 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 367
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G SP+ VT+NALI G EAL++ M L P EVSY ++ G
Sbjct: 368 G--------LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEM 299
+ E A + M + C T++ +++ C D+A +
Sbjct: 420 KNAEFDLARGFYMRMKRNGVC---------------VGRITYTGMIDGLCKNGFLDEAVV 464
Query: 300 ALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
L + PD V+Y L+NG K RF T + + P+ IIY LI
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCK--VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
C RM G + EA R + M+ + + +N+L+ C G V +A
Sbjct: 523 CC--------------RM-GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKA 444
+ + M G + + S LI
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLING 592
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 202/519 (38%), Gaps = 103/519 (19%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
M P+ VTYNTLI+ K + +L ++M LSPN T+ +I
Sbjct: 333 MIHPNEVTYNTLINGFSNEGK-------VLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE--MGKALEMKV----------- 107
+EA+ + +M KGL+P SY ++ CKN E + + M++
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 108 ----------------------EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 145
EM GI PD+ Y LI C R A+++ +
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 146 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 205
G+SP G Y TL+ C G + + + +I +G + T+N L+
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG--------HTRDHFTFNVLVTS 557
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ------ 259
LC + EA E +R M + P+ VS+ +I+G+ E KAF + EM +
Sbjct: 558 LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 617
Query: 260 --------KETCWPLDQDTNESLVKDL----SNHDT--FSSLVNDYCAEDKAEMALKL-- 303
K C E +K L + DT +++L+ C A+ L
Sbjct: 618 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 677
Query: 304 -RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCL--TIPSYIIYDILIEKC 360
Q LPDS +Y L++GL +K + A +LF A +P+ ++Y ++
Sbjct: 678 EMVQRSILPDSYTYTSLISGLCRKGKTVIA---ILFAKEAEARGNVLPNKVMYTCFVDGM 734
Query: 361 -ANNEFKSVV-------------------ELVKGFRMRGLVNEAARARDTMLHRNYRPEG 400
++K+ + ++ G+ G + + M ++N P
Sbjct: 735 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 794
Query: 401 AVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV-----CH 434
YN+L+ + +V ++ +Y+ ++ G + CH
Sbjct: 795 TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 194/471 (41%), Gaps = 60/471 (12%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D V YNTL++A C K+ NL+ + V L+ +M R + P+ TY +I C + +
Sbjct: 652 DTVMYNTLLTAMC---KSGNLA----KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 704
Query: 65 EEAVGILRLMAEKG-LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
A+ + +G + P+ Y+ + K + + + +M + G PD+
Sbjct: 705 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 764
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I ++ + DL EM + P TY+ L+ Y + + S F L +I G
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 824
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
LP +T S L+ G+C + L+IL+ ++ D +++ +IS
Sbjct: 825 ILPDKLTCHS--------LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 876
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS------------------ 285
E+ AF+L M LD+DT +++V L+ + F
Sbjct: 877 NGEINWAFDLVKVMTSLGI--SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934
Query: 286 ----SLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRFATRLLLF 338
L+N C + A ++ + + P +V+ ++ L K + AT LL F
Sbjct: 935 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 994
Query: 339 YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 398
+ +P+ + L+ C N G V EA R M + +
Sbjct: 995 MLKMK--LVPTIASFTTLMHLCCKN---------------GNVIEALELRVVMSNCGLKL 1037
Query: 399 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDE 449
+ YN+LI C G++ A+++Y+EM GF+ + + ALI+ L E
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE 1088
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 193/497 (38%), Gaps = 90/497 (18%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRI----------------------------VE 34
DPD VTY+ LI+ C+ + RI +
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 534
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
+Y M + + + T+ ++ C +V EA +R M G+ P+ S+ +I+ +
Sbjct: 535 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 594
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+ E KA + EM G P YG L++ LC L EA + + +
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 654
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC------- 207
Y+TL+ A C G +K L E++Q+ LP TY +LI GLC
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP--------DSYTYTSLISGLCRKGKTVI 706
Query: 208 --FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
F + EA RG + P++V Y+ + G + + + + +MD
Sbjct: 707 AILFAKEAEA----RGN----VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD------- 751
Query: 266 LDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNG 322
N D+ T +++++ Y K E L P+ +Y +LL+G
Sbjct: 752 -----NLGHTPDIV---TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 803
Query: 323 LHKKATSRFATRLLLFYIVAHCLTIPSYII-YDILIEKCANNEFKSVVELVKGFRMRGLV 381
K+ +T LL+ + +P + + +++ C +N + ++++K F RG+
Sbjct: 804 YSKR--KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV- 860
Query: 382 NEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLAL 441
E R +N+LI C G ++ A+D+ K M G + A+
Sbjct: 861 -EVDRY--------------TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAM 905
Query: 442 IKALYCDERYNEMSWVI 458
+ L + R+ E V+
Sbjct: 906 VSVLNRNHRFQESRMVL 922
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 154/337 (45%), Gaps = 33/337 (9%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ TYN L+ K ++S ++ LY + + + P++ T ++ C+ N
Sbjct: 792 PNLTTYNILLHGY---SKRKDVSTSFL----LYRSIILNGILPDKLTCHSLVLGICESNM 844
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E + IL+ +G+ +++ +IS+ C N E+ A ++ M GI D
Sbjct: 845 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 904
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ +L R E+R + EM +G+SP R Y L+ C G+ F +++E+I
Sbjct: 905 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P P+ V +A++ L + DEA +LR M +M L P S++ ++ +
Sbjct: 965 ICP-------PN-VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 1016
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ +A EL++ M +N L DL +++ L+ CA+ +A +L
Sbjct: 1017 NGNVIEALELRVVM------------SNCGLKLDLVSYNV---LITGLCAKGDMALAFEL 1061
Query: 304 RYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLL 337
+ + +L ++ +Y L+ GL + T+ ++L
Sbjct: 1062 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1098
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 165/415 (39%), Gaps = 58/415 (13%)
Query: 4 PDCVTYNTLISAAC-------------EAEKNHNL---SIPYVRIVE------------- 34
PD TY +LIS C EAE N+ + Y V+
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
QM +P+ T MI + ++E+ +L M + P+ +Y+ ++ +
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K K++ + + ++ GI PD L+ +C L + + + RG+
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL--VTYNALIHGLCFFQRP 212
T++ L+ C GE + F L +TS SL T +A++ L R
Sbjct: 866 TFNMLISKCCANGEINWAFDLVK----------VMTSLGISLDKDTCDAMVSVLNRNHRF 915
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
E+ +L M + + P+ Y +I+G R+ +++ AF +K EM + C P
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP--NVAES 973
Query: 273 SLVKDLSNHDTFSSLVNDYCAE-DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRF 331
++V+ L+ C + D+A + L+ + + +P S+ L++ K
Sbjct: 974 AMVRALAK-----------CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 1022
Query: 332 ATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAA 385
A L + ++++C + Y++LI CA + EL + + G + A
Sbjct: 1023 ALELRV--VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1075
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 207/493 (41%), Gaps = 79/493 (16%)
Query: 4 PDCVTYNTLISAACEAEK--------NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMI 55
PD VT+NTL+ C ++ + + ++ V L+ QM L+P T+ +I
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 56 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 115
C RV EA ++ M KGL +Y I++ CK + AL + +M + I
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 116 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 175
PDV Y +I LC +A+ LF EML +G++P TY+ +++ +C G +S L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 176 QDEVIQKGFLPYYVT---------------------------SFSPSLVTYNALIHGLCF 208
++I++ P +T P VTYN++I+G C
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 268
R D+A + M +++ PD V+++ +I + R + + + +L E+ ++
Sbjct: 414 HNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL------ 463
Query: 269 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHK 325
++N T+++L++ +C D A L + PD+++ +LL G +
Sbjct: 464 ---------VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 326 KATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVEL------------- 371
+ L LF ++ + Y+I+I C ++ +L
Sbjct: 515 --NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 372 ------VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 425
+ GF + +++A M + P+ + YN LI G + K+ ++ E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 426 MLHYGFVCHMFSV 438
M GF F++
Sbjct: 633 MRSNGFSGDAFTI 645
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 120/239 (50%), Gaps = 19/239 (7%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD +T+N LISA+ + K +L +M R + P+ TY MI FC N
Sbjct: 363 NPDVLTFNALISASVKEGK-------LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R ++A + LMA SP +++ II +C+ K + + +++ E+ +G+ + Y
Sbjct: 416 RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI C L A+DLFQEM+ G+ P T + L+ +C + + L EVIQ
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQ- 529
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
++ V YN +IHG+C + DEA ++ +P ++PD +Y+ +ISGF
Sbjct: 530 ------MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 196/455 (43%), Gaps = 84/455 (18%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+ LY +M +R + N ++ +I+ FCD +++ ++ + + G P +++ ++
Sbjct: 126 ISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHG 185
Query: 93 FCKNKEMGKALEM-----------KVEMLDK----GIFPDVHAYGLLIQLLCHQRRLLEA 137
C + +AL + V + D+ G+ P V + LI LC + R+LEA
Sbjct: 186 LCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 138 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV-------- 189
L +M+ +G+ TY T+V C G+ +L ++ + P V
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 190 -------------------TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
+P++ TYN +I G C F R +A +LR M E ++PD
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD-------- 282
++++A+IS + +L +A +L EM + C D T S++ H+
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHR--CIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 283 ----------TFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATS 329
TF+++++ YC + + ++L + + ++ +Y L++G + +
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC-EVDN 482
Query: 330 RFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARAR 388
A + L +++H + P I +IL+ C N + + +EL + +M +
Sbjct: 483 LNAAQDLFQEMISHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKI------DL 535
Query: 389 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
DT+ YN++I C G V +A+D++
Sbjct: 536 DTV----------AYNIIIHGMCKGSKVDEAWDLF 560
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 15/222 (6%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
M PD VT+NT+I C A++ ++L ++ R L N TTY +I FC+
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVD-------EGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+ + A + + M G+ P + + ++ FC+N+++ +ALE+ + I D A
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y ++I +C ++ EA DLF + + G+ P +TY+ ++ +C K S L ++
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 222
G P TYN LI G D+++E++ M
Sbjct: 600 DNG--------HEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 151/364 (41%), Gaps = 55/364 (15%)
Query: 87 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 146
+++I F + A+ + +M + I +++++ +LI+ C +L + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 147 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV-------TSFSPSLVTY 199
G P T++TL+ CL+ S+ L +++ GFL +P ++T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 200 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 259
N LI+GLC R EA ++ M L D V+Y +++G ++ + + A L +M+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME- 288
Query: 260 KETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSY 316
E+ +K + +S++++ C + A+ + P+ +Y
Sbjct: 289 ------------ETHIK--PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 317 CLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFR 376
+++G A RLL +IE+ N + + L+
Sbjct: 335 NCMIDGFCSFGRWSDAQRLL-----------------RDMIEREINPDVLTFNALISASV 377
Query: 377 MRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMF 436
G + EA + D MLHR P+ YN +I+ C H +D K HMF
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC----KHNRFDDAK---------HMF 424
Query: 437 SVLA 440
++A
Sbjct: 425 DLMA 428
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/540 (23%), Positives = 208/540 (38%), Gaps = 126/540 (23%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ YN LI + C+ K H + L+ +M L PN+ TY +I +FC R +
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAEL-------LFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 64 VEEAVGILRLMAEKGLS-----------------------------------PHADSYSR 88
++ A+ L M + GL P +Y+
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
++ +C ++ KAL + EM KGI P ++ + L+ L + +A LF EM
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL------------ 196
+ P TY+ ++E YC +G+ SK F E+ +KG +P S+ P +
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP-DTYSYRPLIHGLCLTGQASEA 596
Query: 197 ----------------VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+ Y L+HG C + +EAL + + M + +D D V Y +I G
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 241 FRRIRELRKAFELKLEM-----------------------DQKETCWPLDQDTNESLVKD 277
+ ++ + F L EM D KE D NE V
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV-- 714
Query: 278 LSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATR 334
N T+++++N C ++AE+ +P+ V+Y L+ L K
Sbjct: 715 -PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV 773
Query: 335 LLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRG------------LV 381
L I+ L + Y++LI C + EL+ RM G ++
Sbjct: 774 ELHNAILKGLLA--NTATYNMLIRGFCRQGRIEEASELIT--RMIGDGVSPDCITYTTMI 829
Query: 382 NEAARARD---------TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
NE R D +M + RP+ YN LI C+ G + KA ++ EML G +
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 184/444 (41%), Gaps = 50/444 (11%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+EL++ M + P+ Y +IR C+ + A ++ M G + Y+ +I
Sbjct: 212 MELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDG 271
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
CK +++ +A+ +K ++ K + PDV Y L+ LC + ++ EML SP
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
+LVE +G+ + +L V+ G SP+L YNALI LC ++
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV--------SPNLFVYNALIDSLCKGRKF 383
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM---DQKETCWPLDQD 269
EA + M ++ L P++V+YS +I F R +L A EM K + +P
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP---- 439
Query: 270 TNESLVKDLSNHDTFSSLVNDYCA---EDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKK 326
++SL+N +C AE + + P V+Y L+ G K
Sbjct: 440 --------------YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 327 ATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAAR 386
A RL Y + K + L+ G GL+ +A +
Sbjct: 486 GKINKALRL-----------------YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 387 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
+ M N +P YN++I +C G++ KA++ KEM G V +S LI L
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 447 CDERYNEMSWVIRNTLR-SCNLND 469
+ +E + + +C LN+
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNE 612
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 201/465 (43%), Gaps = 55/465 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTY TL+ C+ ++ + +E+ +M SP+E ++ R +
Sbjct: 295 PDVVTYCTLVYGLCKVQE-------FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+EEA+ +++ + + G+SP+ Y+ +I CK ++ +A + M G+ P+ Y +
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI + C + +L A EM+ G+ Y++L+ +C G+ S E+I K
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK- 466
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P++VTY +L+ G C + ++AL + M + P +++ ++SG R
Sbjct: 467 -------KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+R A +L EM + W + N T++ ++ YC E KA
Sbjct: 520 AGLIRDAVKLFNEMAE----WNVK-----------PNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
LK + +PD+ SY L++GL + A + +C + I Y L+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL--NEICYTGLLHGF 622
Query: 360 CANNEFKSVVELVKGFRMRG----------LVNEAARARDTML---------HRNYRPEG 400
C + + + + + RG L++ + + +D L R +P+
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 401 AVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
+Y +I G+ +A+ ++ M++ G V + + A+I L
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 16/279 (5%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
D D V Y LI + + K+ L L +M R L P++ Y MI
Sbjct: 643 VDLDLVCYGVLIDGSLK-HKDRKL------FFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+EA GI LM +G P+ +Y+ +I+ CK + +A + +M P+ Y
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
G + +L ++ +L+G+ TY+ L+ +C +G + L +I
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
G SP +TY +I+ LC +A+E+ M E + PD V+Y+ +I G
Sbjct: 816 DGV--------SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 280
E+ KA EL+ EM ++ P ++ + + D S+
Sbjct: 868 CVAGEMGKATELRNEM-LRQGLIPNNKTSRTTTSNDTSS 905
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 175/390 (44%), Gaps = 43/390 (11%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P+ T ++ FC RNRV +AV ++ M E G P +Y+ II CK K + A +
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
E+ KGI P+V Y L+ LC+ R +A L +M+ + ++P TY L++A+
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
G+ + L +E+++ S P +VTY++LI+GLC R DEA ++ M
Sbjct: 273 NGKVLEAKELFEEMVR--------MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 226 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 285
D VSY+ +I+GF + + + +L EM Q+ +SN T++
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL---------------VSNTVTYN 369
Query: 286 SLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVA 342
+L+ + + A + Q + PD +Y +LL GL A
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA---------- 419
Query: 343 HCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 402
+I++ + ++ + + + +++G G V EA ++ + +P+
Sbjct: 420 -------LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 403 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
Y ++ C G +H+ +Y +M G +
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 37/329 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V YN +I + C+ ++ ++ + + ++ + + PN TY ++ C+ +R
Sbjct: 188 PDIVAYNAIIDSLCKTKRVND-------AFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+A +L M +K ++P+ +YS ++ F KN ++ +A E+ EM+ I PD+ Y
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC R+ EA +F M+ +G +Y+TL+ +C L E+ Q+G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRP--DEALEILRGMPEMLLDPDEVSYSAVISGF 241
+ + VTYN LI G FFQ D+A E M + PD +Y+ ++ G
Sbjct: 361 LV--------SNTVTYNTLIQG--FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
EL KA + +M ++E +D D T+++++ C K E A
Sbjct: 411 CDNGELEKALVIFEDMQKRE----MDLDIV-----------TYTTVIRGMCKTGKVEEAW 455
Query: 302 KLRYQAQ---YLPDSVSYCLLLNGLHKKA 327
L PD V+Y +++GL K
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
DPD VTY++LI+ C ++ + +++ M + + +Y +I FC
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEAN-------QMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
RVE+ + + R M+++GL + +Y+ +I F + ++ KA E +M GI PD+ Y
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+L+ LC L +A +F++M R M TY T++ C G+ + + L
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL------- 457
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLC 207
F + P +VTY ++ GLC
Sbjct: 458 -FCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 145/355 (40%), Gaps = 43/355 (12%)
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
++ ++ A+++ +M+ FP + + L+ + ++ L ++M + G+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 214
T++ ++ +C + S + ++++ G+ P VT +L++G C R +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGY--------EPDRVTIGSLVNGFCRRNRVSD 173
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 274
A+ ++ M E+ PD V+Y+A+I + + + AF+ E+++K
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI------------ 221
Query: 275 VKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRF 331
N T+++LVN C + A +L + + P+ ++Y LL+ K
Sbjct: 222 ---RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 332 ATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTM 391
A L F + P + Y L+ G + ++EA + D M
Sbjct: 279 AKEL--FEEMVRMSIDPDIVTYS---------------SLINGLCLHDRIDEANQMFDLM 321
Query: 392 LHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
+ + + YN LI C V +++EM G V + + LI+ +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 198/462 (42%), Gaps = 48/462 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTYNTLISA EL + M + SP TY +I C +
Sbjct: 268 PDIVTYNTLISAYSSKGLME-------EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E A + M GLSP + +Y ++ CK ++ + ++ +M + + PD+ +
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ L L +A F + G+ P Y L++ YC KG S +L++E++Q+G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ +VTYN ++HGLC + EA ++ M E L PD + + +I G +
Sbjct: 441 C--------AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN-DYCAEDKAEMALK 302
+ L+ A EL +M +K LD T +L+ D F + + D E A+M K
Sbjct: 493 LGNLQNAMELFQKMKEKRI--RLDVVTYNTLL------DGFGKVGDIDTAKEIWADMVSK 544
Query: 303 LRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCAN 362
+ LP +SY +L+N L K A R ++D +I K
Sbjct: 545 -----EILPTPISYSILVNALCSKGHLAEAFR-----------------VWDEMISKNIK 582
Query: 363 NEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDM 422
++KG+ G ++ + M+ + P+ YN LI+ N+ KA+ +
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 423 YKEM--LHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTL 462
K+M G V +F+ +++ + E V+R +
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 192/468 (41%), Gaps = 49/468 (10%)
Query: 16 ACEAEKNHNLSIPYVRIV-ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLM 74
AC A + I +V + +Y ++ + N T M+ C ++E+ L +
Sbjct: 202 ACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 75 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 134
EKG+ P +Y+ +IS + M +A E+ M KG P V+ Y +I LC +
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 135 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 194
A+++F EML G+SP TY +L+ C KG+ + +K F P
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET--------EKVFSDMRSRDVVP 373
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
LV +++++ D+AL + E L PD V Y+ +I G+ R + A L+
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 255 LEMDQ-------------------KETCWPLDQDTNESLVKDL-SNHDTFSSLVNDYCAE 294
EM Q ++ D+ NE + L + T + L++ +C
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 295 DKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYI 351
+ A++L + + D V+Y LL+G K A + + L P+ I
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL--PTPI 551
Query: 352 IYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHC 411
Y IL+ + +G + EA R D M+ +N +P + N +I +C
Sbjct: 552 SYSILVNALCS---------------KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 412 IGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 459
GN ++M+ GFV S LI +E ++ +++
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 5 DCVTYNTLISAAC------EAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLF 58
D VTYNT++ C EA+K L+++M R L P+ T +I
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADK-------------LFNEMTERALFPDSYTLTILIDGH 490
Query: 59 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 118
C ++ A+ + + M EK + +Y+ ++ F K ++ A E+ +M+ K I P
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 119 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 178
+Y +L+ LC + L EA ++ EM+ + + P +++++ YC G S ++
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 179 VIQKGFLPYYVT-----------------------------SFSPSLVTYNALIHGLCFF 209
+I +GF+P ++ P + TYN+++HG C
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 210 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
+ EA +LR M E ++PD +Y+ +I+GF L +AF + EM Q+
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 149/323 (46%), Gaps = 31/323 (9%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V Y LI C + +S+ E+ Q C ++ TY ++ C R
Sbjct: 408 PDNVIYTILIQGYC---RKGMISVAMNLRNEMLQQGCAMDV----VTYNTILHGLCKRKM 460
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ EA + M E+ L P + + + +I CK + A+E+ +M +K I DV Y
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ + A++++ +M+ + + P +Y LV A C KG ++ F + DE+I K
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK- 579
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ P+++ N++I G C + L M PD +SY+ +I GF R
Sbjct: 580 -------NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMA 300
+ KAF L +M++++ LV D+ T++S+++ +C +++ AE+
Sbjct: 633 EENMSKAFGLVKKMEEEQG----------GLVPDVF---TYNSILHGFCRQNQMKEAEVV 679
Query: 301 LKLRYQAQYLPDSVSYCLLLNGL 323
L+ + PD +Y ++NG
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGF 702
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 164/389 (42%), Gaps = 55/389 (14%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 106
N++ + +IR + ++ EA L+ KG + D+ + +I + + A +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
E+ G+ +V+ +++ LC ++ + ++ +G+ P TY+TL+ AY K
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G + F L + + KG FSP + TYN +I+GLC + + A E+ M
Sbjct: 284 GLMEEAFELMNAMPGKG--------FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT--- 283
L PD +Y +++ E C D E + D+ + D
Sbjct: 336 LSPDSTTYRSLL---------------------MEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 284 ---FSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLL 337
FSS+++ + DKA M +A +PD+V Y +L+ G +K A L
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR- 433
Query: 338 FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYR 397
++L + CA + + ++ G R ++ EA + + M R
Sbjct: 434 ---------------NEMLQQGCA-MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 398 PEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
P+ +LI HC GN+ A +++++M
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 9/185 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P ++Y+ L++A C K H ++ +M + + P MI+ +C
Sbjct: 548 PTPISYSILVNALCS--KGH-----LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM--KVEMLDKGIFPDVHAY 121
+ L M +G P SY+ +I F + + M KA + K+E G+ PDV Y
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
++ C Q ++ EA + ++M+ RG++P TY ++ + + ++ F + DE++Q
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Query: 182 KGFLP 186
+GF P
Sbjct: 721 RGFSP 725
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PDC++YNTLI E N+S + + ++ + L P+ TY ++ FC +N+
Sbjct: 618 PDCISYNTLIYGFVREE---NMSKAFGLVKKMEEEQG--GLVPDVFTYNSILHGFCRQNQ 672
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 117
++EA +LR M E+G++P +Y+ +I+ F + +A + EML +G PD
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 220/488 (45%), Gaps = 64/488 (13%)
Query: 3 DPDCVTYNTLISAAC-EAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
+PD VT++TLI+ C E + L + R+VE+ H+ P T ++ C
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALEL-VDRMVEMGHK-------PTLITLNALVNGLCLN 190
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+V +AV ++ M E G P+ +Y ++ CK+ + A+E+ +M ++ I D Y
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
++I LC L A +LF EM ++G Y TL+ +C G + L ++I+
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD--EALEILRGMPEMLLDPDEVSYSAVIS 239
+ +P +V ++ALI CF + EA E+ + M + + PD V+Y+++I
Sbjct: 311 R--------KITPDVVAFSALID--CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 240 GFRRIRELRKAFELKLEMDQKETCWPLDQDTN--------ESLVKD-------------L 278
GF + +L KA + L++ + C P + N +L+ D +
Sbjct: 361 GFCKENQLDKANHM-LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 279 SNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGL------------ 323
++ T+++L+ +C K E+A +L + + PD VSY +LL+GL
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 324 -HKKATSRFATRLLLFYIVAHCLTIPSYI--IYDILIE---KCANNEFKSVVELVKGFRM 377
K S+ + ++ I+ H + S + +D+ K + K+ ++ G
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 378 RGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFS 437
+G ++EA M + P G YN+LI H G+ K+ + +E+ GF +
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Query: 438 VLALIKAL 445
V ++ L
Sbjct: 600 VKMVVDML 607
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 183/437 (41%), Gaps = 53/437 (12%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
V+L+ +M P + + + + + + + + M KG++ + + S +I+
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
C+ +++ A +++ G PD + LI LC + R+ EA +L M+ G P
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
T + LV CL G+ S L D +++ G F P+ VTY ++ +C +
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETG--------FQPNEVTYGPVLKVMCKSGQT 228
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK------------ 260
A+E+LR M E + D V YS +I G + L AF L EM+ K
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 261 --ETCWPLDQDTNESLVKDLSNHD------TFSSLVNDYCAEDK---AEMALKLRYQAQY 309
C+ D L++D+ FS+L++ + E K AE K Q
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 310 LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSV 368
PD+V+Y L++G K+ A +L + C P+ ++ILI C N
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG--PNIRTFNILINGYCKANLIDDG 406
Query: 369 VELVKGFRMRGLVNE-------------------AARARDTMLHRNYRPEGAVYNLLIFD 409
+EL + +RG+V + A M+ R RP+ Y +L+
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 410 HCIGGNVHKAYDMYKEM 426
C G KA ++++++
Sbjct: 467 LCDNGEPEKALEIFEKI 483
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 206/463 (44%), Gaps = 51/463 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +T NTL++ C + K + ++VE Q PN TY ++ + C +
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQ-------PNAVTYGPVLNVMCKSGQ 243
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
A+ +LR M E+ + A YS II CK+ + A + EM KGI ++ Y +
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C+ R + L ++M+ R ++P T+ L++++ +G+ + L E+I +G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+P +TY +LI G C D+A +++ M DP+ +++ +I+G+ +
Sbjct: 364 --------IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ EL +M SL +++ T+++L+ +C K +A +L
Sbjct: 416 ANRIDDGLELFRKM---------------SLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 304 RYQA---QYLPDSVSYCLLLNGL-------------HKKATSRFATRLLLFYIVAHCLTI 347
+ + P+ V+Y +LL+GL K S+ + ++ I+ H +
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 348 PSYI--IYDILIE---KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 402
S + +D+ K K+ ++ G +G ++EA M + P+G
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 403 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
YN+LI H G+ K+ + +E+ GF ++ +I L
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/518 (22%), Positives = 239/518 (46%), Gaps = 61/518 (11%)
Query: 3 DPDCVTYNTLISAAC-EAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
+P+ +T++TLI+ C E + L + R+VE+ H+ P+ T ++ C
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALEL-VDRMVEMGHK-------PDLITINTLVNGLCLS 206
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+ EA+ ++ M E G P+A +Y +++ CK+ + A+E+ +M ++ I D Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
++I LC L A +LF EM ++G++ TY+ L+ +C G + L ++I+
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+ +P++VT++ LI + EA E+ + M + PD ++Y+++I GF
Sbjct: 327 R--------KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
+ L KA ++ +++ + C P N TF+ L+N YC ++ + L
Sbjct: 379 CKENHLDKANQM-VDLMVSKGCDP--------------NIRTFNILINGYCKANRIDDGL 423
Query: 302 KLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE 358
+L + + D+V+Y L+ G + A LF + P+ + Y IL++
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE--LFQEMVSRKVPPNIVTYKILLD 481
Query: 359 K-CANNEFKSVVELVKGFR--------------MRGLVNEAARARD------TMLHRNYR 397
C N E + +E+ + + G+ N A++ D ++ + +
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN-ASKVDDAWDLFCSLPLKGVK 540
Query: 398 PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWV 457
P YN++I C G + +A ++++M G ++ LI+A D + +
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 458 IRNTLRSCNLN-DSEQLKILDEIDPERCIIYALLDVLA 494
I L+ C + D+ +K++ ++ + + + LD+L+
Sbjct: 601 IEE-LKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 193/480 (40%), Gaps = 86/480 (17%)
Query: 46 PNETTYRC--MIRLFCDRN--------------RVEEAVGILRLMAEKGLSPHADSYSRI 89
PNE ++ C F DRN + ++A+ + R M P +SR+
Sbjct: 35 PNELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRL 94
Query: 90 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 149
S K K+ L + +M KGI +++ ++I C R+L A +++ G
Sbjct: 95 FSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY 154
Query: 150 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------------- 190
P T+ TL+ CL+G S+ L D +++ G P +T
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 191 --------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
P+ VTY +++ +C + A+E+LR M E + D V YS +I G
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 243 RIRELRKAFELKLEMDQKET--------------CWPLDQDTNESLVKDL------SNHD 282
+ L AF L EM+ K C D L++D+ N
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 283 TFSSLVNDYCAEDKAEMALKLRYQAQY---LPDSVSYCLLLNGLHKKATSRFATRLLLFY 339
TFS L++ + E K A +L + + PD+++Y L++G K+ A +++
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 340 IVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 398
+ C P+ ++ILI C N +EL + +RG+V +
Sbjct: 395 VSKGC--DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT-------------- 438
Query: 399 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVI 458
YN LI C G ++ A ++++EM+ ++ + L+ L CD +E + I
Sbjct: 439 --VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL-CDNGESEKALEI 495
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VT++ LI + K + ELY++M R ++P+ TY +I FC N
Sbjct: 313 PDVVTFSALIDVFVKEGK-------LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ EA + LM KG P +YS +I+ +CK K + + + E+ KG+ P+ Y
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ C +L A++LFQEM+ RG+ P TY L++ C GE +K + E +QK
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF-EKMQK- 483
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ + + YN +IHG+C + D+A + + + + PD V+Y+ +I G +
Sbjct: 484 ------SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSL 287
L +A L +M +++ C P D N + L SS+
Sbjct: 538 KGSLSEADMLFRKM-KEDGCTPDDFTYNILIRAHLGGSGLISSV 580
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 205/453 (45%), Gaps = 51/453 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTY +++ C++ N L++ +L+ +M R + + Y +I C
Sbjct: 208 PDEVTYGPVLNRLCKS-GNSALAL------DLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++A+ + M KG+ +YS +I C + + +M EM+ + I PDV +
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI + + +LLEA++L+ EM+ RG++P TY++L++ +C + + + D ++ KG
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P +VTY+ LI+ C +R D+ + + R + L P+ ++Y+ ++ GF +
Sbjct: 381 --------CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+L A EL EM + + S+V T+ L++ C + AL++
Sbjct: 433 SGKLNAAKELFQEM--------VSRGVPPSVV-------TYGILLDGLCDNGELNKALEI 477
Query: 304 --RYQAQYLPDSVS-YCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
+ Q + + Y ++++G+ S+ LF ++ P + Y+++I
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCN--ASKVDDAWSLFCSLSDKGVKPDVVTYNVMI--- 532
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 420
G +G ++EA M P+ YN+LI H G + +
Sbjct: 533 ------------GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 580
Query: 421 DMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
++ +EM GF S + ++ + D R ++
Sbjct: 581 ELIEEMKVCGFSADS-STIKMVIDMLSDRRLDK 612
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 172/385 (44%), Gaps = 45/385 (11%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P+ T+ ++ FC RV EAV ++ M E P + S +I+ C + +AL +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
M++ G PD YG ++ LC A DLF++M R + Y ++++ C
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
G F L +E+ KG +VTY++LI GLC + D+ ++LR M
Sbjct: 258 DGSFDDALSLFNEMEMKG--------IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 226 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS-NHDTF 284
+ PD V++SA+I F + +L +A EL NE + + ++ + T+
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKEL----------------YNEMITRGIAPDTITY 353
Query: 285 SSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIV 341
+SL++ +C E+ +A L PD V+Y +L+N K R + LF +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK--AKRVDDGMRLFREI 411
Query: 342 AHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 401
+ IP+ I Y+ LV GF G +N A M+ R P
Sbjct: 412 SSKGLIPNTITYN---------------TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 402 VYNLLIFDHCIGGNVHKAYDMYKEM 426
Y +L+ C G ++KA +++++M
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKM 481
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 167/403 (41%), Gaps = 48/403 (11%)
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+V +A+ + M + P ++R+ S + K+ L M GI D++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++I C +++LL A + G P T+ TLV +CL+G S+ L D +++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE- 168
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
P LVT + LI+GLC R EAL ++ M E PDEV+Y V++
Sbjct: 169 -------MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDT--NESLVKDLSNHD------------------ 282
+ A +L +M+++ + Q + +SL KD S D
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 283 TFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRFATRLLLFY 339
T+SSL+ C + K + K+ + +PD V++ L++ K+ A L
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 340 IVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 399
I P I Y+ LI+ GF ++EA + D M+ + P+
Sbjct: 342 ITRG--IAPDTITYNSLID---------------GFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 400 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI 442
Y++LI +C V +++E+ G + + + L+
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 114/249 (45%), Gaps = 16/249 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VTY+ LI++ C+A++ + + L+ ++ + L PN TY ++ FC
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDG-------MRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ A + + M +G+ P +Y ++ C N E+ KALE+ +M + + Y
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++I +C+ ++ +A LF + +G+ P TY+ ++ C KG S+ L ++ +
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G +P TYN LI ++E++ M D + VI
Sbjct: 555 G--------CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Query: 243 RIRELRKAF 251
R L K+F
Sbjct: 607 D-RRLDKSF 614
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/283 (18%), Positives = 116/283 (40%), Gaps = 43/283 (15%)
Query: 178 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 237
++++KG + +S + + ++Y + + ++A+++ M + P + ++ +
Sbjct: 17 QILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRL 76
Query: 238 ISGFRRIRE--LRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD--TFSSLVNDYCA 293
S R ++ L F +E++ E HD T + ++N YC
Sbjct: 77 CSAVARTKQYDLVLGFCKGMELNGIE-------------------HDMYTMTIMINCYCR 117
Query: 294 EDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSY 350
+ K A + ++ Y PD++++ L+NG + A L+
Sbjct: 118 KKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV-------------- 163
Query: 351 IIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDH 410
D ++E + +V L+ G ++G V+EA D M+ ++P+ Y ++
Sbjct: 164 ---DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 411 CIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
C GN A D++++M + +I +L D +++
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 217/496 (43%), Gaps = 54/496 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +T+ TLI HN + V +V+ +M R PN TY ++ C R
Sbjct: 188 PDTITFTTLIHGLFL----HNKASEAVALVD---RMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + ++ II CK + + AL + EM KGI P+V Y
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC R +A L +M+ + ++P T++ L++A+ +G+F + L D++I++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR- 359
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
S P + TYN+L++G C R D+A ++ M PD V+Y+ +I GF +
Sbjct: 360 -------SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+ + EL EM + LV D T+++L+ + D A+
Sbjct: 413 SKRVEDGTELFREMSHR------------GLVGDTV---TYTTLIQGLFHDGDCDNAQKV 457
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLF-YIVAHCLTIPSYIIYDILIEK 359
K PD ++Y +LL+GL + L +F Y+ + + YI ++
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNG--KLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
C + +L ++G+ +P YN +I C + +A
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGV----------------KPNVVTYNTMISGLCSKRLLQEA 559
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCN-LNDSEQLKILDE 478
Y + K+M G + + + LI+A D + +IR +RSC + D+ + ++
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE-MRSCRFVGDASTIGLVAN 618
Query: 479 IDPERCIIYALLDVLA 494
+ + + + LD+L+
Sbjct: 619 MLHDGRLDKSFLDMLS 634
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 210/510 (41%), Gaps = 75/510 (14%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P V +N L+SA + +K + ++ L +M E+ TY +I FC R++
Sbjct: 83 PSIVEFNKLLSAIAKMKK-------FDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + G P + S +++ +C K + A+ + +M++ G PD +
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL-------- 175
LI L + EA L M+ RG P TY +V C +G+ +L
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 176 --QDEVIQKG-----------------FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEAL 216
D VI F P++VTY++LI LC + R +A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 276
++L M E ++P+ V+++A+I F + + +A +L +M ++ +D D
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS----IDPDIF----- 366
Query: 277 DLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAT 333
T++SLVN +C DKA+ + PD V+Y L+ G K T
Sbjct: 367 ------TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 334 RLLLFYIVAHCLTIPSYIIYDILIE------KCANNE--FKSVVE------------LVK 373
LF ++H + + Y LI+ C N + FK +V L+
Sbjct: 421 E--LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 374 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVC 433
G G + +A D M + + +Y +I C G V +D++ + G
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 434 HMFSVLALIKALYCDERYNEMSWVIRNTLR 463
++ + +I L C +R + ++ + ++
Sbjct: 539 NVVTYNTMISGL-CSKRLLQEAYALLKKMK 567
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 150/325 (46%), Gaps = 33/325 (10%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ VT+N LI A + K +V +LY M R + P+ TY ++ FC +
Sbjct: 327 NPNLVTFNALIDAFVKEGK-------FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R+++A + M K P +Y+ +I FCK+K + E+ EM +G+ D Y
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LIQ L H A+ +F++M+ G+ P TY L++ C G+ K + D +QK
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQK 498
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
+ + Y +I G+C + D+ ++ + + P+ V+Y+ +ISG
Sbjct: 499 -------SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE-DKAEMAL 301
R L++A+ L +M + L N T+++L+ + + DKA A
Sbjct: 552 SKRLLQEAYALLKKMKEDGP---------------LPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 302 KLR--YQAQYLPDSVSYCLLLNGLH 324
+R +++ D+ + L+ N LH
Sbjct: 597 LIREMRSCRFVGDASTIGLVANMLH 621
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 178/437 (40%), Gaps = 62/437 (14%)
Query: 42 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 101
R S YR ++R ++++A+G+ M + P +++++S K K+
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 102 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
+ + +M I ++ Y +LI C + ++ A L +M+ G P T +L+
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 162 AYCLKGEFSKVFHLQDEVIQKGFLPYYVT---------------------------SFSP 194
YC S L D++++ G+ P +T P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
+LVTY +++GLC D AL +L M ++ D V ++ +I + R + A L
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 255 LEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLP 311
EM+ K N T+SSL++ C+ + A L + + P
Sbjct: 284 KEMETKGI---------------RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 312 DSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVEL 371
+ V++ L++ K+ A +L YD +I++ + + + L
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKL-----------------YDDMIKRSIDPDIFTYNSL 371
Query: 372 VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
V GF M +++A + + M+ ++ P+ YN LI C V ++++EM H G
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 432 VCHMFSVLALIKALYCD 448
V + LI+ L+ D
Sbjct: 432 VGDTVTYTTLIQGLFHD 448
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 178/422 (42%), Gaps = 48/422 (11%)
Query: 28 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 87
P I Y ++ N + ++ FC + +A + + ++ L P S++
Sbjct: 220 PTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN 279
Query: 88 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 147
+I+ +CK + + +K +M PDV Y LI LC + ++ A LF EM R
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339
Query: 148 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 207
G+ P + TL+ + GE + +++ KG P +V YN L++G C
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG--------LQPDIVLYNTLVNGFC 391
Query: 208 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 267
A I+ GM L PD+++Y+ +I GF R ++ A E++ EMDQ LD
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI--ELD 449
Query: 268 QDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLH 324
+ FS+LV C E + AE AL+ +A PD V+Y ++++
Sbjct: 450 R-------------VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496
Query: 325 KKATSRFATRLLL-FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNE 383
KK ++ +LL H +PS + Y++L+ G G +
Sbjct: 497 KKGDAQTGFKLLKEMQSDGH---VPSVVTYNVLLN---------------GLCKLGQMKN 538
Query: 384 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 443
A D ML+ P+ YN L+ H N K Y E+ G V + S +++
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI---GIVADLASYKSIVN 595
Query: 444 AL 445
L
Sbjct: 596 EL 597
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 33/329 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P V++NTLI+ C K NL + L HQM P+ TY +I C N+
Sbjct: 273 PTVVSFNTLINGYC---KVGNLDEGF----RLKHQMEKSRTRPDVFTYSALINALCKENK 325
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A G+ M ++GL P+ ++ +I +N E+ E +ML KG+ PD+ Y
Sbjct: 326 MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNT 385
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ C L+ AR++ M+ RG+ P TY TL++ +C G+ ++ E+ Q G
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
V ++AL+ G+C R +A LR M + PD+V+Y+ ++ F +
Sbjct: 446 --------IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMA 300
+ + F+L EM Q + P S+V T++ L+N C + A+M
Sbjct: 498 KGDAQTGFKLLKEM-QSDGHVP-------SVV-------TYNVLLNGLCKLGQMKNADML 542
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATS 329
L +PD ++Y LL G H+ A S
Sbjct: 543 LDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 2 TDPDCVTYNTLISAACEAEK---NHNL------------SIPYVRIV------------- 33
T PD TY+ LI+A C+ K H L + + ++
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
E Y +M + L P+ Y ++ FC + A I+ M +GL P +Y+ +I F
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
C+ ++ ALE++ EM GI D + L+ +C + R+++A +EML G+ P
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
TY +++A+C KG+ F L E+ G + PS+VTYN L++GLC +
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV--------PSVVTYNVLLNGLCKLGQMK 537
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 257
A +L M + + PD+++Y+ ++ G R K + K E+
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 117/286 (40%), Gaps = 51/286 (17%)
Query: 190 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 249
F ++ +N L++ C +A ++ + + L P VS++ +I+G+ ++ L +
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 250 AFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQ 306
F LK +M++ T + T+S+L+N C E+K + A L +
Sbjct: 294 GFRLKHQMEKSRT---------------RPDVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 307 AQYLPDSVSYCLLLNG--------LHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE 358
+P+ V + L++G L K++ + ++ L P ++Y+ L
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ----------PDIVLYNTL-- 386
Query: 359 KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 418
V GF G + A D M+ R RP+ Y LI C GG+V
Sbjct: 387 -------------VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Query: 419 AYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRS 464
A ++ KEM G AL+ + + R + +R LR+
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 190/433 (43%), Gaps = 57/433 (13%)
Query: 39 MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 98
M R + N + +++ C +AV +LR M L P SY+ +I FC+ KE
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 99 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 158
+ KALE+ EM G + +G+LI C ++ EA +EM G+ Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 159 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 218
L+ +C GE + L DEV+++G SP +TYN LI G C + EA EI
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERG--------DSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 219 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDL 278
M E + P+ +Y+ +I G + + ++A +L M +K D++ N
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK------DEEPNAV----- 353
Query: 279 SNHDTFSSLVNDYCAE----DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATR 334
T++ ++N C + D E+ ++L + + PD+++Y +LL GL K A++
Sbjct: 354 ----TYNIIINKLCKDGLVADAVEI-VELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 335 LLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLH 393
LL + T P I Y+ LI C N +++ D ++
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY----------------DLLVE 452
Query: 394 RNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI----------- 442
+ + N+L+ G+V+KA +++K++ V + + A+I
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 443 -KALYCDERYNEM 454
K L C R +E+
Sbjct: 513 AKGLLCKMRVSEL 525
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 198/437 (45%), Gaps = 57/437 (13%)
Query: 22 NHNLSIPYV-------RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLM 74
NHN+ + + + V L +M L P+ +Y +IR FC+ +E+A+ + M
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 75 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 134
G S ++ +I FCK +M +A+ EM G+ D+ Y LI+ C L
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 135 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 194
+ LF E+L RG SP TY+TL+ +C G+ + + + +I++G P
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG--------VRP 315
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
++ TY LI GLC + EAL++L M E +P+ V+Y+ +I+ + + A E+
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI- 374
Query: 255 LEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY----QAQYL 310
+E+ +K P ++ T++ L+ CA+ + A KL Y + Y
Sbjct: 375 VELMKKRRTRP--------------DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 311 -PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC--------A 361
PD +SY L++GL K+ +R L ++ ++ L + +IL+ A
Sbjct: 421 DPDVISYNALIHGLCKE--NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 362 NNEFKSVVE------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 409
+K + + ++ GF G++N A M +P YN L+
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 410 HCIGGNVHKAYDMYKEM 426
C G++ +A+ +++EM
Sbjct: 539 LCKEGSLDQAWRLFEEM 555
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 185/435 (42%), Gaps = 54/435 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P +TYNTLI C+ + S E++ M R + PN TY +I C +
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEAS-------EIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+EA+ +L LM EK P+A +Y+ II++ CK+ + A+E+ M + PD Y +
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRG--MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
L+ LC + L EA L ML P +Y+ L+ C + + + D +++
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
K + VT N L++ ++A+E+ + + + + + +Y+A+I GF
Sbjct: 453 K--------LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
+ L A L +M E + V D ++ L++ C E + A
Sbjct: 505 CKTGMLNVAKGLLCKMRVSEL---------QPSVFD------YNCLLSSLCKEGSLDQAW 549
Query: 302 KLRYQAQY---LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE 358
+L + Q PD VS+ ++++G K + A LL+ ++ P Y LI
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG--MSRAGLSPDLFTYSKLIN 607
Query: 359 KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG-GNVH 417
+ F G ++EA D M+ + P+ + + + +CI G
Sbjct: 608 R---------------FLKLGYLDEAISFFDKMVDSGFEPDAHICD-SVLKYCISQGETD 651
Query: 418 KAYDMYKEMLHYGFV 432
K ++ K+++ V
Sbjct: 652 KLTELVKKLVDKDIV 666
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 181/429 (42%), Gaps = 49/429 (11%)
Query: 8 TYNTLISAACEAE-KNHNL---SIPYVR-IVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
Y+ L++A E E K +L S P ++ V ++ Q S M +L RN
Sbjct: 28 VYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRN 87
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
E A R M E + S S ++ + + ++ G A + ML +G +V+ +
Sbjct: 88 H-ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHN 146
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+L++ LC +A L +EM + P +Y+T++ +C E K L +E+
Sbjct: 147 ILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G S SLVT+ LI C + DEA+ L+ M M L+ D V Y+++I GF
Sbjct: 207 G--------CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA-- 300
EL + L E+ ++ D T+++L+ +C + + A
Sbjct: 259 DCGELDRGKALFDEVLER---------------GDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 301 -LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
+ + P+ +Y L++GL ++ A +LL I P+ + Y+I+I K
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD--EEPNAVTYNIIINK 361
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
+ GLV +A + M R RP+ YN+L+ C G++ +A
Sbjct: 362 LCKD---------------GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 420 YDMYKEMLH 428
+ ML
Sbjct: 407 SKLLYLMLK 415
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 15/251 (5%)
Query: 2 TDPDCVTYNTLISAAC-EAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
T PD +TYN L+ C + + + + Y+ + + + P+ +Y +I C
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT------DPDVISYNALIHGLCK 436
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
NR+ +A+ I L+ EK + + + +++ K ++ KA+E+ ++ D I +
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y +I C L A+ L +M + + P Y+ L+ + C +G + + L +E+
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+ P +V++N +I G A +L GM L PD +YS +I+
Sbjct: 557 RDNNF--------PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 241 FRRIRELRKAF 251
F ++ L +A
Sbjct: 609 FLKLGYLDEAI 619
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 83/213 (38%), Gaps = 28/213 (13%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIV---------------------------- 33
TDPD ++YN LI C+ + H Y +V
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
EL+ Q+ ++ N TY MI FC + A G+L M L P Y+ ++S
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
CK + +A + EM FPDV ++ ++I + A L M G+SP
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
TY L+ + G + D+++ GF P
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 190/446 (42%), Gaps = 56/446 (12%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELY---HQMCVRELSPNETTYRCMIRLFC 59
+P +TY+ L+ A+ RI + Y +M + PN Y +I F
Sbjct: 327 EPTLITYSILVKGLTRAK----------RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
+ + +A+ I LM KGLS + +Y+ +I +CKN + A + EML G +
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
++ +I LLC A EMLLR MSPGG TL+ C G+ SK L +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
+ KGF+ TS NAL+HGLC + DEA I + + D VSY+ +IS
Sbjct: 497 LNKGFVVDTRTS--------NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 240 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEM 299
G ++L +AF LD+ L D + T+S L+ +K E
Sbjct: 549 GCCGKKKLDEAFMF------------LDEMVKRGLKPD---NYTYSILICGLFNMNKVEE 593
Query: 300 ALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDIL 356
A++ + LPD +Y ++++G K + F + P+ ++Y+
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE--FFDEMMSKNVQPNTVVYN-- 649
Query: 357 IEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNV 416
L++ + G ++ A R+ M H+ P A Y LI I V
Sbjct: 650 -------------HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 417 HKAYDMYKEMLHYGFVCHMFSVLALI 442
+A +++EM G ++F ALI
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 209/510 (40%), Gaps = 95/510 (18%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P T N L+++ A + + + E + +C + +SP+ + I FC +
Sbjct: 224 PSKTTCNILLTSLVRANE-------FQKCCEAFDVVC-KGVSPDVYLFTTAINAFCKGGK 275
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VEEAV + M E G++P+ +++ +I +A K +M+++G+ P + Y +
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L++ L +R+ +A + +EM +G P Y+ L++++ G +K ++D ++ KG
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI----- 238
S + TYN LI G C + D A +L+ M + + ++ S+++VI
Sbjct: 396 --------LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 239 -----SGFRRIREL-------------------------RKAFELKLEMDQKETCWPLDQ 268
S R + E+ KA EL + K + +D
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG--FVVDT 505
Query: 269 DTNESLVKDLS----------------------NHDTFSSLVNDYCAE---DKAEMALKL 303
T+ +L+ L + ++++L++ C + D+A M L
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANN 363
+ PD+ +Y +L+ GL ++ + + +P Y ++I+ C
Sbjct: 566 MVKRGLKPDNYTYSILICGLFN--MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 364 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
E E D M+ +N +P VYN LI +C G + A ++
Sbjct: 624 E---------------RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 424 KEMLHYGFVCHMFSVLALIKALYCDERYNE 453
++M H G + + +LIK + R E
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 33/326 (10%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D T N L+ CEA K L + E+ + CV + +Y +I C + ++
Sbjct: 504 DTRTSNALLHGLCEAGK---LDEAFRIQKEILGRGCVMD----RVSYNTLISGCCGKKKL 556
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+EA L M ++GL P +YS +I ++ +A++ + G+ PDV+ Y ++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I C R E ++ F EM+ + + P Y+ L+ AYC G S L++++ KG
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
SP+ TY +LI G+ R +EA + M L+P+ Y+A+I G+ ++
Sbjct: 677 --------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 304
++ K L EM K N T++ ++ Y + A +L
Sbjct: 729 GQMVKVECLLREMHSKNV---------------HPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 305 YQAQ---YLPDSVSYCLLLNGLHKKA 327
+ + +PDS++Y + G K+
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 154/381 (40%), Gaps = 61/381 (16%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
TYNTLI C+ + N L +M + N+ ++ +I L C + A
Sbjct: 402 TYNTLIKGYCKNGQADNAE-------RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
+ + M + +SP + +IS CK+ + KALE+ + L+KG D L+
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 128 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 187
LC +L EA + +E+L RG +Y+TL+ C K + + F DE++++G P
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 188 YVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEALEILR 220
T P + TY+ +I G C +R +E E
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 221 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS- 279
M + P+ V Y+ +I + R L A EL+ +M K + T SL+K +S
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI--SPNSATYTSLIKGMSI 692
Query: 280 ---------------------NHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVS 315
N +++L++ Y K E L+ + P+ ++
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 316 YCLLLNGLHKKATSRFATRLL 336
Y +++ G + A+RLL
Sbjct: 753 YTVMIGGYARDGNVTEASRLL 773
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 36/276 (13%)
Query: 5 DCVTYNTLISAACEAEK-------------------NHNLSIPYVRIVEL--------YH 37
D V+YNTLIS C +K N+ SI + + +
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 38 QMCVRE-LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 96
C R + P+ TY MI C R EE M K + P+ Y+ +I +C++
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 97 KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTY 156
+ ALE++ +M KGI P+ Y LI+ + R+ EA+ LF+EM + G+ P Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 157 DTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEAL 216
L++ Y G+ KV L E+ K + P+ +TY +I G EA
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSK--------NVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 252
+L M E + PD ++Y I G+ + + +AF+
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 44/347 (12%)
Query: 102 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
AL++ + +KG+FP +L+ L + + F +++ +G+SP + T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 162 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 221
A+C G+ + L ++ + G +P++VT+N +I GL R DEA
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGV--------APNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 222 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNH 281
M E ++P ++YS ++ G R + + A+ + EM +K +P N
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG--FP-------------PNV 365
Query: 282 DTFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLF 338
+++L++ + A++++ S +Y L+ G K + A RLL
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL-- 423
Query: 339 YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 398
L+I + F SV+ L+ M + A R ML RN P
Sbjct: 424 ---KEMLSIGFNV---------NQGSFTSVICLLCSHLM---FDSALRFVGEMLLRNMSP 468
Query: 399 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
G + LI C G KA +++ + L+ GFV + AL+ L
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V YN LI A C + + LS+ +EL M + +SPN TY +I+ +R
Sbjct: 643 PNTVVYNHLIRAYCRSGR---LSMA----LELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VEEA + M +GL P+ Y+ +I + K +M K + EM K + P+ Y +
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 178
+I + EA L EM +G+ P TY + Y +G + F DE
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 190/446 (42%), Gaps = 56/446 (12%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELY---HQMCVRELSPNETTYRCMIRLFC 59
+P +TY+ L+ A+ RI + Y +M + PN Y +I F
Sbjct: 327 EPTLITYSILVKGLTRAK----------RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
+ + +A+ I LM KGLS + +Y+ +I +CKN + A + EML G +
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
++ +I LLC A EMLLR MSPGG TL+ C G+ SK L +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
+ KGF+ TS NAL+HGLC + DEA I + + D VSY+ +IS
Sbjct: 497 LNKGFVVDTRTS--------NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 240 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEM 299
G ++L +AF LD+ L D + T+S L+ +K E
Sbjct: 549 GCCGKKKLDEAFMF------------LDEMVKRGLKPD---NYTYSILICGLFNMNKVEE 593
Query: 300 ALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDIL 356
A++ + LPD +Y ++++G K + F + P+ ++Y+
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE--FFDEMMSKNVQPNTVVYN-- 649
Query: 357 IEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNV 416
L++ + G ++ A R+ M H+ P A Y LI I V
Sbjct: 650 -------------HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 417 HKAYDMYKEMLHYGFVCHMFSVLALI 442
+A +++EM G ++F ALI
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 209/510 (40%), Gaps = 95/510 (18%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P T N L+++ A + + + E + +C + +SP+ + I FC +
Sbjct: 224 PSKTTCNILLTSLVRANE-------FQKCCEAFDVVC-KGVSPDVYLFTTAINAFCKGGK 275
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VEEAV + M E G++P+ +++ +I +A K +M+++G+ P + Y +
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L++ L +R+ +A + +EM +G P Y+ L++++ G +K ++D ++ KG
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI----- 238
S + TYN LI G C + D A +L+ M + + ++ S+++VI
Sbjct: 396 --------LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 239 -----SGFRRIREL-------------------------RKAFELKLEMDQKETCWPLDQ 268
S R + E+ KA EL + K + +D
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG--FVVDT 505
Query: 269 DTNESLVKDLS----------------------NHDTFSSLVNDYCAE---DKAEMALKL 303
T+ +L+ L + ++++L++ C + D+A M L
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANN 363
+ PD+ +Y +L+ GL ++ + + +P Y ++I+ C
Sbjct: 566 MVKRGLKPDNYTYSILICGLFN--MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 364 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
E E D M+ +N +P VYN LI +C G + A ++
Sbjct: 624 E---------------RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 424 KEMLHYGFVCHMFSVLALIKALYCDERYNE 453
++M H G + + +LIK + R E
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 33/326 (10%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D T N L+ CEA K L + E+ + CV + +Y +I C + ++
Sbjct: 504 DTRTSNALLHGLCEAGK---LDEAFRIQKEILGRGCVMD----RVSYNTLISGCCGKKKL 556
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+EA L M ++GL P +YS +I ++ +A++ + G+ PDV+ Y ++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I C R E ++ F EM+ + + P Y+ L+ AYC G S L++++ KG
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
SP+ TY +LI G+ R +EA + M L+P+ Y+A+I G+ ++
Sbjct: 677 --------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 304
++ K L EM K N T++ ++ Y + A +L
Sbjct: 729 GQMVKVECLLREMHSKNV---------------HPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 305 YQAQ---YLPDSVSYCLLLNGLHKKA 327
+ + +PDS++Y + G K+
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 154/381 (40%), Gaps = 61/381 (16%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
TYNTLI C+ + N L +M + N+ ++ +I L C + A
Sbjct: 402 TYNTLIKGYCKNGQADNAE-------RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
+ + M + +SP + +IS CK+ + KALE+ + L+KG D L+
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 128 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 187
LC +L EA + +E+L RG +Y+TL+ C K + + F DE++++G P
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 188 YVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEALEILR 220
T P + TY+ +I G C +R +E E
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 221 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS- 279
M + P+ V Y+ +I + R L A EL+ +M K + T SL+K +S
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI--SPNSATYTSLIKGMSI 692
Query: 280 ---------------------NHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVS 315
N +++L++ Y K E L+ + P+ ++
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 316 YCLLLNGLHKKATSRFATRLL 336
Y +++ G + A+RLL
Sbjct: 753 YTVMIGGYARDGNVTEASRLL 773
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 36/276 (13%)
Query: 5 DCVTYNTLISAACEAEK-------------------NHNLSIPYVRIVEL--------YH 37
D V+YNTLIS C +K N+ SI + + +
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 38 QMCVRE-LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 96
C R + P+ TY MI C R EE M K + P+ Y+ +I +C++
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 97 KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTY 156
+ ALE++ +M KGI P+ Y LI+ + R+ EA+ LF+EM + G+ P Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 157 DTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEAL 216
L++ Y G+ KV L E+ K + P+ +TY +I G EA
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSK--------NVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 252
+L M E + PD ++Y I G+ + + +AF+
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 44/347 (12%)
Query: 102 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
AL++ + +KG+FP +L+ L + + F +++ +G+SP + T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 162 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 221
A+C G+ + L ++ + G +P++VT+N +I GL R DEA
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGV--------APNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 222 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNH 281
M E ++P ++YS ++ G R + + A+ + EM +K +P N
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG--FP-------------PNV 365
Query: 282 DTFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLF 338
+++L++ + A++++ S +Y L+ G K + A RLL
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL-- 423
Query: 339 YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 398
L+I + F SV+ L+ M + A R ML RN P
Sbjct: 424 ---KEMLSIGFNV---------NQGSFTSVICLLCSHLM---FDSALRFVGEMLLRNMSP 468
Query: 399 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
G + LI C G KA +++ + L+ GFV + AL+ L
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V YN LI A C + + LS+ +EL M + +SPN TY +I+ +R
Sbjct: 643 PNTVVYNHLIRAYCRSGR---LSMA----LELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VEEA + M +GL P+ Y+ +I + K +M K + EM K + P+ Y +
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 178
+I + EA L EM +G+ P TY + Y +G + F DE
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 168/359 (46%), Gaps = 41/359 (11%)
Query: 5 DCVTYNTLISAACEA---EKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
D ++ LI CEA EK+ +L I SPN Y +I C +
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEF----------GFSPNVVIYTTLIDGCCKK 211
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+E+A + M + GL + +Y+ +I+ KN + EM +M + G+FP+++ Y
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
++ LC R +A +F EM RG+S TY+TL+ C + + ++ + D++
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
G +P+L+TYN LI G C + +AL + R + L P V+Y+ ++SGF
Sbjct: 332 DG--------INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
R + A ++ EM+++ S V T++ L++ + D E A+
Sbjct: 384 CRKGDTSGAAKMVKEMEER--------GIKPSKV-------TYTILIDTFARSDNMEKAI 428
Query: 302 KLRYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
+LR + L PD +Y +L++G K A+RL + +C P+ +IY+ +I
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE--PNEVIYNTMI 485
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 188/404 (46%), Gaps = 44/404 (10%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 109
++ +I+ C+ +E++ +L + E G SP+ Y+ +I CK E+ KA ++ EM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
G+ + Y +LI L + +++++M G+ P TY+ ++ C G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 170 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 229
F + DE+ ++G S ++VTYN LI GLC + +EA +++ M ++P
Sbjct: 285 KDAFQVFDEMRERGV--------SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 230 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN 289
+ ++Y+ +I GF + +L KA L ++ + + SLV T++ LV+
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSR--------GLSPSLV-------TYNILVS 381
Query: 290 DYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLT 346
+C + A K+ + + P V+Y +L++ + A +L L +
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL--SMEELGL 439
Query: 347 IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLL 406
+P Y +LI GF ++G +NEA+R +M+ +N P +YN +
Sbjct: 440 VPDVHTYSVLIH---------------GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 407 IFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDER 450
I +C G+ ++A + KEM ++ S +I+ L C ER
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL-CKER 527
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 160/337 (47%), Gaps = 33/337 (9%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
P+ V Y TLI C+ + + +L+ +M L NE TY +I
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIE-------KAKDLFFEMGKLGLVANERTYTVLINGLFKNG 247
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ + M E G+ P+ +Y+ ++++ CK+ A ++ EM ++G+ ++ Y
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI LC + +L EA + +M G++P TY+TL++ +C G+ K L ++ +
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G SPSLVTYN L+ G C A ++++ M E + P +V+Y+ +I F
Sbjct: 368 G--------LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEM 299
R + KA +L+L M++ LV D+ T+S L++ +C + ++A
Sbjct: 420 RSDNMEKAIQLRLSMEEL------------GLVPDV---HTYSVLIHGFCIKGQMNEASR 464
Query: 300 ALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL 336
K + P+ V Y ++ G K+ +S A +LL
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 15/228 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ +TYNTLI C K + + L + R LSP+ TY ++ FC +
Sbjct: 335 NPNLITYNTLIDGFCGVGK-------LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
A +++ M E+G+ P +Y+ +I F ++ M KA+++++ M + G+ PDVH Y
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LI C + ++ EA LF+ M+ + P Y+T++ YC +G + L E+ +K
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
+P++ +Y +I LC ++ EA ++ M + +DP
Sbjct: 508 --------ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 201/474 (42%), Gaps = 58/474 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +T+ TLI HN + V +V+ +M R PN TY ++ C R
Sbjct: 113 PDTITFTTLIHGLFL----HNKASEAVALVD---RMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A +L M + ++ II CK + + AL + EM KGI P+V Y
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC R +A L +M+ + ++P T++ L++A+ +G+F + L D++I++
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR- 284
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
S P + TYN+LI+G C R D+A ++ M PD +Y+ +I GF +
Sbjct: 285 -------SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+ + EL EM + LV D T+++L+ + D A+
Sbjct: 338 SKRVEDGTELFREMSHR------------GLVGDTV---TYTTLIQGLFHDGDCDNAQKV 382
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLF-YIVAHCLTIPSYIIYDILIEK 359
K PD ++Y +LL+GL + L +F Y+ + + Y IY +IE
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNG--KLEKALEVFDYMQKSEIKLDIY-IYTTMIEG 439
Query: 360 -CANNEFKSVVELVKGFRMRG-------------------LVNEAARARDTMLHRNYRPE 399
C + +L ++G L+ EA M P+
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Query: 400 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
YN LI H G+ + ++ +EM FV S + L+ + D R ++
Sbjct: 500 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA-STIGLVANMLHDGRLDK 552
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 188/446 (42%), Gaps = 55/446 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P +N L+SA + +K + ++ L +M +S N TY +I FC R++
Sbjct: 8 PSIFEFNKLLSAIAKMKK-------FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +L M + G P + S +++ +C K + A+ + +M++ G PD +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI L + EA L M+ RG P TY +V C +G+ F+L +++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM---- 176
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+V +N +I LC ++ D+AL + + M + P+ V+YS++IS
Sbjct: 177 ----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
A +L +M +K+ N +LV TF++L++ + E K A KL
Sbjct: 233 YGRWSDASQLLSDMIEKK--------INPNLV-------TFNALIDAFVKEGKFVEAEKL 277
Query: 304 R---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK- 359
+ PD +Y L+NG A ++ F + C P Y+ LI+
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF--PDLDTYNTLIKGF 335
Query: 360 CANNEFKSVVELVKGFRMRGLVNE-------------------AARARDTMLHRNYRPEG 400
C + + EL + RGLV + A + M+ P+
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 401 AVYNLLIFDHCIGGNVHKAYDMYKEM 426
Y++L+ C G + KA +++ M
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 154/324 (47%), Gaps = 31/324 (9%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ VT+N LI A + K +V +L+ M R + P+ TY +I FC +
Sbjct: 252 NPNLVTFNALIDAFVKEGK-------FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R+++A + M K P D+Y+ +I FCK+K + E+ EM +G+ D Y
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LIQ L H A+ +F++M+ G+ P TY L++ C G+ K + D +QK
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQK 423
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
+ + Y +I G+C + D+ ++ + + P+ V+Y+ +ISG
Sbjct: 424 -------SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 243 RIRELRKAFELKLEMDQKETCWPL-DQDTNESLVK-DLSNHDTFSSLVNDYCAEDKAEMA 300
R L++A+ L +M + PL D T +L++ L + D +S AE+
Sbjct: 477 SKRLLQEAYALLKKMKED---GPLPDSGTYNTLIRAHLRDGDKAAS----------AELI 523
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLH 324
++R +++ D+ + L+ N LH
Sbjct: 524 REMR-SCRFVGDASTIGLVANMLH 546
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 180/391 (46%), Gaps = 45/391 (11%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P+ T+ ++ +C NR+E+A+ + + G P+ +Y+ +I CKN+ + A+E+
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
+M G P+V Y L+ LC R +A L ++M+ R + P T+ L++A+
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
G+ + L + +IQ S P + TY +LI+GLC + DEA ++ M
Sbjct: 271 VGKLMEAKELYNVMIQ--------MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 226 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 285
P+EV Y+ +I GF + + + ++ EM QK ++N T++
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV---------------VANTITYT 367
Query: 286 SLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRFATRLLLF-YIV 341
L+ YC + ++A ++ Q + PD +Y +LL+GL + L++F Y+
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC--CNGKVEKALMIFEYMR 425
Query: 342 AHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 401
+ I + + Y I+I+ G G V +A ++ + +P
Sbjct: 426 KREMDI-NIVTYTIIIQ---------------GMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 402 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
Y +I C G +H+A ++K+M GF+
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 146/327 (44%), Gaps = 33/327 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTY TLI C KN +L+ VEL++QM PN TY ++ C+ R
Sbjct: 186 PNVVTYTTLIRCLC---KNRHLN----HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+A +LR M ++ + P+ +++ +I F K ++ +A E+ M+ ++PDV YG
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC L EAR +F M G P Y TL+ +C + E+ QKG
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ + +TY LI G C RPD A E+ M PD +Y+ ++ G
Sbjct: 359 VV--------ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
++ KA + M ++E D+ N T++ ++ C K E A L
Sbjct: 411 NGKVEKALMIFEYMRKREM--------------DI-NIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 304 ---RYQAQYLPDSVSYCLLLNGLHKKA 327
+ P+ ++Y +++G ++
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRG 482
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 169/404 (41%), Gaps = 50/404 (12%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VT+ +L++ C + + + L+ Q+ PN TY +IR C
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIED-------AIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ AV + M G P+ +Y+ +++ C+ G A + +M+ + I P+V +
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI +L+EA++L+ M+ + P TY +L+ C+ G L DE Q
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG-------LLDEARQM 315
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
+L + P+ V Y LIHG C +R ++ ++I M + + + ++Y+ +I G+
Sbjct: 316 FYLMERNGCY-PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
+ A E+ +M + P D T++ L++ C K E AL
Sbjct: 375 LVGRPDVAQEVFNQMSSRRA--PPDI-------------RTYNVLLDGLCCNGKVEKALM 419
Query: 303 L-RYQAQYLPD--SVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
+ Y + D V+Y +++ G+ K A + ++ L K
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA-----------------FDLFCSLFSK 462
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 403
+ ++ GF RGL++EA M + P +VY
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 178/407 (43%), Gaps = 45/407 (11%)
Query: 23 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 82
HNL + ++L+ +M P+ + ++ + NR + + + M G+ P
Sbjct: 60 HNLQ--FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPL 117
Query: 83 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 142
+ + ++ C + + +A +M+ G PD+ + L+ CH R+ +A LF
Sbjct: 118 LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177
Query: 143 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 202
++L G P TY TL+ C + L +++ G P++VTYNAL
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG--------SRPNVVTYNAL 229
Query: 203 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 262
+ GLC R +A +LR M + ++P+ ++++A+I F ++ +L +A EL M Q
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM-- 287
Query: 263 CWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLL 319
S+ D+ T+ SL+N C D+A L + P+ V Y L
Sbjct: 288 ----------SVYPDVF---TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 320 LNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRG 379
++G K + R + +FY ++ + + I Y +LI+ G+ + G
Sbjct: 335 IHGFCK--SKRVEDGMKIFYEMSQKGVVANTITYTVLIQ---------------GYCLVG 377
Query: 380 LVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
+ A + M R P+ YN+L+ C G V KA +++ M
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 180/431 (41%), Gaps = 48/431 (11%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
L H+M ++ Y C I + +E+A + M GL P A +Y+ +I +C
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+ K + + E+ VEM + I + YG +++ +C L A ++ +EM+ G P
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 214
Y TL++ + F + E+ ++G +P + YN+LI GL +R DE
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQG--------IAPDIFCYNSLIIGLSKAKRMDE 505
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ------KETCWPLDQ 268
A L M E L P+ +Y A ISG+ E A + EM + K C L
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 269 D------------TNESLVKD--LSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLP 311
+ S+V L + T++ L+N DK AE + P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 312 DSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVEL 371
D SY +L+NG K + A+ + +V LT P+ IIY++L+
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASS-IFDEMVEEGLT-PNVIIYNMLL-------------- 669
Query: 372 VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
GF G + +A D M + P Y +I +C G++ +A+ ++ EM G
Sbjct: 670 -GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 432 VCHMFSVLALI 442
V F L+
Sbjct: 729 VPDSFVYTTLV 739
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 199/494 (40%), Gaps = 77/494 (15%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P Y +LI C + N+ Y +VE+ + V +SP TY +++ C
Sbjct: 380 PQAQAYASLIEGYC---REKNVRQGYELLVEMKKRNIV--ISP--YTYGTVVKGMCSSGD 432
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A I++ M G P+ Y+ +I F +N G A+ + EM ++GI PD+ Y
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI L +R+ EAR EM+ G+ P TY + Y EF+ E+ + G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 184 FLPYYVT------------------SFSPSLV---------TYNALIHGLCFFQRPDEAL 216
LP V S S+V TY L++GL + D+A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 276
EI R M + PD SY +I+GF ++ ++KA + D+ E L
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI------------FDEMVEEGLT- 659
Query: 277 DLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAT 333
N ++ L+ +C + E A +L + P++V+YC +++G K + A
Sbjct: 660 --PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK--SGDLAE 715
Query: 334 RLLLFYIVAHCLTIPSYIIYDILIEKC----------------------ANNEFKSVVEL 371
LF + +P +Y L++ C + F +++
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINW 775
Query: 372 VKGFRMRGLVNEA-ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
V F L E R D R +P YN++I C GN+ A +++ +M +
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 431 FVCHMFSVLALIKA 444
+ + + +L+
Sbjct: 836 LMPTVITYTSLLNG 849
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 185/440 (42%), Gaps = 57/440 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V LI+ C+ K + Y M + + + TY ++ ++
Sbjct: 555 PNKVLCTGLINEYCKKGK-------VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V++A I R M KG++P SY +I+ F K M KA + EM+++G+ P+V Y +
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ C + +A++L EM ++G+ P TY T+++ YC G+ ++ F L DE+ KG
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+P SF Y L+ G C + A+ I G + ++A+I+ +
Sbjct: 728 LVP---DSF-----VYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFK 778
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ ELK E+ + D+ N T++ +++ C E E A +L
Sbjct: 779 FGKT----ELKTEVLNRLMDGSFDRFGK-------PNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 304 RYQ---AQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI--- 357
+Q A +P ++Y LLNG K R A +F P +I+Y ++I
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDK--MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
Query: 358 --------------EKCANN--------EFKSVVELVKGFRMRGLVNEAARARDTMLHRN 395
+ A N + L+ GF G + A + + M+
Sbjct: 886 LKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Query: 396 YRPEGAVYNLLIFDHCIGGN 415
Y P+ A LI + CI N
Sbjct: 946 YIPDSATVIELINESCISSN 965
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 171/462 (37%), Gaps = 105/462 (22%)
Query: 58 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE-----------MK 106
C+ E+A+ ++ M E+ P A+ +S I+ C + +GK+ + +
Sbjct: 107 LCNFGSFEKALSVVERMIERNW-PVAEVWSSIVR--CSQEFVGKSDDGVLFGILFDGYIA 163
Query: 107 VEMLDKGIFPDVHAYGL-LIQLLCHQRRLLEA----------RDLFQEMLLRGMSPGGRT 155
+++ +F + GL L+ L + LL+A D+++ M+ R + +T
Sbjct: 164 KGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKT 223
Query: 156 YDTLVEAYCLKG--------------EF-------SKVFHLQDEVIQKGFLPYYVTSFSP 194
Y L+ A+C G EF L++ +I KG +P T
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT---- 279
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
Y+ LI GLC +R ++A +L M + + D +YS +I G + R
Sbjct: 280 ----YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR--------- 326
Query: 255 LEMDQKETCWPLDQDTNESLVKDLSNHD-TFSSLVNDYC--------AEDKAEMALKLRY 305
+ D + LV ++ +H + D C +KA+
Sbjct: 327 ------------NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 306 QAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEF 365
+ +P + +Y L+ G ++ R LL+ + + I Y ++ C++ +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLV-EMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 366 KSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 425
+VK M+ RP +Y LI A + KE
Sbjct: 434 DGAYNIVK----------------EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 426 MLHYGFV----CHMFSVLALIKALYCDERYNEMSWVIRNTLR 463
M G C+ ++ L KA DE + + ++ N L+
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/574 (22%), Positives = 219/574 (38%), Gaps = 130/574 (22%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVE-LYHQMCVRELSPNETTYRCMIRLFCDRN 62
P V YN LI + C + + N + + + E Y +M + N+ R C
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDL--LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 462
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ E+A ++R M +G P +YS++++ C +M A + EM G+ DV+ Y
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+++ C + +AR F EM G +P TY L+ AY + S L + ++ +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 183 GFLPYYVT-------------------------------------------SFSPSLVTY 199
G LP VT S P++VTY
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 200 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 259
AL+ G C R +EA ++L M +P+++ Y A+I G ++ +L +A E+K EM
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM-- 700
Query: 260 KETCWPLDQDTNESLV--------KDLS--------------NHDTFSSLVNDYCAEDKA 297
E +P T SL+ +DL+ N ++ +++ C K
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 298 EMALKLRYQAQY---LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYD 354
+ A KL + P+ V+Y +++G + T L L + P+Y+ Y
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGF--GMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 355 ILIEKCANNEFKSVV--------------------ELVKGFRMR-----GLVNEAARARD 389
+LI+ C N V ++++GF GL++E +
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDT 878
Query: 390 TMLHRNYR------------------------------PEGAVYNLLIFDHCIGGNVHKA 419
YR + YN LI C+ V A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
+ ++ EM G + M S +LIK L+ + + +E
Sbjct: 939 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/538 (22%), Positives = 212/538 (39%), Gaps = 100/538 (18%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P TYN LI A +A++ + S+ ++ +M + L + T RC C +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASL-------IHREMSLANLRMDGFTLRCFAYSLCKVGK 285
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
EA L L+ + P Y+++IS C+ +A++ M P+V Y
Sbjct: 286 WREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ ++++L + + M++ G P + +++LV AYC G+ S + L ++++ G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 184 FLPYYVT-------------------------SFSPSL--------VTYNALIHGLCFFQ 210
+P YV ++S L + ++ LC
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 462
Query: 211 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 270
+ ++A ++R M PD +YS V++ ++ AF L EM +
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG---------- 512
Query: 271 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKA 327
LV D+ T++ +V+ +C E A K + + + P+ V+Y L++ K
Sbjct: 513 --GLVADVY---TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 328 TSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-----------------CA--------- 361
+A L + CL P+ + Y LI+ C
Sbjct: 568 KVSYANELFETMLSEGCL--PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 362 -------NNEFKSVV---ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHC 411
N+E +VV L+ GF V EA + D M P VY+ LI C
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 412 IGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTL-RSCNLN 468
G + +A ++ EM +GF +++ +LI + +R + S V+ L SC N
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 151/367 (41%), Gaps = 48/367 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTY L+ C K+H + +L M + PN+ Y +I C +
Sbjct: 637 PNVVTYGALLDGFC---KSHRVE----EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++EA + M+E G +YS +I R+ K K A ++ +ML+ P+V Y
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I LC + EA L Q M +G P TY +++ + + G+ L + + KG
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P YVT Y LI C D A +L M + Y VI GF +
Sbjct: 810 VAPNYVT--------YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861
Query: 244 IRELRKAFELKLEMDQKETCWPL------------------------DQDTNESLVKDLS 279
E ++ L E+ Q +T L + T + + D S
Sbjct: 862 --EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYS 919
Query: 280 NHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL 336
+ T++SL+ C +K E A +L + +P+ S+C L+ GL + S+ + LL
Sbjct: 920 S--TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR--NSKISEALL 975
Query: 337 LFYIVAH 343
L ++H
Sbjct: 976 LLDFISH 982
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 31/258 (12%)
Query: 45 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
+PN Y MI C + +EA ++++M EKG P+ +Y+ +I F ++ LE
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 105 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
+ M KG+ P+ Y +LI C L A +L +EM Y ++E +
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF- 859
Query: 165 LKGEFSKVFHLQDEVIQKGFLPYY-------------------------VTSFSPSLV-- 197
EF + L DE+ Q P+ V +FS +LV
Sbjct: 860 -NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918
Query: 198 --TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 255
TYN+LI LC + + A ++ M + + P+ S+ ++I G R ++ +A L
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Query: 256 EMDQKETCWPLDQDTNES 273
+ E W ++ T++
Sbjct: 979 FISHMEIQWIEEKKTSDG 996
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 129/350 (36%), Gaps = 81/350 (23%)
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
++ + C+N ALE + D P Y LIQ RL A + +EM L
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
+ G T + C G++ + L + +F P V Y LI GLC
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVE-----------TENFVPDTVFYTKLISGLCE 314
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 268
+EA++ L M P+ V+YS ++ G ++L + + L M E C+P
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV-LNMMMMEGCYP--- 370
Query: 269 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKAT 328
+ F+SLV+ YC A KL L K
Sbjct: 371 -----------SPKIFNSLVHAYCTSGDHSYAYKL-------------------LKK--- 397
Query: 329 SRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARA 387
+ C +P Y++Y+ILI C + + + L++ A +A
Sbjct: 398 ------------MVKCGHMPGYVVYNILIGSICGDKDSLNC----------DLLDLAEKA 435
Query: 388 RDTMLHRNYRPEGAVYNLL---IFDHCI--GGNVHKAYDMYKEMLHYGFV 432
ML G V N + F C+ G KA+ + +EM+ GF+
Sbjct: 436 YSEML-----AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 155/337 (45%), Gaps = 39/337 (11%)
Query: 4 PDCVTYNTLISA-ACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD VT+ TL++ CE L++ R+VE HQ Y +I C
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALAL-VDRMVEEGHQ-----------PYGTIINGLCKMG 55
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
E A+ +L M E + H Y+ II R CK+ A + EM DKGIFPDV Y
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+I C R +A L ++M+ R ++P T+ L+ A +G+ S+ + +++++
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G P+ +TYN++I G C R ++A +L M PD V++S +I+G+
Sbjct: 176 GIF--------PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEM 299
+ + + E+ EM ++ ++N T+++L++ +C D A+
Sbjct: 228 KAKRVDNGMEIFCEMHRRGI---------------VANTVTYTTLIHGFCQVGDLDAAQD 272
Query: 300 ALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL 336
L + + P+ +++ +L L K R A +L
Sbjct: 273 LLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 123/255 (48%), Gaps = 15/255 (5%)
Query: 7 VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEE 66
V YN +I C+ H ++ L+ +M + + P+ TY MI FC R +
Sbjct: 77 VIYNAIIDRLCK--DGH-----HIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTD 129
Query: 67 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 126
A +LR M E+ ++P ++S +I+ K ++ +A E+ +ML +GIFP Y +I
Sbjct: 130 AEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMID 189
Query: 127 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
C Q RL +A+ + M + SP T+ TL+ YC + E+ ++G +
Sbjct: 190 GFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 249
Query: 187 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 246
+ VTY LIHG C D A ++L M + P+ +++ ++++ +E
Sbjct: 250 --------NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301
Query: 247 LRKAFELKLEMDQKE 261
LRKAF + ++ + E
Sbjct: 302 LRKAFAILEDLQKSE 316
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +TY+ +I + C + + + +L M R+++P+ T+ +I +
Sbjct: 109 PDVITYSGMIDSFCRSGR-------WTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V EA I M +G+ P +Y+ +I FCK + A M M K PDV +
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C +R+ ++F EM RG+ TY TL+ +C G+ L + +I G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
P Y +T+ +++ LC + +A IL + +
Sbjct: 282 VAPNY--------ITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VT++ LI+A + K E+Y M R + P TY MI FC ++
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAE-------EIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R+ +A +L MA K SP ++S +I+ +CK K + +E+ EM +GI + Y
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF--------- 173
LI C L A+DL M+ G++P T+ +++ + C K E K F
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Query: 174 ---HLQDE 178
HL+DE
Sbjct: 316 EGHHLEDE 323
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 122/305 (40%), Gaps = 47/305 (15%)
Query: 144 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 203
M+ G P T+ TL+ C +G + L D ++++G PY +I
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPY------------GTII 48
Query: 204 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 263
+GLC + AL +L M E + V Y+A+I + A L EM K
Sbjct: 49 NGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK--- 105
Query: 264 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLL 320
+ D+ T+S +++ +C + AE L+ + Q PD V++ L+
Sbjct: 106 ---------GIFPDVI---TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALI 153
Query: 321 NGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGL 380
N L K+ A + + + P+ I Y+ +I+ GF +
Sbjct: 154 NALVKEGKVSEAEEI--YGDMLRRGIFPTTITYNSMID---------------GFCKQDR 196
Query: 381 VNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLA 440
+N+A R D+M ++ P+ ++ LI +C V +++ EM G V + +
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 441 LIKAL 445
LI
Sbjct: 257 LIHGF 261
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 205/462 (44%), Gaps = 46/462 (9%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TYNTLI+ C+ H +++ +M S ++ TY ++ ++ +R
Sbjct: 277 PDAYTYNTLITC-CKRGSLHQ------EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+EA+ +L M G SP +Y+ +IS + ++ + +A+E+K +M +KG PDV Y
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ ++ A +F+EM G P T++ ++ Y +G+F+++ + DE+
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI---- 445
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
V SP +VT+N L+ E + + M P+ +++ +IS + R
Sbjct: 446 ----NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+A + M LD + DLS ++T + + +++E L
Sbjct: 502 CGSFEQAMTVYRRM--------LDA----GVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 304 RYQAQYLPDSVSYCLLL----NG-----LHKKATSRFATRL--------LLFYIVAHCLT 346
+ P+ ++YC LL NG +H A ++ + L + + C
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609
Query: 347 IP-SYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNL 405
+P + + L E+ + + ++ +V + R +V +A D M R + P A YN
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 406 LIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYC 447
L++ H + K+ ++ +E+L G + S +I A YC
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA-YC 710
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 16/197 (8%)
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
+ ++ R SP+ TT M+ ++ R V +A G+L M E+G +P +Y+ ++ +
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
+ + GK+ E+ E+L KGI PD+ +Y +I C R+ +A +F EM G+ P T
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 215
Y+T + +Y F + + +I+ G P+ TYN+++ G C R DEA
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHG--------CRPNQNTYNSIVDGYCKLNRKDEA 788
Query: 216 ---LEILRGMPEMLLDP 229
+E LR LDP
Sbjct: 789 KLFVEDLRN-----LDP 800
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 148/323 (45%), Gaps = 35/323 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ T+NTLISA ++ + + + +Y +M ++P+ +TY ++
Sbjct: 487 PERETFNTLISA-------YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E++ +L M + P+ +Y ++ + KE+G + E+ I P
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 124 LIQLLCHQRRLL-EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+ L+C + LL EA F E+ RG SP T +++V Y + +K + D + ++
Sbjct: 600 LV-LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
GF +PS+ TYN+L++ ++ EILR + + PD +SY+ VI +
Sbjct: 659 GF--------TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
R +R A + EM N +V D+ ++TF + Y A+ E A+
Sbjct: 711 RNTRMRDASRIFSEM------------RNSGIVPDVITYNTF---IGSYAADSMFEEAIG 755
Query: 303 -LRYQAQY--LPDSVSYCLLLNG 322
+RY ++ P+ +Y +++G
Sbjct: 756 VVRYMIKHGCRPNQNTYNSIVDG 778
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 153/387 (39%), Gaps = 61/387 (15%)
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
IIS K + A M + + G DV++Y LI + R EA ++F++M G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 149 MSPGGRTYDTLVEAYCLKG-EFSKVFHLQDEVIQKGFLPYYVT----------------- 190
P TY+ ++ + G ++K+ L +++ G P T
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 191 ----------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
FS VTYNAL+ RP EA+++L M P V+Y+++IS
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 300
+ R L +A ELK +M +K T + T+++L++ + K E A
Sbjct: 359 YARDGMLDEAMELKNQMAEKGT---------------KPDVFTYTTLLSGFERAGKVESA 403
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSR--FATRLLLFYIVAHCLTIPSYIIYDILIE 358
+ + + + + C N K +R F + +F + C P + ++ L+
Sbjct: 404 MSIFEEMRNAGCKPNIC-TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 359 KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 418
N S V G+ E RA + PE +N LI + G+ +
Sbjct: 463 VFGQNGMDSEVS--------GVFKEMKRA-------GFVPERETFNTLISAYSRCGSFEQ 507
Query: 419 AYDMYKEMLHYGFVCHMFSVLALIKAL 445
A +Y+ ML G + + ++ AL
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 88/186 (47%), Gaps = 9/186 (4%)
Query: 57 LFCDR-NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 115
L C + + + EA + E+G SP + + ++S + + + + KA + M ++G
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 116 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 175
P + Y L+ + ++ ++ +E+L +G+ P +Y+T++ AYC +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 176 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 235
E+ G + P ++TYN I +EA+ ++R M + P++ +Y+
Sbjct: 722 FSEMRNSGIV--------PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYN 773
Query: 236 AVISGF 241
+++ G+
Sbjct: 774 SIVDGY 779
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 159/335 (47%), Gaps = 38/335 (11%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D T N L++ C++ + PY+ +M P+ T+ +I FC NR+
Sbjct: 106 DLYTCNLLMNCFCQSSQ------PYLA-SSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EEA+ ++ M E G+ P Y+ II CKN + AL + +M + GI PDV Y L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
+ LC+ R +A L + M R + P T++ L++A+ +G+F L +E+I+
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR--- 275
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
S +P++ TY +LI+G C DEA ++ M PD V+Y+++I+GF +
Sbjct: 276 -----MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL- 303
+++ A ++ EM QK N T+++L+ + K +A ++
Sbjct: 331 KKVDDAMKIFYEMSQKGLT---------------GNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 304 -RYQAQYLPDSVS------YCLLLNGLHKKATSRF 331
++ +P ++ +CL NG KKA F
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 173/412 (41%), Gaps = 43/412 (10%)
Query: 18 EAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK 77
E +N S+ + ++L+ M P+ + ++ + + + + + +
Sbjct: 42 EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 78 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 137
G+S + + +++ FC++ + A +M+ G PD+ + LI C R+ EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 138 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 197
+ +M+ G+ P Y T++++ C G + L D++ G P +V
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG--------IRPDVV 213
Query: 198 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 257
Y +L++GLC R +A +LRGM + + PD ++++A+I F + + A EL EM
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 258 DQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSV 314
+ N T++SL+N +C E D+A L PD V
Sbjct: 274 IRMSIA---------------PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 315 SYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKG 374
+Y L+NG K + + +FY ++ + I Y LI+ G
Sbjct: 319 AYTSLINGFCK--CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ---------------G 361
Query: 375 FRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
F G N A M+ R P YN+L+ C G V KA ++++M
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 39/289 (13%)
Query: 4 PDCVTYNTLISAACE-AEKNHNLS--------------IPYVRIVE-------------L 35
PD V Y T+I + C+ N+ LS + Y +V L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
M R++ P+ T+ +I F + +A + M ++P+ +Y+ +I+ FC
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
+ +A +M M KG FPDV AY LI C +++ +A +F EM +G++ T
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 215
Y TL++ + G+ K V Q+ F P++ TYN L+H LC+ + +A
Sbjct: 355 YTTLIQGF---GQVGK-----PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 216 LEILRGMPEMLLD---PDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 261
L I M + +D P+ +Y+ ++ G +L KA + +M ++E
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 18/224 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V Y +LI+ C+ +K + ++++++M + L+ N TY +I+ F +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDD-------AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK---GIFPDVHA 120
A + M +G+ P+ +Y+ ++ C N ++ KAL + +M + G+ P++
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y +L+ LC+ +L +A +F++M R M G TY +++ C G+ +L +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
KG P++VTY +I GL EA + R M E
Sbjct: 488 SKG--------VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 153/388 (39%), Gaps = 59/388 (15%)
Query: 77 KGLSPHADSYSRI------ISRFCKNKEM----------GKALEMKVEMLDKGIFPDVHA 120
KG S A S+SR+ + FC +E+ +AL++ M++ P +
Sbjct: 15 KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
+ L+ ++ ++ +L + + G+S T + L+ +C + +++
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+ GF P +VT+ +LI+G C R +EA+ ++ M EM + PD V Y+ +I
Sbjct: 135 KLGF--------EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---A 297
+ + A L DQ N + D+ ++SLVN C + A
Sbjct: 187 LCKNGHVNYALSL------------FDQMENYGIRPDVV---MYTSLVNGLCNSGRWRDA 231
Query: 298 EMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
+ L+ + + PD +++ L++ K+ A L Y+ +I
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL-----------------YNEMI 274
Query: 358 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVH 417
+ L+ GF M G V+EA + M + P+ Y LI C V
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 418 KAYDMYKEMLHYGFVCHMFSVLALIKAL 445
A ++ EM G + + LI+
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGF 362
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 160/323 (49%), Gaps = 33/323 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V+YN LI N +L + + E+ Q V P TY +I N+
Sbjct: 325 PDSVSYNILIRGC---SNNGDLEMAFAYRDEMVKQGMV----PTFYTYNTLIHGLFMENK 377
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E A ++R + EKG+ + +Y+ +I+ +C++ + KA + EM+ GI P Y
Sbjct: 378 IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTS 437
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI +LC + + EA +LF++++ +GM P +TL++ +C G + F L E+
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM---- 493
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ S +P VTYN L+ GLC + +EA E++ M + PD +SY+ +ISG+ +
Sbjct: 494 ----DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ + AF ++ EM L N +L+ T+++L+ + E+A +L
Sbjct: 550 KGDTKHAFMVRDEM--------LSLGFNPTLL-------TYNALLKGLSKNQEGELAEEL 594
Query: 304 RYQAQ---YLPDSVSYCLLLNGL 323
+ + +P+ S+C ++ +
Sbjct: 595 LREMKSEGIVPNDSSFCSVIEAM 617
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 174/385 (45%), Gaps = 45/385 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P VTYNTL+ + I R++ +M + P+ TY ++ C+ R
Sbjct: 258 PTIVTYNTLVQGFSLRGR-----IEGARLI--ISEMKSKGFQPDMQTYNPILSWMCNEGR 310
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E +LR M E GL P + SY+ +I N ++ A + EM+ +G+ P + Y
Sbjct: 311 ASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNT 367
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI L + ++ A L +E+ +G+ TY+ L+ YC G+ K F L DE++ G
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDG 427
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P+ TY +LI+ LC + EA E+ + + PD V + ++ G
Sbjct: 428 --------IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
I + +AF L EMD + P D T++ L+ C E K E A +L
Sbjct: 480 IGNMDRAFSLLKEMDMM-SINPDDV--------------TYNCLMRGLCGEGKFEEAREL 524
Query: 304 RYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTI---PSYIIYDILI 357
+ + PD +SY L++G KK ++ A F + L++ P+ + Y+ L+
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHA-----FMVRDEMLSLGFNPTLLTYNALL 579
Query: 358 EKCANNEFKSVV-ELVKGFRMRGLV 381
+ + N+ + EL++ + G+V
Sbjct: 580 KGLSKNQEGELAEELLREMKSEGIV 604
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 181/416 (43%), Gaps = 50/416 (12%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
Y M E+ N T+ MI + C ++++A G L +M G+ P +Y+ ++ F
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+ A + EM KG PD+ Y ++ +C++ R A ++ +EM G+ P
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSV 328
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 214
+Y+ L+ G+ F +DE++++G +P + TYN LIHGL F + E
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTF--------YTYNTLIHGL-FMENKIE 379
Query: 215 ALEIL-RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 273
A EIL R + E + D V+Y+ +I+G+ + + +KAF L EM + P
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM-MTDGIQP-------- 430
Query: 274 LVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSR 330
T++SL+ C ++K A +L + PD V L++G A
Sbjct: 431 ------TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG--HCAIGN 482
Query: 331 FATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARD 389
L + P + Y+ L+ C +F+ EL+ + RG+
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI--------- 533
Query: 390 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
+P+ YN LI + G+ A+ + EML GF + + AL+K L
Sbjct: 534 -------KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 15/240 (6%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D VTYN LI+ C+ + L+ +M + P + TY +I + C +N+
Sbjct: 396 DSVTYNILINGYCQHGDAK-------KAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EA + + KG+ P + ++ C M +A + EM I PD Y L
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
++ LC + + EAR+L EM RG+ P +Y+TL+ Y KG+ F ++DE++ G
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG- 567
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
F+P+L+TYNAL+ GL Q + A E+LR M + P++ S+ +VI +
Sbjct: 568 -------FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 160/328 (48%), Gaps = 35/328 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TYN+LI + E L++ E+ H M + PN +Y ++ FC +
Sbjct: 387 PDVCTYNSLIYGYWK-EGLVGLAL------EVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++EA +L M+ GL P+ ++ +IS FCK + +A+E+ EM KG PDV+ +
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI LC + A L ++M+ G+ TY+TL+ A+ +GE + L +E++ +G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 184 FLPYYVTSFSP-SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
SP +TYN+LI GLC D+A + M P +S + +I+G
Sbjct: 560 ---------SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
R + +A E + EM + + + +V TF+SL+N C + E L
Sbjct: 611 RSGMVEEAVEFQKEM--------VLRGSTPDIV-------TFNSLINGLCRAGRIEDGLT 655
Query: 303 L--RYQAQYL-PDSVSYCLLLNGLHKKA 327
+ + QA+ + PD+V++ L++ L K
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 187/431 (43%), Gaps = 51/431 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +TY L++ C+ + V+ + R P + +I F R
Sbjct: 320 PDDITYGYLMNGLCKIGR-----------VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR 368
Query: 64 VEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+++A +L M G+ P +Y+ +I + K +G ALE+ +M +KG P+V++Y
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+L+ C ++ EA ++ EM G+ P ++ L+ A+C + + + E+ +K
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G P + T+N+LI GLC AL +LR M + + V+Y+ +I+ F
Sbjct: 489 GC--------KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
R E+++A +L EM + + PLD+ T SL+K L DKA +
Sbjct: 541 RRGEIKEARKLVNEMVFQGS--PLDEITYNSLIKGLCRAGEV----------DKARSLFE 588
Query: 303 LRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CA 361
+ + P ++S +L+NGL + A ++ + P + ++ LI C
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG--STPDIVTFNSLINGLCR 646
Query: 362 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 421
+ + + + + G+ P+ +N L+ C GG V+ A
Sbjct: 647 AGRIEDGLTMFRKLQAEGI----------------PPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 422 MYKEMLHYGFV 432
+ E + GFV
Sbjct: 691 LLDEGIEDGFV 701
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 190/473 (40%), Gaps = 94/473 (19%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
+++ M R++ P T+ +++ FC N ++ A+ +LR M + G P++ Y +I
Sbjct: 204 VFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLS 263
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K + +AL++ EM G PD + +I LC R+ EA + ML+RG +P
Sbjct: 264 KCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDI 323
Query: 155 TYDTLVEAYCLKGE------------------FSKVFH--------------LQDEVIQK 182
TY L+ C G F+ + H L D V
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 183 GFLPYYVTSFS---------------------------PSLVTYNALIHGLCFFQRPDEA 215
G +P T S P++ +Y L+ G C + DEA
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
+L M L P+ V ++ +IS F + + +A E+ EM +K C P
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK-GCKP---------- 492
Query: 276 KDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
+ TF+SL++ C D+ + AL L + ++V+Y L+N ++ + A
Sbjct: 493 ----DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 392
+L + +++ + +E + L+KG G V++A + ML
Sbjct: 549 RKL----------------VNEMVFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 393 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
+ P N+LI C G V +A + KEM+ G + + +LI L
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 4 PDCVTYNTLISAACEA-EKNHNL--------------SIPYVRIV-------------EL 35
PD T+N+LIS CE E H L ++ Y ++ +L
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
++M + +E TY +I+ C V++A + M G +P S + +I+ C+
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
+ + +A+E + EM+ +G PD+ + LI LC R+ + +F+++ G+ P T
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 190
++TL+ C G L DE I+ GF+P + T
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 155/386 (40%), Gaps = 48/386 (12%)
Query: 81 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 140
P SY+ ++ A + +ML + I P + +G++++ C + A L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 141 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 200
++M G P Y TL+ + ++ L +E+ G + P T+N
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV--------PDAETFN 291
Query: 201 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
+I GLC F R +EA +++ M PD+++Y +++G +I + A +L + +
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP 351
Query: 261 ETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALK-LRYQAQYLPDSVSY 316
E F++L++ + D A+ L + +PD +Y
Sbjct: 352 EIV-------------------IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 317 CLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFR 376
L+ G K+ A +L +D+ + C N + + LV GF
Sbjct: 393 NSLIYGYWKEGLVGLALEVL----------------HDMRNKGCKPNVYSYTI-LVDGFC 435
Query: 377 MRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMF 436
G ++EA + M +P +N LI C + +A ++++EM G ++
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 437 SVLALIKALYCDERYNEMSWVIRNTL 462
+ +LI L + W++R+ +
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMI 521
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 179/440 (40%), Gaps = 65/440 (14%)
Query: 74 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF---PDVHAYGLLIQLL-- 128
M ++G+ + I+ + K G+ + +EM + ++ P +Y +++++L
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM--RNVYSCEPTFKSYNVVLEILVS 194
Query: 129 --CHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
CH+ A ++F +ML R + P T+ +++A+C E L ++ + G +P
Sbjct: 195 GNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP 250
Query: 187 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG---FRR 243
+ V Y LIH L R +EAL++L M M PD +++ VI G F R
Sbjct: 251 --------NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD-TFSSLVNDYCAEDKAEMALK 302
I E K N L++ + D T+ L+N C + + A
Sbjct: 303 INEAAKM-------------------VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 303 LRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCAN 362
L Y+ P+ V + L++G A +L + + Y I+ + C
Sbjct: 344 LFYRIPK-PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS----------YGIVPDVCTY 392
Query: 363 NEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDM 422
N L+ G+ GLV A M ++ +P Y +L+ C G + +AY++
Sbjct: 393 NS------LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 423 YKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLND----SEQLKILDE 478
EM G + LI A + R E + R R D + + L E
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 479 IDPERCIIYALLDVLAEKAM 498
+D + ++ L D+++E +
Sbjct: 507 VDEIKHALWLLRDMISEGVV 526
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 7/158 (4%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +TYN+LI C A + + L+ +M +P+ + +I C V
Sbjct: 563 DEITYNSLIKGLCRAGEVD-------KARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EEAV + M +G +P +++ +I+ C+ + L M ++ +GI PD + L
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 162
+ LC + +A L E + G P RT+ L+++
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P ++ N LI+ C + VE +M +R +P+ T+ +I C R
Sbjct: 597 PSNISCNILINGLCRSGMVE-------EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E+ + + R + +G+ P +++ ++S CK + A + E ++ G P+ + +
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 124 LIQLLCHQRRL 134
L+Q + Q L
Sbjct: 710 LLQSIIPQETL 720
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 16/263 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD ++YN L+ A K + +L +M + PN TY +I C
Sbjct: 295 EPDVISYNILLRALLNQGK-------WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++EEA+ +L+LM EKGL+P A SY +I+ FC+ + A+E M+ G PD+ Y
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++ LC + +A ++F ++ G SP +Y+T+ A G+ + H+ E++
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G P +TYN++I LC DEA E+L M P V+Y+ V+ GF
Sbjct: 468 G--------IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 243 RIRELRKAFELKLEMDQKETCWP 265
+ + A + LE C P
Sbjct: 520 KAHRIEDAINV-LESMVGNGCRP 541
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 194/430 (45%), Gaps = 50/430 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD YN LI+ C+ + + + R+++ +M ++ SP+ TY MI C R +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDAT----RVLD---RMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A+ +L + P +Y+ +I + +AL++ EML +G+ PD+ Y
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I+ +C + + A ++ + + L+G P +Y+ L+ A +G++ E +K
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW--------EEGEKL 320
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ P++VTY+ LI LC + +EA+ +L+ M E L PD SY +I+ F R
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 380
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
L A E LE + C P D+ N++T ++ C KA+ AL++
Sbjct: 381 EGRLDVAIEF-LETMISDGCLP-----------DIVNYNT---VLATLCKNGKADQALEI 425
Query: 304 RYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
+ + P+S SY + + L A ++L ++++ + P I Y+ +I C
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL-EMMSNGID-PDEITYNSMI-SC 482
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 420
E G+V+EA M + P YN+++ C + A
Sbjct: 483 LCRE--------------GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528
Query: 421 DMYKEMLHYG 430
++ + M+ G
Sbjct: 529 NVLESMVGNG 538
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 178/425 (41%), Gaps = 60/425 (14%)
Query: 4 PDCVTYNTLISAACEAEK--------NHNLS-------IPYVRIVE-------------L 35
PD VTYN +I + C K N LS I Y ++E L
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
+M R L P+ TY +IR C V+ A ++R + KG P SY+ ++
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
+ + ++ +M + P+V Y +LI LC ++ EA +L + M +G++P +
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 215
YD L+ A+C +G + +I G L P +V YN ++ LC + D+A
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCL--------PDIVNYNTVLATLCKNGKADQA 422
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
LEI + E+ P+ SY+ + S + +A + LEM +D D
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN----GIDPD------ 472
Query: 276 KDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
T++S+++ C E + A +L ++ P V+Y ++L G K A
Sbjct: 473 -----EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKS-VVELVKGFRMRGLVNEAARARDTM 391
+L + C P+ Y +LIE +++ +EL ++E + R
Sbjct: 528 INVLESMVGNGCR--PNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKR--- 582
Query: 392 LHRNY 396
LHR +
Sbjct: 583 LHRTF 587
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 172/458 (37%), Gaps = 93/458 (20%)
Query: 88 RIISRFCKNKEMGKALEMKVEMLDKG--------------IF------------------ 115
+I R C++ ++L + M+ KG F
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 116 --PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
PDV AY LI C R+ +A + M + SP TY+ ++ + C +G+
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 174 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 233
+ ++++ + P+++TY LI DEAL+++ M L PD +
Sbjct: 214 KVLNQLLSD--------NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 234 YSAVISGFRRIRELRKAFELKLEMDQKETCWP------------LDQ---DTNESLVKDL 278
Y+ +I G + + +AFE+ ++ K C P L+Q + E L+ +
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELK-GCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 279 ------SNHDTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATS 329
N T+S L+ C + K E A LKL + PD+ SY L+ ++
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 330 RFATRLLLFYIVAHCLTIPSYIIYD-ILIEKCANNEFKSVVELVKGFRMRG--------- 379
A L I CL P + Y+ +L C N + +E+ G
Sbjct: 385 DVAIEFLETMISDGCL--PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 380 -----LVNEAARARD-----TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM--- 426
L + + R M+ P+ YN +I C G V +A+++ +M
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Query: 427 -LHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLR 463
H V + +L KA ++ N + ++ N R
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 197/469 (42%), Gaps = 59/469 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTY LI A C A K E++ +M P+ TY ++ F D
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAK-------EVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ M + G P +++ ++ CK G+A + M D+GI P++H Y
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI L RL +A +LF M G+ P TY ++ Y G+ +++ KG
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+P++V NA ++ L R EA +I G+ ++ L PD V+Y+ ++ + +
Sbjct: 464 --------IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ E+ +A +L EM + C P + +SL+N D+ + A K+
Sbjct: 516 VGEIDEAIKLLSEM-MENGCEP--------------DVIVVNSLINTLYKADRVDEAWKM 560
Query: 304 RYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE-K 359
+ + + P V+Y LL GL K + A L + C P+ I ++ L +
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC--PPNTITFNTLFDCL 618
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
C N+E V A + M+ P+ YN +IF G V +A
Sbjct: 619 CKNDE----------------VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Query: 420 ---YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSC 465
+ K++++ FV + ++KA ++ Y +I N L +C
Sbjct: 663 MCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK----IITNFLYNC 707
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 144/345 (41%), Gaps = 44/345 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P TYN LI EA+ + I +++ C+ P+ TY ++ + +
Sbjct: 783 PKLPTYNLLIGGLLEADM---IEIAQDVFLQVKSTGCI----PDVATYNFLLDAYGKSGK 835
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML-DKGIFPDVHAYG 122
++E + + M+ + +++ +IS K + AL++ +++ D+ P YG
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI L RL EA+ LF+ ML G P Y+ L+ + GE L ++++
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G P L TY+ L+ LC R DE L + + E L+PD V Y+ +I+G
Sbjct: 956 GV--------RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS----------------------N 280
+ L +A L EM P D T SL+ +L N
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITP-DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 281 HDTFSSLVNDYCAEDKAEMALKLRYQ----AQYLPDSVSYCLLLN 321
TF++L+ Y K E A + YQ + P++ +Y L N
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAV-YQTMVTGGFSPNTGTYEQLPN 1110
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 180/462 (38%), Gaps = 72/462 (15%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VT TL+ +A +L +I+ + C + P + +I
Sbjct: 675 PDFVTLCTLLPGVVKA----SLIEDAYKIITNFLYNCADQ--PANLFWEDLIGSILAEAG 728
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRF-CKNKEMGKALEMKVEML-DKGIFPDVHAY 121
++ AV + G+ DS I R+ CK+ + A + + D G+ P + Y
Sbjct: 729 IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTY 788
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE--- 178
LLI L + A+D+F ++ G P TY+ L++AY G+ ++F L E
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 179 -----------VIQKGFLP----------YY----VTSFSPSLVTYNALIHGLCFFQRPD 213
++ G + YY FSP+ TY LI GL R
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 273
EA ++ GM + P+ Y+ +I+GF + E A C + E
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA------------CALFKRMVKEG 956
Query: 274 LVKDLSNHDTFSSLVNDYCAEDKAEMAL---KLRYQAQYLPDSVSYCLLLNGLHKKATSR 330
+ DL T+S LV+ C + + L K ++ PD V Y L++NGL K + R
Sbjct: 957 VRPDLK---TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK--SHR 1011
Query: 331 FATRLLLFYIVAHCLTI-PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARD 389
L+LF + I P Y+ LI + G+V EA + +
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLG---------------IAGMVEEAGKIYN 1056
Query: 390 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
+ P +N LI + + G AY +Y+ M+ GF
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 182/445 (40%), Gaps = 49/445 (11%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
++ M R + + TY + + + +++A LR M E G +A SY+ +I
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K++ +A+E+ M+ +G P + Y L+ L +R + L +EM G+ P
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 214
T+ + G+ ++ + + + +G P +VTY LI LC ++ D
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEG--------CGPDVVTYTVLIDALCTARKLDC 311
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 274
A E+ M PD V+Y ++ F R+L + EM++ +
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK------------DGH 359
Query: 275 VKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRF 331
V D+ TF+ LV+ C +A L + LP+ +Y L+ GL + R
Sbjct: 360 VPDVV---TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR--VHRL 414
Query: 332 ATRLLLFYIVAHCLTIPSYIIYDILIEKCA-NNEFKSVVELVKGFRMRGL---------- 380
L LF + P+ Y + I+ + + S +E + + +G+
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 381 ---VNEAARARDT------MLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
+ +A R R+ + P+ YN+++ + G + +A + EM+ G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 432 VCHMFSVLALIKALYCDERYNEMSW 456
+ V +LI LY +R +E +W
Sbjct: 535 EPDVIVVNSLINTLYKADRVDE-AW 558
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 114/514 (22%), Positives = 200/514 (38%), Gaps = 88/514 (17%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD + N+LI+ +A++ ++R+ E+ +L P TY ++
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM-------KLKPTVVTYNTLLAGLGKNG 587
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+++EA+ + M +KG P+ +++ + CKN E+ AL+M +M+D G PDV Y
Sbjct: 588 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN 647
Query: 123 LLIQLLCHQRRLLEARDLFQEM---------LLRGMSPGGRTYDTLVEAYCLKGEF---- 169
+I L ++ EA F +M L + PG + +AY + F
Sbjct: 648 TIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 707
Query: 170 ----SKVF--HLQDEVIQKGFLPYYVTSFSPSLVTYN----------ALIHGLCFFQRPD 213
+ +F L ++ + + V SFS LV +I C
Sbjct: 708 ADQPANLFWEDLIGSILAEAGIDNAV-SFSERLVANGICRDGDSILVPIIRYSCKHNNVS 766
Query: 214 EALEILRGMPEML-LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP------- 265
A + + L + P +Y+ +I G + A ++ L++ + C P
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV-KSTGCIPDVATYNF 825
Query: 266 -LDQ-------DTNESLVKDLSNHD----------TFSSLVNDYCAEDKAEMALKLRYQA 307
LD D L K++S H+ S LV +D ++ L
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 308 QYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKS 367
+ P + +Y L++GL K A +L + C P+ IY+ILI
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR--PNCAIYNILIN--------- 934
Query: 368 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 427
GF G + A M+ RP+ Y++L+ C+ G V + +KE+
Sbjct: 935 ------GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 428 HYGF----VCHMFSVLALIKALYCDER---YNEM 454
G VC+ + L K+ +E +NEM
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 166/387 (42%), Gaps = 43/387 (11%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
+SPN ++ +I+ C V+ A+ + R M E+ P +Y ++ CK + + +A+
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
+ EM +G P Y +LI LC + L L M L+G P TY+TL+
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
CLKG+ K L + ++ + P+ VTY LI+GL +R +A+ +L M
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCI--------PNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 224 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 283
E ++ YS +ISG + + +A L +M +K C P N
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK-GCKP--------------NIVV 399
Query: 284 FSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYI 340
+S LV+ C E K A+ L + LP++ +Y L+ G K A +
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ------ 453
Query: 341 VAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEG 400
+ ++ C+ N+F V L+ G G V EA ML +P+
Sbjct: 454 ----------VWKEMDKTGCSRNKFCYSV-LIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 401 AVYNLLIFDHCIGGNVHKAYDMYKEML 427
Y+ +I C G++ A +Y EML
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 209/476 (43%), Gaps = 66/476 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYV-RIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
P+ +++N +I A C+ + +V R +E++ M R+ P+ TY ++ C
Sbjct: 185 PNGLSFNLVIKALCK--------LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEE 236
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R++EAV +L M +G SP Y+ +I CK ++ + ++ M KG P+ Y
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI LC + +L +A L + M+ P TY TL+ + + L + ++
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 183 GF-LPYYVTSF--------------------------SPSLVTYNALIHGLCFFQRPDEA 215
G+ L ++ S P++V Y+ L+ GLC +P+EA
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ-----KETCWPLDQD- 269
EIL M P+ +YS+++ GF + +A ++ EMD+ + C+ + D
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 270 ------TNESLV---KDLS---NHDT--FSSLVNDYCAEDKAEMALKLRY------QAQY 309
E+++ K L+ DT +SS++ C + ALKL + + +
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 310 LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHC--LTIPSYIIYDILIEKCAN-NEFK 366
PD V+Y +LL+GL + A LL + C I + L EK + ++ +
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR 596
Query: 367 SVV-ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 421
S + ELV R V+ A + ML + P+ + + +++ + C ++ A D
Sbjct: 597 SFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 59/298 (19%)
Query: 184 FLPYYVTS-----FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
F Y V S SP+ +++N +I LC + D A+E+ RGMPE PD +Y ++
Sbjct: 170 FYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229
Query: 239 SGFRRIRELRKAFELKLEMDQKETCWPL---------------DQDTNESLVKDL----- 278
G + + +A L EM Q E C P D LV ++
Sbjct: 230 DGLCKEERIDEAVLLLDEM-QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGC 288
Query: 279 -SNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATR 334
N T+++L++ C + K + A+ L ++ +P+ V+Y L+NGL K+ + A R
Sbjct: 289 VPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVR 348
Query: 335 LLL------FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARAR 388
LL +++ H IY +LI G G EA
Sbjct: 349 LLSSMEERGYHLNQH--------IYSVLIS---------------GLFKEGKAEEAMSLW 385
Query: 389 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
M + +P VY++L+ C G ++A ++ M+ G + + ++ +L+K +
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 187/446 (41%), Gaps = 50/446 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P ++ L+SA + +K Y ++ L+ QM + + N T ++ FC ++
Sbjct: 79 PSIADFSRLLSAISKMKK-------YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ L M + G P ++ +++ FC+ + AL M +M+ G P+V Y
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I LC +++ A DL M G+ P TY++L+ C G +S + + ++
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR- 250
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P + T+NALI R EA E M LDPD V+YS +I G
Sbjct: 251 -------EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
L +A E+ M K C+P + T+S L+N YC K E +KL
Sbjct: 304 YSRLDEAEEMFGFMVSK-GCFP--------------DVVTYSILINGYCKSKKVEHGMKL 348
Query: 304 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
Q + ++V+Y +L+ G + A + F + C P+ I Y++L+
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI--FRRMVFCGVHPNIITYNVLLHGL 406
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 420
+N G + +A M + YN++I C G V A+
Sbjct: 407 CDN---------------GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 421 DMYKEMLHYGFVCHMFSVLALIKALY 446
D+Y + G + +++ ++ LY
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLY 477
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 143/333 (42%), Gaps = 62/333 (18%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTYN+LIS C + + + + R+V M RE+ P+ T+ +I R
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDAT----RMVSC---MTKREIYPDVFTFNALIDACVKEGR 271
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V EA M + L P +YS +I C + +A EM M+ KG FPDV Y +
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C +++ LF EM RG+ TY L++ YC G+ + V ++
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN--------VAEEI 383
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
F P+++TYN L+HGLC + ++AL IL M + +D D V+Y+ +I G +
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
E+ A+++ YC+ + +
Sbjct: 444 AGEVADAWDI-------------------------------------YCSLNCQGL---- 462
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL 336
+PD +Y ++ GL+KK R A L
Sbjct: 463 ------MPDIWTYTTMMLGLYKKGLRREADALF 489
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 15/256 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+N LI A + + E Y +M R L P+ TY +I C +R
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAE-------EFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++EA + M KG P +YS +I+ +CK+K++ +++ EM +G+ + Y +
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LIQ C +L A ++F+ M+ G+ P TY+ L+ C G+ K + ++ + G
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+VTYN +I G+C +A +I + L PD +Y+ ++ G +
Sbjct: 427 --------MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Query: 244 IRELRKAFELKLEMDQ 259
R+A L +M +
Sbjct: 479 KGLRREADALFRKMKE 494
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 143/328 (43%), Gaps = 33/328 (10%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P VT+ +L++ C ++ ++ + ++ QM PN Y +I C
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYD-------ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+V+ A+ +L M + G+ P +Y+ +IS C + A M M + I+PDV +
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI + R+ EA + ++EM+ R + P TY L+ C+ + + ++ K
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G P +VTY+ LI+G C ++ + +++ M + + + V+Y+ +I G+
Sbjct: 321 GCF--------PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
R +L A E+ M N T++ L++ C K E AL
Sbjct: 373 RAGKLNVAEEIFRRM---------------VFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 303 LRYQAQ---YLPDSVSYCLLLNGLHKKA 327
+ Q D V+Y +++ G+ K
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAG 445
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 4 PDCVTYNTLISAACEAEK-NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD VTY+ LI+ C+++K H + +L+ +M R + N TY +I+ +C
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGM--------KLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ A I R M G+ P+ +Y+ ++ C N ++ KAL + +M G+ D+ Y
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++I+ +C + +A D++ + +G+ P TY T++ KG + L ++ +
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Query: 183 GFLP 186
G LP
Sbjct: 496 GILP 499
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 197/472 (41%), Gaps = 59/472 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P TYN +I C+ + R L+ +M R L P+ TY MI F R
Sbjct: 260 PTVFTYNIMIDCMCKEG-----DVEAAR--GLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+++ V M + P +Y+ +I+ FCK ++ LE EM G+ P+V +Y
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ C + + +A + +M G+ P TY +L++A C G S F L +E++Q G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
++VTY ALI GLC +R EA E+ M + P+ SY+A+I GF +
Sbjct: 433 --------VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 244 IRELRKAFELKLEMDQKET----------CWPL------------DQDTNESLVKDLSNH 281
+ + +A EL E+ + W L + E +K +N
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK--ANS 542
Query: 282 DTFSSLVNDYCAEDKAEMALKLRYQAQYLP---DSVSYCLLLNGLHKKATSRFATRLLLF 338
+++L++ Y L L + + L V++C+L++GL K A
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 339 YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 398
L + I ++ C +N+ ++ L + +GLV P
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV----------------P 646
Query: 399 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL-YCDE 449
+ Y L+ + GNV +A + +M G + + +L+ L +C++
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 151/350 (43%), Gaps = 39/350 (11%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD +TYN LI+ C+ K L I +E Y +M L PN +Y ++ FC
Sbjct: 329 EPDVITYNALINCFCKFGK---LPIG----LEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+++A+ M GL P+ +Y+ +I CK + A + EML G+ +V Y
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI LC R+ EA +LF +M G+ P +Y+ L+ + + L +E+ +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G P L+ Y I GLC ++ + A ++ M E + + + Y+ ++ +
Sbjct: 502 G--------IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 243 R-------IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDL--------------SNH 281
+ + L + EL +E+ C +D LV +N
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 282 DTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKAT 328
F+++++ C +++ E A L Q +PD +Y L++G K+
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 165/407 (40%), Gaps = 49/407 (12%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P + + + D +EEA+ M + P S + ++ RF K +GK ++
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAK---LGKTDDV 246
Query: 106 K---VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 162
K +M+ G P V Y ++I +C + + AR LF+EM RG+ P TY+++++
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 163 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 222
F KV L D V F P ++TYNALI+ C F + LE R M
Sbjct: 307 ------FGKVGRLDDTVCF--FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 223 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD 282
L P+ VSYS ++ F + +++A + ++M + V + N
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR---------------VGLVPNEY 403
Query: 283 TFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFY 339
T++SL++ C A +L Q + V+Y L++GL + A LF
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE--LFG 461
Query: 340 IVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 399
+ IP+ Y+ LI GF ++ A + + R +P+
Sbjct: 462 KMDTAGVIPNLASYNALIH---------------GFVKAKNMDRALELLNELKGRGIKPD 506
Query: 400 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
+Y I+ C + A + EM G + L+ A +
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 7 VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVR-ELSPNETTYRCMIRLFCDRNRVE 65
VT+ LI C KN +S + V+ ++++ L N + MI C N+VE
Sbjct: 578 VTFCVLIDGLC---KNKLVS----KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 630
Query: 66 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 125
A + M +KGL P +Y+ ++ K + +AL ++ +M + G+ D+ AY L+
Sbjct: 631 AATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Query: 126 QLLCHQRRLLEARDLFQEMLLRGMSP 151
L H +L +AR +EM+ G+ P
Sbjct: 691 WGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 29/212 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNL---------------SIPYVRIVELYHQMC-------- 40
PD + Y T I C EK S+ Y +++ Y +
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 41 ---VRELSPNET--TYRCMIRLFCDRNRVEEAVGIL-RLMAEKGLSPHADSYSRIISRFC 94
++EL T T+ +I C V +AV R+ + GL +A ++ +I C
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K+ ++ A + +M+ KG+ PD AY L+ Q +LEA L +M GM
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 684
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
Y +LV + K +E+I +G P
Sbjct: 685 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 8/233 (3%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 88
++ L+ +M + + PN TY CMI FC R +A +LR M EK ++P ++S
Sbjct: 26 HINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSA 85
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
+I+ F K +++ +A E+ EML IFP Y +I C Q R+ +A+ + M +G
Sbjct: 86 LINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
SP T+ TL+ YC + E+ ++G + + VTY LIHG C
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV--------ANTVTYTTLIHGFCQ 197
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 261
D A ++L M + PD +++ +++G +ELRKAF + ++ + E
Sbjct: 198 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VT++ LI+A + K E+Y +M + P TY MI FC ++
Sbjct: 77 NPDIVTFSALINAFVKERK-------VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
RV++A +L MA KG SP ++S +I+ +CK K + +E+ EM +GI + Y
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 189
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF--------- 173
LI C L A+DL EM+ G++P T+ ++ C K E K F
Sbjct: 190 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Query: 174 ---HLQDE 178
HL+DE
Sbjct: 250 EDHHLEDE 257
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 29/267 (10%)
Query: 114 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
I DV ++ LC + A++LF EM +G+ P TY+ +++++C G +S
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 174 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 233
L +I+K +P +VT++ALI+ ++ EA EI + M + P ++
Sbjct: 66 QLLRHMIEK--------QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTIT 117
Query: 234 YSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCA 293
Y+++I GF + + A + M K C P D+ TFS+L+N YC
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASK-GCSP-----------DVV---TFSTLINGYCK 162
Query: 294 EDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSY 350
+ + +++ ++ + ++V+Y L++G + A LL I C P Y
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI--SCGVAPDY 220
Query: 351 IIYDILIEK-CANNEFKSVVELVKGFR 376
I + ++ C+ E + +++ +
Sbjct: 221 ITFHCMLAGLCSKKELRKAFAILEDLQ 247
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 184/446 (41%), Gaps = 47/446 (10%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
+P+ + NT I A + + + +M V + PN TY CMIR +CD
Sbjct: 273 VEPNLLICNTTIDVFVRANR-------LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML-DKGIFPDVHA 120
+RVEEA+ +L M KG P SY I+ CK K + + ++ +M + G+ PD
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y LI +L EA ++ +G Y +V A C +G S+ L +E++
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
KG P P +VTY A+++G C D+A ++L+ M P+ VSY+A+++G
Sbjct: 446 SKGHCP-------PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNG 498
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 300
R + +A E+ + M + E W + T ++ L S + EM
Sbjct: 499 MCRTGKSLEAREM-MNMSE-EHWWSPNSITYSVIMHGLRREGKLSEACDVV-----REMV 551
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
LK + P V LLL L + + A + + + C I ++ C
Sbjct: 552 LK-----GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGC-AINVVNFTTVIHGFC 605
Query: 361 ANNEFKSVVE-------------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGA 401
N+E + + LV +G + EA MLH+ P
Sbjct: 606 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV 665
Query: 402 VYNLLIFDHCIGGNVHKAYDMYKEML 427
Y +I +C G V + ++M+
Sbjct: 666 TYRTVIHRYCQMGKVDDLVAILEKMI 691
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 176/427 (41%), Gaps = 62/427 (14%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 109
Y M+ + + + +L LM +G+ +++SR++ + + ++ AL++ M
Sbjct: 209 VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLM 268
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
G+ P++ I + RL +A + M + G+ P TY+ ++ YC
Sbjct: 269 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRV 328
Query: 170 SKVFHLQDEVIQKGFLPYYVTSFS----------------------------PSLVTYNA 201
+ L +++ KG LP V+ ++ P VTYN
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 202 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 261
LIH L DEAL L+ E D++ YSA++ + + +A +L EM K
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 262 TCWPLDQDTNESLVKDLSNHDTFSSLVNDYC---AEDKAEMALKLRYQAQYLPDSVSYCL 318
C P + T++++VN +C DKA+ L++ + + P++VSY
Sbjct: 449 HCPP--------------DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 319 LLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMR 378
LLNG+ + S R ++ H + P+ I Y +++ G R
Sbjct: 495 LLNGMCRTGKS-LEAREMMNMSEEHWWS-PNSITYSVIMH---------------GLRRE 537
Query: 379 GLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSV 438
G ++EA M+ + + P NLL+ C G H+A +E L+ G ++ +
Sbjct: 538 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 597
Query: 439 LALIKAL 445
+I
Sbjct: 598 TTVIHGF 604
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 169/411 (41%), Gaps = 77/411 (18%)
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
++ +A+ +L LM G+ P+ + I F + + KAL M GI P+V Y
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+I+ C R+ EA +L ++M +G P +Y T++ C + +V L ++ +
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+ L P VTYN LIH L DEAL L+ E D++ YSA++
Sbjct: 376 EHGL-------VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHAL 428
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC---AEDKAE 298
+ + +A +L EM K C P + T++++VN +C DKA+
Sbjct: 429 CKEGRMSEAKDLINEMLSKGHCPP--------------DVVTYTAVVNGFCRLGEVDKAK 474
Query: 299 MALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE 358
L++ + + P++VSY LLNG+ + S R ++ H + P+ I Y +++
Sbjct: 475 KLLQVMHTHGHKPNTVSYTALLNGMCRTGKS-LEAREMMNMSEEHWWS-PNSITYSVIMH 532
Query: 359 KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 418
G R G ++EA
Sbjct: 533 ---------------GLRREGKLSEAC--------------------------------- 544
Query: 419 AYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTL-RSCNLN 468
D+ +EM+ GF + L+++L D R +E + L + C +N
Sbjct: 545 --DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 593
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 111/266 (41%), Gaps = 38/266 (14%)
Query: 4 PDCVTYNTLISAAC------EAEKNHNLS---------IPYVRIV-------------EL 35
P+ V+Y L++ C EA + N+S I Y I+ ++
Sbjct: 487 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
+M ++ P +++ C R EA + KG + + +++ +I FC+
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
N E+ AL + +M DV Y L+ L + R+ EA +L ++ML +G+ P T
Sbjct: 607 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 666
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 215
Y T++ YC G+ + + +++I S YN +I LC + +EA
Sbjct: 667 YRTVIHRYCQMGKVDDLVAILEKMI----------SRQKCRTIYNQVIEKLCVLGKLEEA 716
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGF 241
+L + D + A++ G+
Sbjct: 717 DTLLGKVLRTASRSDAKTCYALMEGY 742
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 191/477 (40%), Gaps = 63/477 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P VT N+L++ C + V L QM P+ T+ ++ N+
Sbjct: 143 PSIVTLNSLLNGFCHGNR-------ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
EAV ++ M KG P +Y +I+ CK E AL + +M I DV Y
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I LC + + +A DLF +M +G+ P TY+ L+ C G +S L ++++K
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK- 314
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD----PDEVSYSAVIS 239
+ +P LV +NALI F + + +E + EM+ PD V+Y+ +I
Sbjct: 315 -------NINPDLVFFNALIDA---FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 240 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DK 296
GF + + + + E+ EM Q+ + N T+++L++ + D
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGL---------------VGNTVTYTTLIHGFFQARDCDN 409
Query: 297 AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDIL 356
A+M K PD ++Y +LL+GL T L++F + + Y +
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN--VETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 357 IE--------------------KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNY 396
IE K + ++ GF +GL EA M
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 397 RPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
P YN LI G+ + ++ KEM GF S L+ + D R ++
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA-STFGLVTNMLHDGRLDK 583
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 183/445 (41%), Gaps = 44/445 (9%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+ L+ M P+ + ++ N+ + + + M G+S + +YS I+
Sbjct: 60 IGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINY 119
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
FC+ ++ AL + +M+ G P + L+ CH R+ EA L +M+ G P
Sbjct: 120 FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 179
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
T+ TLV + S+ L + ++ KG P LVTY A+I+GLC P
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKG--------CQPDLVTYGAVINGLCKRGEP 231
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
D AL +L M + ++ D V Y+ +I G + + + AF+L +M+ K
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK------------ 279
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
+ D+ ++ S + +Y A L + PD V + L++ K+ A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 333 TRLLLFYIVA-HCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAA----- 385
+L + + HC P + Y+ LI+ C + +E+ + RGLV
Sbjct: 340 EKLYDEMVKSKHCF--PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 386 -----RARD---------TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
+ARD M+ P+ YN+L+ C GNV A +++ M
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 432 VCHMFSVLALIKALYCDERYNEMSW 456
+ + +I+AL C E W
Sbjct: 458 KLDIVTYTTMIEAL-CKAGKVEDGW 481
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 36/323 (11%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+ D V YNT+I C+ + + +L+++M + + P+ TY +I C+
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDD-------AFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML-DKGIFPDVHAY 121
R +A +L M EK ++P ++ +I F K ++ +A ++ EM+ K FPDV AY
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD-EVI 180
LI+ C +R+ E ++F+EM RG+ TY TL+ + F +D +
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF---------FQARDCDNA 410
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
Q F P ++TYN L+ GLC + AL + M + + D V+Y+ +I
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 300
+ ++ ++L + SL N T++++++ +C + E A
Sbjct: 471 LCKAGKVEDGWDLFCSL---------------SLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 301 LKLRYQAQY---LPDSVSYCLLL 320
L + + LP+S +Y L+
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLI 538
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 47/372 (12%)
Query: 98 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 157
++ A+ + +M+ FP + + L+ + + L ++M G+S TY
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 158 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 217
+ +C + + S + ++++ G + PS+VT N+L++G C R EA+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLG--------YGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 218 ILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD 277
++ M EM PD V+++ ++ G + + +A L M K C P D
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQP-----------D 214
Query: 278 LSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGL----------- 323
L T+ +++N C + ++AL L + + D V Y +++GL
Sbjct: 215 LV---TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 324 --HKKATSRFATRLLLFYIVAHCL------TIPSYIIYDILIEKCANNEFKSVVELVKGF 375
+K T + + + CL + S ++ D+L EK N + L+ F
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML-EKNINPDLVFFNALIDAF 330
Query: 376 RMRGLVNEAARARDTMLHRNY-RPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCH 434
G + EA + D M+ + P+ YN LI C V + ++++EM G V +
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 435 MFSVLALIKALY 446
+ LI +
Sbjct: 391 TVTYTTLIHGFF 402
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 8/170 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +TYN L+ C N N+ V ++ M R++ + TY MI C +
Sbjct: 424 PDIMTYNILLDGLCN---NGNVETALV----VFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VE+ + ++ KG+ P+ +Y+ ++S FC+ +A + VEM + G P+ Y
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
LI+ + +L +EM G + T+ LV G K F
Sbjct: 537 LIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKSF 585
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 122/307 (39%), Gaps = 48/307 (15%)
Query: 194 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
PS+V ++ L+ + + D + + M + + + +YS I+ F R +L A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 254 KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYL 310
+M + S+V T +SL+N +C ++ A+ L Q Y
Sbjct: 133 LGKM--------MKLGYGPSIV-------TLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 311 PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVE 370
PD+V++ L++GL + + A L+ +V C P + Y +I
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ--PDLVTYGAVIN------------ 223
Query: 371 LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
G RG + A + M + +YN +I C ++ A+D++ +M G
Sbjct: 224 ---GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 431 FVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQLKILDEIDPERCIIYALL 490
+F+ LI L R+++ S ++ + L I+P+ AL+
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-------------NINPDLVFFNALI 327
Query: 491 DVLAEKA 497
D ++
Sbjct: 328 DAFVKEG 334
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 162/360 (45%), Gaps = 46/360 (12%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P VT+ +L++ C + + + L Q+ PN Y +I C++
Sbjct: 146 EPSIVTFGSLVNGFCHVNR-------FYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG 198
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+V A+ +L+ M + G+ P +Y+ +I+R + G + + +M+ GI PDV +
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI + + +LLEA+ + EM+ R ++P TY++L+ C+ G + + + ++ K
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
GF P+ VTYN LI+G C +R D+ ++IL M +D D +Y+ + G+
Sbjct: 319 GFF--------PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 243 RIRELRKAFELKLEMDQKETCW--PLDQDTNESLVKDLSNHD------------------ 282
+ + A ++ + + +C P D T L+ L +H
Sbjct: 371 QAGKFSAAEKV---LGRMVSCGVHP-DMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 283 ----TFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGLHKKATSRFATRL 335
T++ ++ C DK E A L PD ++Y ++ GL +K R A L
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 126/269 (46%), Gaps = 27/269 (10%)
Query: 4 PDCVTYNTLISA------ACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRL 57
PD +T++ LI EA+K +N +M R ++PN TY +I
Sbjct: 252 PDVITFSALIDVYGKEGQLLEAKKQYN-------------EMIQRSVNPNIVTYNSLING 298
Query: 58 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 117
C ++EA +L ++ KG P+A +Y+ +I+ +CK K + +++ M G+ D
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 118 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 177
Y L Q C + A + M+ G+ P T++ L++ C G+ K ++
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL-VRL 417
Query: 178 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 237
E +QK + ++TYN +I GLC + ++A + + + PD ++Y +
Sbjct: 418 EDLQK-------SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITM 470
Query: 238 ISGFRRIRELRKAFELKLEMDQKETCWPL 266
+ G RR R R+A EL +M +++ P+
Sbjct: 471 MIGLRRKRLWREAHELYRKMQKEDGLMPI 499
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 180/434 (41%), Gaps = 44/434 (10%)
Query: 26 SIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 85
SI + + L+ M P+ + ++ N+ E + + R + G+S S
Sbjct: 57 SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYS 116
Query: 86 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 145
++ +I FC+ + AL +M+ G P + +G L+ CH R EA L +++
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 146 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 205
G P Y+T++++ C KG+ + + + + G P +VTYN+LI
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG--------IRPDVVTYNSLITR 228
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
L + IL M M + PD +++SA+I + + +L +A + EM Q+
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS---- 284
Query: 266 LDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNG 322
N ++V T++SL+N C D+A+ L + + P++V+Y L+NG
Sbjct: 285 ----VNPNIV-------TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 323 LHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVN 382
K ++L ++ + + + L +G+ G +
Sbjct: 334 YCKAKRVDDGMKILC-----------------VMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 383 EAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI 442
A + M+ P+ +N+L+ C G + KA +++ V + + +I
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 443 KALYCDERYNEMSW 456
K L C E +W
Sbjct: 437 KGL-CKADKVEDAW 449
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 15/256 (5%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D VTYNTLIS + + + L M R++ PN + +I F +
Sbjct: 218 DAVTYNTLISGLSNSGR-------WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EA + + M + + P+ +Y+ +I+ FC + +G A M M+ KG FPDV Y L
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I C +R+ + LF EM +G+ TY+TL+ YC G+ + V QK F
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN--------VAQKVF 382
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
SP +VTYN L+ LC + ++AL ++ + + +D D ++Y+ +I G R
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 245 RELRKAFELKLEMDQK 260
+L++A+ L + +K
Sbjct: 443 DKLKEAWCLFRSLTRK 458
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 173/410 (42%), Gaps = 50/410 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P VT +L++ C+ + + V L M PN Y +I C
Sbjct: 147 PSIVTLGSLLNGFCQGNR-------FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ + M +KG+ A +Y+ +IS + A + +M+ + I P+V +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI + LLEAR+L++EM+ R + P TY++L+ +C+ G ++ D ++ KG
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P +VTYN LI G C +R ++ +++ M L D +Y+ +I G+ +
Sbjct: 320 CF--------PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
KL + QK +D + +V T++ L++ C K E AL +
Sbjct: 372 AG--------KLNVAQKVFNRMVDCGVSPDIV-------TYNILLDCLCNNGKIEKALVM 416
Query: 304 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
+++ D ++Y +++ GL + T + LF + P I Y
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCR--TDKLKEAWCLFRSLTRKGVKPDAIAY------- 467
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDH 410
+ ++ G +GL EA + M + P +Y+ + DH
Sbjct: 468 --------ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 158/396 (39%), Gaps = 43/396 (10%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
L+ +M P+ + ++ + N+ + + + M G+S S++ +I F
Sbjct: 65 SLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCF 124
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
C+ + AL + +M+ G P + G L+ C R EA L M G P
Sbjct: 125 CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNV 184
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
Y+T++ C + + + + +KG VTYN LI GL R
Sbjct: 185 VIYNTVINGLCKNRDLNNALEVFYCMEKKG--------IRADAVTYNTLISGLSNSGRWT 236
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 273
+A +LR M + +DP+ + ++A+I F + L +A L EM ++
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV----------- 285
Query: 274 LVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSR 330
+ N T++SL+N +C A+ L PD V+Y L+ G K + R
Sbjct: 286 ----VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK--SKR 339
Query: 331 FATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDT 390
+ LF + + + Y+ LI G+ G +N A + +
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIH---------------GYCQAGKLNVAQKVFNR 384
Query: 391 MLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
M+ P+ YN+L+ C G + KA M +++
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 189/466 (40%), Gaps = 65/466 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVREL----SPNETTYRCMIRLFC 59
PD VT+N+ ISA C+ K + S ++ M + E PN TY M++ FC
Sbjct: 250 PDIVTFNSRISALCKEGKVLDAS-------RIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
+E+A + + E SY+ + ++ + +A + +M DKGI P ++
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
+Y +L+ LC L +A+ + M G+ P TY L+ YC G+ L E+
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
++ LP + T N L+H L R EA E+LR M E D V+ + ++
Sbjct: 423 MRNNCLP--------NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 240 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEM 299
G EL KA E+ M + + + +L N ++ LV+D E+
Sbjct: 475 GLCGSGELDKAIEIVKGM----------RVHGSAALGNLGN--SYIGLVDDSLIENNC-- 520
Query: 300 ALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
LPD ++Y LLNGL K RFA LF + P + Y+I I
Sbjct: 521 ----------LPDLITYSTLLNGLCK--AGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHH 568
Query: 360 -CANNEFKSVVELVK-------------------GFRMRGLVNEAARARDTMLHRNYRPE 399
C + S ++K G ++ + E D M + P
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Query: 400 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
YN I C G V A ++ EM+ ++FS LI+A
Sbjct: 629 ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 201/482 (41%), Gaps = 86/482 (17%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P T+N LI A C++ + R EL+ +M + PNE T+ ++R +C
Sbjct: 145 PQTYTFNLLIRALCDSS-----CVDAAR--ELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ + +L M G+ P+ Y+ I+S FC+ + +M +M ++G+ PD+ +
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 124 LIQLLCHQRRLLEARDLFQEMLLR---GMS-PGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
I LC + ++L+A +F +M L G+ P TY+ +++ +C G L + +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
+ L SL +YN + GL + EA +L+ M + + P SY+ ++
Sbjct: 318 RENDDLA--------SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Query: 240 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEM 299
G ++ L A + M + C + T+ L++ YC+ K +
Sbjct: 370 GLCKLGMLSDAKTIVGLMKRNGVC---------------PDAVTYGCLLHGYCSVGKVDA 414
Query: 300 A---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLL-FYIVAHCL-TIPSYIIYD 354
A L+ + LP++ + +LL+ L K A LL + L T+ II D
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 355 ILIEKCANNEFKSVVELVKGFRMRG-------------LVNEA----------------- 384
L C + E +E+VKG R+ G LV+++
Sbjct: 475 GL---CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 385 ---------ARARD---TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
A A++ M+ +P+ YN+ I C G + A+ + K+M G
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG-- 589
Query: 433 CH 434
CH
Sbjct: 590 CH 591
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 183/436 (41%), Gaps = 61/436 (13%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
LY M + ++P T+ +IR CD + V+ A + M EKG P+ ++ ++ +C
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K K LE+ M G+ P+ Y ++ C + R ++ + ++M G+ P
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 155 TYDTLVEAYCLKGEF---SKVF---------------HLQDEVIQKGF-----LPYYVTS 191
T+++ + A C +G+ S++F + ++ KGF L T
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 192 FS--------PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
F SL +YN + GL + EA +L+ M + + P SY+ ++ G +
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA--- 300
+ L A + M + C + T+ L++ YC+ K + A
Sbjct: 374 LGMLSDAKTIVGLMKRNGVC---------------PDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL-LFYIVAHCL-TIPSYIIYDILIE 358
L+ + LP++ + +LL+ L K A LL + L T+ II D L
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL-- 476
Query: 359 KCANNEFKSVVELVKGFRMRG------LVNE-AARARDTMLHRNYRPEGAVYNLLIFDHC 411
C + E +E+VKG R+ G L N D+++ N P+ Y+ L+ C
Sbjct: 477 -CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLC 535
Query: 412 IGGNVHKAYDMYKEML 427
G +A +++ EM+
Sbjct: 536 KAGRFAEAKNLFAEMM 551
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 134/322 (41%), Gaps = 37/322 (11%)
Query: 24 NLSIPYVRIVE--LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSP 81
NL Y+ +V+ L C+ P+ TY ++ C R EA + M + L P
Sbjct: 502 NLGNSYIGLVDDSLIENNCL----PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Query: 82 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 141
+ +Y+ I FCK ++ A + +M KG + Y LI L + ++ E L
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617
Query: 142 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 201
EM +G+SP TY+T ++ C + +L DE++QK + +P++ ++
Sbjct: 618 DEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK--------NIAPNVFSFKY 669
Query: 202 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 261
LI C D A E+ + E YS + + +L KA EL E
Sbjct: 670 LIEAFCKVPDFDMAQEVFETAVS-ICGQKEGLYSLMFNELLAAGQLLKATEL------LE 722
Query: 262 TCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCL 318
+ L KD LV C +D+ E+A + ++ Y D +
Sbjct: 723 AVLDRGFELGTFLYKD---------LVESLCKKDELEVASGILHKMIDRGYGFDPAALMP 773
Query: 319 LLNGL----HKKATSRFATRLL 336
+++GL +KK + FA +++
Sbjct: 774 VIDGLGKMGNKKEANSFADKMM 795
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 167/448 (37%), Gaps = 105/448 (23%)
Query: 1 MTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIR 56
MTD P +YN L+ C+ + IV L + V P+ TY C++
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKL----GMLSDAKTIVGLMKRNGV---CPDAVTYGCLLH 404
Query: 57 LFCD---------------RN--------------------RVEEAVGILRLMAEKGLSP 81
+C RN R+ EA +LR M EKG
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 82 HADSYSRIISRFCKNKEMGKALE----MKV-------------------EMLDKGIFPDV 118
+ + I+ C + E+ KA+E M+V +++ PD+
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 119 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 178
Y L+ LC R EA++LF EM+ + P Y+ + +C +G+ S F + +
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 179 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
+ +KG SL TYN+LI GL + E ++ M E + P+ +Y+ I
Sbjct: 585 MEKKG--------CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI 636
Query: 239 SGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC------ 292
++ A L EM QK N +F L+ +C
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIA---------------PNVFSFKYLIEAFCKVPDFD 681
Query: 293 -AEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYI 351
A++ E A+ + Q + L Y L+ N L AT LL ++ + +++
Sbjct: 682 MAQEVFETAVSICGQKEGL-----YSLMFNELLAAGQLLKATELLE-AVLDRGFELGTFL 735
Query: 352 IYDILIEKCANNEFKSVVELVKGFRMRG 379
D++ C +E + ++ RG
Sbjct: 736 YKDLVESLCKKDELEVASGILHKMIDRG 763
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 190/448 (42%), Gaps = 47/448 (10%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P +YNTL++A EA++ +V++ L+ ++PN TY +I++ C +
Sbjct: 111 EPAIRSYNTLLNAFVEAKQ-------WVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK 163
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
E+A G L M ++G P SYS +I+ K ++ ALE+ EM ++G+ PDV Y
Sbjct: 164 EFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYN 223
Query: 123 LLIQLLCHQRRLLEARDLFQEMLL-RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+LI ++ A +L+ +L + P +T++ ++ G + + + Q
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
L TY++LIHGLC D+A + + E D V+Y+ ++ GF
Sbjct: 284 --------NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
R +++++ EL M+ K + ++ + L+K L + D+A M
Sbjct: 336 CRCGKIKESLELWRIMEHKNS---VNIVSYNILIKGLLENGKI----------DEATMIW 382
Query: 302 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL--LFYIVAHCLTIPSYIIYDILIEK 359
+L Y D +Y + ++GL A ++ + H I D L +K
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 360 CANNEFKSVVE----------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 403
E ++V+ L+ G + EA+ M RP Y
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 404 NLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
N+LI C G +A KEML G+
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGW 530
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 156/357 (43%), Gaps = 36/357 (10%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D VTYNT++ C K S+ RI+E + S N +Y +I+ + ++
Sbjct: 324 DVVTYNTMLGGFCRCGKIKE-SLELWRIME-------HKNSVNIVSYNILIKGLLENGKI 375
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+EA I RLM KG + +Y I C N + KAL + E+ G DV+AY +
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I LC ++RL EA +L +EM G+ + L+ + E+ + G
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG- 494
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
P++V+YN LI GLC + EA ++ M E PD +YS ++ G R
Sbjct: 495 -------CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 304
R++ A EL W Q L D+ H+ L++ C+ K + A+ +
Sbjct: 548 RKIDLALEL----------W--HQFLQSGLETDVMMHNI---LIHGLCSVGKLDDAMTVM 592
Query: 305 YQAQY---LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE 358
++ + V+Y L+ G K S AT ++ Y+ L P I Y+ +++
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT-VIWGYMYKMGLQ-PDIISYNTIMK 647
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 184/434 (42%), Gaps = 49/434 (11%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRI 89
RIVEL +E +E +I+ + + ++A+ + + M E G P SY+ +
Sbjct: 64 RIVELIRS---QECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTL 120
Query: 90 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 149
++ F + K+ K + G+ P++ Y +LI++ C ++ +AR M G
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGF 180
Query: 150 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 209
P +Y T++ G+ L DE+ ++G +P + YN LI G
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERG--------VAPDVTCYNILIDGFLKE 232
Query: 210 QRPDEALEIL-RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 268
+ A+E+ R + + + P+ +++ +ISG + + ++ M Q E
Sbjct: 233 KDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER------ 286
Query: 269 DTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 325
KDL T+SSL++ C DKAE + + D V+Y +L G +
Sbjct: 287 ------EKDLY---TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 326 KATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 385
+ L L+ I+ H ++ + + Y+ILI KG G ++EA
Sbjct: 338 --CGKIKESLELWRIMEHKNSV-NIVSYNILI---------------KGLLENGKIDEAT 379
Query: 386 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
M + Y + Y + I C+ G V+KA + +E+ G +++ ++I L
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439
Query: 446 YCDERYNEMSWVIR 459
+R E S +++
Sbjct: 440 CKKKRLEEASNLVK 453
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 184/473 (38%), Gaps = 90/473 (19%)
Query: 49 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 108
Y ++R + V I+ L+ + D +I + KN +AL++
Sbjct: 44 VVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKR 103
Query: 109 MLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 167
M + G P + +Y L+ ++ ++ LF G++P +TY+ L++ C K
Sbjct: 104 MREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK 163
Query: 168 EFSKVFHLQDEVIQKGFLPY-YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
EF K +GFL + + F P + +Y+ +I+ L + D+ALE+ M E
Sbjct: 164 EFEKA---------RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD---- 282
+ PD Y+ +I GF + ++ + A EL + + + +P + T+ ++ LS
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP-NVKTHNIMISGLSKCGRVDD 273
Query: 283 ------------------TFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLN 321
T+SSL++ C DKAE + + D V+Y +L
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 322 GLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLV 381
G + + L L+ I+ H ++ + + Y+ILI KG G +
Sbjct: 334 GFCR--CGKIKESLELWRIMEHKNSV-NIVSYNILI---------------KGLLENGKI 375
Query: 382 NEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY--------------------- 420
+EA M + Y + Y + I C+ G V+KA
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 421 --------------DMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 459
++ KEM +G + ALI L D R E S+ +R
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 15/249 (6%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D Y ++I C+ ++ S L +M + N +I +R+
Sbjct: 428 DVYAYASIIDCLCKKKRLEEAS-------NLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EA LR M + G P SY+ +I CK + G+A EML+ G PD+ Y +L
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
+ LC R++ A +L+ + L G+ ++ L+ C G+ + + +
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR-- 598
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
+ + +LVTYN L+ G + A I M +M L PD +SY+ ++ G
Sbjct: 599 ------NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652
Query: 245 RELRKAFEL 253
R + A E
Sbjct: 653 RGVSYAMEF 661
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TY+ L+ C ++ +L++ EL+HQ L + + +I C +
Sbjct: 532 PDLKTYSILLCGLCR-DRKIDLAL------ELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+++A+ ++ M + + + +Y+ ++ F K + +A + M G+ PD+ +Y
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 162
+++ LC R + A + F + G+ P T++ LV A
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 190/447 (42%), Gaps = 66/447 (14%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ TYN L+ A C KN+ + +VE+ ++ C P+ +Y +I C+
Sbjct: 178 EPNVFTYNVLLKALC---KNNKVDGAKKLLVEMSNKGC----CPDAVSYTTVISSMCEVG 230
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
V+E R +AE+ P Y+ +I+ CK + A E+ EM++KGI P+V +Y
Sbjct: 231 LVKEG----RELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI +LC+ ++ A +ML RG P T +LV+ L+G L +++I +
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-R 344
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
GF P++V YN L+ G C +A+ + M E+ P+ +Y ++I+GF
Sbjct: 345 GF------GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTN--------------ESLVKDLSNHD------ 282
+ L A + +M C + TN ESL++ +S +
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 283 TFSSLVNDYCAEDKAEMALK----LRYQAQYLPDSVSYCLLLNGLHKKATSRFA---TRL 335
TF++ + C + + A K + Q + P+ V+Y LL+GL K A TR
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 336 LLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRN 395
+ V S Y+ L+ N GL A + M+
Sbjct: 519 IFMRGVEW-----SSSTYNTLLHGSCN---------------AGLPGIALQLVGKMMVDG 558
Query: 396 YRPEGAVYNLLIFDHCIGGNVHKAYDM 422
P+ N++I +C G +A M
Sbjct: 559 KSPDEITMNMIILAYCKQGKAERAAQM 585
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 169/400 (42%), Gaps = 49/400 (12%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
R VE+++++ P+ Y ++ NR++ + R M G P+ +Y+ ++
Sbjct: 129 RAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLL 188
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
CKN ++ A ++ VEM +KG PD +Y +I +C + E R+L +
Sbjct: 189 KALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FE 243
Query: 151 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 210
P Y+ L+ C + ++ F L E+++KG SP++++Y+ LI+ LC
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKG--------ISPNVISYSTLINVLCNSG 295
Query: 211 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 270
+ + A L M + P+ + S+++ G A +L +M + P
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP----- 350
Query: 271 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKA 327
N +++LV +C+ A+ + + + P+ +Y L+NG K+
Sbjct: 351 ---------NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 328 TSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAAR 386
+ A + + + C P+ ++Y ++E C +++FK EA
Sbjct: 402 SLDGAVYIWNKMLTSGC--CPNVVVYTNMVEALCRHSKFK----------------EAES 443
Query: 387 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
+ M N P +N I C G + A ++++M
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 146/334 (43%), Gaps = 36/334 (10%)
Query: 33 VELYHQMCVRE--LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
++L++QM +R L PN Y +++ FC + +AV + M E G SP+ +Y +I
Sbjct: 336 LDLWNQM-IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
+ F K + A+ + +ML G P+V Y +++ LC + EA L + M +
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 151 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 210
P T++ ++ C G + ++ Q+ P P++VTYN L+ GL
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP-------PNIVTYNELLDGLAKAN 507
Query: 211 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL--KLEMDQKETCWPLDQ 268
R +EA + R + ++ +Y+ ++ G A +L K+ +D K
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKS------- 560
Query: 269 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR-----YQAQYLPDSVSYCLLLNGL 323
+ T + ++ YC + KAE A ++ + ++ PD +SY ++ GL
Sbjct: 561 ----------PDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGL 610
Query: 324 HKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
+ LL I A +PS + +LI
Sbjct: 611 CRSNCREDGVILLERMISAG--IVPSIATWSVLI 642
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 14/239 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V Y ++ A C K + L M +P+ T+ I+ CD R
Sbjct: 420 PNVVVYTNMVEALCRHSK-------FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 64 VEEAVGILRLMAEKG-LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ A + R M ++ P+ +Y+ ++ K + +A + E+ +G+ Y
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+ C+ A L +M++ G SP T + ++ AYC +G+ + + D
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD----- 587
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+ + P +++Y +I GLC ++ + +L M + P ++S +I+ F
Sbjct: 588 -LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 140/385 (36%), Gaps = 84/385 (21%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 109
T+ MIR +V+ +L+ M +G D + +IS + + +A+EM +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
+ G P V Y ++ L + R+ ++++M G
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG--------------------- 176
Query: 170 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 229
F P++ TYN L+ LC + D A ++L M P
Sbjct: 177 ----------------------FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 214
Query: 230 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN 289
D VSY+ VIS + +++ EL + E +V +++L+N
Sbjct: 215 DAVSYTTVISSMCEVGLVKEGRELA--------------ERFEPVV------SVYNALIN 254
Query: 290 DYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLT 346
C E + A +L + P+ +SY L+N L A L
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT--------- 305
Query: 347 IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHR-NYRPEGAVYNL 405
+L C N + ++ LVKG +RG +A + M+ +P YN
Sbjct: 306 -------QMLKRGCHPNIY-TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 406 LIFDHCIGGNVHKAYDMYKEMLHYG 430
L+ C GN+ KA ++ M G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIG 382
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 168/362 (46%), Gaps = 44/362 (12%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
+ P+ T ++ FC N +++AV + M + G+ + +I CKN+ + AL
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
E+ M D+GI P+V Y LI LC RL +A EM + ++P T+ L++AY
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
+G+ SKV + +IQ S P++ TY++LI+GLC R DEA+++L M
Sbjct: 129 AKRGKLSKVDSVYKMMIQ--------MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 224 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 283
P+ V+YS + +GF + + +L +M Q+ +N +
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVA---------------ANTVS 225
Query: 284 FSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLH-----KKATSRF---- 331
++L+ Y K ++AL + +P+ SY ++L GL +KA SRF
Sbjct: 226 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ 285
Query: 332 ATR----LLLFYIVAH-----CLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVN 382
TR ++ + I+ H C+ +Y ++ L K +FK+ ++ G+
Sbjct: 286 KTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRT 345
Query: 383 EA 384
EA
Sbjct: 346 EA 347
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 144/338 (42%), Gaps = 33/338 (9%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D V LI C+ + L +P +E+ +M R +SPN TY +I C R+
Sbjct: 47 DVVVDTILIDTLCK----NRLVVP---ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRL 99
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+A L M K ++P+ ++S +I + K ++ K + M+ I P+V Y L
Sbjct: 100 ADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 159
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I LC R+ EA + M+ +G +P TY TL + L D++ Q+G
Sbjct: 160 IYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG- 218
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
+ + V+ N LI G + D AL + M L P+ SY+ V++G
Sbjct: 219 -------VAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN 271
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 304
E+ KA + E QK DL + T++ +++ C + A L
Sbjct: 272 GEVEKALS-RFEHMQKTR-------------NDL-DIITYTIMIHGMCKACMVKEAYDLF 316
Query: 305 YQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFY 339
Y+ ++ PD +Y +++ L++ A L FY
Sbjct: 317 YKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFY 354
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 121/250 (48%), Gaps = 15/250 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTY++LI+ C K+ L+ R+ H+M ++++PN T+ +I + R +
Sbjct: 81 PNVVTYSSLITGLC---KSGRLADAERRL----HEMDSKKINPNVITFSALIDAYAKRGK 133
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ + + ++M + + P+ +YS +I C + + +A++M M+ KG P+V Y
Sbjct: 134 LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 193
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L R+ + L +M RG++ + +TL++ Y G+ + + G
Sbjct: 194 LANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNG 253
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ P++ +YN ++ GL ++AL M + D D ++Y+ +I G +
Sbjct: 254 LI--------PNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCK 305
Query: 244 IRELRKAFEL 253
+++A++L
Sbjct: 306 ACMVKEAYDL 315
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 136/359 (37%), Gaps = 84/359 (23%)
Query: 74 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 133
M + G+ P + S +++ FC + + A+ + +M GI DV +LI LC R
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 134 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 193
++ A ++ + M RG+S
Sbjct: 64 VVPALEVLKRMKDRGIS------------------------------------------- 80
Query: 194 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA--- 250
P++VTY++LI GLC R +A L M ++P+ +++SA+I + + +L K
Sbjct: 81 PNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSV 140
Query: 251 FELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK---LRYQA 307
+++ ++M + T+SSL+ C ++ + A+K L
Sbjct: 141 YKMMIQMSIDPNVF------------------TYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 308 QYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKS 367
P+ V+Y L NG K + +LL D + ++ S
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLL-----------------DDMPQRGVAANTVS 225
Query: 368 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
L+KG+ G ++ A M P YN+++ G V KA ++ M
Sbjct: 226 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 100/241 (41%), Gaps = 50/241 (20%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
DP+ TY++LI C HN +++++L M + +PN TY + F +
Sbjct: 150 DPNVFTYSSLIYGLCM----HNRVDEAIKMLDL---MISKGCTPNVVTYSTLANGFFKSS 202
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
RV++ + +L M ++G++ + S + +I + + ++ AL + M G+ P++ +Y
Sbjct: 203 RVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYN 262
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+ +L G+ G L S+ H+Q
Sbjct: 263 I---------------------VLAGLFANGEVEKAL----------SRFEHMQK----- 286
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
T ++TY +IHG+C EA ++ + ++PD +Y+ +I+
Sbjct: 287 -------TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELN 339
Query: 243 R 243
R
Sbjct: 340 R 340
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 26/310 (8%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 88
Y + +L +M + PN Y I C N++EEA + LM + G+ P+ +YS
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
+I +CK + +A + E+L + P+V +G L+ C R L+ AR LF M+ G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
+ P Y+ L+ +C G + L E+ + SP + TY LI+GLC
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES--------LNLSPDVFTYTILINGLCI 386
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 268
+ EA + + M + P +Y+++I G+ + + +A +L EM
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV------ 440
Query: 269 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHK 325
N TFS+L++ YC + A+ L ++ +PD V+Y L++ K
Sbjct: 441 ---------EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 326 KATSRFATRL 335
+A + A RL
Sbjct: 492 EANMKEALRL 501
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 162/389 (41%), Gaps = 48/389 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V + TL+ C+A + V L+ M + PN Y C+I C
Sbjct: 302 PNVVVFGTLVDGFCKARE-------LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ EAVG+L M LSP +Y+ +I+ C ++ +A + +M ++ IFP Y
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C + + +A DL EM G+ P T+ TL++ YC + L E+ KG
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ P +VTY ALI EAL + M E + P++ +++ ++ GF +
Sbjct: 475 IV--------PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED---KAEMA 300
L A + E +Q+ +CW NH F+ L+ C +A
Sbjct: 527 EGRLSVAIDFYQENNQQRSCW---------------NHVGFTCLIEGLCQNGYILRASRF 571
Query: 301 LKLRYQAQYLPDSVSYCLLLNG-LHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
PD SY +L G L +K R ++L C I + I+ ++L+ +
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEK---RITDTMML-----QCDMIKTGILPNLLVNQ 623
Query: 360 C------ANNEFKSVVELVKGFRMRGLVN 382
AN KS L R++ + N
Sbjct: 624 LLARFYQANGYVKSACFLTNSSRLKTVSN 652
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 176/442 (39%), Gaps = 58/442 (13%)
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
Y M R L P+ Y + + + + +L M G+ P+ Y+ I C+
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
+ +M +A +M M G+ P+++ Y +I C + +A L++E+L+ + P
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 215
+ TLV+ +C E L +++ G P+L YN LIHG C EA
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFG--------VDPNLYVYNCLIHGHCKSGNMLEA 358
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
+ +L M + L PD +Y+ +I+G ++ +A L +M + E +P
Sbjct: 359 VGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM-KNERIFP---------- 407
Query: 276 KDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
+ T++SL++ YC E E AL L + P+ +++ L++G + A
Sbjct: 408 ----SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 392
L + +P + Y LI+ FK + EA R ML
Sbjct: 464 MGLYFEMTIKG--IVPDVVTYTALIDA----HFK-----------EANMKEALRLYSDML 506
Query: 393 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE-------MLHYGFVCHMFSVLALIKAL 445
P + L+ G + A D Y+E H GF C LI+ L
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTC-------LIEGL 559
Query: 446 YCDERYNEMSWVIRNTLRSCNL 467
C Y + + +RSC +
Sbjct: 560 -CQNGYILRASRFFSDMRSCGI 580
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
+P+ +T++TLI C + LY +M ++ + P+ TY +I
Sbjct: 440 VEPNIITFSTLIDGYCNVRD-------IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
++EA+ + M E G+ P+ +++ ++ F K + A++ E + + +
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGF 552
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
LI+ LC +L A F +M G++P +Y ++++ + + + LQ ++I+
Sbjct: 553 TCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIK 612
Query: 182 KGFLP-YYVTSFSPSLVTYNALIHGLCFF 209
G LP V N + CF
Sbjct: 613 TGILPNLLVNQLLARFYQANGYVKSACFL 641
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 183/446 (41%), Gaps = 39/446 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETT-YRCMIRLFCDRN 62
PD +TY L+ C+ N+ + V L M R N M+ C
Sbjct: 325 PDVITYTILLCGQCQLG---NIDMGLV----LLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R++EA+ + M GLSP +YS +I CK + AL + EM DK I P+ +G
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+ LC + LLEAR L ++ G + Y+ +++ Y G + L VI+
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G +PS+ T+N+LI+G C Q EA +IL + L P VSY+ ++ +
Sbjct: 498 G--------ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS---NHDTFSSLVNDYCAEDKAEM 299
+ EL+ EM K P T + K L H+ + ++ + E K +
Sbjct: 550 NCGNTKSIDELRREM--KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE-KCKQ 606
Query: 300 ALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
L+ PD ++Y ++ L + + + I+ S Y+ILI+
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCR--VKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
+ G + +A ++ +N Y LI HC+ G+ A
Sbjct: 665 LC---------------VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKAL 445
++ ++LH GF + A+I L
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVINRL 735
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 177/402 (44%), Gaps = 44/402 (10%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 106
NE TY ++ C + ++E+AV LR K + P S++ I+S +CK + A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
+L G+ P V+++ +LI LC + EA +L +M G+ P TY+ L + + L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G S + + +++ KG SP ++TY L+ G C D L +L+ M
Sbjct: 306 GMISGAWEVIRDMLDKG--------LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 227 LDPDE-VSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 285
+ + + S ++SG + + +A L +Q + L DL +S
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSL------------FNQMKADGLSPDLV---AYS 402
Query: 286 SLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVA 342
+++ C K +MAL L + + LP+S ++ LL GL +K R LL +++
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM-LLEARSLLDSLIS 461
Query: 343 HCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 402
T+ ++Y+I+I+ G+ G + EA ++ P A
Sbjct: 462 SGETL-DIVLYNIVID---------------GYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 403 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 444
+N LI+ +C N+ +A + + YG + S L+ A
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 47/242 (19%)
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
D++L IL+ M + L+ SY++V+ F RE K +++ E+ K
Sbjct: 141 DDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK------------ 185
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATS 329
N T+S++V+ C + K E A+ +++ P VS+ +++G K
Sbjct: 186 -------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 330 RFATRLLLFYIVAHCLTIPSYIIYDILIE------------KCANNEFKSVVE------- 370
A F V C +PS ++ILI + A++ K VE
Sbjct: 239 DMAKS--FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 371 -LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHY 429
L KGF + G+++ A ML + P+ Y +L+ C GN+ + K+ML
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 430 GF 431
GF
Sbjct: 357 GF 358
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLS-IPYVRIVELYHQ----MCVRELSPNETTYRCMIRLF 58
P VTY+ + C K+ N + + RI E Q M + P++ TY +I+
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 59 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 118
C + A L +M + L + +Y+ +I C + KA + ++ +
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 119 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
AY LI+ C + A LF ++L RG + R Y ++ C
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 183/446 (41%), Gaps = 39/446 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETT-YRCMIRLFCDRN 62
PD +TY L+ C+ N+ + V L M R N M+ C
Sbjct: 325 PDVITYTILLCGQCQL---GNIDMGLV----LLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R++EA+ + M GLSP +YS +I CK + AL + EM DK I P+ +G
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+ LC + LLEAR L ++ G + Y+ +++ Y G + L VI+
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G +PS+ T+N+LI+G C Q EA +IL + L P VSY+ ++ +
Sbjct: 498 G--------ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS---NHDTFSSLVNDYCAEDKAEM 299
+ EL+ EM K P T + K L H+ + ++ + E K +
Sbjct: 550 NCGNTKSIDELRREM--KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE-KCKQ 606
Query: 300 ALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
L+ PD ++Y ++ L + + + I+ S Y+ILI+
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCR--VKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
+ G + +A ++ +N Y LI HC+ G+ A
Sbjct: 665 LC---------------VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKAL 445
++ ++LH GF + A+I L
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVINRL 735
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 177/402 (44%), Gaps = 44/402 (10%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 106
NE TY ++ C + ++E+AV LR K + P S++ I+S +CK + A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
+L G+ P V+++ +LI LC + EA +L +M G+ P TY+ L + + L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G S + + +++ KG SP ++TY L+ G C D L +L+ M
Sbjct: 306 GMISGAWEVIRDMLDKG--------LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 227 LDPDE-VSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 285
+ + + S ++SG + + +A L +Q + L DL +S
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSL------------FNQMKADGLSPDLV---AYS 402
Query: 286 SLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVA 342
+++ C K +MAL L + + LP+S ++ LL GL +K R LL +++
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM-LLEARSLLDSLIS 461
Query: 343 HCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 402
T+ ++Y+I+I+ G+ G + EA ++ P A
Sbjct: 462 SGETL-DIVLYNIVID---------------GYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 403 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 444
+N LI+ +C N+ +A + + YG + S L+ A
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 47/242 (19%)
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
D++L IL+ M + L+ SY++V+ F RE K +++ E+ K
Sbjct: 141 DDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK------------ 185
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATS 329
N T+S++V+ C + K E A+ +++ P VS+ +++G K
Sbjct: 186 -------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 330 RFATRLLLFYIVAHCLTIPSYIIYDILIE------------KCANNEFKSVVE------- 370
A F V C +PS ++ILI + A++ K VE
Sbjct: 239 DMAKS--FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 371 -LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHY 429
L KGF + G+++ A ML + P+ Y +L+ C GN+ + K+ML
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 430 GF 431
GF
Sbjct: 357 GF 358
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLS-IPYVRIVELYHQ----MCVRELSPNETTYRCMIRLF 58
P VTY+ + C K+ N + + RI E Q M + P++ TY +I+
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 59 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 118
C + A L +M + L + +Y+ +I C + KA + ++ +
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 119 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
AY LI+ C + A LF ++L RG + R Y ++ C
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 198/476 (41%), Gaps = 62/476 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P +T+NT++ + +A R+ +++ +M R + +E TY +I F +
Sbjct: 236 PTVITFNTMLDSCFKAGDLE-------RVDKIWLEMKRRNIEFSEVTYNILINGFSKNGK 288
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+EEA M G + S++ +I +CK A + EML+ GI+P Y +
Sbjct: 289 MEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNI 348
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
I LC R+ +AR+L M +P +Y+TL+ Y G+F + L D++
Sbjct: 349 YICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDL---- 400
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
PS+VTYN LI GLC + A + M L+ PD ++Y+ ++ GF +
Sbjct: 401 ----RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Query: 244 IRELRKAFELKLEMDQKE--------TCWPL------DQDTNESLVKDLSNHD------- 282
L A E+ EM +K T + D D L +++ D
Sbjct: 457 NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLT 516
Query: 283 TFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFY 339
++ ++ C A++ + ++ +PD V+Y ++ G + + A L
Sbjct: 517 IYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL---- 572
Query: 340 IVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 399
YD ++ K + L+ G G + +A + M R RP
Sbjct: 573 -------------YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 400 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCD-ERYNEM 454
+N L++ C GN+ +AY +M G + +S LI CD E++ E+
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK-NCDFEKWEEV 674
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 175/414 (42%), Gaps = 50/414 (12%)
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
+ +M + P+ ++++ D + +A + M E G+ P +++ ++ K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 96 NKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
++ + ++ +EM + I F +V Y +LI ++ EAR +M G +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEV-TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 214
+++ L+E YC +G F + + DE++ G P+ TYN I LC F R D+
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIY--------PTTSTYNIYICALCDFGRIDD 361
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 274
A E+L M PD VSY+ ++ G+ + + K E L D D + S+
Sbjct: 362 ARELLSSMAA----PDVVSYNTLMHGYIK---MGKFVEASLLFDDLRA-----GDIHPSI 409
Query: 275 VKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRF 331
V T+++L++ C E A +L+ + PD ++Y L+ G K
Sbjct: 410 V-------TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 462
Query: 332 ATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTM 391
AT +YD ++ K + + G G ++A R + M
Sbjct: 463 ATE-----------------VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM 505
Query: 392 LHRNYR-PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 444
+ ++ P+ +YN+ I C GN+ KA + +++ G V + +I+
Sbjct: 506 VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 139/341 (40%), Gaps = 72/341 (21%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
M PD V+YNTL+ + K +V L+ + ++ P+ TY +I C+
Sbjct: 369 MAAPDVVSYNTLMHGYIKMGK-------FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE 421
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+E A + M + + P +Y+ ++ F KN + A E+ EML KGI PD +A
Sbjct: 422 SGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYA 481
Query: 121 Y------------------------------------GLLIQLLCHQRRLLEARDLFQEM 144
Y + I LC L++A + +++
Sbjct: 482 YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 541
Query: 145 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF------------ 192
G+ P TY T++ Y G+F +L DE+++K P +T F
Sbjct: 542 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRL 601
Query: 193 ---------------SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 237
P+++T+NAL++G+C DEA L M E + P++ SY+ +
Sbjct: 602 EQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Query: 238 ISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDL 278
IS + + +L EM KE D T+ +L K L
Sbjct: 662 ISKNCDFEKWEEVVKLYKEMLDKEI--EPDGYTHRALFKHL 700
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 51/283 (18%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQM---------------CVREL---- 44
PD +TY TL+ KN NLS+ E+Y +M V EL
Sbjct: 442 PDVITYTTLVKGFV---KNGNLSMA----TEVYDEMLRKGIKPDGYAYTTRAVGELRLGD 494
Query: 45 -----------------SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 87
+P+ T Y I C + +A+ R + GL P +Y+
Sbjct: 495 SDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYT 554
Query: 88 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 147
+I + +N + A + EML K ++P V Y +LI RL +A EM R
Sbjct: 555 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 148 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 207
G+ P T++ L+ C G + + ++ ++G +P P+ +Y LI C
Sbjct: 615 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-IP-------PNKYSYTMLISKNC 666
Query: 208 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 250
F++ +E +++ + M + ++PD ++ A+ + E R+
Sbjct: 667 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV 709
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P +TY LI +A + + + +M R + PN T+ ++ C
Sbjct: 583 PSVITYFVLIYGHAKAGRLE-------QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 635
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++EA L M E+G+ P+ SY+ +IS+ C ++ + +++ EMLDK I PD + +
Sbjct: 636 IDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRA 695
Query: 124 LIQLLCHQRRLLEARDL-FQEMLL 146
L + H + E+R++ F E LL
Sbjct: 696 LFK---HLEKDHESREVEFLERLL 716
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 178/401 (44%), Gaps = 51/401 (12%)
Query: 57 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 116
LFC + +V+ A L++M +KG+ P+ Y+ ++ C+ K M A + EML+KG+ P
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 117 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 176
+ Y +LI + A D+ +M Y+T++ C G+ SK +
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 177 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 236
+I++ +S S +YN++I G D A+E R M E P+ V++++
Sbjct: 578 QNLIKE-------KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTS 630
Query: 237 VISGFRRIRELRKAFELKLEMDQKET--------------CWPLDQDTNESLVKDL---- 278
+I+GF + + A E+ EM E C D T +L +L
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG 690
Query: 279 --SNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVS-----YCLLLNGLHKKATSRF 331
N ++SL++ + K + A+ L Y+ + + D +S Y +++GL K
Sbjct: 691 LMPNVSVYNSLISGFRNLGKMDAAIDL-YK-KMVNDGISCDLFTYTTMIDGLLKDGNINL 748
Query: 332 ATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTM 391
A+ L+ + +P I++ + LV G +G +A++ + M
Sbjct: 749 ASD--LYSELLDLGIVPDEILHMV---------------LVNGLSKKGQFLKASKMLEEM 791
Query: 392 LHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
++ P +Y+ +I H GN+++A+ ++ EML G V
Sbjct: 792 KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 191/448 (42%), Gaps = 56/448 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V ++ ++ C KN + + +E Y +M ++P+ MI+
Sbjct: 378 PDKVMFSVMVEWFC---KNMEME----KAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E A+ I E ++ H ++I FCK ++ A M KGI P+V Y
Sbjct: 431 PEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN 489
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ C + + AR +F EML +G+ P TY L++ + + + + +++
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM---- 545
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM-PEMLLDPDEVSYSAVISGFR 242
++F + V YN +I+GLC + +A E+L+ + E SY+++I GF
Sbjct: 546 ----NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
++ + A E EM + N TF+SL+N +C ++ ++AL+
Sbjct: 602 KVGDTDSAVETYREMSENGKS---------------PNVVTFTSLINGFCKSNRMDLALE 646
Query: 303 LRYQAQYLP---DSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
+ ++ + + D +Y L++G KK + T LF + +P+ +Y+
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKK--NDMKTAYTLFSELPELGLMPNVSVYN----- 699
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
L+ GFR G ++ A M++ + Y +I GN++ A
Sbjct: 700 ----------SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 420 YDMYKEMLHYGFV----CHMFSVLALIK 443
D+Y E+L G V HM V L K
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSK 777
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/506 (21%), Positives = 204/506 (40%), Gaps = 83/506 (16%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSP-NETTYRCMIRLFCD 60
+PD + ++ + AAC+ V ++L +M + P ++ TY +I F
Sbjct: 270 AEPDGLLFSLAVQAACKTPD-------LVMALDLLREMRGKLGVPASQETYTSVIVAFVK 322
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+EEAV ++ M G+ + + +++ +CK E+GKAL++ M ++G+ PD
Sbjct: 323 EGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVM 382
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE--------FSKV 172
+ ++++ C + +A + + M ++P T+++ CLK E F+
Sbjct: 383 FSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESPEAALEIFNDS 441
Query: 173 FHLQDEVIQKGFLPYYV-------------TSF---------SPSLVTYNALIHGLCFFQ 210
F + I GF+ + TSF P++V YN ++ C +
Sbjct: 442 F---ESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK 498
Query: 211 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 270
D A I M E L+P+ +YS +I GF + ++ ++ W +
Sbjct: 499 NMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD-------------EQNAWDVINQM 545
Query: 271 NESLVKDLSNHDTFSSLVNDYC----AEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKK 326
N S + +N +++++N C EM L + +Y SY +++G K
Sbjct: 546 NASNFE--ANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKV 603
Query: 327 ATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVE--------------- 370
+ A + ++ P+ + + LI C +N +E
Sbjct: 604 GDTDSAVE--TYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 371 ----LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
L+ GF + + A + P +VYN LI G + A D+YK+M
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 427 LHYGFVCHMFSVLALIKALYCDERYN 452
++ G C +F+ +I L D N
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNIN 747
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 15/255 (5%)
Query: 6 CVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVE 65
C +YN++I + + VE Y +M SPN T+ +I FC NR++
Sbjct: 590 CTSYNSIIDGFVKVGDTDS-------AVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 66 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 125
A+ + M L +Y +I FCK +M A + E+ + G+ P+V Y LI
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 126 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 185
+ ++ A DL+++M+ G+S TY T+++ G + L E++ G +
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 186 PYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 245
P + + L++GL + +A ++L M + + P+ + YS VI+G R
Sbjct: 763 --------PDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG 814
Query: 246 ELRKAFELKLEMDQK 260
L +AF L EM +K
Sbjct: 815 NLNEAFRLHDEMLEK 829
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 7/181 (3%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D Y LI C K +++ Y L+ ++ L PN + Y +I F + ++
Sbjct: 659 DLPAYGALIDGFC---KKNDMKTAYT----LFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+ A+ + + M G+S +Y+ +I K+ + A ++ E+LD GI PD + +L
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
+ L + + L+A + +EM + ++P Y T++ + +G ++ F L DE+++KG
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Query: 185 L 185
+
Sbjct: 832 V 832
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 176/432 (40%), Gaps = 46/432 (10%)
Query: 43 ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 102
EL+P Y ++ + R++ AV LM ++ + P + ++S ++ + +A
Sbjct: 166 ELTPRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 103 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 162
E+ +M+ G+ D LL++ +R+ EA +F+ ++ RG P G + V+A
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 163 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 222
C + L E+ K +P S TY ++I +EA+ ++ M
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVP-------ASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 223 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD 282
+ ++ +++++G+ + EL KA +L M++ E L D
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE------------EGLAPD---KV 381
Query: 283 TFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFY 339
FS +V +C + E A++ + + + P SV ++ G K + A +
Sbjct: 382 MFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIF--- 438
Query: 340 IVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 399
+ S+I + + K + F +G V+ A M + P
Sbjct: 439 ----NDSFESWIAHGFMCNK-----------IFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 400 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 459
YN ++ HC N+ A ++ EML G + F+ LI + + + + +W +
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN-KDEQNAWDVI 542
Query: 460 NTLRSCNLNDSE 471
N + + N +E
Sbjct: 543 NQMNASNFEANE 554
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 32/286 (11%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D VTYN+L++ C + + + + L M +R++ PN T+ +I +F +
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAA-------RLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EA+ + M + + P +Y+ +I+ C + + +A +M M+ KG PDV Y L
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE---FSKVFHLQDE--- 178
I C +R+ E LF+EM RG+ TY+T+++ Y G ++F D
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPN 380
Query: 179 ---------------VIQKGFLPY---YVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 220
++K + + + + TYN +IHG+C ++A ++ R
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 221 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 266
+ L PD VSY+ +ISGF R R+ K+ L +M Q++ PL
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM-QEDGLLPL 485
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 195/474 (41%), Gaps = 102/474 (21%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P V ++ ++S ++ KN++L ++ L+H M V + + +Y +I C +R
Sbjct: 67 PSIVDFSKVLSKIAKS-KNYDL------VISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
A+ ++ M + G P + S +I+ FC+ + A+++ +M + G PDV Y
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I C + +A +LF M G+ TY++LV C G +S L +++ +
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 184 FLPYYVT------------SFS---------------PSLVTYNALIHGLCFFQRPDEAL 216
+P +T FS P + TYN+LI+GLC R DEA
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 276
++L M PD V+Y+ +I+GF + + + + +L EM Q+ LV
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR------------GLVG 347
Query: 277 DLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL 336
D T+++++ Y + + A ++ + P+ +Y +LL GL R L+
Sbjct: 348 DTI---TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC--MNWRVEKALV 402
Query: 337 LFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNY 396
LF N KS +EL
Sbjct: 403 LF-----------------------ENMQKSEIEL------------------------- 414
Query: 397 RPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDER 450
+ YN++I C GNV A+D+++ + G + S +I +C +R
Sbjct: 415 --DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG-FCRKR 465
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 147/326 (45%), Gaps = 36/326 (11%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VT ++LI+ C+ + + ++L +M P+ Y +I C
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDA-------IDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
V +AV + M G+ A +Y+ +++ C + A + +M+ + I P+V +
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+I + + + EA L++EM R + P TY++L+ C+ G + + D ++ K
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G L P +VTYN LI+G C +R DE ++ R M + L D ++Y+ +I G+
Sbjct: 309 GCL--------PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
+ A E+ MD + N T+S L+ C + E AL
Sbjct: 361 QAGRPDAAQEIFSRMDSR------------------PNIRTYSILLYGLCMNWRVEKALV 402
Query: 303 L---RYQAQYLPDSVSYCLLLNGLHK 325
L +++ D +Y ++++G+ K
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCK 428
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 18/228 (7%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
DPD TYN+LI+ C + ++ M + P+ TY +I FC
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAK-------QMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
RV+E + R MA++GL +Y+ II + + A E+ M + P++ Y
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTY 384
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+L+ LC R+ +A LF+ M + TY+ ++ C G + L +
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 229
KG P +V+Y +I G C ++ D++ + R M E L P
Sbjct: 445 KG--------LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 15/216 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +YN L+ A C N +LSI Y +L+ +M R++ P+ +Y+ +I+ FC + +
Sbjct: 188 PNTRSYNLLMQAFC---LNDDLSIAY----QLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V A+ +L M KG P SY+ +++ C+ ++ +A ++ M KG PD+ Y
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I C + R ++AR + +ML G SP +Y TL+ C +G F + +E+I KG
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 219
F P++ S N L+ G C F + +EA +++
Sbjct: 361 FSPHFSVS--------NCLVKGFCSFGKVEEACDVV 388
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 12/253 (4%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
+ EL+ + + PN +Y +++ FC + + A + M E+ + P DSY +I
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
FC+ ++ A+E+ +ML+KG PD +Y L+ LC + +L EA L M L+G +
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 151 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 210
P Y+T++ +C + + D+++ G SP+ V+Y LI GLC
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNG--------CSPNSVSYRTLIGGLCDQG 344
Query: 211 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE-LKLEMDQKETCWPLDQD 269
DE + L M P + ++ GF ++ +A + +++ M ET L D
Sbjct: 345 MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET---LHSD 401
Query: 270 TNESLVKDLSNHD 282
T E ++ + N D
Sbjct: 402 TWEMVIPLICNED 414
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 31 RIVELYHQMCVRELSPN-ETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 89
+++ +++M +P + R + L R +++A + + G+ P+ SY+ +
Sbjct: 137 KVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLL 196
Query: 90 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 149
+ FC N ++ A ++ +ML++ + PDV +Y +LIQ C + ++ A +L +ML +G
Sbjct: 197 MQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF 256
Query: 150 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 209
P +Y TL+ + C K + + + L + KG +P LV YN +I G C
Sbjct: 257 VPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG--------CNPDLVHYNTMILGFCRE 308
Query: 210 QRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
R +A ++L M P+ VSY +I G
Sbjct: 309 DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVREL---SPNETTYRCMIRLFCD 60
PD ++Y TL+++ C ++ E Y +C +L +P+ Y MI FC
Sbjct: 258 PDRLSYTTLLNSLCRK----------TQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCR 307
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+R +A +L M G SP++ SY +I C + + EM+ KG P
Sbjct: 308 EDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSV 367
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV-FHLQDEV 179
L++ C ++ EA D+ + ++ G + T++ ++ C + E K+ L+D V
Sbjct: 368 SNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 427
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD V YNT+I C ++ + ++ M SPN +YR +I CD+
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDAR-------KVLDDMLSNGCSPNSVSYRTLIGGLCDQG 344
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+E L M KG SPH + ++ FC ++ +A ++ ++ G +
Sbjct: 345 MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWE 404
Query: 123 LLIQLLCHQ 131
++I L+C++
Sbjct: 405 MVIPLICNE 413
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 195/496 (39%), Gaps = 87/496 (17%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VTYNT++ A + + +L EL M L PN TY ++ +C
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDLK-------ELLLDMKKNGLVPNRVTYNNLVYGYCKLG 289
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++EA I+ LM + + P +Y+ +I+ C M + LE+ M + PDV Y
Sbjct: 290 SLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 123 LLIQLLCHQRRLLEARDLFQEML------------------------------------L 146
LI LEAR L ++M +
Sbjct: 350 TLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDM 409
Query: 147 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 206
G SP TY TL++AY G+ S + E+ QKG + +T N ++ L
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI--------KMNTITLNTILDAL 461
Query: 207 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 266
C ++ DEA +L + DEV+Y +I GF R ++ KA E+ EM +
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK------- 514
Query: 267 DQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGL 323
VK TF+SL+ C K E+A++ ++ LPD ++ ++ G
Sbjct: 515 --------VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 324 HKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNE 383
K+ A + Y+ I+ + + L+ G G+ +
Sbjct: 567 CKEGRVEKA-----------------FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609
Query: 384 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 443
A +T++ + YN +I C + +AYD+ EM G F+ + I
Sbjct: 610 ALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Query: 444 ALYCDERYNEMSWVIR 459
L D + +E +++
Sbjct: 669 LLMEDGKLSETDELLK 684
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 190/459 (41%), Gaps = 51/459 (11%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
T+N L++ C K + R+V + +++P+ TY +++ + R+ +
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEF------KVNPDNVTYNTILKAMSKKGRLSDL 259
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
+L M + GL P+ +Y+ ++ +CK + +A ++ M + PD+ Y +LI
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILING 319
Query: 128 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 187
LC+ + E +L M + P TY+TL++ G + L +++ G
Sbjct: 320 LCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG---- 375
Query: 188 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM-LLDPDEVSYSAVISGFRRIRE 246
+ VT+N + LC ++ + ++ + +M PD V+Y +I + ++ +
Sbjct: 376 ----VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 247 LRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKL 303
L A E+ EM QK N T +++++ C E D+A L
Sbjct: 432 LSGALEMMREMGQKGIKM---------------NTITLNTILDALCKERKLDEAHNLLNS 476
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANN 363
++ ++ D V+Y L+ G ++ + L ++ + P+ ++
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFRE--EKVEKALEMWDEMKKVKITPTVSTFN--------- 525
Query: 364 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
L+ G G A D + P+ + +N +I +C G V KA++ Y
Sbjct: 526 ------SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFY 579
Query: 424 KEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTL 462
E + + F ++ L+ L C E E + NTL
Sbjct: 580 NESIKHSFKPDNYTCNILLNGL-CKEGMTEKALNFFNTL 617
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 147/325 (45%), Gaps = 58/325 (17%)
Query: 137 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF--SP 194
AR++F +M+ G+S +T++ LV YCL+G+ L+D + G L V+ F +P
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK------LEDAL---GMLERMVSEFKVNP 238
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
VTYN ++ + R + E+L M + L P+ V+Y+ ++ G+ ++ L++AF++
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI- 297
Query: 255 LEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---P 311
+E+ ++ P DL T++ L+N C L+L + L P
Sbjct: 298 VELMKQTNVLP-----------DLC---TYNILINGLCNAGSMREGLELMDAMKSLKLQP 343
Query: 312 DSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVEL 371
D V+Y L++G + S A +L+ E+ N+ K+ ++
Sbjct: 344 DVVTYNTLIDGCFELGLSLEARKLM---------------------EQMENDGVKA-NQV 381
Query: 372 VKGFRMRGLVNEAAR------ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 425
++ L E R ++ + + P+ Y+ LI + G++ A +M +E
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 426 MLHYGFVCHMFSVLALIKALYCDER 450
M G + ++ ++ AL C ER
Sbjct: 442 MGQKGIKMNTITLNTILDAL-CKER 465
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+N++I C+ + + E Y++ P+ T ++ C
Sbjct: 554 PDDSTFNSIILGYCKEGRVE-------KAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E+A+ + E+ +Y+ +IS FCK+K++ +A ++ EM +KG+ PD Y
Sbjct: 607 TEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665
Query: 124 LIQLLCHQRRLLEARDLFQE 143
I LL +L E +L ++
Sbjct: 666 FISLLMEDGKLSETDELLKK 685
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 31/286 (10%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
R EL+ +M E RC+IR CD V E +L+ ++GL P Y+++I
Sbjct: 198 RFWELHKEMVESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLI 255
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
S FC+ E+ M+ FP ++ Y +I+ LC ++ LEA +F+ + +G +
Sbjct: 256 SGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYA 315
Query: 151 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP----YYV----------------- 189
P Y T++ +C KG L E+I+KG P Y V
Sbjct: 316 PDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAF 375
Query: 190 ------TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ ++++ N +I G C + DEA EI + M E + P+ ++Y+A+I GF +
Sbjct: 376 YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCK 435
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN 289
++ K LKL + K +LV++L D+ ++ +N
Sbjct: 436 ENKVEKG--LKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLN 479
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 23/244 (9%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
DP Y LIS CE Y + E+ H M P+ Y+ +I+ C
Sbjct: 245 DPGQYVYAKLISGFCEIGN-------YACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNK 297
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ EA I + + +KG +P Y+ +I FC+ +G A ++ EM+ KG+ P+ AY
Sbjct: 298 KQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYN 357
Query: 123 LLIQLLCHQRR----LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 178
++I H +R L+EA + EML G + +T+++ +C G+ + F +
Sbjct: 358 VMIH--GHFKRGEISLVEA--FYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
Query: 179 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
+ + G +P+ +TYNALI G C + ++ L++ + + + L P ++Y+A++
Sbjct: 414 MSETGV--------TPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Query: 239 SGFR 242
+
Sbjct: 466 RNLK 469
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
P T ++ + VEEA+ + ++ + G+S + + ++ K +++ +
Sbjct: 141 FKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFW 200
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
E+ EM++ D LI+ LC + E +L ++ L +G+ PG Y L+ +
Sbjct: 201 ELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGF 258
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
C G ++ + + +I PS+ Y +I GLC ++ EA I + +
Sbjct: 259 CEIGNYACMSEVLHTMIAWNHF--------PSMYIYQKIIKGLCMNKKQLEAYCIFKNLK 310
Query: 224 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
+ PD V Y+ +I GF L A +L EM +K
Sbjct: 311 DKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK 347
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 107/268 (39%), Gaps = 36/268 (13%)
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
+EA+E+ + +M + V+ ++V+ G + R+L + +EL EM + E D +
Sbjct: 162 EEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESE----FDSERIR 217
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
L++ L + S + LK + P Y L++G +
Sbjct: 218 CLIRALCDGGDVS----------EGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACM 267
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEK-CANNE-------FKSV------------VELV 372
+ +L I + PS IY +I+ C N + FK++ ++
Sbjct: 268 SEVLHTMIAWN--HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMI 325
Query: 373 KGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
+GF +G + A + M+ + RP YN++I H G + Y EML G+
Sbjct: 326 RGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYG 385
Query: 433 CHMFSVLALIKALYCDERYNEMSWVIRN 460
M S +IK + +E + +N
Sbjct: 386 GTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 7 VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEE 66
V YN LIS C+A + L M P+ TY ++ + D N ++
Sbjct: 221 VVYNALISGFCKAGRIEKAE-------ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKR 273
Query: 67 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 126
A G++ M G+ A SY++++ R C+ K V+ ++ F DV +Y LI+
Sbjct: 274 AEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIE 333
Query: 127 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
C +A LF+EM +GM TY +L++A+ +G S L D++ + G P
Sbjct: 334 TFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP 393
Query: 187 ---YYVT------------------------SFSPSLVTYNALIHGLCFFQRPDEALEIL 219
+Y T +P ++YN+LI GLC R EA+++
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Query: 220 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 276
M PDE+++ +I G R ++L A+++ +M K + LD+D +++L+K
Sbjct: 454 EDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG--FTLDRDVSDTLIK 508
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 175/468 (37%), Gaps = 70/468 (14%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
TY+ IS C+ +K + I L M P+ + + L C N+V A
Sbjct: 81 TYSRFISGLCKVKK-------FDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFA 133
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
V M ++G P SY+ +I+ + ++ A+E+ M+ G+ PD A L+
Sbjct: 134 VQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVG 193
Query: 128 LCHQRRLLEARDLFQEMLLRG-MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
LCH R++ A ++ E + + Y+ L+ +C G K L+ + + G P
Sbjct: 194 LCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEP 253
Query: 187 YYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEALEIL 219
VT +YN L+ C PD+ +
Sbjct: 254 DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM 313
Query: 220 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS 279
E D VSYS +I F R RKA+ L EM QK +
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGM---------------VM 358
Query: 280 NHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLL 336
N T++SL+ + E + +A KL Q L PD + Y +L+ L K
Sbjct: 359 NVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN-------- 410
Query: 337 LFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNY 396
+Y +++ +IE + S L+ G G V EA + + M +
Sbjct: 411 ---------VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 397 RPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 444
P+ + +I G + AY ++ +M+ GF LIKA
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 169/424 (39%), Gaps = 43/424 (10%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
Y I + +R E A I M G S +YSR IS CK K+ + +M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
G PD+ A+ + + LLC + ++ A F M+ RG P +Y L+ G+ +
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL-RGMPEMLLDP 229
+ + +I+ G SP AL+ GLC ++ D A E++ + +
Sbjct: 167 DAVEIWNAMIRSG--------VSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKL 218
Query: 230 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN 289
V Y+A+ISGF + + KA LK M K C P DL ++ +
Sbjct: 219 STVVYNALISGFCKAGRIEKAEALKSYM-SKIGCEP-----------DLVTYNVLLNYYY 266
Query: 290 DYCAEDKAEMALKLRYQAQYLPDSVSYCLLL-------------NGLHKKATSR------ 330
D +AE + ++ D+ SY LL N + K+ R
Sbjct: 267 DNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVV 326
Query: 331 -FATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARD 389
++T + F ++ T +Y +++ + +K + L+K F G + A + D
Sbjct: 327 SYSTLIETFCRASN--TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 390 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDE 449
M P+ Y ++ C GNV KAY ++ +M+ + S +LI L
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 450 RYNE 453
R E
Sbjct: 445 RVTE 448
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 7/180 (3%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D V+Y+TLI C A + L+ +M + + N TY +I+ F
Sbjct: 324 DVVSYSTLIETFCRASNTR-------KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNS 376
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
A +L M E GLSP Y+ I+ CK+ + KA + +M++ I PD +Y L
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I LC R+ EA LF++M + P T+ ++ + S + + D+++ KGF
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
+ VTY +LI A E N +++ +L QM LSP+ Y ++ C V
Sbjct: 359 NVVTYTSLIKAFLR-EGNSSVA------KKLLDQMTELGLSPDRIFYTTILDHLCKSGNV 411
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
++A G+ M E ++P A SY+ +IS C++ + +A+++ +M K PD + +
Sbjct: 412 DKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
I L ++L A ++ +M+ +G + DTL++A C
Sbjct: 472 IGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 161/410 (39%), Gaps = 48/410 (11%)
Query: 42 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK--EM 99
+ L YR I ++ AV + M + Y+R I + E+
Sbjct: 3 QTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFEL 62
Query: 100 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 159
+A+ ++ + + P Y I LC ++ L +M G P ++
Sbjct: 63 AEAIYWDMKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVY 120
Query: 160 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 219
++ C + + ++Q+G P +V+Y LI+GL + +A+EI
Sbjct: 121 LDLLCRENKVGFAVQTFFCMVQRG--------REPDVVSYTILINGLFRAGKVTDAVEIW 172
Query: 220 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS 279
M + PD + +A++ G R++ A+E+ E + + VK LS
Sbjct: 173 NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAE------------EIKSARVK-LS 219
Query: 280 NHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLL 336
+++L++ +C + E A L+ + PD V+Y +LLN + + A ++
Sbjct: 220 TV-VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278
Query: 337 LFYIVAHCLTIPSYIIYDILIEKC-ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRN 395
+V + + +Y +L C ++ K +VK RG + +
Sbjct: 279 A-EMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVS---------- 327
Query: 396 YRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
Y+ LI C N KAY +++EM G V ++ + +LIKA
Sbjct: 328 -------YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 173/403 (42%), Gaps = 45/403 (11%)
Query: 52 RCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 111
RCM+R F + R+ EAVG++ M +GL+P + + + ++ + + A + EM
Sbjct: 151 RCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSV 210
Query: 112 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 171
+G+ PD +Y L++ ++ EA M+ RG P T ++ A C G ++
Sbjct: 211 RGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNR 270
Query: 172 VFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 231
++I G F P+L+ + +LI GLC +A E+L M P+
Sbjct: 271 AIWYFRKMIDLG--------FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
Query: 232 VSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDY 291
+++A+I G + KAF L L++ + +T P N T++S++ Y
Sbjct: 323 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP--------------NVHTYTSMIGGY 368
Query: 292 CAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIP 348
C EDK AEM + P+ +Y L+NG H KA S F L ++ +P
Sbjct: 369 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING-HCKAGS-FGRAYELMNLMGDEGFMP 426
Query: 349 SYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 407
+ Y+ I+ C + EL+ GL +G Y +LI
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL----------------EADGVTYTILI 470
Query: 408 FDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDER 450
+ C ++++A + M GF M LI A +C ++
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA-FCRQK 512
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 148/358 (41%), Gaps = 71/358 (19%)
Query: 39 MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 98
M R P+ T ++ C+ V A+ R M + G P+ +++ +I CK
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 99 MGKALEMKVEMLDKG--------------------------IF----------PDVHAYG 122
+ +A EM EM+ G +F P+VH Y
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+I C + +L A LF M +G+ P TY TL+ +C G F + + L + + +
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
GF+ P++ TYNA I LC R EA E+L L+ D V+Y+ +I
Sbjct: 423 GFM--------PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD----------------------LSN 280
+ ++ +A M++ T + D N L+ +
Sbjct: 475 KQNDINQALAFFCRMNK--TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 281 HDTFSSLVNDYCAEDKAEMALKLRYQAQY---LPDSVSYCLLLNGLHKKATSRFATRL 335
+T++S+++ YC E ++ALK + + +PDS +Y L++GL KK+ A +L
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL 590
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 187/437 (42%), Gaps = 49/437 (11%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
V + M + L+P+ T C++ + + +E A + M+ +G+ P + SY ++
Sbjct: 167 VGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIG 226
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
++ ++ +A M+ +G PD L++ LC + A F++M+ G P
Sbjct: 227 CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPN 286
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
+ +L++ C KG + F + +E+++ G + P++ T+ ALI GLC
Sbjct: 287 LINFTSLIDGLCKKGSIKQAFEMLEEMVRNG--------WKPNVYTHTALIDGLCKRGWT 338
Query: 213 DEALEI-LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 271
++A + L+ + P+ +Y+++I G+ + +L +A E+ +++ +P
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA-EMLFSRMKEQGLFP------ 391
Query: 272 ESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKAT 328
N +T+++L+N +C +A + L ++P+ +Y ++ L KK+
Sbjct: 392 --------NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 329 SRFATRLLLFYIVAHCLTIPSYIIYDILI-EKCANNEFKSVVE----------------- 370
+ A LL C + Y ILI E+C N+ +
Sbjct: 444 APEAYELL--NKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 501
Query: 371 --LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLH 428
L+ F + + E+ R ++ P Y +I +C G++ A + M
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 429 YGFVCHMFSVLALIKAL 445
+G V F+ +LI L
Sbjct: 562 HGCVPDSFTYGSLISGL 578
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 26/292 (8%)
Query: 4 PDCVTYNTLISAACE---AEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
P+ T+ LI C+ EK L + VR + Y PN TY MI +C
Sbjct: 320 PNVYTHTALIDGLCKRGWTEKAFRLFLKLVR-SDTYK--------PNVHTYTSMIGGYCK 370
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+++ A + M E+GL P+ ++Y+ +I+ CK G+A E+ M D+G P+++
Sbjct: 371 EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYT 430
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y I LC + R EA +L + G+ G TY L++ C + + ++
Sbjct: 431 YNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAF----- 485
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
F T F + N LI C ++ E+ + + + + L P + +Y+++IS
Sbjct: 486 ---FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 542
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 292
+ + ++ A + M ++ C P D T SL+ L S+V++ C
Sbjct: 543 YCKEGDIDLALKYFHNM-KRHGCVP-DSFTYGSLISGLCKK----SMVDEAC 588
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P TY ++IS C+ E + +L++ Y +H M P+ TY +I C ++
Sbjct: 531 PTKETYTSMISCYCK-EGDIDLALKY------FHNMKRHGCVPDSFTYGSLISGLCKKSM 583
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V+EA + M ++GLSP + + +CK + A+ + +E LDK ++ +
Sbjct: 584 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL-LEPLDKKLW--IRTVRT 640
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
L++ LC ++++ A FQ++L + S T A G+ + V L + +
Sbjct: 641 LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERI 696
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 180/429 (41%), Gaps = 44/429 (10%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+E++ +M + + ++ C R VE++ +++ + KG+ P A +Y+ II+
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
+ K ++ + M G+ + Y LL++L ++ +A LF EM RG+
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
Y +L+ C KG + F L DE+ +KG SPS TY ALI G+C
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKG--------LSPSSYTYGALIDGVCKVGEM 380
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
A ++ M ++ +V ++ +I G+ R + +A + M+QK
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK------------ 428
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
D+ +T +S N D+A+ L + +VSY L++ K+ A
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 392
R LF ++ P+ I Y+++I + +G + EA + R M
Sbjct: 489 KR--LFVEMSSKGVQPNAITYNVMI---------------YAYCKQGKIKEARKLRANME 531
Query: 393 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF----VCHMFSVLALIKALYCD 448
P+ Y LI CI NV +A ++ EM G V + + L KA D
Sbjct: 532 ANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSD 591
Query: 449 ER---YNEM 454
E Y+EM
Sbjct: 592 EAFGLYDEM 600
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 177/420 (42%), Gaps = 45/420 (10%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
+L + V+ + P TY +I + + G+L++M + G+ + +Y+ ++
Sbjct: 245 KLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELS 304
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
KN +M A ++ EM ++GI DVH Y LI C + + A LF E+ +G+SP
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
TY L++ C GE L +E+ KG + + V +N LI G C D
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKG--------VNITQVVFNTLIDGYCRKGMVD 416
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 273
EA I M + D + + + S F R++ +A + M ++ S
Sbjct: 417 EASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM--------MEGGVKLS 468
Query: 274 LVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSR 330
V ++++L++ YC E E A +L + P++++Y +++ K+ +
Sbjct: 469 TV-------SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 331 FATRLLLFYIVAHCLTIPSYIIYDILIEKC-ANNEFKSVVELVKGFRMRGLVNEAARARD 389
A R L + A+ + SY ++ +C A+N V+EA R
Sbjct: 522 EA-RKLRANMEANGMDPDSYTYTSLIHGECIADN-----------------VDEAMRLFS 563
Query: 390 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDE 449
M + Y ++I G +A+ +Y EM G+ ALI +++ E
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHSPE 623
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 33/322 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ TYNT+I+A + + + + M + N+ TY ++ L +
Sbjct: 257 PEAYTYNTIINAYVKQR-------DFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGK 309
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ +A + M E+G+ Y+ +IS C+ M +A + E+ +KG+ P + YG
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGA 369
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI +C + A L EM +G++ ++TL++ YC KG + + D + QKG
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
F + T N + +R DEA + L M E + VSY+ +I + +
Sbjct: 430 --------FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCK 481
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ +A L +EM K P N T++ ++ YC + K + A KL
Sbjct: 482 EGNVEEAKRLFVEMSSK-GVQP--------------NAITYNVMIYAYCKQGKIKEARKL 526
Query: 304 RYQAQYL---PDSVSYCLLLNG 322
R + PDS +Y L++G
Sbjct: 527 RANMEANGMDPDSYTYTSLIHG 548
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 16/266 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVE---LYHQMCVRELSPNETTYRCMIRLFC 59
DPD TY TLIS C + RI E L+ +M ++ +P TY +I C
Sbjct: 189 DPDSYTYGTLISGLCR----------FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
V+EA+ L M KG+ P+ +YS ++ CK+ +A+E+ M+ +G P++
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
Y LI LC ++++ EA +L M L+G+ P Y ++ +C +F + + DE+
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
I G P +T ++ + T N ++ GLC P A + M + + + +++
Sbjct: 359 ILGGITPNRLT-WNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVK 416
Query: 240 GFRRIRELRKAFELKLEMDQKETCWP 265
+ E +KA +L E+ + C P
Sbjct: 417 CLCKKGEFQKAVQLVDEI-VTDGCIP 441
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 134/311 (43%), Gaps = 29/311 (9%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P + N LI A C + + + +++ +M R P+ TY +I C R
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGL------KIFLEMPKRGCDPDSYTYGTLISGLCRFGR 207
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++EA + M EK +P +Y+ +I+ C +K + +A+ EM KGI P+V Y
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ LC R L+A +LF+ M+ RG P TY TL+ C + + + L D + +G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA-VISGFR 242
P Y +I G C + EA L M + P+ ++++ V +
Sbjct: 328 --------LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNE 379
Query: 243 RIREL-----RKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS-------LVND 290
+R L +AF L L M + ++ +T ESLVK L F +V D
Sbjct: 380 VVRGLCANYPSRAFTLYLSMRSRGI--SVEVETLESLVKCLCKKGEFQKAVQLVDEIVTD 437
Query: 291 YCAEDKAEMAL 301
C K L
Sbjct: 438 GCIPSKGTWKL 448
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 124/305 (40%), Gaps = 46/305 (15%)
Query: 133 RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF 192
R ++ +F +M P + Y T++ + + + F + + G LP
Sbjct: 101 RPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG-LP------ 153
Query: 193 SPSLVTYNALIHGLCFFQRP-DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 251
P++ + N LI LC D L+I MP+ DPD +Y +ISG R + +A
Sbjct: 154 -PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212
Query: 252 ELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL- 310
+L EM +K+ C P ++V T++SL+N C + A++ + +
Sbjct: 213 KLFTEMVEKD-CAP-------TVV-------TYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 311 --PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKS 367
P+ +Y L++GL K S A L + C P+ + Y LI C + +
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR--PNMVTYTTLITGLCKEQKIQE 315
Query: 368 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 427
VEL+ ++GL +P+ +Y +I C +A + EM+
Sbjct: 316 AVELLDRMNLQGL----------------KPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 428 HYGFV 432
G
Sbjct: 360 LGGIT 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTY TLI+ C+ +K VEL +M ++ L P+ Y +I FC ++
Sbjct: 295 PNMVTYTTLITGLCKEQKIQ-------EAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 64 VEEAVGILRLMAEKGLSP-------HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 116
EA L M G++P H + + ++ C N +A + + M +GI
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISV 406
Query: 117 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 160
+V L++ LC + +A L E++ G P T+ L+
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 190/444 (42%), Gaps = 63/444 (14%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
+Y +M + +SPN TY +I+ C R+ EA G+ + ++G+ P +YS +I FC
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K + + +M+ G PDV YG+L+ L Q +L A +ML + +
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 155 TYDTLVEAYCLKGEFS---KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 211
+++L++ +C F KVF L + P + T+ ++ R
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMG-----------IYGIKPDVATFTTVMRVSIMEGR 546
Query: 212 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL-EMDQKE--------- 261
+EAL + M +M L+PD ++Y +I F + ++ L+L ++ Q+
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAF--CKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 262 --------TCWPLDQDTN--ESLVKDLSNHD--TFSSLVNDYCA---EDKAEMALKLRYQ 306
C ++ + +L++ D T+++++ YC+ D+AE +L
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 307 AQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI--------- 357
+ P++V+ +L++ L K A R +F I+A + P+ + Y L+
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIR--MFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 722
Query: 358 -----------EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLL 406
EK + S ++ G RG V+EA + P+ Y +L
Sbjct: 723 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 782
Query: 407 IFDHCIGGNVHKAYDMYKEMLHYG 430
I +C G + +A +Y+ ML G
Sbjct: 783 IRGYCKVGRLVEAALLYEHMLRNG 806
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 149/324 (45%), Gaps = 39/324 (12%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
+ V +N+LI C + + ++++ M + + P+ T+ ++R+ R+
Sbjct: 495 NVVVFNSLIDGWCRLNR-------FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EEA+ + M + GL P A +Y +I FCK+ + L++ M I D+ ++
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC-LK--GEFSKVFHLQDEVIQ 181
I LL R+ +A F ++ M P TY+T++ YC L+ E ++F L
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK---- 663
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
VT F P+ VT LIH LC D A+ + M E P+ V+Y ++ F
Sbjct: 664 -------VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
+ ++ +F+L EM +K + S+V ++S +++ C + + A
Sbjct: 717 SKSVDIEGSFKLFEEMQEK--------GISPSIV-------SYSIIIDGLCKRGRVDEAT 761
Query: 302 KLRYQ---AQYLPDSVSYCLLLNG 322
+ +Q A+ LPD V+Y +L+ G
Sbjct: 762 NIFHQAIDAKLLPDVVAYAILIRG 785
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 28/317 (8%)
Query: 45 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
+PN T+ +I FC R ++ A + ++M ++G+ P +YS +I + K +G +
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 105 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
+ + L KG+ DV + I + L A +++ ML +G+SP TY L++ C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 165 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
G + F + +++++G PS+VTY++LI G C + M +
Sbjct: 403 QDGRIYEAFGMYGQILKRG--------MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 225 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTF 284
M PD V Y ++ G + + A ++M L Q ++V F
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM--------LGQSIRLNVV-------VF 499
Query: 285 SSLVNDYCAEDKAEMALKL-RYQAQY--LPDSVSYCLLLNGLHKKATSRFATRLLLFYIV 341
+SL++ +C ++ + ALK+ R Y PD ++ ++ R L LF+ +
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR--VSIMEGRLEEALFLFFRM 557
Query: 342 AHCLTIPSYIIYDILIE 358
P + Y LI+
Sbjct: 558 FKMGLEPDALAYCTLID 574
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 7/184 (3%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VTYNT+I C + RI EL V PN T +I + C N
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAE----RIFELLK---VTPFGPNTVTLTILIHVLCKNN 685
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ A+ + +MAEKG P+A +Y ++ F K+ ++ + ++ EM +KGI P + +Y
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++I LC + R+ EA ++F + + + P Y L+ YC G + L + +++
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Query: 183 GFLP 186
G P
Sbjct: 806 GVKP 809
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD + Y TLI A C+ K P + + +L+ M ++S + +I L +
Sbjct: 563 EPDALAYCTLIDAFCKHMK------PTIGL-QLFDLMQRNKISADIAVCNVVIHLLFKCH 615
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF-PDVHAY 121
R+E+A + E + P +Y+ +I +C + + +A E E+L F P+
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA-ERIFELLKVTPFGPNTVTL 674
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+LI +LC + A +F M +G P TY L++ + + F L +E+ +
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
KG SPS+V+Y+ +I GLC R DEA I + L PD V+Y+ +I G+
Sbjct: 735 KGI--------SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 242 RRIRELRKA 250
++ L +A
Sbjct: 787 CKVGRLVEA 795
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 145/346 (41%), Gaps = 53/346 (15%)
Query: 94 CKNKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
C+ + KALE+ V G+ P Y +L L+ R L A D F ++ G+ P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA-DHFDKLCRGGIEPS 215
Query: 153 G-RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 211
G + +++A KGE +K V+++G F +V+ N ++ GL Q
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERG--------FRVGIVSCNKVLKGLSVDQ- 266
Query: 212 PDEALEILRGMPEMLLD----PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 267
+E+ + ++LD P+ V++ +I+GF + E+ +AF+L M+Q+
Sbjct: 267 ----IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR------- 315
Query: 268 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK-- 325
+ DL +S+L++ Y M KL QA LHK
Sbjct: 316 -----GIEPDLI---AYSTLIDGYFKAGMLGMGHKLFSQA---------------LHKGV 352
Query: 326 KATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 385
K + + Y+ + L S + +L + + N + L+KG G + EA
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI-LIKGLCQDGRIYEAF 411
Query: 386 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
+L R P Y+ LI C GN+ + +Y++M+ G+
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 192/467 (41%), Gaps = 53/467 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +T+ +LI + + + ++Y +M + N Y +I+ F + R
Sbjct: 445 PDEITFCSLIDGLGKVGRVDD-------AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E+ I + M + SP + + K E K M E+ + PD +Y +
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI L E +LF M +G R Y+ +++ +C G+ +K + L +E+ KG
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
F P++VTY ++I GL R DEA + ++ + V YS++I GF +
Sbjct: 618 --------FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ + +A+ + E+ QK L +L T++SL++ ++ AL
Sbjct: 670 VGRIDEAYLILEELMQK------------GLTPNLY---TWNSLLDALVKAEEINEALVC 714
Query: 304 RYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
+ L P+ V+Y +L+NGL K +F + + + PS I Y +I
Sbjct: 715 FQSMKELKCTPNQVTYGILINGLCK--VRKFNKAFVFWQEMQKQGMKPSTISYTTMIS-- 770
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 420
G G + EA D P+ A YN +I G A+
Sbjct: 771 -------------GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Query: 421 DMYKEMLHYGFVCHMFSVLALIKALY---CDERYNEMSWVIRNTLRS 464
+++E G H + + L+ L+ C E+ + V+R T ++
Sbjct: 818 SLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKA 864
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 189/455 (41%), Gaps = 55/455 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P Y TLI A NH+ ++ L+ QM P + +IR F R
Sbjct: 166 PAFSAYTTLIGAFSAV--NHS-----DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V+ A+ +L M L Y+ I F K ++ A + E+ G+ PD Y
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I +LC RL EA ++F+ + P Y+T++ Y G+F + + L + KG
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ PS++ YN ++ L + DEAL++ M + P+ +Y+ +I R
Sbjct: 339 SI--------PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCR 389
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+L AFEL+ M QK +P N T + +V+ C K + A +
Sbjct: 390 AGKLDTAFELRDSM-QKAGLFP--------------NVRTVNIMVDRLCKSQKLDEACAM 434
Query: 304 RYQAQY---LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
+ Y PD +++C L++GL K A ++ + + C T + I+Y
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT--NSIVY------- 485
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 420
L+K F G + + M+++N P+ + N + G K
Sbjct: 486 --------TSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 421 DMYKEMLHYGFV--CHMFSVL--ALIKALYCDERY 451
M++E+ FV +S+L LIKA + +E Y
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 20/226 (8%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P VTY ++I + ++ L Y+ L+ + + + N Y +I F
Sbjct: 619 EPTVVTYGSVIDGLAKIDR---LDEAYM----LFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R++EA IL + +KGL+P+ +++ ++ K +E+ +AL M + P+ YG
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LI LC R+ +A +QEM +GM P +Y T++ G ++ L D
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL-----RGMP 223
G + P YNA+I GL R +A + RG+P
Sbjct: 792 GGV--------PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP 829
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 161/404 (39%), Gaps = 48/404 (11%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPH-ADSYSRIISRFCKNKEMGKALEMKVEMLDK 112
++R D NR A+ R + PH +SY+ ++ + + ++ EM
Sbjct: 71 VLRRLKDVNR---AIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 113 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
G P V+ ++ +L E D+ Q M P Y TL+ G FS V
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLI------GAFSAV 181
Query: 173 FHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 232
H +++ F + P++ + LI G R D AL +L M LD D V
Sbjct: 182 NH--SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 233 SYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 292
Y+ I F ++ ++ A W + + +K + T++S++ C
Sbjct: 240 LYNVCIDSFGKVGKVDMA-------------WKFFHEIEANGLK--PDEVTYTSMIGVLC 284
Query: 293 AEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPS 349
++ + A+++ + + +P + +Y ++ G + +F L +IPS
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG--SAGKFDEAYSLLERQRAKGSIPS 342
Query: 350 YIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 409
I Y+ ++ C R G V+EA + + M ++ P + YN+LI
Sbjct: 343 VIAYNCIL-TC--------------LRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDM 386
Query: 410 HCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
C G + A+++ M G ++ +V ++ L ++ +E
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 158/360 (43%), Gaps = 42/360 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTY LIS C+ + +L+++M P+ + ++ FC R
Sbjct: 231 PNRVTYTILISGLCQRGSADDAR-------KLFYEMQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ EA +LRL + G YS +I + + +A E+ ML K I PD+ Y +
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LIQ L ++ +A L M +G+SP Y+ +++A C +G + LQ E+ +
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSE-- 401
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
T P T+ LI +C EA EI + + P +++A+I G +
Sbjct: 402 ------TESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455
Query: 244 IRELRKAFEL--KLEMDQKETCW-PLDQDTNESL------------VKDLSNH-DTFSS- 286
EL++A L K+E+ + + + L N S +DL++ DT SS
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSP 515
Query: 287 -------LVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLL 336
L+N +C + ALKL Q PDSV+Y L+NGLH+ A +L
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 187/443 (42%), Gaps = 39/443 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TYN ++ E + ++ +Y++M SPN T+ ++ + R
Sbjct: 160 PDVFTYNVILRVMMREE------VFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+A + M +G+SP+ +Y+ +IS C+ A ++ EM G +PD A+
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ C R++EA +L + G G R Y +L++ +++ F L +++K
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK- 332
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ P ++ Y LI GL + ++AL++L MP + PD Y+AVI
Sbjct: 333 -------NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCG 385
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
L + L+LEM + E+ +P D T+ L+ S+ + + E+ ++
Sbjct: 386 RGLLEEGRSLQLEMSETES-FP-DACTHTILI---------CSMCRNGLVREAEEIFTEI 434
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANN 363
++ P ++ L++GL K + A RLLL H + + + + N
Sbjct: 435 E-KSGCSPSVATFNALIDGLCKSGELKEA-RLLL-----HKMEVGRPASLFLRLSHSGNR 487
Query: 364 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
F ++VE G + +A R P+ YN+LI C G++ A +
Sbjct: 488 SFDTMVE-------SGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Query: 424 KEMLHYGFVCHMFSVLALIKALY 446
+ G + LI L+
Sbjct: 541 NVLQLKGLSPDSVTYNTLINGLH 563
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 156/369 (42%), Gaps = 38/369 (10%)
Query: 78 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR-LLE 136
G+S + + +IS + K KA+E M + PDV Y ++++++ + +
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 137 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 196
A ++ EML SP T+ L++ KG S + D++ +G SP+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG--------ISPNR 233
Query: 197 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 256
VTY LI GLC D+A ++ M PD V+++A++ GF ++ + +AFEL L
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL-LR 292
Query: 257 MDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSY 316
+ +K+ + L SL+ L ++ Y K + PD + Y
Sbjct: 293 LFEKDG-FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK----------PDIILY 341
Query: 317 CLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFR 376
+L+ GL K A +LL ++PS I C N ++K
Sbjct: 342 TILIQGLSKAGKIEDALKLL--------SSMPSKGISPDTY--CYN-------AVIKALC 384
Query: 377 MRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMF 436
RGL+ E + M P+ + +LI C G V +A +++ E+ G +
Sbjct: 385 GRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVA 444
Query: 437 SVLALIKAL 445
+ ALI L
Sbjct: 445 TFNALIDGL 453
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 124/254 (48%), Gaps = 18/254 (7%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE-LSPNETTYRCMIRLFC 59
+ PD T+NTL++ C+ + YV + Y ++ P+ TY I C
Sbjct: 150 LVSPDIYTFNTLVNGYCK--------LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
R V+ A + + M + G + SY+++I + K++ +AL + V+M D P+V
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR 261
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
Y +LI LC + EA +LF++M G+ P Y L++++C + L + +
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
++ G + P+++TYNALI G C + +A+ +L M E L PD ++Y+ +I+
Sbjct: 322 LENGLM--------PNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIA 372
Query: 240 GFRRIRELRKAFEL 253
G L A+ L
Sbjct: 373 GQCSSGNLDSAYRL 386
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 160/392 (40%), Gaps = 60/392 (15%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 106
N T+Y ++ L C + E I LM + S ++ + + FC+ G + E+K
Sbjct: 59 NVTSYASLVTLLCSQEIPYEVPKITILMIK---SCNSVRDALFVVDFCRTMRKGDSFEIK 115
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
++ K Y L+ L + E + L+ EML +SP T++TLV YC
Sbjct: 116 YKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKL 168
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G + +IQ G P Y T Y + I G C + D A ++ + M +
Sbjct: 169 GYVVEAKQYVTWLIQAGCDPDYFT--------YTSFITGHCRRKEVDAAFKVFKEMTQNG 220
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS 286
+EVSY+ +I G +++ +A L ++M + + C P N T++
Sbjct: 221 CHRNEVSYTQLIYGLFEAKKIDEALSLLVKM-KDDNCCP--------------NVRTYTV 265
Query: 287 LVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAH 343
L++ C + A+ L Q + PD Y +L+ T A+ LL H
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL-----EH 320
Query: 344 CLT---IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEG 400
L +P+ I Y+ LI KGF + V++A ML +N P+
Sbjct: 321 MLENGLMPNVITYNALI---------------KGFCKKN-VHKAMGLLSKMLEQNLVPDL 364
Query: 401 AVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
YN LI C GN+ AY + M G V
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLV 396
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 123/269 (45%), Gaps = 24/269 (8%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
LY +M +SP+ T+ ++ +C V EA + + + G P +Y+ I+ C
Sbjct: 142 LYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+ KE+ A ++ EM G + +Y LI L +++ EA L +M P R
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR 261
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 214
TY L++A C G+ S+ +L ++ + G P Y LI C DE
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSESG--------IKPDDCMYTVLIQSFCSGDTLDE 313
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 274
A +L M E L P+ ++Y+A+I GF + + + KA L +M L+Q+ L
Sbjct: 314 ASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKM--------LEQN----L 360
Query: 275 VKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
V DL T+++L+ C+ + A +L
Sbjct: 361 VPDLI---TYNTLIAGQCSSGNLDSAYRL 386
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ TY LI A C + + + L+ QM + P++ Y +I+ FC +
Sbjct: 258 PNVRTYTVLIDALCGSGQKS-------EAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDT 310
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++EA G+L M E GL P+ +Y+ +I FCK K + KA+ + +ML++ + PD+ Y
Sbjct: 311 LDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNT 369
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
LI C L A L M G+ P RT
Sbjct: 370 LIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 1 MTDPDC----VTYNTLISAACEAEK-NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMI 55
MT C V+Y LI EA+K + LS+ +V++ C PN TY +I
Sbjct: 216 MTQNGCHRNEVSYTQLIYGLFEAKKIDEALSL----LVKMKDDNCC----PNVRTYTVLI 267
Query: 56 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 115
C + EA+ + + M+E G+ P Y+ +I FC + +A + ML+ G+
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 116 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 175
P+V Y LI+ C ++ + +A L +ML + + P TY+TL+ C G + L
Sbjct: 328 PNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRL 386
Query: 176 QDEVIQKGFLP 186
+ + G +P
Sbjct: 387 LSLMEESGLVP 397
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 206/506 (40%), Gaps = 59/506 (11%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD ++YN+LI C + S+ + + +C P+ ++ + F
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFIC----KPDIVSFNSLFNGFSKMK 143
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++E + +M K SP+ +YS I FCK+ E+ AL+ M + P+V +
Sbjct: 144 MLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFT 202
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI C L A L++EM MS TY L++ +C KGE + + +++
Sbjct: 203 CLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQR--PDEALEILRGMPEMLLDPDEVSYSAVISG 240
P+ + Y +I G FFQR D A++ L M + D +Y +ISG
Sbjct: 263 --------RVEPNSLVYTTIIDG--FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 300
+L++A E+ +M++ + LV D+ F++++N Y + + A
Sbjct: 313 LCGNGKLKEATEIVEDMEKSD------------LVPDMV---IFTTMMNAYFKSGRMKAA 357
Query: 301 LKLRY---QAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
+ + + + + PD V+ +++G+ K A IV C+ + ++Y +LI
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA-------IVYFCIEKANDVMYTVLI 410
Query: 358 EK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNV 416
+ C +F V L GLV P+ +Y I C GN+
Sbjct: 411 DALCKEGDFIEVERLFSKISEAGLV----------------PDKFMYTSWIAGLCKQGNL 454
Query: 417 HKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQLKIL 476
A+ + M+ G + + + LI L E V L S DS +L
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514
Query: 477 DEIDPERCIIYALLDVLAEKAMDGLL 502
+ + A D+L + GL+
Sbjct: 515 IRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 171/411 (41%), Gaps = 60/411 (14%)
Query: 69 GILRL-----MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
GIL L + +G +PH S++ ++S CK ++ A ++ M G PDV +Y
Sbjct: 37 GILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNS 96
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C + A + + LR S G +V L FSK+ L + + G
Sbjct: 97 LIDGHCRNGDIRSASLVLES--LRA-SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMG 153
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ + SP++VTY+ I C AL+ M L P+ V+++ +I G+ +
Sbjct: 154 VM---LKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK 210
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 300
+L A L EM + V+ N T+++L++ +C + +AE
Sbjct: 211 AGDLEVAVSLYKEMRR---------------VRMSLNVVTYTALIDGFCKKGEMQRAEEM 255
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHC-LTIPSYIIYDILIEK 359
+ + P+S+ Y +++G ++ S A + L + L I +Y + I+
Sbjct: 256 YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV--IISGL 313
Query: 360 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
C N + K E+V+ LV P+ ++ ++ + G + A
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLV----------------PDMVIFTTMMNAYFKSGRMKAA 357
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKAL------------YCDERYNEMSWVI 458
+MY +++ GF + ++ +I + +C E+ N++ + +
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTV 408
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 129/325 (39%), Gaps = 49/325 (15%)
Query: 147 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 206
RG +P +++++V C G+ ++++ +P + P +++YN+LI G
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQV----KFAEDIVHS--MPRF--GCEPDVISYNSLIDGH 101
Query: 207 CF---FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 263
C + LE LR + PD VS++++ +GF +++ L + F M + C
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM--LKCC 159
Query: 264 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLL 320
P N T+S+ ++ +C + ++ALK + + P+ V++ L+
Sbjct: 160 SP--------------NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLI 205
Query: 321 NGLHKKATSRFATRLLL-FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRG 379
+G K A L V L + +Y L+ GF +G
Sbjct: 206 DGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY------------------TALIDGFCKKG 247
Query: 380 LVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVL 439
+ A M+ P VY +I G+ A +ML+ G + +
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 440 ALIKALYCDERYNEMSWVIRNTLRS 464
+I L + + E + ++ + +S
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKS 332
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 178/429 (41%), Gaps = 45/429 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +TY+ LIS+ + +N + + L+ +M + P E Y ++ ++ +
Sbjct: 231 PDTITYSALISSYEKLGRNDS-------AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VE+A+ + M G SP +Y+ +I K + +A +ML G+ PDV
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN 343
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ +L R+ E ++F EM + +P +Y+T+++A F H+ + +
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL-----FESKAHVSE--VSSW 396
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
F S SPS TY+ LI G C R ++AL +L M E P +Y ++I+ +
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ A EL E+ KE + ++K S V+ + ++
Sbjct: 457 AKRYEAANELFKEL--KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFN---------EM 505
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLT-IPSYIIYDILIEKCAN 362
+ Q PD +Y L++G+ K A LL C I S+ I
Sbjct: 506 KNQGSG-PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI---------- 554
Query: 363 NEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDM 422
++ GF G+ A +T+ H +P+G YN L+ G +A M
Sbjct: 555 --------ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARM 606
Query: 423 YKEMLHYGF 431
+EM GF
Sbjct: 607 MREMKDKGF 615
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 16/279 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P V+YNT+I A E++ + + + + +M +SP+E TY +I +C NR
Sbjct: 371 PTVVSYNTVIKALFESKAHVS------EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VE+A+ +L M EKG P +Y +I+ K K A E+ E+ + Y +
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV 484
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I+ +L EA DLF EM +G P Y+ L+ G ++ L ++ + G
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ ++N +++G P A+E+ + + PD V+Y+ ++ F
Sbjct: 545 --------CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAH 596
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD 282
+A + EM K+ + D T S++ + N D
Sbjct: 597 AGMFEEAARMMREM--KDKGFEYDAITYSSILDAVGNVD 633
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 131/328 (39%), Gaps = 35/328 (10%)
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L++ L + + +A +F + R P TY++++ +G+ KV + E+ +G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P +TY+ALI R D A+ + M + + P E Y+ ++ + +
Sbjct: 228 -------DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFK 280
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ ++ KA +L EM ++ C P E L+K L D+A K
Sbjct: 281 VGKVEKALDLFEEM-KRAGCSPTVYTYTE-LIKGLGKAGRV----------DEAYGFYKD 328
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANN 363
+ PD V L+N L K R +F + P+ + Y+ +I+
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGK--VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL--- 383
Query: 364 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
F + V+E + D M + P Y++LI +C V KA +
Sbjct: 384 -----------FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 424 KEMLHYGFVCHMFSVLALIKALYCDERY 451
+EM GF + +LI AL +RY
Sbjct: 433 EEMDEKGFPPCPAAYCSLINALGKAKRY 460
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVREL-SPNETTYRCMIRLFCDR 61
+PD VTYNTLI C++ + + S E++ + + SP+ TY MI +C
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKAS-------EMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
++ EA +L M G+ P +++ ++ + K EM A E++ +M+ G FPDV +
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
LI C ++ + L++EM RGM P TY L+ A C + K L ++
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
K +P P + YN +I G C + +EA I+ M + PD+++++ +I G
Sbjct: 411 KDIIP------QPFM--YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 146/324 (45%), Gaps = 52/324 (16%)
Query: 41 VRELSPNET-TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEM 99
+R S N+T T+ +IR C + E+A+ +L +M+ G P +Y+ +I FCK+ E+
Sbjct: 198 LRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNEL 257
Query: 100 GKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 158
KA EM ++ + PDV Y +I C ++ EA L +ML G+ P T++
Sbjct: 258 NKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 159 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS------------------------- 193
LV+ Y GE ++ ++I G P VT S
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 194 --PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 251
P+ TY+ LI+ LC R +A E+L + + P Y+ VI GF + ++ +A
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 252 ELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL- 310
+ EM++K+ C P + TF+ L+ +C + + A+ + ++ +
Sbjct: 438 VIVEEMEKKK-CKP--------------DKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 311 --PDSVSY-----CLLLNGLHKKA 327
PD ++ CLL G+ K+A
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEA 506
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 194/442 (43%), Gaps = 53/442 (11%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
TYN L + C+A H+L+ +++ M +SPN ++ F ++ ++ A
Sbjct: 105 TYNLLTRSLCKAGL-HDLA------GQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 68 VGILRLMAE-KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 126
+L E +G +S +++ K + A+++ E L D + +LI+
Sbjct: 158 TALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 127 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
LC + +A +L M G P TY+TL++ +C E +K + +V + G
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSG--- 270
Query: 187 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 246
+ SP +VTY ++I G C + EA +L M + + P V+++ ++ G+ + E
Sbjct: 271 ---SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 247 LRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ 306
+ A E++ +M C+P + TF+SL++ YC + +L +
Sbjct: 328 MLTAEEIRGKMIS-FGCFP--------------DVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 307 AQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANN 363
P++ +Y +L+N L + +R L +A IP +Y+ +I+
Sbjct: 373 MNARGMFPNAFTYSILINALCNE--NRLLKARELLGQLASKDIIPQPFMYNPVID----- 425
Query: 364 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
GF G VNEA + M + +P+ + +LI HC+ G + +A ++
Sbjct: 426 ----------GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 424 KEMLHYGFVCHMFSVLALIKAL 445
+M+ G +V +L+ L
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCL 497
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VT+ +LI C + + L+ +M R + PN TY +I C+ NR
Sbjct: 345 PDVVTFTSLIDGYCRVGQ-------VSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ +A +L +A K + P Y+ +I FCK ++ +A + EM K PD + +
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C + R+ EA +F +M+ G SP T +L+ G + +HL +++ +KG
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLS---------------IPYVRIVELYHQ----MCVRE 43
PD VTY ++IS C+A K S + + +V+ Y + + E
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 44 LS---------PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
+ P+ T+ +I +C +V + + M +G+ P+A +YS +I+ C
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+ KA E+ ++ K I P Y +I C ++ EA + +EM + P
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 190
T+ L+ +C+KG + + +++ G P +T
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 108/286 (37%), Gaps = 40/286 (13%)
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
S TYN L LC D A ++ M + P+ ++S F +L A L
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 255 LEMDQKETCWPLDQDTNESLVK------------------DLSNHDTFSSLVNDYCAEDK 296
L+ + E C + +LVK ++ TF+ L+ C K
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 297 AEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIY 353
AE AL+L PD V+Y L+ G K ++ L S +
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCK----------------SNELNKASEMFK 265
Query: 354 DILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG 413
D+ + + + ++ G+ G + EA+ D ML P +N+L+ +
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 414 GNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 459
G + A ++ +M+ +G + + +LI YC R ++S R
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDG-YC--RVGQVSQGFR 368
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVREL-SPNETTYRCMIRLFCDR 61
+PD VTYNTLI C++ + + S E++ + + SP+ TY MI +C
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKAS-------EMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
++ EA +L M G+ P +++ ++ + K EM A E++ +M+ G FPDV +
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
LI C ++ + L++EM RGM P TY L+ A C + K L ++
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
K +P P + YN +I G C + +EA I+ M + PD+++++ +I G
Sbjct: 411 KDIIP------QPFM--YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 146/324 (45%), Gaps = 52/324 (16%)
Query: 41 VRELSPNET-TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEM 99
+R S N+T T+ +IR C + E+A+ +L +M+ G P +Y+ +I FCK+ E+
Sbjct: 198 LRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNEL 257
Query: 100 GKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 158
KA EM ++ + PDV Y +I C ++ EA L +ML G+ P T++
Sbjct: 258 NKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 159 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS------------------------- 193
LV+ Y GE ++ ++I G P VT S
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 194 --PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 251
P+ TY+ LI+ LC R +A E+L + + P Y+ VI GF + ++ +A
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 252 ELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL- 310
+ EM++K+ C P + TF+ L+ +C + + A+ + ++ +
Sbjct: 438 VIVEEMEKKK-CKP--------------DKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 311 --PDSVSY-----CLLLNGLHKKA 327
PD ++ CLL G+ K+A
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEA 506
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 194/442 (43%), Gaps = 53/442 (11%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
TYN L + C+A H+L+ +++ M +SPN ++ F ++ ++ A
Sbjct: 105 TYNLLTRSLCKAGL-HDLA------GQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 68 VGILRLMAE-KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 126
+L E +G +S +++ K + A+++ E L D + +LI+
Sbjct: 158 TALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 127 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
LC + +A +L M G P TY+TL++ +C E +K + +V + G
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSG--- 270
Query: 187 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 246
+ SP +VTY ++I G C + EA +L M + + P V+++ ++ G+ + E
Sbjct: 271 ---SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 247 LRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ 306
+ A E++ +M C+P + TF+SL++ YC + +L +
Sbjct: 328 MLTAEEIRGKMIS-FGCFP--------------DVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 307 AQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANN 363
P++ +Y +L+N L + +R L +A IP +Y+ +I+
Sbjct: 373 MNARGMFPNAFTYSILINALCNE--NRLLKARELLGQLASKDIIPQPFMYNPVID----- 425
Query: 364 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 423
GF G VNEA + M + +P+ + +LI HC+ G + +A ++
Sbjct: 426 ----------GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 424 KEMLHYGFVCHMFSVLALIKAL 445
+M+ G +V +L+ L
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCL 497
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VT+ +LI C + + L+ +M R + PN TY +I C+ NR
Sbjct: 345 PDVVTFTSLIDGYCRVGQ-------VSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ +A +L +A K + P Y+ +I FCK ++ +A + EM K PD + +
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C + R+ EA +F +M+ G SP T +L+ G + +HL +++ +KG
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLS---------------IPYVRIVELYHQ----MCVRE 43
PD VTY ++IS C+A K S + + +V+ Y + + E
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 44 LS---------PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
+ P+ T+ +I +C +V + + M +G+ P+A +YS +I+ C
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+ KA E+ ++ K I P Y +I C ++ EA + +EM + P
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 190
T+ L+ +C+KG + + +++ G P +T
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 108/286 (37%), Gaps = 40/286 (13%)
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
S TYN L LC D A ++ M + P+ ++S F +L A L
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 255 LEMDQKETCWPLDQDTNESLVK------------------DLSNHDTFSSLVNDYCAEDK 296
L+ + E C + +LVK ++ TF+ L+ C K
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 297 AEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIY 353
AE AL+L PD V+Y L+ G K ++ L S +
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCK----------------SNELNKASEMFK 265
Query: 354 DILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG 413
D+ + + + ++ G+ G + EA+ D ML P +N+L+ +
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 414 GNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 459
G + A ++ +M+ +G + + +LI YC R ++S R
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDG-YC--RVGQVSQGFR 368
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 196/471 (41%), Gaps = 63/471 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYV-RIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD TYNTL+ C A YV ++L QMC +E+ P TY +++ +
Sbjct: 399 PDHHTYNTLVDGYCRA--------GYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ + + ++M ++G++ S S ++ K + +A+++ +L +G+ D
Sbjct: 451 AFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLN 510
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++I LC ++ EA+++ + + P +TY L Y G + F +++ + +K
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK 570
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G P ++ YN LI G ++ ++ +++ + L P +Y A+I+G+
Sbjct: 571 GIFP--------TIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWC 622
Query: 243 RIRELRKAFELKLEMDQK-------------ETCWPLDQDTNESLVKDLSNHDTFSSLVN 289
I + KA+ EM +K + + LD+ L+ L F L+
Sbjct: 623 NIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLL--LQKIVDFDLLLP 680
Query: 290 DYCA-----EDKAEMALKLRYQAQ----------YLPDSVSYCLLLNGLHKKATSRFATR 334
Y + E A LK + A+ +P+++ Y + + GL K A R
Sbjct: 681 GYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDA-R 739
Query: 335 LLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHR 394
L +++ IP Y ILI CA + G +N+A RD M +
Sbjct: 740 KLFSDLLSSDRFIPDEYTYTILIHGCA---------------IAGDINKAFTLRDEMALK 784
Query: 395 NYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
P YN LI C GNV +A + ++ G + + LI L
Sbjct: 785 GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 179/435 (41%), Gaps = 52/435 (11%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
+ VTYN+LI+ ++ R++ L M R +S N TY +I+ +C + +
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMT----RVLRL---MSERGVSRNVVTYTSLIKGYCKKGLM 312
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EEA + L+ EK L Y ++ +C+ ++ A+ + M++ G+ + L
Sbjct: 313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSL 372
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I C +L+EA +F M + P TY+TLV+ YC G + L D++ QK
Sbjct: 373 INGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
+ P+++TYN L+ G + L + + M + ++ DE+S S ++ ++
Sbjct: 433 V--------PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKL 484
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 304
+ +A +L W N L++ T + +++ C +K A ++
Sbjct: 485 GDFNEAMKL----------WE-----NVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 305 YQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCA 361
P +Y L +G +K + A + + + P+ +Y+ LI
Sbjct: 530 DNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY--MERKGIFPTIEMYNTLISGAF 587
Query: 362 N-NEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 420
V +LV R RGL P A Y LI C G + KAY
Sbjct: 588 KYRHLNKVADLVIELRARGLT----------------PTVATYGALITGWCNIGMIDKAY 631
Query: 421 DMYKEMLHYGFVCHM 435
EM+ G ++
Sbjct: 632 ATCFEMIEKGITLNV 646
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 140/314 (44%), Gaps = 54/314 (17%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P YNTLIS A K +L+ ++ +L ++ R L+P TY +I +C+
Sbjct: 574 PTIEMYNTLISGAF---KYRHLN----KVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD------------ 111
+++A M EKG++ + + S+I + + ++ +A + +++D
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 112 --------------------------KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 145
K + P+ Y + I LC +L +AR LF ++L
Sbjct: 687 EFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Query: 146 LRG-MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 204
P TY L+ + G+ +K F L+DE+ KG +P ++VTYNALI
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIP--------NIVTYNALIK 798
Query: 205 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 264
GLC D A +L +P+ + P+ ++Y+ +I G + + +A LK +M +K
Sbjct: 799 GLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVR 858
Query: 265 PLDQDTNESLVKDL 278
D+ + + K++
Sbjct: 859 GSDKQGDVDIPKEV 872
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 149/374 (39%), Gaps = 74/374 (19%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +T N +IS C+ EK + E+ + + P TY+ + + +
Sbjct: 505 DTITLNVMISGLCKMEKVNEAK-------EILDNVNIFRCKPAVQTYQALSHGYYKVGNL 557
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+EA + M KG+ P + Y+ +IS K + + K ++ +E+ +G+ P V YG L
Sbjct: 558 KEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGAL 617
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMS---------------------------------- 150
I C+ + +A EM+ +G++
Sbjct: 618 ITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDL 677
Query: 151 --PGGRTYDTLVEA---YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 205
PG ++ +EA CLK + K+ + K L P+ + YN I G
Sbjct: 678 LLPGYQSLKEFLEASATTCLKTQ--KIAESVENSTPKKLL-------VPNNIVYNVAIAG 728
Query: 206 LCFFQRPDEALEILRGM-PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 264
LC + ++A ++ + PDE +Y+ +I G ++ KAF L+ EM K
Sbjct: 729 LCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGI-- 786
Query: 265 PLDQDTNESLVKDLSNHDTFSSLVNDYCA---EDKAEMALKLRYQAQYLPDSVSYCLLLN 321
+ N T+++L+ C D+A+ L Q P++++Y L++
Sbjct: 787 -------------IPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLID 833
Query: 322 GLHKKATSRFATRL 335
GL K A RL
Sbjct: 834 GLVKSGNVAEAMRL 847
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 162/410 (39%), Gaps = 44/410 (10%)
Query: 70 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 129
++R+ E SP + I+ + + + AL + M + G P + + L+ L
Sbjct: 144 LVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLV 201
Query: 130 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 189
+ A ++ +M+ +SP T +V AYC G K E
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESS------- 254
Query: 190 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 249
++VTYN+LI+G + +LR M E + + V+Y+++I G+ +
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCK------ 308
Query: 250 AFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQY 309
K M++ E + L ++ K +++ + L++ YC + A+++
Sbjct: 309 ----KGLMEEAEHVFELLKEK-----KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359
Query: 310 LPDSVSYCL---LLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFK 366
+ + + L+NG K A ++ F + P + Y+ L++
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQI--FSRMNDWSLKPDHHTYNTLVD-------- 409
Query: 367 SVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
G+ G V+EA + D M + P YN+L+ + G H ++K M
Sbjct: 410 -------GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 427 LHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQLKIL 476
L G S L++AL+ +NE + N L L D+ L ++
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 163/381 (42%), Gaps = 46/381 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRI-VELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD +TYN +I C+ K H +R + L M + P+ TY +IR D
Sbjct: 172 PDTITYNMIIGNLCK--KGH------IRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYG 223
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
E+A+ + + G P +Y+ ++ C+ +A+E+ +M +G +PD+ Y
Sbjct: 224 NAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYN 283
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+ C + L E + Q +L G+ TY+TL+ + C + +V +E++
Sbjct: 284 SLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV----EEILNI 339
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
Y TS+ P+++TYN LI+GLC + A++ M E PD V+Y+ V+
Sbjct: 340 ----MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMS 395
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD-------------------- 282
+ + A EL + K TC P T S++ L+
Sbjct: 396 KEGMVDDAIELLGLL--KNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 283 --TFSSLVNDYCAEDKAEMALKLRYQAQYLPDSV---SYCLLLNGLHKKATSRFATRLLL 337
T SL+ +C + E A ++ + + + +Y L++ GL KK A ++
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVE 513
Query: 338 FYIVAHCLTIPSYIIYDILIE 358
+ C P IY +++
Sbjct: 514 IMLTGGCK--PDETIYTAIVK 532
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 179/433 (41%), Gaps = 51/433 (11%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 106
+E T ++ C ++ +A ++ +MA PH S S ++ + ++ KA+ +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
M+ G PD Y ++I LC + + A L ++M L G P TY+T++
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G + + +Q G P+ ++TY L+ +C + A+E+L M
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPF--------MITYTVLVELVCRYCGSARAIEVLEDMAVEG 274
Query: 227 LDPDEVSYSAVIS-GFRR--IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 283
PD V+Y+++++ RR + E+ + L + L+ T +L+ L +H+
Sbjct: 275 CYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLE-----LNTVTYNTLLHSLCSHEY 329
Query: 284 FSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL-LFYIVA 342
+ D+ E L + YQ Y P ++Y +L+NGL K +R +R + FY +
Sbjct: 330 W----------DEVEEILNIMYQTSYCPTVITYNILINGLCK---ARLLSRAIDFFYQML 376
Query: 343 HCLTIPSYIIYD--------------------ILIEKCANNEFKSVVELVKGFRMRGLVN 382
+P + Y+ +L C + ++ G +GL+
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 383 EAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI 442
+A ML P+ LI+ C V +A + KE + G + +I
Sbjct: 437 KALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVI 496
Query: 443 KALYCDERYNEMS 455
+ L C ++ EM+
Sbjct: 497 QGL-CKKKEIEMA 508
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 34/268 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTYN+L++ C + NL + + + L N TY ++ C
Sbjct: 277 PDIVTYNSLVNYNC---RRGNLE----EVASVIQHILSHGLELNTVTYNTLLHSLCSHEY 329
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E IL +M + P +Y+ +I+ CK + + +A++ +ML++ PD+ Y
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ + + + +A +L + PG TY+++++ KG K L +++ G
Sbjct: 390 VLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG 449
Query: 184 FLPYYVTSFS-------PSLV--------------------TYNALIHGLCFFQRPDEAL 216
P +T S +LV TY +I GLC + + A+
Sbjct: 450 IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRI 244
E++ M PDE Y+A++ G +
Sbjct: 510 EVVEIMLTGGCKPDETIYTAIVKGVEEM 537
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 168/361 (46%), Gaps = 52/361 (14%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCM-----IRLF 58
P+ VTY TL+SA C+ K + VR + VR L + C+ I +
Sbjct: 205 PNLVTYTTLVSALCQLGK-----VDEVRDL-------VRRLEDEGFEFDCVFYSNWIHGY 252
Query: 59 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 118
+ +A+ R M EKG++ SYS +I K + +AL + +M+ +G+ P++
Sbjct: 253 FKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNL 312
Query: 119 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 178
Y +I+ LC +L EA LF +L G+ Y TL++ C KG ++ F + +
Sbjct: 313 ITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 179 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
+ Q+G PS++TYN +I+GLC R EA E+ +G+ D ++YS ++
Sbjct: 373 MEQRG--------IQPSILTYNTVINGLCMAGRVSEADEVSKGVV-----GDVITYSTLL 419
Query: 239 SGFRRIR------ELRKAF-ELKLEMD-------QKETCWPLDQDTNESLVKDLSNHD-- 282
+ +++ E+R+ F E K+ MD K ++L + + D
Sbjct: 420 DSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479
Query: 283 ----TFSSLVNDYCAEDKAEMALKL--RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL 336
T+++++ YC + E AL++ + + +V Y +++ L KK AT +L
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVL 539
Query: 337 L 337
+
Sbjct: 540 I 540
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 173/420 (41%), Gaps = 82/420 (19%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY--SRIISRFCKNKEMGKAL 103
P+ T+ +I F ++ ++ A+ +L +M K ++ D++ S +IS FCK + AL
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 104 EMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQ-------------------- 142
+D G+ P++ Y L+ LC ++ E RDL +
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 143 ---------------EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 187
EM+ +GM+ +Y L++ +G + L ++I++G
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV--- 308
Query: 188 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 247
P+L+TY A+I GLC + +EA + + + ++ DE Y +I G R L
Sbjct: 309 -----EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL 363
Query: 248 RKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA 307
+AF + +M+Q+ S++ T+++++N C + A ++
Sbjct: 364 NRAFSMLGDMEQR--------GIQPSIL-------TYNTVINGLCMAGRVSEADEV--SK 406
Query: 308 QYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIP-SYIIYDILIEKCANNEFK 366
+ D ++Y LL+ K + ++ A IP ++ +IL+
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK---IPMDLVMCNILL--------- 454
Query: 367 SVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
K F + G EA M + P+ A Y +I +C G + +A +M+ E+
Sbjct: 455 ------KAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 168/414 (40%), Gaps = 97/414 (23%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
LY M +L+P+ TY MI+ +C ++EEA+ + + + +S A Y+RII C
Sbjct: 469 LYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALC 527
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHA---------------------YGL---------- 123
K + A E+ +E+ +KG++ D+H YGL
Sbjct: 528 KKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLG 587
Query: 124 ----LIQLLCHQRRLLEARDLFQEMLLRGMSPG--GRTYDTLV------EAYCLKGEFSK 171
I LLC + A +++ M +G++ TLV +AY L +
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGE 647
Query: 172 VFHLQDEVI----------QKGFL--PYYVTSFSPS------LVTYNALIHGLCFFQRPD 213
+VI ++GFL + SF+ S +TYN+LI+GLC
Sbjct: 648 TTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLV 707
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 273
EAL + + + L P EV+Y +I + A +L LD ++
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKL------------LDSMVSKG 755
Query: 274 LVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSR 330
LV ++ ++S+V+ YC + E A+++ + + PD+ + ++ G KK
Sbjct: 756 LVPNII---IYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDME 812
Query: 331 FATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 384
A ++ +K + +F + L+KGF +G + EA
Sbjct: 813 EALS-----------------VFTEFKDKNISADFFGFLFLIKGFCTKGRMEEA 849
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 110/253 (43%), Gaps = 12/253 (4%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
Y +I C + +A+ + +G++ + +Y+ +I+ C+ + +AL + +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
+ G+ P YG+LI LC + L+A L M+ +G+ P Y+++V+ YC G+
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
V+ + + +P T +++I G C +EAL + + + D
Sbjct: 778 DAMR----VVSRKMMG----RVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 290
+ +I GF + +A L EM E+ L + +L+ ++ + +
Sbjct: 830 FFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVD----AELAESESIRGFLVE 885
Query: 291 YCAEDKAEMALKL 303
C + + A+K+
Sbjct: 886 LCEQGRVPQAIKI 898
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P VTY LI C+ ++ +L M + L PN Y ++ +C +
Sbjct: 723 PSEVTYGILIDNLCKEG-------LFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQ 775
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E+A+ ++ ++P A + S +I +CK +M +AL + E DK I D +
Sbjct: 776 TEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 835
Query: 124 LIQLLCHQRRLLEARDLFQEMLL 146
LI+ C + R+ EAR L +EML+
Sbjct: 836 LIKGFCTKGRMEEARGLLREMLV 858
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 92/222 (41%), Gaps = 15/222 (6%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
++ D + Y +I+ C+ V+ + L R ++ N TY +I C
Sbjct: 650 LSSMDVIDYTIIINGLCKEG-------FLVKALNLCSFAKSRGVTLNTITYNSLINGLCQ 702
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+ + EA+ + + GL P +Y +I CK A ++ M+ KG+ P++
Sbjct: 703 QGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIII 762
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y ++ C + +A + ++ ++P T ++++ YC KG+ + +
Sbjct: 763 YNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSV----- 817
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 222
F + + S + LI G C R +EA +LR M
Sbjct: 818 ---FTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 26/307 (8%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+ Y +M ++SPN T ++ +C ++++ + +L+ M G SY+ +I+
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG 282
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
C+ + AL++K M G+ P+V + LI C +L EA +F EM ++P
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
TY+TL+ Y +G+ F ++++ G ++TYNALI GLC +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNG--------IQRDILTYNALIFGLCKQAKT 394
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
+A + ++ + + L P+ ++SA+I G + + FEL M + C P
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM-IRSGCHP------- 446
Query: 273 SLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATS 329
N TF+ LV+ +C D A L+ + DS + + NGL +
Sbjct: 447 -------NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
Query: 330 RFATRLL 336
+ +LL
Sbjct: 500 QLVKKLL 506
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 15/255 (5%)
Query: 7 VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEE 66
V+YNTLI+ CE ++L + M L PN T+ +I FC +++E
Sbjct: 274 VSYNTLIAGHCEKG-------LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 67 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 126
A + M ++P+ +Y+ +I+ + + + A +M+ GI D+ Y LI
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 127 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
LC Q + +A +E+ + P T+ L+ C++ + F L +I+ G
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC-- 444
Query: 187 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 246
P+ T+N L+ C + D A ++LR M + D + V +G + +
Sbjct: 445 ------HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Query: 247 LRKAFELKLEMDQKE 261
+ +L EM+ K+
Sbjct: 499 DQLVKKLLQEMEGKK 513
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 140/336 (41%), Gaps = 29/336 (8%)
Query: 42 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 101
RE + + + F + A M + G P +S + +S +
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 102 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
AL EM I P+ + +++ C +L + +L Q+M G +Y+TL+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 162 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 221
+C KG S L++ + + G P++VT+N LIHG C + EA ++
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSG--------LQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 222 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNH 281
M + + P+ V+Y+ +I+G+ + + AF +M C + +D
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM----VCNGIQRDI----------- 378
Query: 282 DTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLF 338
T+++L+ C + K A +K + +P+S ++ L+ G + + L
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 339 YIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVK 373
I + C P+ +++L+ C N +F ++++
Sbjct: 439 MIRSGCH--PNEQTFNMLVSAFCRNEDFDGASQVLR 472
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 143/349 (40%), Gaps = 55/349 (15%)
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L + H ++ A D F +M G P + + + + +G E+ +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRR-- 231
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
SP+ T N ++ G C + D+ +E+L+ M + +VSY+ +I+G
Sbjct: 232 ------CKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
L A +LK M K P N TF++L++ +C K + A K+
Sbjct: 286 KGLLSSALKLK-NMMGKSGLQP--------------NVVTFNTLIHGFCRAMKLQEASKV 330
Query: 304 RYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYII-YDILIEK 359
+ + + P++V+Y L+NG ++ A R FY C I I+ Y+ LI
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR---FYEDMVCNGIQRDILTYNALIFG 387
Query: 360 -CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 418
C + + + VK LV P + ++ LI C+ N +
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLV----------------PNSSTFSALIMGQCVRKNADR 431
Query: 419 AYDMYKEMLHYGFVCH----MFSVLALIKALYCDERYNEMSWVIRNTLR 463
+++YK M+ G CH F++ L+ A +E ++ S V+R +R
Sbjct: 432 GFELYKSMIRSG--CHPNEQTFNM--LVSAFCRNEDFDGASQVLREMVR 476
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VT+NTLI C A K S +++ +M ++PN TY +I + +
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEAS-------KVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E A M G+ +Y+ +I CK + KA + E+ + + P+ +
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI C ++ +L++ M+ G P +T++ LV A+C +F + E++++
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +TYN LI C+ K + + ++ L PN +T+ +I C R
Sbjct: 377 DILTYNALIFGLCKQAKTR-------KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+ + + M G P+ +++ ++S FC+N++ A ++ EM+ + I D +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 125 IQLLCHQRRLLEARDLFQEM 144
L HQ + + L QEM
Sbjct: 490 CNGLKHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 26/307 (8%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+ Y +M ++SPN T ++ +C ++++ + +L+ M G SY+ +I+
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG 282
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
C+ + AL++K M G+ P+V + LI C +L EA +F EM ++P
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
TY+TL+ Y +G+ F ++++ G ++TYNALI GLC +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNG--------IQRDILTYNALIFGLCKQAKT 394
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
+A + ++ + + L P+ ++SA+I G + + FEL M + C P
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM-IRSGCHP------- 446
Query: 273 SLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATS 329
N TF+ LV+ +C D A L+ + DS + + NGL +
Sbjct: 447 -------NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
Query: 330 RFATRLL 336
+ +LL
Sbjct: 500 QLVKKLL 506
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 15/255 (5%)
Query: 7 VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEE 66
V+YNTLI+ CE ++L + M L PN T+ +I FC +++E
Sbjct: 274 VSYNTLIAGHCEKG-------LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 67 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 126
A + M ++P+ +Y+ +I+ + + + A +M+ GI D+ Y LI
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 127 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
LC Q + +A +E+ + P T+ L+ C++ + F L +I+ G
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC-- 444
Query: 187 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 246
P+ T+N L+ C + D A ++LR M + D + V +G + +
Sbjct: 445 ------HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Query: 247 LRKAFELKLEMDQKE 261
+ +L EM+ K+
Sbjct: 499 DQLVKKLLQEMEGKK 513
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 140/336 (41%), Gaps = 29/336 (8%)
Query: 42 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 101
RE + + + F + A M + G P +S + +S +
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 102 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
AL EM I P+ + +++ C +L + +L Q+M G +Y+TL+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 162 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 221
+C KG S L++ + + G P++VT+N LIHG C + EA ++
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSG--------LQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 222 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNH 281
M + + P+ V+Y+ +I+G+ + + AF +M C + +D
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM----VCNGIQRDI----------- 378
Query: 282 DTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLF 338
T+++L+ C + K A +K + +P+S ++ L+ G + + L
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 339 YIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVK 373
I + C P+ +++L+ C N +F ++++
Sbjct: 439 MIRSGCH--PNEQTFNMLVSAFCRNEDFDGASQVLR 472
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 143/349 (40%), Gaps = 55/349 (15%)
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L + H ++ A D F +M G P + + + + +G E+ +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRR-- 231
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
SP+ T N ++ G C + D+ +E+L+ M + +VSY+ +I+G
Sbjct: 232 ------CKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
L A +LK M K P N TF++L++ +C K + A K+
Sbjct: 286 KGLLSSALKLK-NMMGKSGLQP--------------NVVTFNTLIHGFCRAMKLQEASKV 330
Query: 304 RYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYII-YDILIEK 359
+ + + P++V+Y L+NG ++ A R FY C I I+ Y+ LI
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR---FYEDMVCNGIQRDILTYNALIFG 387
Query: 360 -CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 418
C + + + VK LV P + ++ LI C+ N +
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLV----------------PNSSTFSALIMGQCVRKNADR 431
Query: 419 AYDMYKEMLHYGFVCH----MFSVLALIKALYCDERYNEMSWVIRNTLR 463
+++YK M+ G CH F++ L+ A +E ++ S V+R +R
Sbjct: 432 GFELYKSMIRSG--CHPNEQTFNM--LVSAFCRNEDFDGASQVLREMVR 476
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VT+NTLI C A K S +++ +M ++PN TY +I + +
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEAS-------KVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E A M G+ +Y+ +I CK + KA + E+ + + P+ +
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI C ++ +L++ M+ G P +T++ LV A+C +F + E++++
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +TYN LI C+ K + + ++ L PN +T+ +I C R
Sbjct: 377 DILTYNALIFGLCKQAKTR-------KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+ + + M G P+ +++ ++S FC+N++ A ++ EM+ + I D +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 125 IQLLCHQRRLLEARDLFQEM 144
L HQ + + L QEM
Sbjct: 490 CNGLKHQGKDQLVKKLLQEM 509
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 170/405 (41%), Gaps = 45/405 (11%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
PN ++ C NR+++A+ ++ LM G+ P A +Y+ ++++ CK +G A+++
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
+M D G + Y L++ LC L ++ + ++ +G++P TY L+EA
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
+ + L DE+I KG P+LV+YN L+ G C R D+A+ + R +P
Sbjct: 224 ERGTDEAVKLLDEIIVKG--------GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK 275
Query: 226 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 285
+ VSY+ ++ +A L EMD D S+V T++
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWEEANSLLAEMD--------GGDRAPSVV-------TYN 320
Query: 286 SLVNDYCAEDKAEMALKL-----RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYI 340
L+N + E AL++ + Q+ + SY ++ L K+ + L I
Sbjct: 321 ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Query: 341 VAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEG 400
C P+ Y+ + C +N V EA ++ ++
Sbjct: 381 YRRCK--PNEGTYNAIGSLCEHNS---------------KVQEAFYIIQSLSNKQKCCTH 423
Query: 401 AVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
Y +I C GN A+ + EM GF + ALI+ L
Sbjct: 424 DFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGL 468
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 145/361 (40%), Gaps = 85/361 (23%)
Query: 30 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 89
+R++EL M + P+ + Y ++ C R V A+ ++ M + G + +Y+ +
Sbjct: 126 IRVIEL---MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNAL 182
Query: 90 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 149
+ C + ++L+ ++ KG+ P+ Y L++ +R EA L E++++G
Sbjct: 183 VRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG 242
Query: 150 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------------- 190
P +Y+ L+ +C +G L E+ KGF V+
Sbjct: 243 EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANS 302
Query: 191 --------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMP------------------- 223
+PS+VTYN LI+ L F R ++AL++L+ M
Sbjct: 303 LLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIAR 362
Query: 224 ---------------EMLL---DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
EM+ P+E +Y+A+ S ++++AF + + K+ C
Sbjct: 363 LCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCC- 421
Query: 266 LDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNG 322
HD + S++ C + A +L Y+ + PD+ +Y L+ G
Sbjct: 422 --------------THDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRG 467
Query: 323 L 323
L
Sbjct: 468 L 468
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P VTYN LI++ + + + HQ V T+Y +I C +
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRV-----TATSYNPVIARLCKEGK 368
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V+ V L M + P+ +Y+ I S N ++ +A + + +K Y
Sbjct: 369 VDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKS 428
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS---KVFHLQDEVI 180
+I LC + A L EM G P TY L+ CL+G F+ +V + +E
Sbjct: 429 VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEES- 487
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+ P++ +NA+I GLC +R D A+E+ M E P+E +Y+ ++ G
Sbjct: 488 ---------ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEG 538
Query: 241 FRRIRELRKAFEL 253
EL A E+
Sbjct: 539 IAHEDELELAKEV 551
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 132/352 (37%), Gaps = 67/352 (19%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ TY+ L+ AA + V+L ++ V+ PN +Y ++ FC R
Sbjct: 209 PNAFTYSFLLEAAYKERGTD-------EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++A+ + R + KG + SY+ ++ C + +A + EM P V Y +
Sbjct: 262 TDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNI 321
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPG-------GRTYDTLVEAYCLKGEFSKVFHLQ 176
LI L R +A + +EM S G +Y+ ++ C +G+ V
Sbjct: 322 LINSLAFHGRTEQALQVLKEM-----SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCL 376
Query: 177 DEVIQKGFLP----------------------YYVTSFSPSLVT-----YNALIHGLCFF 209
DE+I + P Y + S S Y ++I LC
Sbjct: 377 DEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRK 436
Query: 210 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 269
A ++L M DPD +YSA+I G A E+ M++ E C P +
Sbjct: 437 GNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDN 496
Query: 270 TNESLV---------------------KDLSNHDTFSSLVNDYCAEDKAEMA 300
N ++ K + N T++ LV ED+ E+A
Sbjct: 497 FNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELA 548
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAE-KGLSPHADSYSRIISR 92
+L ++M P+ TY +IR C A+ +L +M E + P D+++ +I
Sbjct: 444 QLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILG 503
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 147
CK + A+E+ M++K P+ Y +L++ + H+ L A+++ E+ LR
Sbjct: 504 LCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 558
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 160/393 (40%), Gaps = 66/393 (16%)
Query: 50 TYRCM--IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 107
Y C+ I +C + EA+G L M KGL + S I+ +CK +ALE
Sbjct: 318 VYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFK 377
Query: 108 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 167
E D IF D Y + L R+ EA +L QEM RG+ P Y TL++ YCL+G
Sbjct: 378 EFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQG 437
Query: 168 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 227
+ L DE+I G SP L+TYN L+ GL +E LEI M
Sbjct: 438 KVVDALDLIDEMIGNG--------MSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGP 489
Query: 228 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSL 287
P+ V+ S +I G R++++A D FSSL
Sbjct: 490 KPNAVTNSVIIEGLCFARKVKEA------------------------------EDFFSSL 519
Query: 288 VNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAT-----RLLLFYIVA 342
C E+KA YC GL KKA F R ++ +
Sbjct: 520 -EQKCPENKASFV-------------KGYC--EAGLSKKAYKAFVRLEYPLRKSVYIKLF 563
Query: 343 HCLTIPSYI--IYDILIEKCAN--NEFKSVV-ELVKGFRMRGLVNEAARARDTMLHRNYR 397
L I Y+ +D+L + A +S+ +++ F V EA DTM+ R
Sbjct: 564 FSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI 623
Query: 398 PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
P+ Y ++I +C + KA ++++M G
Sbjct: 624 PDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 11/230 (4%)
Query: 55 IRLF---CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 111
I+LF C +E+A +L+ M+ + P ++I FCK + +A + M++
Sbjct: 560 IKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVE 619
Query: 112 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC-LKGEFS 170
+G+ PD+ Y ++I C L +A LF++M RG+ P TY L++ Y L E
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHH 679
Query: 171 KVFHLQDEVIQKG----FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
+ +Q EV ++ + +V Y LI C ++A E+ M +
Sbjct: 680 ETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSG 739
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 276
L+PD V+Y+ +IS + R + A L E+ +K + + ++ E+ VK
Sbjct: 740 LEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK---YNIPSESFEAAVK 786
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 174/420 (41%), Gaps = 56/420 (13%)
Query: 32 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 91
++ L+ Q+ L NE TY +++ C + +EEA L+ E + Y I+
Sbjct: 200 LMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAA---MLLIE---NESVFGYKTFIN 253
Query: 92 RFCKNKEMGKALEMKVEMLDKGIFP--DVHAY-GLLIQLLCHQRRLLEARDLFQEMLLRG 148
C E KA+ + +E++D+ D+ A G++++ C++ ++ A + EM G
Sbjct: 254 GLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIG 313
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
+++ YC + D+++ KG + V + ++ C
Sbjct: 314 FGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKG--------LKVNCVIVSLILQCYCK 365
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 268
EALE + +M + D V Y+ ++ + +AFEL EM +
Sbjct: 366 MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR-------- 417
Query: 269 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHK 325
+V D+ N+ T L++ YC + K AL L PD ++Y +L++GL +
Sbjct: 418 ----GIVPDVINYTT---LIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 470
Query: 326 KATSRFATRLLLFYIVAHCLTIPSYIIYDILIE--------KCANNEFKSV--------V 369
L ++ + P+ + ++IE K A + F S+
Sbjct: 471 NGHEE--EVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKA 528
Query: 370 ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHY 429
VKG+ GL +A +A + Y +VY L F CI G + KA+D+ K+M Y
Sbjct: 529 SFVKGYCEAGLSKKAYKA---FVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAY 585
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 160/410 (39%), Gaps = 65/410 (15%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
EL +M R + P+ Y +I +C + +V +A+ ++ M G+SP +Y+ ++S
Sbjct: 409 ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGL 468
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
+N + LE+ M +G P+ ++I+ LC R++ EA D F L P
Sbjct: 469 ARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSS--LEQKCPEN 526
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
+ + V+ YC G + +K + + + Y L LC +
Sbjct: 527 KA--SFVKGYCEAG-----------LSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLE 573
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 273
+A ++L+ M ++P +I F ++ +R+A L D
Sbjct: 574 KAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVL------------FDTMVERG 621
Query: 274 LVKDLSNHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLLLN--------- 321
L+ DL T++ +++ YC + KAE + Q PD V+Y +LL+
Sbjct: 622 LIPDLF---TYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEH 678
Query: 322 ----GLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFR 376
+ + R A+ +L + A + Y +LI++ C N + EL
Sbjct: 679 HETCSVQGEVGKRKASEVLREFSAAGIGL--DVVCYTVLIDRQCKMNNLEQAAELF---- 732
Query: 377 MRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
D M+ P+ Y LI + G + A + E+
Sbjct: 733 ------------DRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 144/321 (44%), Gaps = 32/321 (9%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
+ V Y T+I+ C+ + ++E ++CV +S Y +I F +
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIE-EKRLCVSCMS-----YNSIIDGFFKEGEM 600
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+ AV M G+SP+ +Y+ +++ CKN M +ALEM+ EM +KG+ D+ AYG L
Sbjct: 601 DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I C + + A LF E+L G++P Y++L+ + G L ++++ G
Sbjct: 661 IDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG- 719
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
L TY LI GL A E+ M + L PDE+ Y+ +++G +
Sbjct: 720 -------LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 304
+ K ++ EM +K P N +++++ + E + A +L
Sbjct: 773 GQFVKVVKMFEEM-KKNNVTP--------------NVLIYNAVIAGHYREGNLDEAFRLH 817
Query: 305 YQ---AQYLPDSVSYCLLLNG 322
+ LPD ++ +L++G
Sbjct: 818 DEMLDKGILPDGATFDILVSG 838
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 171/407 (42%), Gaps = 72/407 (17%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 113
++ C + + +EA +L M +G+ P+ SY+ ++ C+ K M A + +L+KG
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 114 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
+ P+ + Y +LI A ++ M + G Y T++ C G+ SK
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 174 HLQDEVIQ--------------------KGFLPYYVTSF--------SPSLVTYNALIHG 205
L +I+ +G + V ++ SP+++TY +L++G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
LC R D+ALE+ M + D +Y A+I GF + + A L E+ +E P
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL-LEEGLNP 687
Query: 266 LDQDTNESLVKDLSN----------------------HDTFSSLVNDYCAEDKAEMALKL 303
Q SL+ N T+++L++ + +A +L
Sbjct: 688 -SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 304 RYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
+ Q +PD + Y +++NGL KK +F + +F + P+ +IY+ +I
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKG--QFVKVVKMFEEMKKNNVTPNVLIYNAVI--- 801
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 407
G G ++EA R D ML + P+GA +++L+
Sbjct: 802 ------------AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 204/534 (38%), Gaps = 89/534 (16%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
D D VT L+ A+ EK +E+ + R P+ Y ++ C
Sbjct: 230 DGDNVTTQLLMRASLREEK-------PAEALEVLSRAIERGAEPDSLLYSLAVQACCKTL 282
Query: 63 RVEEAVGILRLMAEKGL-SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+ A +LR M EK L P ++Y+ +I K M A+ +K EML GI +V A
Sbjct: 283 DLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAA 342
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK---------- 171
LI C L+ A LF +M G SP T+ L+E + GE K
Sbjct: 343 TSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV 402
Query: 172 ------VFHLQDEVIQ---KG-----FLPYYVTSFSPSLVTY---NALIHGLCFFQRPDE 214
VFH+ +IQ KG L + SF L N ++ LC + DE
Sbjct: 403 LGLTPSVFHVH-TIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDE 461
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRIREL---RKAFELKLEMDQKETCWPLD---- 267
A E+L M + P+ VSY+ V+ G R + + R F LE K +
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521
Query: 268 ---QDTNESLVKDLSNHDT----------FSSLVNDYCAEDKAEMALKLRY----QAQYL 310
++ +E ++ NH T + +++N C + A +L + +
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581
Query: 311 PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVV 369
+SY +++G K+ + + + + P+ I Y L+ C NN +
Sbjct: 582 VSCMSYNSIIDGFFKEG--EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 370 E-------------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDH 410
E L+ GF R + A+ +L P +YN LI
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 411 CIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCD-------ERYNEMSWV 457
GN+ A D+YK+ML G C + + LI L D E Y EM V
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 172/425 (40%), Gaps = 50/425 (11%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
V++ +QM ++ P + RN + EA + M G+ + ++
Sbjct: 183 VDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRA 242
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM-SP 151
+ ++ +ALE+ +++G PD Y L +Q C L A L +EM + + P
Sbjct: 243 SLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVP 302
Query: 152 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 211
TY +++ A +G L+DE++ G S ++V +LI G C
Sbjct: 303 SQETYTSVILASVKQGNMDDAIRLKDEMLSDG--------ISMNVVAATSLITGHCKNND 354
Query: 212 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC-------- 263
AL + M + P+ V++S +I FR+ E+ KA E +M+
Sbjct: 355 LVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHT 414
Query: 264 ----WPLDQDT-------NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL-- 310
W Q +ES L+N +++++ C + K + A +L + +
Sbjct: 415 IIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474
Query: 311 -PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC-ANNEFKSV 368
P+ VSY ++ G H + + R++ I+ L P+ Y ILI+ C N++ ++
Sbjct: 475 GPNVVSYNNVMLG-HCRQKNMDLARIVFSNILEKGLK-PNNYTYSILIDGCFRNHDEQNA 532
Query: 369 VELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLH 428
+E+V + M N G VY +I C G KA ++ M+
Sbjct: 533 LEVV----------------NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 429 YGFVC 433
+C
Sbjct: 577 EKRLC 581
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 185/431 (42%), Gaps = 54/431 (12%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
+P TY C+I L+ ++ +A+ + R+M E+G+ + +YS +I+ F K K+ A
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
+ +M+ +G+ PDV Y +I C + A +EM P RT+ ++ Y
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
G+ + + D + + G + P++ T+N LI+GL ++ ++A+EIL M
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCV--------PTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 224 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 283
+ +E +Y+ ++ G+ + + KAFE + NE L D+ T
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ------------NEGLDVDIF---T 696
Query: 284 FSSLVNDYCAEDKAEMALKLRYQ--AQYLP-DSVSYCLLLNGLHKKATSRFATRLLLFYI 340
+ +L+ C + + AL + + A+ +P +S Y +L++G ++ A L+
Sbjct: 697 YEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI--QQ 754
Query: 341 VAHCLTIPSYIIYDILIEKCANN--------------------EFKSVVELVKGFRMRGL 380
+ P Y I C+ K+ L+KG+ L
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASL 814
Query: 381 VNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY------DMYKEMLHYGFVCH 434
+A + M +P+ AVY+ L+ ++ +AY + KEM+ G +
Sbjct: 815 PEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVD 874
Query: 435 MFSVLALIKAL 445
M + + K L
Sbjct: 875 MGTAVHWSKCL 885
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 124/299 (41%), Gaps = 20/299 (6%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 88
+ ++ M + P+ Y +I FC ++ A+ ++ M + P ++
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
II + K+ +M ++LE+ M G P VH + LI L +R++ +A ++ EM L G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
+S TY +++ Y G+ K F + +G + TY AL+ C
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG--------LDVDIFTYEALLKACCK 706
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 268
R AL + + M + + Y+ +I G+ R ++ +A +L + Q
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADL------------IQQ 754
Query: 269 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 327
E + D+ + +F S + ++A ++ P+ +Y L+ G + +
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/487 (20%), Positives = 208/487 (42%), Gaps = 63/487 (12%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
R E + +M R ++P Y +I + ++EA+ +R M E+G+ +YS I+
Sbjct: 327 RARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIV 386
Query: 91 SRFCK--NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
F K + E + + + K + + YG +I C + A L +EM G
Sbjct: 387 GGFSKAGHAEAADYWFDEAKRIHKTLNASI--YGKIIYAHCQTCNMERAEALVREMEEEG 444
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT---SFSPSLVTYNALIHG 205
+ Y T+++ Y + + DE +KG + + F+P++VTY LI+
Sbjct: 445 IDAPIAIYHTMMDGYTM---------VADE--KKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
+ +ALE+ R M E + + +YS +I+GF ++++ AF +
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV------------ 541
Query: 266 LDQDTNESLVKDLSNHDT--FSSLVNDYCA---EDKAEMALKLRYQAQYLPDSVSYCLLL 320
E +VK+ D ++++++ +C D+A +K + ++ P + ++ ++
Sbjct: 542 -----FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 321 NGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRG 379
+G K R + L +F ++ C +P+ ++ LI + + VE++ + G
Sbjct: 597 HGYAKSGDMRRS--LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 380 L-VNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSV 438
+ NE Y ++ + G+ KA++ + + + G +F+
Sbjct: 655 VSANE-----------------HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 439 LALIKALYCDERYNEMSWVIRNTLRSCNL-NDSEQLKILDEIDPERCIIYALLDVLAEKA 497
AL+KA C + + + + + N+ +S IL + R ++ D++ +
Sbjct: 698 EALLKAC-CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK 756
Query: 498 MDGLLLD 504
+G+ D
Sbjct: 757 KEGVKPD 763
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 119/292 (40%), Gaps = 57/292 (19%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVR-IVELYHQMCVREL------------------ 44
PD + YN +ISA C N + +I V+ + +L H+ R
Sbjct: 552 PDVILYNNIISAFC-GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 45 ----------SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
P T+ +I ++ ++E+AV IL M G+S + +Y++I+ +
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+ GKA E + ++G+ D+ Y L++ C R+ A + +EM R +
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP--YYVTSF-------------------- 192
Y+ L++ + +G+ + L ++ ++G P + TSF
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 193 -----SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
P++ TY LI G P++AL M M + PD+ Y +++
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 21/193 (10%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
D D TY L+ A C++ + + + + +M R + N Y +I + R
Sbjct: 691 DVDIFTYEALLKACCKSGRMQS-------ALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
V EA +++ M ++G+ P +Y+ IS K +M +A + EM G+ P++ Y
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 803
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD----------TLVEAYCLKGEFSKV 172
LI+ +A ++EM G+ P Y ++ EAY +S V
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYI----YSGV 859
Query: 173 FHLQDEVIQKGFL 185
+ E+++ G +
Sbjct: 860 MTICKEMVEAGLI 872
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 26/292 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PDCV Y T+I C + + + + + P+ TT +I
Sbjct: 406 PDCVCYTTMIDGYCNLGRTD-------KAFQYFGALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ +A + R M +GL +Y+ ++ + K ++ K E+ EM GI PDV Y +
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI + + + EA ++ E++ RG P + ++ + +G+F + F
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF---------- 568
Query: 184 FLPYYVTSF--SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
L +Y+ P +VT +AL+HG C QR ++A+ + + + L PD V Y+ +I G+
Sbjct: 569 ILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLV-----KDLSNHDTFSSLV 288
+ ++ KA EL M Q+ P ++ T+ +LV K N +T +S++
Sbjct: 629 CSVGDIEKACELIGLMVQRGML-P-NESTHHALVLGLEGKRFVNSETHASML 678
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 163/389 (41%), Gaps = 44/389 (11%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
+ P+ + I C ++EA +L + G+S + S S +I FCK +GK
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK---VGKPE 358
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
E + + P++ Y + +C +L A +FQE+ G+ P Y T+++ Y
Sbjct: 359 EAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
C G K F +++ G PSL T LI F +A + R M
Sbjct: 419 CNLGRTDKAFQYFGALLKSGN--------PPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 224 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 283
L D V+Y+ ++ G+ + +L K FEL +D+ + + D++ ++
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFEL------------IDEMRSAGISPDVATYNI 518
Query: 284 F--SSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIV 341
S +V Y D+A + + ++P ++++ ++ G K+ F +L++ +
Sbjct: 519 LIHSMVVRGYI--DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD--FQEAFILWFYM 574
Query: 342 AHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 401
A P + C+ L+ G+ + +A + +L +P+
Sbjct: 575 ADLRMKPDVV-------TCS--------ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Query: 402 VYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
+YN LI +C G++ KA ++ M+ G
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 122/293 (41%), Gaps = 29/293 (9%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
++L H +R PN Y + C + A I + + E GL P Y+ +I
Sbjct: 361 IKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
+C KA + +L G P + +LI + +A +F+ M G+
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
TY+ L+ Y + +KVF L DE+ G SP + TYN LIH +
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAG--------ISPDVATYNILIHSMVVRGYI 529
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
DEA EI+ + P ++++ VI GF + + ++AF L M D
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA--------DLRMKP 581
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNG 322
+V T S+L++ YC + E A+ L + A PD V Y L++G
Sbjct: 582 DVV-------TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 146/373 (39%), Gaps = 57/373 (15%)
Query: 86 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL--LE-ARDLFQ 142
+S +I + +++ AL++ ++ GIFP + G+ I LL R+ LE AR+ +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFP---SRGVCISLLKEILRVHGLELAREFVE 260
Query: 143 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 202
ML RG + YC G F K + L + G P +V +
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG--------IRPDIVAFTVF 312
Query: 203 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 262
I LC EA +L + + D VS S+VI GF ++ + +A +L +
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-- 370
Query: 263 CWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLL 319
N +SS +++ C+ +A + ++ LPD V Y +
Sbjct: 371 ----------------PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTM 414
Query: 320 LNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC--------ANNEFKSVV-- 369
++G + A + F + PS ILI C A + F+++
Sbjct: 415 IDGYCNLGRTDKAFQ--YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 370 ----------ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
L+ G+ +N+ D M P+ A YN+LI + G + +A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 420 YDMYKEMLHYGFV 432
++ E++ GFV
Sbjct: 533 NEIISELIRRGFV 545
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 26/292 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PDCV Y T+I C + + + + + P+ TT +I
Sbjct: 406 PDCVCYTTMIDGYCNLGRTD-------KAFQYFGALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ +A + R M +GL +Y+ ++ + K ++ K E+ EM GI PDV Y +
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI + + + EA ++ E++ RG P + ++ + +G+F + F
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF---------- 568
Query: 184 FLPYYVTSF--SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
L +Y+ P +VT +AL+HG C QR ++A+ + + + L PD V Y+ +I G+
Sbjct: 569 ILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLV-----KDLSNHDTFSSLV 288
+ ++ KA EL M Q+ P ++ T+ +LV K N +T +S++
Sbjct: 629 CSVGDIEKACELIGLMVQRGML-P-NESTHHALVLGLEGKRFVNSETHASML 678
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 163/389 (41%), Gaps = 44/389 (11%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
+ P+ + I C ++EA +L + G+S + S S +I FCK +GK
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK---VGKPE 358
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
E + + P++ Y + +C +L A +FQE+ G+ P Y T+++ Y
Sbjct: 359 EAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
C G K F +++ G PSL T LI F +A + R M
Sbjct: 419 CNLGRTDKAFQYFGALLKSGN--------PPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 224 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 283
L D V+Y+ ++ G+ + +L K FEL +D+ + + D++ ++
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFEL------------IDEMRSAGISPDVATYNI 518
Query: 284 F--SSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIV 341
S +V Y D+A + + ++P ++++ ++ G K+ F +L++ +
Sbjct: 519 LIHSMVVRGYI--DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD--FQEAFILWFYM 574
Query: 342 AHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 401
A P + C+ L+ G+ + +A + +L +P+
Sbjct: 575 ADLRMKPDVV-------TCS--------ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Query: 402 VYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
+YN LI +C G++ KA ++ M+ G
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 122/293 (41%), Gaps = 29/293 (9%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
++L H +R PN Y + C + A I + + E GL P Y+ +I
Sbjct: 361 IKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
+C KA + +L G P + +LI + +A +F+ M G+
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
TY+ L+ Y + +KVF L DE+ G SP + TYN LIH +
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAG--------ISPDVATYNILIHSMVVRGYI 529
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
DEA EI+ + P ++++ VI GF + + ++AF L M D
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA--------DLRMKP 581
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNG 322
+V T S+L++ YC + E A+ L + A PD V Y L++G
Sbjct: 582 DVV-------TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 146/373 (39%), Gaps = 57/373 (15%)
Query: 86 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL--LE-ARDLFQ 142
+S +I + +++ AL++ ++ GIFP + G+ I LL R+ LE AR+ +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFP---SRGVCISLLKEILRVHGLELAREFVE 260
Query: 143 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 202
ML RG + YC G F K + L + G P +V +
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG--------IRPDIVAFTVF 312
Query: 203 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 262
I LC EA +L + + D VS S+VI GF ++ + +A +L +
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-- 370
Query: 263 CWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLL 319
N +SS +++ C+ +A + ++ LPD V Y +
Sbjct: 371 ----------------PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTM 414
Query: 320 LNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC--------ANNEFKSVV-- 369
++G + A + F + PS ILI C A + F+++
Sbjct: 415 IDGYCNLGRTDKAFQ--YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 370 ----------ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
L+ G+ +N+ D M P+ A YN+LI + G + +A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 420 YDMYKEMLHYGFV 432
++ E++ GFV
Sbjct: 533 NEIISELIRRGFV 545
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 178/437 (40%), Gaps = 78/437 (17%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
+Y +M + +SPN TY +I+ C R+ EA G+ + ++G+ P +YS +I FC
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLL-------------------------- 128
K + + +M+ G PDV YG+L+ L
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 129 ---------CHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
C R EA +F+ M + G+ P T+ T++ ++ F K H++ +
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK--HMKPTI 555
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
+ F S + N +IH L R ++A + + E ++PD V+Y+ +I
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 240 GF---RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK 296
G+ RR+ E + FEL K T P +T T + L++ C +
Sbjct: 616 GYCSLRRLDEAERIFEL-----LKVT--PFGPNTV-----------TLTILIHVLCKNND 657
Query: 297 AEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIY 353
+ A+++ + P++V+Y L++ K + + LF + PS + Y
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK--LFEEMQEKGISPSIVSY 715
Query: 354 DILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG 413
I+I+ G RG V+EA + P+ Y +LI +C
Sbjct: 716 SIIID---------------GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 760
Query: 414 GNVHKAYDMYKEMLHYG 430
G + +A +Y+ ML G
Sbjct: 761 GRLVEAALLYEHMLRNG 777
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 23/259 (8%)
Query: 45 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
+PN T+ +I FC R ++ A + ++M ++G+ P +YS +I + K +G +
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 105 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
+ + L KG+ DV + I + L A +++ ML +G+SP TY L++ C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 165 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
G + F + +++++G PS+VTY++LI G C + M +
Sbjct: 403 QDGRIYEAFGMYGQILKRG--------MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 225 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTF 284
M PD V Y ++ G + + A ++M L Q ++V F
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM--------LGQSIRLNVV-------VF 499
Query: 285 SSLVNDYCAEDKAEMALKL 303
+SL++ +C ++ + ALK+
Sbjct: 500 NSLIDGWCRLNRFDEALKV 518
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 7/184 (3%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VTYNT+I C + RI EL V PN T +I + C N
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAE----RIFELLK---VTPFGPNTVTLTILIHVLCKNN 656
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ A+ + +MAEKG P+A +Y ++ F K+ ++ + ++ EM +KGI P + +Y
Sbjct: 657 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++I LC + R+ EA ++F + + + P Y L+ YC G + L + +++
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Query: 183 GFLP 186
G P
Sbjct: 777 GVKP 780
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
+ ++ + ++ P+ TY MI +C R++EA I L+ P+ + + +I
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
CKN +M A+ M M +KG P+ YG L+ + + LF+EM +G+SP
Sbjct: 653 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 712
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
+Y +++ C +G + ++ + I L P +V Y LI G C R
Sbjct: 713 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL--------PDVVAYAILIRGYCKVGRLV 764
Query: 214 EALEILRGMPEMLLDPDEV 232
EA + M + PD++
Sbjct: 765 EAALLYEHMLRNGVKPDDL 783
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 145/346 (41%), Gaps = 53/346 (15%)
Query: 94 CKNKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
C+ + KALE+ V G+ P Y +L L+ R L A D F ++ G+ P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA-DHFDKLCRGGIEPS 215
Query: 153 G-RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 211
G + +++A KGE +K V+++G F +V+ N ++ GL Q
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERG--------FRVGIVSCNKVLKGLSVDQ- 266
Query: 212 PDEALEILRGMPEMLLD----PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 267
+E+ + ++LD P+ V++ +I+GF + E+ +AF+L M+Q+
Sbjct: 267 ----IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR------- 315
Query: 268 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK-- 325
+ DL +S+L++ Y M KL QA LHK
Sbjct: 316 -----GIEPDLI---AYSTLIDGYFKAGMLGMGHKLFSQA---------------LHKGV 352
Query: 326 KATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 385
K + + Y+ + L S + +L + + N + L+KG G + EA
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI-LIKGLCQDGRIYEAF 411
Query: 386 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
+L R P Y+ LI C GN+ + +Y++M+ G+
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 21/277 (7%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P+ TY +I+ + ++EA + R M E G+ P +Y+ +IS KN + + L++
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA-RDLFQEMLLRGMSPGGRTYDTLVEAYC 164
EML G+ PD+ +Y L+ R EA + L +++ L G+ PG TY+ L++A C
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC 165
Query: 165 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
G D I+ + + P L+TYN LI+GLC +R ++R + +
Sbjct: 166 KSGH-------TDNAIE--LFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 225 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTF 284
P+ V+Y+ ++ + + + + K +L L+M K+ + D N ++V
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM--KKEGYTFDGFANCAVV--------- 265
Query: 285 SSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLN 321
S+L+ AE+ E +L D VSY LLN
Sbjct: 266 SALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P TYN L+ A C++ N +EL+ + R + P TY +I C R
Sbjct: 152 PGIDTYNILLDALCKSGHTDN-------AIELFKHLKSR-VKPELMTYNILINGLCKSRR 203
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V ++R + + G +P+A +Y+ ++ + K K + K L++ ++M +G D A
Sbjct: 204 VGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCA 263
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGM-SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++ L R EA + E++ G S +Y+TL+ Y G V L +E+ K
Sbjct: 264 VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK 323
Query: 183 GFLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEA 215
G P T PS+VT N LI GLC D A
Sbjct: 324 GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRA 383
Query: 216 LEILRGMPEMLLDPDEVSYSAVI 238
+ + M DE +Y++V+
Sbjct: 384 MRLFASMEV----RDEFTYTSVV 402
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 55/365 (15%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD TYN+LIS A KN L+ R+++L+ +M LSP+ +Y ++ +
Sbjct: 80 EPDVTTYNSLISGAA---KNLMLN----RVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 132
Query: 63 RVEEAVGILRL-MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
R EA IL + GL P D+Y+ ++ CK+ A+E+ + L + P++ Y
Sbjct: 133 RHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIEL-FKHLKSRVKPELMTY 191
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL-----Q 176
+LI LC RR+ + +E+ G +P TY T+++ Y K L +
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 177 DEVIQKGFLPYYVTSF-----------------------SPSLVTYNALIHGLCFFQRPD 213
+ GF V S S +V+YN L++ L F
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN-LYFKDGNL 310
Query: 214 EALEILRGMPEML-LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
+A++ L EM L PD+ +++ +++G I A +K +
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGA--------EKHLACIGEMGMQP 362
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
S+V T + L++ C + A++L + + + D +Y +++ L K A
Sbjct: 363 SVV-------TCNCLIDGLCKAGHVDRAMRL-FASMEVRDEFTYTSVVHNLCKDGRLVCA 414
Query: 333 TRLLL 337
++LLL
Sbjct: 415 SKLLL 419
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 129/320 (40%), Gaps = 46/320 (14%)
Query: 194 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
P ++TYN LI G F DEA + R M E ++PD +Y+++ISG + L + +L
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 254 KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ----AQY 309
D+ + L D+ +++T S Y + A K+ ++ A
Sbjct: 106 ------------FDEMLHSGLSPDMWSYNTLMSC---YFKLGRHGEAFKILHEDIHLAGL 150
Query: 310 LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSV 368
+P +Y +LL+ L K + A L P + Y+ILI C + SV
Sbjct: 151 VPGIDTYNILLDALCKSGHTDNAIELFKHL---KSRVKPELMTYNILINGLCKSRRVGSV 207
Query: 369 VELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLH 428
+++ + G Y P Y ++ + + K ++ +M
Sbjct: 208 DWMMRELKKSG----------------YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 429 YGFVCHMFS----VLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQLKILDEIDPERC 484
G+ F+ V ALIK +E Y M ++R+ RS ++ L L D
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN-- 309
Query: 485 IIYALLDVLAEKAMDGLLLD 504
+ A+ D+L E M GL D
Sbjct: 310 -LDAVDDLLEEIEMKGLKPD 328
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 16/260 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TYNTLIS C+ + + + +M ++PN TY I F R
Sbjct: 236 PDIFTYNTLISVYCKKSM-------HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGR 288
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ EA + R + + + H +Y+ +I +C+ ++ +AL ++ M +G P V Y
Sbjct: 289 MREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNS 347
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+++ LC R+ EA L EM + + P T +TL+ AYC + ++ ++I+ G
Sbjct: 348 ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG 407
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ +Y ALIHG C + A E L M E P +YS ++ GF
Sbjct: 408 L--------KLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYN 459
Query: 244 IRELRKAFELKLEMDQKETC 263
+ + +L E +++ C
Sbjct: 460 QNKQDEITKLLEEFEKRGLC 479
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 143/308 (46%), Gaps = 27/308 (8%)
Query: 32 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 91
+ +++ +M + N Y ++ E+A +L M EKG+ P +Y+ +IS
Sbjct: 187 VWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLIS 246
Query: 92 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 151
+CK +AL ++ M G+ P++ Y I + R+ EA LF+E + ++
Sbjct: 247 VYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTA 305
Query: 152 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 211
TY TL++ YC + + L++ + +G FSP +VTYN+++ LC R
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRG--------FSPGVVTYNSILRKLCEDGR 357
Query: 212 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 271
EA +L M ++PD ++ + +I+ + +I ++ A ++K +M E+ LD
Sbjct: 358 IREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM--IESGLKLDM--- 412
Query: 272 ESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKAT 328
++ +L++ +C + A+ L + + P +Y L++G + +
Sbjct: 413 ----------YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNK 462
Query: 329 SRFATRLL 336
T+LL
Sbjct: 463 QDEITKLL 470
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 118/247 (47%), Gaps = 15/247 (6%)
Query: 7 VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEE 66
VTY TLI C N +R+ E+ M R SP TY ++R C+ R+ E
Sbjct: 308 VTYTTLIDGYCRM----NDIDEALRLREV---MESRGFSPGVVTYNSILRKLCEDGRIRE 360
Query: 67 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 126
A +L M+ K + P + + +I+ +CK ++M A+++K +M++ G+ D+++Y LI
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 127 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
C L A++ M+ +G SPG TY LV+ + + + ++ L +E ++G
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRG--- 477
Query: 187 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 246
+ Y LI +C ++ D A + M + L D V ++ + + R +
Sbjct: 478 -----LCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 247 LRKAFEL 253
+ +A L
Sbjct: 533 VTEASAL 539
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 167/393 (42%), Gaps = 51/393 (12%)
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ +++ + + GL PH + + +++ K + ++ +M+ G+ ++H Y +
Sbjct: 149 INDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNV 208
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ +A L EM +G+ P TY+TL+ YC K + +QD + + G
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+P++VTYN+ IHG R EA + R + + + + V+Y+ +I G+ R
Sbjct: 269 V--------APNIVTYNSFIHGFSREGRMREATRLFREIKDDV-TANHVTYTTLIDGYCR 319
Query: 244 IRELRKAFELKLEMDQK--------------ETCWPLDQDTNESLVKDLSNHD------T 283
+ ++ +A L+ M+ + + C L+ ++S T
Sbjct: 320 MNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNIT 379
Query: 284 FSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYI 340
++L+N YC + A+K++ ++ D SY L++G K A + LF +
Sbjct: 380 CNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA-KEELFSM 438
Query: 341 VAHCLTIPSYIIYDILIEKCAN-NEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 399
+ + P Y Y L++ N N+ + +L++ F RGL + A
Sbjct: 439 IEKGFS-PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA-------------- 483
Query: 400 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
+Y LI C V A +++ M G V
Sbjct: 484 --LYRGLIRRICKLEQVDYAKVLFESMEKKGLV 514
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD +T NTLI+A C+ E V V++ +M L + +Y+ +I FC
Sbjct: 374 EPDNITCNTLINAYCKIE-------DMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVL 426
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+E A L M EKG SP +YS ++ F + + ++ E +G+ DV Y
Sbjct: 427 ELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYR 486
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 177
LI+ +C ++ A+ LF+ M +G+ + T+ AY G+ ++ L D
Sbjct: 487 GLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFD 541
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 176/396 (44%), Gaps = 46/396 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P +T+N+L+S + + + + Y ++P+ T+ +I FC +
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYG------VTPDSYTFNTLINGFCKNSM 224
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG--IFPDVHAY 121
V+EA I + M +P +Y+ II C+ ++ A + ML K + P+V +Y
Sbjct: 225 VDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSY 284
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
L++ C ++ + EA +F +ML RG+ P TY+TL++ + ++ +++
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEI----KDILI 340
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
G + T+F+P T+N LI C D A+++ + M M L PD SYS +I
Sbjct: 341 GGNDAF--TTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 242 RRIRELRKAFELKLEMDQKET------CWPLDQDTN--------------------ESLV 275
E +A L E+ +KE C PL N + +
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Query: 276 KDLSNHDTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
+ + + ++ +L+ +C E K + A L L + +++PD +Y LL++GL K + A
Sbjct: 459 RGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLA 518
Query: 333 TRLLLFYIVAHCLTIPSY---IIYDILIEKCANNEF 365
L + + L + + ++ ++ K AN F
Sbjct: 519 HDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESF 554
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 185/435 (42%), Gaps = 49/435 (11%)
Query: 21 KNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLS 80
+N N++ ++ +E CV+ + + +IR + + +E+V + + M + G+S
Sbjct: 114 RNLNVARNFLFSIERRSNGCVK---LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGIS 170
Query: 81 PHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARD 139
P +++ ++S K G A ++ EM G+ PD + + LI C + EA
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFR 230
Query: 140 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 199
+F++M L +P TY+T+++ C G+ ++ +++K T P++V+Y
Sbjct: 231 IFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA------TDVHPNVVSY 284
Query: 200 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 259
L+ G C Q DEA+ + M L P+ V+Y+ +I G + E + E+K
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG---LSEAHRYDEIK----- 336
Query: 260 KETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSY 316
+ N++ + TF+ L+ +C + A+K+ + + PDS SY
Sbjct: 337 -----DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 317 CLLLNGL-----HKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVE 370
+L+ L +A + F ++ P Y+ + E CAN + K +
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 371 LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
+ + RG+ + + Y LI HC G AY++ ML
Sbjct: 452 VFRQLMKRGVQDPPS-----------------YKTLITGHCREGKFKPAYELLVLMLRRE 494
Query: 431 FVCHMFSVLALIKAL 445
FV + + LI L
Sbjct: 495 FVPDLETYELLIDGL 509
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 29/330 (8%)
Query: 3 DPDCVTYNTLISAACEAEK---NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFC 59
+PD VTYNT+I C A K HN+ ++ H PN +Y ++R +C
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVH--------PNVVSYTTLVRGYC 292
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD--KGIFPD 117
+ ++EAV + M +GL P+A +Y+ +I + + ++ + D PD
Sbjct: 293 MKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPD 352
Query: 118 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 177
+ +LI+ C L A +FQEML + P +Y L+ C++ EF + L +
Sbjct: 353 ACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFN 412
Query: 178 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG-MPEMLLDPDEVSYSA 236
E+ +K L P YN + LC + +A ++ R M + DP SY
Sbjct: 413 ELFEKEVL-LGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP--SYKT 469
Query: 237 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK 296
+I+G R + + A+EL + M ++E + D +T E L+ D + A D
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRRE--FVPDLETYELLI------DGLLKIGEALLAHDT 521
Query: 297 AEMALKLRYQAQYLPDSVSYCLLLNGLHKK 326
+ L+ + YLP + ++ +L L K+
Sbjct: 522 LQRMLR----SSYLPVATTFHSVLAELAKR 547
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 18/259 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VT NT++ C ++H L++ V + M + N TY +I C +
Sbjct: 439 PNVVTVNTIVGGMC---RHHGLNMAVV----FFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP-DVHAYG 122
VE+A+ M E G SP A Y +IS C+ + A+ + VE L +G F D+ AY
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV-VEKLKEGGFSLDLLAYN 550
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LI L C + + ++ +M G P TY+TL+ + +F V + +++ +
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP-EMLLDPDEVSYSAVISGF 241
G P++ TY A+I C DEAL++ + M ++P+ V Y+ +I+ F
Sbjct: 611 G--------LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAF 662
Query: 242 RRIRELRKAFELKLEMDQK 260
++ +A LK EM K
Sbjct: 663 SKLGNFGQALSLKEEMKMK 681
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 158/362 (43%), Gaps = 36/362 (9%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D + +NTLI C+ + VR+ + CV PN TY C+I +C ++
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMK--LEERCV----PNAVTYNCLIDGYCRAGKL 422
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
E A ++ M E + P+ + + I+ C++ + A+ ++M +G+ +V Y L
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I C + +A +++ML G SP + Y L+ C + +++ + G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG- 541
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
FS L+ YN LI C ++ E+L M + PD ++Y+ +IS F +
Sbjct: 542 -------FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL- 303
++ ++ E +E +++ P T+ ++++ YC+ + + ALKL
Sbjct: 595 KDF-ESVERMMEQMREDGLDP--------------TVTTYGAVIDAYCSVGELDEALKLF 639
Query: 304 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
++ P++V Y +L+N K F L L + + P+ Y+ L KC
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSK--LGNFGQALSLKEEMKMKMVRPNVETYNALF-KC 696
Query: 361 AN 362
N
Sbjct: 697 LN 698
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 186/459 (40%), Gaps = 85/459 (18%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
+I+ L + +SPN I C R A IL + + A ++ ++
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
S +N ++ + ++ ++M + I PDV G+LI LC RR+ EA ++F++M +
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD 361
Query: 151 PGGRT------YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 204
G ++TL++ C G + +E++ + L P+ VTYN LI
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEA----EELLVRMKLEERCV---PNAVTYNCLID 414
Query: 205 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 264
G C + + A E++ M E + P+ V+ + ++ G R L A ++M+++
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG--- 471
Query: 265 PLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL---KLRYQAQYLPDSVSYCLLLN 321
VK N T+ +L++ C+ E A+ + +A PD+ Y L++
Sbjct: 472 ----------VK--GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 322 GL-------------HKKATSRFATRLLLFYI-------------VAHCLT-------IP 348
GL K F+ LL + + V LT P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 349 SYIIYDILIEKCA-NNEFKSVVELVKGFRMRGL-------------------VNEAARA- 387
I Y+ LI + +F+SV +++ R GL ++EA +
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 388 RDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
+D LH P +YN+LI GN +A + +EM
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 8/178 (4%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D + YN LI C+ ++ E+ M P+ TY +I F
Sbjct: 545 DLLAYNMLIGLFCDKNNAE-------KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM-LDKGIFPDVHAYGL 123
E ++ M E GL P +Y +I +C E+ +AL++ +M L + P+ Y +
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
LI +A L +EM ++ + P TY+ L + K + + L DE+++
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +TYNTLIS + + + + + QM L P TTY +I +C
Sbjct: 579 PDSITYNTLISFFGKHKD-------FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 64 VEEAVGILRLMA-EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++EA+ + + M ++P+ Y+ +I+ F K G+AL +K EM K + P+V Y
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 123 LLIQLLCHQRRLLEARDLFQEML 145
L + L + + L EM+
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMV 714
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 18/259 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VT NT++ C ++H L++ V + M + N TY +I C +
Sbjct: 439 PNVVTVNTIVGGMC---RHHGLNMAVV----FFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP-DVHAYG 122
VE+A+ M E G SP A Y +IS C+ + A+ + VE L +G F D+ AY
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV-VEKLKEGGFSLDLLAYN 550
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LI L C + + ++ +M G P TY+TL+ + +F V + +++ +
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP-EMLLDPDEVSYSAVISGF 241
G P++ TY A+I C DEAL++ + M ++P+ V Y+ +I+ F
Sbjct: 611 G--------LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAF 662
Query: 242 RRIRELRKAFELKLEMDQK 260
++ +A LK EM K
Sbjct: 663 SKLGNFGQALSLKEEMKMK 681
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 159/363 (43%), Gaps = 38/363 (10%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVREL-SPNETTYRCMIRLFCDRNR 63
D + +NTLI C+ + EL +M + E +PN TY C+I +C +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAE-------ELLVRMKLEERCAPNAVTYNCLIDGYCRAGK 421
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E A ++ M E + P+ + + I+ C++ + A+ ++M +G+ +V Y
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C + +A +++ML G SP + Y L+ C + +++ + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
FS L+ YN LI C ++ E+L M + PD ++Y+ +IS F +
Sbjct: 542 --------FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
++ ++ E +E +++ P T+ ++++ YC+ + + ALKL
Sbjct: 594 HKDF-ESVERMMEQMREDGLDP--------------TVTTYGAVIDAYCSVGELDEALKL 638
Query: 304 ----RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
++ P++V Y +L+N K F L L + + P+ Y+ L K
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSK--LGNFGQALSLKEEMKMKMVRPNVETYNALF-K 695
Query: 360 CAN 362
C N
Sbjct: 696 CLN 698
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 187/459 (40%), Gaps = 85/459 (18%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
+I+ L + +SPN I C R A IL + + A ++ ++
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALL 301
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
S +N ++ + ++ ++M + I PDV G+LI LC RR+ EA ++F++M +
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTD 361
Query: 151 PGGRT------YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 204
G ++TL++ C G + +E++ + L +P+ VTYN LI
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEA----EELLVRMKLEERC---APNAVTYNCLID 414
Query: 205 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 264
G C + + A E++ M E + P+ V+ + ++ G R L A ++M+++
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG--- 471
Query: 265 PLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL---KLRYQAQYLPDSVSYCLLLN 321
VK N T+ +L++ C+ E A+ + +A PD+ Y L++
Sbjct: 472 ----------VK--GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 322 GL-------------HKKATSRFATRLLLFYI-------------VAHCLT-------IP 348
GL K F+ LL + + V LT P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP 579
Query: 349 SYIIYDILIEKCA-NNEFKSVVELVKGFRMRGL-------------------VNEAARA- 387
I Y+ LI + +F+SV +++ R GL ++EA +
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 388 RDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
+D LH P +YN+LI GN +A + +EM
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 43/223 (19%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD Y LIS C+ ++H+ +R+VE + S + Y +I LFCD+N
Sbjct: 509 PDAKIYYALISGLCQVRRDHD----AIRVVEKLKEGG---FSLDLLAYNMLIGLFCDKNN 561
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E+ +L M ++G P + +Y+ +IS F K+K+ M +M + G+ P V YG
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRG-MSPGGRTYDTLVEAYCLKGEFSKVFHLQ------ 176
+I C L EA LF++M L ++P Y+ L+ A+ G F + L+
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 177 -----------------------------DEVIQKGFLPYYVT 190
DE++++ P +T
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +TYNTLIS + + + + + QM L P TTY +I +C
Sbjct: 579 PDSITYNTLISFFGKHKD-------FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 64 VEEAVGILRLMA-EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++EA+ + + M ++P+ Y+ +I+ F K G+AL +K EM K + P+V Y
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
L + L + + L EM+ + P T + L+E E K+
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 18/259 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VT NT++ C ++H L++ V + M + N TY +I C +
Sbjct: 439 PNVVTVNTIVGGMC---RHHGLNMAVV----FFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP-DVHAYG 122
VE+A+ M E G SP A Y +IS C+ + A+ + VE L +G F D+ AY
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV-VEKLKEGGFSLDLLAYN 550
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LI L C + + ++ +M G P TY+TL+ + +F V + +++ +
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP-EMLLDPDEVSYSAVISGF 241
G P++ TY A+I C DEAL++ + M ++P+ V Y+ +I+ F
Sbjct: 611 G--------LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAF 662
Query: 242 RRIRELRKAFELKLEMDQK 260
++ +A LK EM K
Sbjct: 663 SKLGNFGQALSLKEEMKMK 681
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 158/362 (43%), Gaps = 36/362 (9%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D + +NTLI C+ + VR+ + CV PN TY C+I +C ++
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMK--LEERCV----PNAVTYNCLIDGYCRAGKL 422
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
E A ++ M E + P+ + + I+ C++ + A+ ++M +G+ +V Y L
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I C + +A +++ML G SP + Y L+ C + +++ + G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG- 541
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
FS L+ YN LI C ++ E+L M + PD ++Y+ +IS F +
Sbjct: 542 -------FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL- 303
++ ++ E +E +++ P T+ ++++ YC+ + + ALKL
Sbjct: 595 KDF-ESVERMMEQMREDGLDP--------------TVTTYGAVIDAYCSVGELDEALKLF 639
Query: 304 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
++ P++V Y +L+N K F L L + + P+ Y+ L KC
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSK--LGNFGQALSLKEEMKMKMVRPNVETYNALF-KC 696
Query: 361 AN 362
N
Sbjct: 697 LN 698
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 186/459 (40%), Gaps = 85/459 (18%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
+I+ L + +SPN I C R A IL + + A ++ ++
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
S +N ++ + ++ ++M + I PDV G+LI LC RR+ EA ++F++M +
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD 361
Query: 151 PGGRT------YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 204
G ++TL++ C G + +E++ + L P+ VTYN LI
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEA----EELLVRMKLEERCV---PNAVTYNCLID 414
Query: 205 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 264
G C + + A E++ M E + P+ V+ + ++ G R L A ++M+++
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG--- 471
Query: 265 PLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL---KLRYQAQYLPDSVSYCLLLN 321
VK N T+ +L++ C+ E A+ + +A PD+ Y L++
Sbjct: 472 ----------VK--GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 322 GL-------------HKKATSRFATRLLLFYI-------------VAHCLT-------IP 348
GL K F+ LL + + V LT P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 349 SYIIYDILIEKCA-NNEFKSVVELVKGFRMRGL-------------------VNEAARA- 387
I Y+ LI + +F+SV +++ R GL ++EA +
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 388 RDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
+D LH P +YN+LI GN +A + +EM
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 43/223 (19%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD Y LIS C+ ++H+ +R+VE + S + Y +I LFCD+N
Sbjct: 509 PDAKIYYALISGLCQVRRDHD----AIRVVEKLKEGG---FSLDLLAYNMLIGLFCDKNN 561
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E+ +L M ++G P + +Y+ +IS F K+K+ M +M + G+ P V YG
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRG-MSPGGRTYDTLVEAYCLKGEFSKVFHLQ------ 176
+I C L EA LF++M L ++P Y+ L+ A+ G F + L+
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 177 -----------------------------DEVIQKGFLPYYVT 190
DE++++ P +T
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +TYNTLIS + + + + + QM L P TTY +I +C
Sbjct: 579 PDSITYNTLISFFGKHKD-------FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 64 VEEAVGILRLMA-EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++EA+ + + M ++P+ Y+ +I+ F K G+AL +K EM K + P+V Y
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
L + L + + L EM+ + P T + L+E E K+
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 12/235 (5%)
Query: 29 YVRIVELYHQMCVRELSP--NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 86
+V ++L +M P TT+ +++ C+ R +A L +A +G H +
Sbjct: 525 FVGALDLLKKMRFYGFEPWIKHTTF--LVKKLCENGRAVDACKYLDDVAGEGFLGHMVAS 582
Query: 87 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 146
+ I KN+ + + LE+ ++ G PDV AY +LI+ LC R +EA LF EM+
Sbjct: 583 TAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVS 642
Query: 147 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 206
+G+ P TY+++++ +C +GE + + Y +P ++TY +LIHGL
Sbjct: 643 KGLKPTVATYNSMIDGWCKEGEIDRGLSC--------IVRMYEDEKNPDVITYTSLIHGL 694
Query: 207 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 261
C RP EA+ M P+ +++ A+I G + +A EM++KE
Sbjct: 695 CASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKE 749
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 164/398 (41%), Gaps = 55/398 (13%)
Query: 42 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 101
+ + P+ + +I N+V+ AV +L + + GL P Y+ II CK +
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 102 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
+L++ EM D G+ P + L + + A DL ++M G P + LV+
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVK 552
Query: 162 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 221
C G D+V +GFL + V S A I GL + D LE+ R
Sbjct: 553 KLCENGRAVDACKYLDDVAGEGFLGHMVAS--------TAAIDGLIKNEGVDRGLELFRD 604
Query: 222 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT--NESLVKDLS 279
+ PD ++Y + I+ L KA C ++ D NE + K L
Sbjct: 605 ICANGHCPDVIAYHVL------IKALCKA------------CRTMEADILFNEMVSKGLK 646
Query: 280 -NHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRL 335
T++S+++ +C E + + L Y+ + PD ++Y L++GL A+ R
Sbjct: 647 PTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC--ASGR----- 699
Query: 336 LLFYIVAHCLTIPSYIIY---DILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 392
PS I+ ++ + C N + + L++G G EA M
Sbjct: 700 ------------PSEAIFRWNEMKGKDCYPNRI-TFMALIQGLCKCGWSGEALVYFREME 746
Query: 393 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
+ P+ AVY L+ N++ + +++EM+H G
Sbjct: 747 EKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 192/465 (41%), Gaps = 65/465 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ TYN L+ A ++ + ++ + R+ E+ + C ++ T +++++C+ +
Sbjct: 175 PNAYTYNCLLEAISKSNSS-SVELVEARLKEM--RDCGFHF--DKFTLTPVLQVYCNTGK 229
Query: 64 VEEAVGILRLMAEKG-LSPHADSYSRIISRFCKNKEMGKALEMKVEML-DKGIFPDVHAY 121
E A+ + + +G L H + ++ FCK ++ KA E+ +EML ++ I + Y
Sbjct: 230 SERALSVFNEILSRGWLDEHISTI--LVVSFCKWGQVDKAFEL-IEMLEERDIRLNYKTY 286
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+LI + R+ +A LF++M GM+ YD L+ C + L E+ +
Sbjct: 287 CVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKR 346
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS----YSAV 237
G P L LC F E E+ R ++ D D+ S Y ++
Sbjct: 347 SGIPP-----------DRGILGKLLCSFS---EESELSRITEVIIGDIDKKSVMLLYKSL 392
Query: 238 ISGFRRIRELRKAFEL------KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDY 291
GF R + +A+ E D L +D N++++ D D+ S ++N
Sbjct: 393 FEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPD---SDSLSIVINCL 449
Query: 292 CAEDKAEMALKLRY---QAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIP 348
+K +MA+ L + Q +P + Y ++ G+ K+ S + +LL + P
Sbjct: 450 VKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL--GEMKDAGVEP 507
Query: 349 SYI----IYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYN 404
S IY L E+C +F ++L+K R G + P
Sbjct: 508 SQFTLNCIYGCLAERC---DFVGALDLLKKMRFYG----------------FEPWIKHTT 548
Query: 405 LLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDE 449
L+ C G A ++ GF+ HM + A I L +E
Sbjct: 549 FLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNE 593
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD + Y+ LI A C+A + I L+++M + L P TY MI +C
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADI-------LFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ + + M E +P +Y+ +I C + +A+ EM K +P+ +
Sbjct: 665 IDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMA 724
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LIQ LC EA F+EM + M P Y +LV ++ + F + E++ KG
Sbjct: 725 LIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Query: 184 FLPYYV 189
P V
Sbjct: 785 RFPVSV 790
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 191/447 (42%), Gaps = 65/447 (14%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
R ++Y +M N T+ +I FC +++ EA+ + M + G+ P+ S++ +I
Sbjct: 201 RFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMI 260
Query: 91 SRFCKNKEMGKALEM--KVEMLDKG-IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 147
CK +M AL++ K+ M+ + P+ Y +I C RL A + +M+
Sbjct: 261 DGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKS 320
Query: 148 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 207
G+ RTY LV+AY G + L DE+ KG + + V YN++++ L
Sbjct: 321 GVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLV--------VNTVIYNSIVYWLF 372
Query: 208 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL- 266
+ A+ +LR M + D + + V+ G R +++A E + ++ +K+ +
Sbjct: 373 MEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIV 432
Query: 267 ------------------DQDTNESLVKDLS-NHDTFSSLVNDYCAEDKAEMALKL---R 304
DQ LV+ LS + +F +L++ Y E K E AL++
Sbjct: 433 CHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGM 492
Query: 305 YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNE 364
+ + V Y ++NGL K+ + A V + + I + Y+ L+ N
Sbjct: 493 IKMNKTSNLVIYNSIVNGLSKRGMAGAAE------AVVNAMEIKDIVTYNTLL----NES 542
Query: 365 FKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEG------AVYNLLIFDHCIGGNVHK 418
K+ G V EA D +L + + +G +N++I C G+ K
Sbjct: 543 LKT-----------GNVEEA----DDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEK 587
Query: 419 AYDMYKEMLHYGFVCHMFSVLALIKAL 445
A ++ K M+ G V + LI +
Sbjct: 588 AKEVLKFMVERGVVPDSITYGTLITSF 614
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 156/353 (44%), Gaps = 56/353 (15%)
Query: 4 PDCVTYNTLISAACEA---------------------EKNHN-LSIPYVRI------VEL 35
P+ VTYN++I+ C+A E+ + L Y R + L
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
+M + L N Y ++ +E A+ +LR M K + + + ++ C+
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR 408
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
N + +A+E + ++ +K + D+ + L+ ++L A + ML++G+S +
Sbjct: 409 NGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 215
+ TL++ Y +G+ + + D +I+ + + +LV YN++++GL A
Sbjct: 469 FGTLIDGYLKEGKLERALEIYDGMIK--------MNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
++ M D V+Y+ +++ + + +A ++ +M ++ D + + SLV
Sbjct: 521 EAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQ------DGEKSVSLV 570
Query: 276 KDLSNHDTFSSLVNDYC---AEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 325
TF+ ++N C + +KA+ LK + +PDS++Y L+ K
Sbjct: 571 -------TFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSK 616
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 174/443 (39%), Gaps = 45/443 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V++N +I AC K ++ ++++ M +SPN TY +I FC R
Sbjct: 251 PNVVSFNMMIDGAC---KTGDMRFA-LQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGR 306
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A I M + G+ + +Y ++ + + +AL + EM KG+ + Y
Sbjct: 307 LDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNS 366
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ L + + A + ++M + M T +V C G + Q ++ +K
Sbjct: 367 IVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKK 426
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ +V +N L+H ++ A +IL M L D +S+ +I G+ +
Sbjct: 427 LV--------EDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLK 478
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+L +A E+ M + + SN ++S+VN A A +
Sbjct: 479 EGKLERALEIYDGMIK---------------MNKTSNLVIYNSIVNGLSKRGMAGAAEAV 523
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CAN 362
A + D V+Y LLN K A +L S + ++I+I C
Sbjct: 524 -VNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKF 582
Query: 363 NEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDM 422
++ E++K RG+V P+ Y LI + K ++
Sbjct: 583 GSYEKAKEVLKFMVERGVV----------------PDSITYGTLITSFSKHRSQEKVVEL 626
Query: 423 YKEMLHYGFVCHMFSVLALIKAL 445
+ ++ G H L++++ L
Sbjct: 627 HDYLILQGVTPHEHIYLSIVRPL 649
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 38 QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 97
QM V L + +Y +I C R+E A L M ++G+SP+ +++ +S +
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Query: 98 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 157
++ K + ++L G PDV + L+I LC + + +A D F+EML G+ P TY+
Sbjct: 475 DVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYN 534
Query: 158 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 217
L+ + C G+ + L ++ + G SP L YNA I C ++ +A E
Sbjct: 535 ILIRSCCSTGDTDRSVKLFAKMKENG--------LSPDLYAYNATIQSFCKMRKVKKAEE 586
Query: 218 ILRGMPEMLLDPDEVSYSAVISGFR---RIRELRKAF 251
+L+ M + L PD +YS +I R E R+ F
Sbjct: 587 LLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMF 623
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 7/183 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VT+NT +S +++ ++ + ++ V P+ T+ +I C
Sbjct: 458 PNLVTFNTFLSG-------YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKE 510
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+++A + M E G+ P+ +Y+ +I C + +++++ +M + G+ PD++AY
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
IQ C R++ +A +L + ML G+ P TY TL++A G S+ + + + G
Sbjct: 571 TIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Query: 184 FLP 186
+P
Sbjct: 631 CVP 633
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +T++ +I+ C A++ + + + +M + PNE TY +IR C
Sbjct: 493 PDVITFSLIINCLCRAKEIKD-------AFDCFKEMLEWGIEPNEITYNILIRSCCSTGD 545
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ +V + M E GLSP +Y+ I FCK +++ KA E+ ML G+ PD Y
Sbjct: 546 TDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYST 605
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
LI+ L R EAR++F + G P T
Sbjct: 606 LIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 112/515 (21%), Positives = 198/515 (38%), Gaps = 85/515 (16%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P YN +I A K+++L + Y++ ++ C P+ TY +I C +
Sbjct: 178 PSTRLYNAVIDALV---KSNSLDLAYLKFQQMRSDGC----KPDRFTYNILIHGVCKKGV 230
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE----MKVEMLDK------- 112
V+EA+ +++ M ++G P+ +Y+ +I F + +AL+ M+V L+
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 113 ---GIF---PDVHAYGLLIQL------------------LCHQRRLLEARDLFQEMLLRG 148
GIF P A+ +L+ L + E +++ RG
Sbjct: 291 FVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
P T++ + + + + D + +G P F+ LV AL++
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKP----GFNGYLVLVQALLNA--- 403
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 268
QR E L+ M L SY+AVI + R + A EM D+
Sbjct: 404 -QRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ--------DR 454
Query: 269 DTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 325
+ +LV TF++ ++ Y K L+ + PD +++ L++N L +
Sbjct: 455 GISPNLV-------TFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR 507
Query: 326 KATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 385
+ A F + P+ I Y+ILI C + G + +
Sbjct: 508 AKEIKDA--FDCFKEMLEWGIEPNEITYNILIRSCCST---------------GDTDRSV 550
Query: 386 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
+ M P+ YN I C V KA ++ K ML G F+ LIKAL
Sbjct: 551 KLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKAL 610
Query: 446 YCDERYNEMSWVIRNTLRSCNLNDSEQLKILDEID 480
R +E + + R + DS ++++E+D
Sbjct: 611 SESGRESEAREMFSSIERHGCVPDSYTKRLVEELD 645
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 139/353 (39%), Gaps = 42/353 (11%)
Query: 113 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
G+ P Y +I L L A FQ+M G P TY+ L+ C KG +
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 173 FHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 232
L ++ Q+G P++ TY LI G R DEAL+ L M L+P+E
Sbjct: 235 IRLVKQMEQEGN--------RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 233 SYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 292
+ + G R KAFE+ + +++D+N ++ + L N+
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLVGF--------MEKDSN---LQRVGYDAVLYCLSNNSM 335
Query: 293 AEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYII 352
A++ + K+ + Y+PDS ++ ++ L K R+ ++ P +
Sbjct: 336 AKETGQFLRKIGERG-YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRG--VKPGFNG 392
Query: 353 YDILIEKCANNE-FKSVVELVKGFRMRGL-------------------VNEAARARDTML 392
Y +L++ N + F +K + GL + AA M
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 393 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
R P +N + + + G+V K + + +++L +GF + + +I L
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCL 505
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 197/459 (42%), Gaps = 57/459 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +N+LI + N N + + ++ +Y +M +SP+ +I FC R
Sbjct: 91 PDSRLWNSLIH-----QFNVN-GLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGR 144
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ A+ +LR + +S +Y+ +IS C++ +A + EM+ GI PD +Y
Sbjct: 145 LSFAISLLR---NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNT 201
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C + A+ L E+ + T+ L+ +Y ++L I++
Sbjct: 202 LIDGFCKVGNFVRAKALVDEISELNLI----THTILLSSY---------YNLH--AIEEA 246
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ ++ F P +VT++++I+ LC + E +LR M EM + P+ V+Y+ ++ +
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED--KAEMAL 301
R A L +M + P+D L+ L + A D +AE
Sbjct: 307 ANIYRHALALYSQMVVRGI--PVDLVVYTVLMDGL------------FKAGDLREAEKTF 352
Query: 302 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCA 361
K+ + +P+ V+Y L++GL K A L+ +II +L EK
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCK----------------AGDLSSAEFIITQML-EKSV 395
Query: 362 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 421
+ ++ G+ +G++ EA M +N P G Y +I G A +
Sbjct: 396 IPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIE 455
Query: 422 MYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRN 460
+ KEM G + + + AL+ L R E+ ++++
Sbjct: 456 LSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKD 494
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 52/366 (14%)
Query: 4 PDCVTYNTLISAACE--------------AEKN---HNLSIPYV----RIVELYHQMCVR 42
PD V+YNTLI C+ +E N H + + I E Y M +
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMS 253
Query: 43 ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 102
P+ T+ +I C +V E +LR M E + P+ +Y+ ++ K A
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 103 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 162
L + +M+ +GI D+ Y +L+ L L EA F+ +L P TY LV+
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 163 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 222
C G+ S + ++++K S P++VTY+++I+G +EA+ +LR M
Sbjct: 374 LCKAGDLSSAEFIITQMLEK--------SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 223 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM---DQKETCWPLDQDTN-------- 271
+ + P+ +Y VI G + + A EL EM +E + LD N
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 272 ---ESLVKDLSNHDT------FSSLVNDY--CAEDKAEMALKLRYQAQYLP-DSVSYCLL 319
+ LVKD+ + ++SL++ + +++A +A Q + +P D VSY +L
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545
Query: 320 LNGLHK 325
++G+ K
Sbjct: 546 ISGMLK 551
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 183/435 (42%), Gaps = 57/435 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ TY T+I +A K +EL +M + + N ++ R
Sbjct: 432 PNGFTYGTVIDGLFKAGKEE-------MAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++E G+++ M KG++ +Y+ +I F K + AL EM ++G+ DV +Y +
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI + ++ A ++ M +G+ P T++ ++ + +G+ + L D++ G
Sbjct: 545 LISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 603
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
PSL++ N ++ LC + +EA+ IL M M + P+ +Y + +
Sbjct: 604 I--------KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVK---DLSNHDTFSSLVNDYCA---EDKA 297
+ F+ T+E+L+ LS +++L+ C KA
Sbjct: 656 HKRADAIFK-----------------THETLLSYGIKLSRQ-VYNTLIATLCKLGMTKKA 697
Query: 298 EMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
M + ++PD+V++ L++G +++ +H S Y +++
Sbjct: 698 AMVMGDMEARGFIPDTVTFNSLMHG---------------YFVGSHVRKALS--TYSVMM 740
Query: 358 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVH 417
E + + +++G GL+ E + M R RP+ YN LI GN+
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 800
Query: 418 KAYDMYKEMLHYGFV 432
+ +Y EM+ G V
Sbjct: 801 GSMTIYCEMIADGLV 815
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 198/462 (42%), Gaps = 52/462 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTY L+ C+A +LS I QM + + PN TY MI + +
Sbjct: 362 PNVVTYTALVDGLCKA---GDLSSAEFIIT----QMLEKSVIPNVVTYSSMINGYVKKGM 414
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+EEAV +LR M ++ + P+ +Y +I K + A+E+ EM G+ + +
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ L R+ E + L ++M+ +G++ Y +L++ + G+ +E+ ++G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+P+ V V+YN LI G+ F + A +GM E ++PD +++ +++ R+
Sbjct: 535 -MPWDV-------VSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRK 585
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ +L D+ ++C SL+ + + +V C K E A+ +
Sbjct: 586 QGDSEGILKL---WDKMKSC-----GIKPSLM-------SCNIVVGMLCENGKMEEAIHI 630
Query: 304 RYQAQYL---PDSVSYCLLLN--GLHKKATSRFAT-RLLLFYIVAHCLTIPSYIIYDI-- 355
Q + P+ +Y + L+ HK+A + F T LL Y + + + +I +
Sbjct: 631 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690
Query: 356 --LIEKCA----NNEFKSVV-------ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 402
+ +K A + E + + L+ G+ + V +A M+ P A
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 750
Query: 403 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 444
YN +I G + + EM G F+ ALI
Sbjct: 751 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 138/326 (42%), Gaps = 27/326 (8%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD T+N ++++ + + I++L+ +M + P+ + ++ + C+
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEG-------ILKLWDKMKSCGIKPSLMSCNIVVGMLCENG 622
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++EEA+ IL M + P+ +Y + K+K + +L GI Y
Sbjct: 623 KMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYN 682
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI LC +A + +M RG P T+++L+ Y + K +++
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA 742
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G SP++ TYN +I GL E + L M + PD+ +Y+A+ISG
Sbjct: 743 G--------ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQA 794
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
+I ++ + + EM + LV S ++ S + +A LK
Sbjct: 795 KIGNMKGSMTIYCEM------------IADGLVPKTSTYNVLISEFANVGKMLQARELLK 842
Query: 303 LRYQAQYLPDSVSYCLLLNGLHKKAT 328
+ P++ +YC +++GL K T
Sbjct: 843 EMGKRGVSPNTSTYCTMISGLCKLCT 868
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/449 (20%), Positives = 184/449 (40%), Gaps = 50/449 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTY TL+ + +A Y + LY QM VR + + Y ++
Sbjct: 292 PNHVTYTTLVDSLFKAN-------IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ EA +++ E P+ +Y+ ++ CK ++ A + +ML+K + P+V Y
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I + L EA L ++M + + P G TY T+++ G+ L E+
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM---- 460
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ + +AL++ L R E +++ M + D+++Y+++I F +
Sbjct: 461 ----RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ A EM ++ W D+ +++ S + + + A+ A K
Sbjct: 517 GGDEEAALAWAEEMQERGMPW------------DVVSYNVLISGMLKF-GKVGADWAYKG 563
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CAN 362
+ PD ++ +++N K+ S L L+ + C PS + +I++ C N
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGI--LKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Query: 363 NEFKSVVELVKGFRM----------RGLVNEAARAR---------DTMLHRNYRPEGAVY 403
+ + + ++ + R ++ +++ + +T+L + VY
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 404 NLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
N LI C G KA + +M GF+
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFI 710
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 146/361 (40%), Gaps = 69/361 (19%)
Query: 113 GIFPDVHAYGLLIQL-----LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 167
G+ PD + LI L H + L ++ +M+ G+SP + L+ ++C G
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSL----IYSKMIACGVSPDVFALNVLIHSFCKVG 143
Query: 168 EFS-KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
S + L++ VI S VTYN +I GLC DEA + L M +M
Sbjct: 144 RLSFAISLLRNRVI------------SIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMG 191
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD--------- 277
+ PD VSY+ +I GF ++ +A L E+ + L+ T+ L+
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE------LNLITHTILLSSYYNLHAIEE 245
Query: 278 ------LSNHD----TFSSLVNDYCAEDKA-EMALKLR--YQAQYLPDSVSYCLLLNGLH 324
+S D TFSS++N C K E L LR + P+ V+Y L++ L
Sbjct: 246 AYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF 305
Query: 325 KKATSRFATRLLLFYIVAHCLTIP-SYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNE 383
K R A L Y IP ++Y +L++ G G + E
Sbjct: 306 KANIYRHA---LALYSQMVVRGIPVDLVVYTVLMD---------------GLFKAGDLRE 347
Query: 384 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 443
A + +L N P Y L+ C G++ A + +ML + ++ + ++I
Sbjct: 348 AEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN 407
Query: 444 A 444
Sbjct: 408 G 408
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 17/266 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYV-RIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
P T+ L+S AC A + SI V R++ L M L P++ T +R C+
Sbjct: 120 PGRSTFLILLSHACRAPDS---SISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETG 173
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAY 121
RV+EA +++ + EK P +Y+ ++ CK K++ E EM D + PD+ ++
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+LI +C+ + L EA L ++ G P Y+T+++ +C + S+ + ++ +
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+G P +TYN LI GL R +EA L+ M + +PD +Y+++++G
Sbjct: 294 EG--------VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 242 RRIRELRKAFELKLEMDQKETCWPLD 267
R E A L EM+ + C P D
Sbjct: 346 CRKGESLGALSLLEEMEAR-GCAPND 370
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 14/252 (5%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
+ PD TYN L+ C K +L + Y + E+ V+ P+ ++ +I C+
Sbjct: 190 SPPDTYTYNFLLKHLC---KCKDLHVVYEFVDEMRDDFDVK---PDLVSFTILIDNVCNS 243
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+ EA+ ++ + G P Y+ I+ FC + +A+ + +M ++G+ PD Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
LI L R+ EAR + M+ G P TY +L+ C KGE L +E+
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+G +P+ TYN L+HGLC + D+ +E+ M + + Y+ ++
Sbjct: 364 RG--------CAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSL 415
Query: 242 RRIRELRKAFEL 253
+ ++ +A+E+
Sbjct: 416 VKSGKVAEAYEV 427
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PDC YNT++ C K V +Y +M + P++ TY +I R
Sbjct: 263 PDCFLYNTIMKGFCTLSKGS-------EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VEEA L+ M + G P +Y+ +++ C+ E AL + EM +G P+ Y
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNT 375
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
L+ LC R + + +L++ M G+ Y TLV + G+ ++ + + D +
Sbjct: 376 LLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV 432
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 109 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 168
M++ G+ PD + ++ LC R+ EA+DL +E+ + P TY+ L++ C +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 169 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 228
V+ DE ++ F P LV++ LI +C + EA+ ++ +
Sbjct: 210 LHVVYEFVDE-MRDDF------DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 229 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLV 288
PD Y+ ++ GF + + +A + +M KE DQ T +L+ LS
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKM--KEEGVEPDQITYNTLIFGLSKAGRV---- 316
Query: 289 NDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL 336
++A M LK A Y PD+ +Y L+NG+ +K S A LL
Sbjct: 317 ------EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLL 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD +TYNTLI +A + + +V+ ++ P+ TY ++ C +
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE-------PDTATYTSLMNGMCRKG 349
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
A+ +L M +G +P+ +Y+ ++ CK + M K +E+ M G+ + + Y
Sbjct: 350 ESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYA 409
Query: 123 LLIQLLCHQRRLLEARDLF 141
L++ L ++ EA ++F
Sbjct: 410 TLVRSLVKSGKVAEAYEVF 428
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 113/300 (37%), Gaps = 50/300 (16%)
Query: 140 LFQEMLLR--GMSPGGRTYDTLVEAYCLKGE--FSKVFHLQDEVIQKGFLPYYVTSFSPS 195
LFQ +L PG T+ L+ C + S V + + ++ G P
Sbjct: 107 LFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGL--------EPD 158
Query: 196 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 255
VT + + LC R DEA ++++ + E PD +Y+ ++ + ++L +E
Sbjct: 159 QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVD 218
Query: 256 EMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPD 312
EM D D LV +F+ L+++ C A+ L + A + PD
Sbjct: 219 EMRD-------DFDVKPDLV-------SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 313 SVSYCLLLNGLHKK--ATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVE 370
C L N + K S+ + + ++ + P I Y+ LI
Sbjct: 265 ----CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF------------ 308
Query: 371 LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
G G V EA TM+ Y P+ A Y L+ C G A + +EM G
Sbjct: 309 ---GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 365
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 164/398 (41%), Gaps = 66/398 (16%)
Query: 32 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 91
I E+ M + E E Y MI C R A I+ +M KGL P SY+ II
Sbjct: 291 IFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIH 350
Query: 92 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML------ 145
CK+ +A ++ E + FP + Y LL++ LC + +AR++ + ML
Sbjct: 351 GLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGAD 410
Query: 146 --------LRGM---------------------SPGGRTYDTLVEAYCLKGEFSKVFHLQ 176
LRG+ P T +T++ C G +
Sbjct: 411 RTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVL 470
Query: 177 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL-RGMPEMLLDPDEVSYS 235
D+++ F +P VT N ++ GL R +EAL++L R MPE + P V+Y+
Sbjct: 471 DDMMTGKFC-------APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYN 523
Query: 236 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED 295
AVI G ++ + +A + ++++ ++ T++ +++ C +
Sbjct: 524 AVIRGLFKLHKGDEAMSVFGQLEKASVT---------------ADSTTYAIIIDGLCVTN 568
Query: 296 KAEMALKLRYQAQYLP----DSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYI 351
K +MA K + P D+ Y L GL + A L Y +A IP+ +
Sbjct: 569 KVDMAKKF-WDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFL--YDLADSGAIPNVV 625
Query: 352 IYDILIEKCANNEFK-SVVELVKGFRMRGLVNEAARAR 388
Y+ +I +C+ + K ++++ R G +A R
Sbjct: 626 CYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWR 663
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 174/449 (38%), Gaps = 61/449 (13%)
Query: 13 ISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILR 72
I + C +N + ++ RI++ +C+R P+ +I CD R +EA
Sbjct: 61 IHSICAVRRNPDEAL---RILD---GLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFL 114
Query: 73 LMAEKGLSPHADSYSRIISRFCKNKEMGKALEM--KVEMLDKGIFPDVHAYGLLIQLLCH 130
L G P + + II+R ++ L + ++ K P + Y L+ LC
Sbjct: 115 LFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCT 174
Query: 131 QRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 190
R+++A L +M RG P T+ TL+ YC E EV K F V
Sbjct: 175 IYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIREL--------EVAHKVFDEMRVC 226
Query: 191 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS-----YSAVISGFRRIR 245
P+ +T + LI G + + ++++ + E + + + S ++ ++ R
Sbjct: 227 GIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREG 286
Query: 246 ELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY 305
FE+ N SL + ++ + +++ C + A ++ Y
Sbjct: 287 YFNDIFEIA---------------ENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVY 331
Query: 306 --QAQYL-PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCA- 361
+++ L P SY +++GL K A +LL + PS Y +L+E
Sbjct: 332 IMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLL--EEGSEFEFFPSEYTYKLLMESLCK 389
Query: 362 ---NNEFKSVVEL-----------VKGFRMRGLV-----NEAARARDTMLHRNYRPEGAV 402
+ ++V+EL + +RGL E +ML + RP+
Sbjct: 390 ELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYT 449
Query: 403 YNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
N +I C G V A + +M+ F
Sbjct: 450 LNTVINGLCKMGRVDDAMKVLDDMMTGKF 478
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 104/504 (20%), Positives = 187/504 (37%), Gaps = 112/504 (22%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMI-RLFCDRN 62
PD + +++I + C+A + ++ + P+E T +I RL R+
Sbjct: 88 PDSLNLSSVIHSLCDAGRFDEAHRRFLLFL-------ASGFIPDERTCNVIIARLLYSRS 140
Query: 63 RVEEAVGILRLMA-EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
V I RL+ +K P +Y+R++++ C + A ++ +M ++G PDV +
Sbjct: 141 PVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTF 200
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT-------------------------- 155
LI C R L A +F EM + G+ P T
Sbjct: 201 TTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE 260
Query: 156 --------------YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL---VT 198
+ LV++ C +G F+ +F + + + S S+
Sbjct: 261 YMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM-----------SLCESVNVEFA 309
Query: 199 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 258
Y +I LC ++R A I+ M L P SY+A+I G + +A++L LE
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQL-LEEG 368
Query: 259 QKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVS 315
+ +P + T+ L+ C E KA L+L
Sbjct: 369 SEFEFFPSEY--------------TYKLLMESLCKELDTGKARNVLELM----------- 403
Query: 316 YCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIE----KCANNEFKSVVEL 371
L K+ R TR+ Y+ C+ I ++L+ C +E+ ++ +
Sbjct: 404 -------LRKEGADR--TRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEY-TLNTV 453
Query: 372 VKGFRMRGLVNEAARARDTMLHRNY-RPEGAVYNLLIFDHCIGGNVHKAYD-----MYKE 425
+ G G V++A + D M+ + P+ N ++ G +A D M +
Sbjct: 454 INGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPEN 513
Query: 426 MLHYGFVCHMFSVLALIKALYCDE 449
+ G V + + L K DE
Sbjct: 514 KIKPGVVAYNAVIRGLFKLHKGDE 537
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 179/426 (42%), Gaps = 62/426 (14%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVE-LYHQMCVRELSPNETTYRCMIRLFCDR 61
+P TYN L+ N +S +V E ++ M + P+ TY MI+ +C
Sbjct: 219 EPTLYTYNFLM--------NGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+ ++A+ LR M +G +Y +I + + G + + EM +KGI HA+
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
L+I LC + +L E +F+ M+ +G P Y L++ Y G L +I
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+G F P +VTY+ +++GLC R +EAL+ L + + YS++I G
Sbjct: 391 EG--------FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGL 442
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
+ + +A L EM +K T +S +++L++ + K + A+
Sbjct: 443 GKAGRVDEAERLFEEMSEKGC-------TRDSYC--------YNALIDAFTKHRKVDEAI 487
Query: 302 KL--RYQAQYLPDSV--SYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
L R + + D +Y +LL+G+ K+ + A +L +D++I
Sbjct: 488 ALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL-----------------WDMMI 530
Query: 358 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNL----LIFDHCIG 413
+K L G + G V A + D + P G + + +I C
Sbjct: 531 DKGITPTAACFRALSTGLCLSGKVARACKILDELA-----PMGVILDAACEDMINTLCKA 585
Query: 414 GNVHKA 419
G + +A
Sbjct: 586 GRIKEA 591
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 161/405 (39%), Gaps = 53/405 (13%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 113
+I+ F VEE + + R M E G+ P +Y+ +++ + A E E+++ G
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA-ERVFEVMESG 251
Query: 114 -IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
I PD+ Y +I+ C + +A + ++M RG TY T+++A +F
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 173 FHLQDEVIQKGF-LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 231
L E+ +KG +P + ++ +I GLC + +E + M P+
Sbjct: 312 VALYQEMDEKGIQVPPH---------AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 232 VSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDY 291
Y+ +I G+ + + A L M +D+ +V T+S +VN
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRM--------IDEGFKPDVV-------TYSVVVNGL 407
Query: 292 CAEDKAEMALKLRYQAQY---LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIP 348
C + E AL + ++ +S+ Y L++GL K A RL C T
Sbjct: 408 CKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC-TRD 466
Query: 349 SYIIYDILIEKCANNE--------FKSVVE-------------LVKGFRMRGLVNEAARA 387
SY Y+ LI+ + FK + E L+ G EA +
Sbjct: 467 SY-CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 388 RDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
D M+ + P A + L C+ G V +A + E+ G +
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 23/265 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTY T++ + R++E +M R P+ TTY ++ +C R
Sbjct: 224 PNLVTYTTILGGYVARGDMESAK----RVLE---EMLDRGWYPDATTYTVLMDGYCKLGR 276
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
EA ++ M + + P+ +Y +I CK K+ G+A M EML++ PD
Sbjct: 277 FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCK 336
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I LC ++ EA L+++ML P TL+ C +G ++ L DE +KG
Sbjct: 337 VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKG 395
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ PSL+TYN LI G+C EA + M E P+ +Y+ +I G +
Sbjct: 396 SI--------PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447
Query: 244 ---IRELRKAFELKLEMDQKETCWP 265
++E + E LE+ C+P
Sbjct: 448 NGNVKEGVRVLEEMLEIG----CFP 468
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 35/321 (10%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
++PN T +++ C +N +E A +L + GL P+ +Y+ I+ + +M A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
+ EMLD+G +PD Y +L+ C R EA + +M + P TY ++ A
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
C + + + ++ DE++++ F+P SL +I LC + DEA + R M
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMP------DSSLCC--KVIDALCEDHKVDEACGLWRKML 358
Query: 224 EMLLDPDEVSYSAVISGF---RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 280
+ PD S +I R+ E RK F+ ++ + SL+
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFD------------EFEKGSIPSLL----- 401
Query: 281 HDTFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLL 337
T+++L+ C + + A +L Y+ + P++ +Y +L+ GL K + R+L
Sbjct: 402 --TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459
Query: 338 FYIVAHCLTIPSYIIYDILIE 358
+ C P+ + IL E
Sbjct: 460 EMLEIGCF--PNKTTFLILFE 478
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 165/408 (40%), Gaps = 58/408 (14%)
Query: 52 RCMIRLFCD--RN-----RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
+C LF D RN R E ++ I + + G+ S + +++ +N+
Sbjct: 117 KCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHA 176
Query: 105 M-KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
M K GI P++ LL++ LC + + A + E+ G+ P TY T++ Y
Sbjct: 177 MFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGY 236
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
+G+ + +E++ +G+ P TY L+ G C R EA ++ M
Sbjct: 237 VARGDMESAKRVLEEMLDRGWYP--------DATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 224 EMLLDPDEVSYSAVISGF---RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 280
+ ++P+EV+Y +I ++ E R F+ LE S + D S
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLE---------------RSFMPDSS- 332
Query: 281 HDTFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLL 337
+++ C + K + A L + +PD+ L++ L K+ A +L
Sbjct: 333 --LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD 390
Query: 338 FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYR 397
+ +IPS + Y+ LI G +G + EA R D M R +
Sbjct: 391 EFEKG---SIPSLLTYNTLI---------------AGMCEKGELTEAGRLWDDMYERKCK 432
Query: 398 PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
P YN+LI GNV + + +EML G + + L L + L
Sbjct: 433 PNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ VTY +I A C+ +K+ ++ +M R P+ + +I C+ +
Sbjct: 293 EPNEVTYGVMIRALCKEKKSGEAR-------NMFDEMLERSFMPDSSLCCKVIDALCEDH 345
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+V+EA G+ R M + P S +I CK + +A ++ + +KG P + Y
Sbjct: 346 KVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKL-FDEFEKGSIPSLLTYN 404
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI +C + L EA L+ +M R P TY+ L+E G + + +E+++
Sbjct: 405 TLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEI 464
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
G P+ T+ L GL + ++A++I+ M M D+ S+ + F
Sbjct: 465 GCF--------PNKTTFLILFEGLQKLGKEEDAMKIV-SMAVMNGKVDKESWELFLKKF 514
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 173/367 (47%), Gaps = 38/367 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P ++Y TL++A ++ ++S IV Q + + + +I F +
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSIS----SIVSEVEQSGTK---LDSIFFNAVINAFSESGN 130
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG---IFPDVHA 120
+E+AV L M E GL+P +Y+ +I + + ++ E+ ML++G + P++
Sbjct: 131 MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRT 190
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
+ +L+Q C ++++ EA ++ ++M G+ P TY+T+ Y KGE + EV+
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE---TVRAESEVV 247
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+K + P+ T ++ G C R + L +R M EM ++ + V ++++I+G
Sbjct: 248 EKMVMKEKA---KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKA 297
F + ++ D + L ++ N VK ++ T+S+++N + + +KA
Sbjct: 305 FVEV----------MDRDGIDEVLTLMKECN---VK--ADVITYSTVMNAWSSAGYMEKA 349
Query: 298 EMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
K +A PD+ +Y +L G + + A LL IV + P+ +I+ +I
Sbjct: 350 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE---SRPNVVIFTTVI 406
Query: 358 EK-CANN 363
C+N
Sbjct: 407 SGWCSNG 413
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 164/402 (40%), Gaps = 48/402 (11%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 113
++ + +R R EA + + +AE G P SY+ +++ K+ G + E+ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 114 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
D + +I + +A +M G++P TY+TL++ Y + G+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 174 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 233
L D ++++G + P++ T+N L+ C ++ +EA E+++ M E + PD V+
Sbjct: 171 ELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 234 YSAVISGF-RRIRELRKAFELKLEMDQKETCWPLDQDTN--------ESLVKDL------ 278
Y+ + + + ++ +R E+ +M KE P + E V+D
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRR 285
Query: 279 -------SNHDTFSSLVNDYCA---EDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKAT 328
+N F+SL+N + D + L L + D ++Y ++N
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGY 345
Query: 329 SRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARAR 388
A + +F + P Y I L KG+ +A
Sbjct: 346 MEKAAQ--VFKEMVKAGVKPDAHAYSI---------------LAKGYVRAKEPKKAEELL 388
Query: 389 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
+T++ + RP ++ +I C G++ A ++ +M +G
Sbjct: 389 ETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG 429
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 16/251 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELS-PNETTYRCMIRLFCDRN 62
PD VTYNT+ A C +K + E+ +M ++E + PN T ++ +C
Sbjct: 221 PDTVTYNTI--ATCYVQKGETVRAES----EVVEKMVMKEKAKPNGRTCGIVVGGYCREG 274
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
RV + + +R M E + + ++ +I+ F + + E+ M + + DV Y
Sbjct: 275 RVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYS 334
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++ + +A +F+EM+ G+ P Y L + Y E K L
Sbjct: 335 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL------- 387
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
L + P++V + +I G C D+A+ + M + + P+ ++ ++ G+
Sbjct: 388 --LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYL 445
Query: 243 RIRELRKAFEL 253
+++ KA E+
Sbjct: 446 EVKQPWKAEEV 456
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 137/308 (44%), Gaps = 40/308 (12%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P TYNTLI A K S +++L + ++ PN T+ +++ +C +
Sbjct: 147 NPTTSTYNTLIKGYGIAGKPERSS----ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE--MLDKGIFPDVHA 120
+VEEA +++ M E G+ P +Y+ I + + + E +A VE ++ + P+
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
G+++ C + R+ + + M + +++L+ + EV+
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV-------------EVM 309
Query: 181 QKGFLPYYVT-----SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 235
+ + +T + ++TY+ +++ ++A ++ + M + + PD +YS
Sbjct: 310 DRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 236 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED 295
+ G+ R +E +KA EL LE +V+ N F+++++ +C+
Sbjct: 370 ILAKGYVRAKEPKKAEEL-LET---------------LIVESRPNVVIFTTVISGWCSNG 413
Query: 296 KAEMALKL 303
+ A+++
Sbjct: 414 SMDDAMRV 421
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
L PN ++ +I+ F D+ E A + M E + P +Y+ +I C+N +MGKA
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
+ +M+ K I P+ +GLL++ LC + EA+ L +M RG PG Y L+
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
+G + L E+ ++ P +V YN L++ LC R EA +L M
Sbjct: 302 GKRGRIDEAKLLLGEMKKR--------RIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 224 EMLLDPDEVSYSAVISGFRRIREL 247
P+ +Y +I GF RI +
Sbjct: 354 MKGCKPNAATYRMMIDGFCRIEDF 377
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 21/241 (8%)
Query: 4 PDCVTYNTLISA---ACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
P+ V++N LI C+ E +++ +M E+ P+ TY +I C
Sbjct: 184 PNSVSFNILIKGFLDKCDWEA----------ACKVFDEMLEMEVQPSVVTYNSLIGFLCR 233
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+ + +A +L M +K + P+A ++ ++ C E +A ++ +M +G P +
Sbjct: 234 NDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVN 293
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
YG+L+ L + R+ EA+ L EM R + P Y+ LV C + + + + E+
Sbjct: 294 YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
KG P+ TY +I G C + D L +L M P ++ +++G
Sbjct: 354 MKG--------CKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAG 405
Query: 241 F 241
Sbjct: 406 L 406
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 135/305 (44%), Gaps = 34/305 (11%)
Query: 31 RIVELYHQM----CVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 86
+ ++++H++ CVR + T +I + D +E+A + L P++ S+
Sbjct: 134 KAIDVFHKITSFDCVRTIQSLNT----LINVLVDNGELEKAKSFFDGAKDMRLRPNSVSF 189
Query: 87 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 146
+ +I F + A ++ EML+ + P V Y LI LC + +A+ L ++M+
Sbjct: 190 NILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK 249
Query: 147 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 206
+ + P T+ L++ C KGE+++ L ++ +G P LV Y L+ L
Sbjct: 250 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG--------CKPGLVNYGILMSDL 301
Query: 207 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 266
R DEA +L M + + PD V Y+ +++ + +A+ + EM Q + C P
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM-QMKGCKP- 359
Query: 267 DQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGL 323
N T+ +++ +C + + L + +++ P ++ ++ GL
Sbjct: 360 -------------NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGL 406
Query: 324 HKKAT 328
K
Sbjct: 407 IKGGN 411
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P VTYN+LI C +N ++ + L M + + PN T+ +++ C +
Sbjct: 219 PSVVTYNSLIGFLC---RNDDMG----KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGE 271
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
EA ++ M +G P +Y ++S K + +A + EM + I PDV Y +
Sbjct: 272 YNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNI 331
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ LC + R+ EA + EM ++G P TY +++ +C +F ++ + ++
Sbjct: 332 LVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAML--- 388
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
+ P+ T+ ++ GL D A +L M + L ++ ++S
Sbjct: 389 -----ASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLS 439
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 53/338 (15%)
Query: 101 KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 160
+AL + + + G D +Y LI L R + + + R + + L+
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 161 EAYCLKGEFSK---VFHLQDEVIQKGFLPYYVTSFS--PSLVTYNALIHGLCFFQRPDEA 215
+ Y G K VFH +TSF ++ + N LI+ L ++A
Sbjct: 124 QHYGKAGSVDKAIDVFH-------------KITSFDCVRTIQSLNTLINVLVDNGELEKA 170
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
G +M L P+ VS++ +I GF + A ++ EM L+ + S+V
Sbjct: 171 KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM--------LEMEVQPSVV 222
Query: 276 KDLSNHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
T++SL+ C D KA+ L+ + + P++V++ LL+ GL K A
Sbjct: 223 -------TYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEA 275
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 392
+L+ C P + Y IL+ RG ++EA M
Sbjct: 276 KKLMFDMEYRGCK--PGLVNYGILMSDLGK---------------RGRIDEAKLLLGEMK 318
Query: 393 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
R +P+ +YN+L+ C V +AY + EM G
Sbjct: 319 KRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 155/388 (39%), Gaps = 39/388 (10%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+ L+HQ + +Y +I + ILRL+ + + + +I
Sbjct: 66 LSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQH 125
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
+ K + KA+++ ++ + + LI +L L +A+ F + P
Sbjct: 126 YGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPN 185
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
+++ L++ + K ++ + DE+++ PS+VTYN+LI LC
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLE--------MEVQPSVVTYNSLIGFLCRNDDM 237
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
+A +L M + + P+ V++ ++ G E +A +L +M+ + C P
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYR-GCKP------- 289
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
L N+ S + D+A++ L + + PD V Y +L+N L + A
Sbjct: 290 ----GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEA 345
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTM 391
R+L + C P+ Y ++I+ C +F S + ++ + M
Sbjct: 346 YRVLTEMQMKGCK--PNAATYRMMIDGFCRIEDFDSGLNVL----------------NAM 387
Query: 392 LHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
L + P A + ++ GGN+ A
Sbjct: 388 LASRHCPTPATFVCMVAGLIKGGNLDHA 415
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 175/416 (42%), Gaps = 43/416 (10%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
++Y MC + PN T+ + +FC+ + E L M E+G P +Y+ ++S +
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
C+ + +A + M + + PD+ Y LI+ LC R+ EA F M+ RG+ P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
+Y+TL+ AYC +G + L E++ S P T ++ G R
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLG--------NSVVPDRFTCKVIVEGFVREGRLL 393
Query: 214 EALEILRGMPEMLLD-PDEVSYSAVISGFRRIRELRKAFELKLEMDQ--KETCWPLDQDT 270
A+ + + + +D P EV ++S + + K F K +D+ +E +T
Sbjct: 394 SAVNFVVELRRLKVDIPFEVCDFLIVS----LCQEGKPFAAKHLLDRIIEEEGHEAKPET 449
Query: 271 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSR 330
+L++ LS D E+ + KL+ Q Q L D+ +Y L+ L + +R
Sbjct: 450 YNNLIESLSRCDAI---------EEALVLKGKLKNQNQVL-DAKTYRALIGCLCRIGRNR 499
Query: 331 FATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDT 390
A L+ + + S+I ++ C +F L+ F M
Sbjct: 500 EAESLMAEMFDSE-VKPDSFICGALVYGYCKELDFDKAERLLSLFAME------------ 546
Query: 391 MLHRNYRPEGAVYNLLIFDHC-IGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
R + PE YN L+ C G KA ++ + M GFV + + LI+ L
Sbjct: 547 --FRIFDPES--YNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 133/326 (40%), Gaps = 36/326 (11%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VTYNTL+S+ C + LY M R + P+ TY +I+ C
Sbjct: 268 EPDLVTYNTLVSSYCRRGR-------LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDG 320
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
RV EA M ++G+ P SY+ +I +CK M ++ ++ EML + PD
Sbjct: 321 RVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCK 380
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++++ + RLL A + E+ + D L+ + C +G+ HL D +I++
Sbjct: 381 VIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEE 440
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
TYN LI L +EAL + + D +Y A+I
Sbjct: 441 -------EGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLC 493
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTF--SSLVNDYCAE---DKA 297
RI R+A L EM E D+F +LV YC E DKA
Sbjct: 494 RIGRNREAESLMAEMFDSEV-----------------KPDSFICGALVYGYCKELDFDKA 536
Query: 298 EMALKLRYQAQYLPDSVSYCLLLNGL 323
E L L + D SY L+ +
Sbjct: 537 ERLLSLFAMEFRIFDPESYNSLVKAV 562
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 8/194 (4%)
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VEE + R + + G S + + +++ K M ++ M GI P+ + + +
Sbjct: 182 VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNI 241
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L + C+ E D ++M G P TY+TLV +YC +G + F+L
Sbjct: 242 LTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYL-------- 293
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ Y P LVTY +LI GLC R EA + M + + PD +SY+ +I + +
Sbjct: 294 YKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCK 353
Query: 244 IRELRKAFELKLEM 257
++++ +L EM
Sbjct: 354 EGMMQQSKKLLHEM 367
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 171/438 (39%), Gaps = 66/438 (15%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V YNTL+ A C KN + R L +M PN+ T+ +I +C+ +
Sbjct: 215 PNAVVYNTLLHALC---KNGKVG----RARSLMSEM----KEPNDVTFNILISAYCNEQK 263
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ +++ +L G P + ++++ C + +ALE+ + KG DV A
Sbjct: 264 LIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT 323
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L++ C ++ A+ F EM +G P TY+ L+ YC G
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDT-------- 375
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV------SYSAV 237
F + + T+N LI GL R D+ L+IL EM+ D D V Y+ V
Sbjct: 376 FNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKIL----EMMQDSDTVHGARIDPYNCV 431
Query: 238 ISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK--DLSNHDTFSSLVNDYCAED 295
I GF + A E L+M E +P D + L+ + D + + E
Sbjct: 432 IYGFYKENRWEDALEFLLKM---EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEG 488
Query: 296 KAEMALKLRYQAQYLPDSVSYCLLLN-GLHKKATSRFATRLLLFYIVAHCLTIPSYIIYD 354
+ VS+CL+ H K L+ +V S
Sbjct: 489 GVPSII------------VSHCLIHRYSQHGKIEESLE---LINDMVTRGYLPRSSTFNA 533
Query: 355 ILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGG 414
++I C ++ + ++ V+ RG V P+ YN L+ + C+ G
Sbjct: 534 VIIGFCKQDKVMNGIKFVEDMAERGCV----------------PDTESYNPLLEELCVKG 577
Query: 415 NVHKAYDMYKEMLHYGFV 432
++ KA+ ++ M+ V
Sbjct: 578 DIQKAWLLFSRMVEKSIV 595
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 104/507 (20%), Positives = 196/507 (38%), Gaps = 86/507 (16%)
Query: 35 LYHQMCVRE-----------------LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK 77
L+H++CV L P++ + +IR F ++ + ++ L+++
Sbjct: 82 LFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKF 141
Query: 78 GLSPHADSYSRIISRFCKNKEMGKALEMKV-EMLDKGIFPDVHAYGLLIQLLCHQRRLLE 136
G+ P ++ I+ K +++ A E +M+ GI DV+ YG+L++ L R+ +
Sbjct: 142 GIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGD 200
Query: 137 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY--------- 187
L Q M G++P Y+TL+ A C G+ + L E+ + + +
Sbjct: 201 GFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCN 260
Query: 188 --------------YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 233
+ F P +VT ++ LC R EALE+L + D V+
Sbjct: 261 EQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVA 320
Query: 234 YSAVISGFRRIRELRKAFELKLEMDQK------ET----------CWPLDQ--DTNESLV 275
+ ++ G+ + ++R A +EM++K ET LD DT +
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 276 KDL--SNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSV------SYCLLLNGLHKKA 327
D N TF++L+ + + LK+ Q D+V Y ++ G +K+
Sbjct: 381 TDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD-SDTVHGARIDPYNCVIYGFYKEN 439
Query: 328 TSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVE----------------L 371
A LL + L EK ++ K+ + L
Sbjct: 440 RWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCL 499
Query: 372 VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
+ + G + E+ + M+ R Y P + +N +I C V ++M G
Sbjct: 500 IHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGC 559
Query: 432 VCHMFSVLALIKALYCDERYNEMSWVI 458
V S L++ L C + + +W++
Sbjct: 560 VPDTESYNPLLEEL-CVKGDIQKAWLL 585
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
Y QM P+ C+I + ++EE++ ++ M +G P + +++ +I FCK
Sbjct: 481 YDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCK 540
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
++ ++ +M ++G PD +Y L++ LC + + +A LF M+ + + P
Sbjct: 541 QDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSM 600
Query: 156 YDTLVEAYCL 165
+ +L+ +CL
Sbjct: 601 WSSLM--FCL 608
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/446 (19%), Positives = 167/446 (37%), Gaps = 66/446 (14%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAE-KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK 112
++RL D+ A+ R + G +Y + + C + ++ EM D
Sbjct: 46 IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDS 105
Query: 113 -GIFPDVHAYGLLIQLLCHQR---RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 168
G+ PD + +I+ R R++ DL + G+ P + ++++++
Sbjct: 106 IGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKF---GIKPSLKVFNSILD------- 155
Query: 169 FSKVFHLQDEVIQKGFLP--YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
V +D I + F + + TY L+ GL R + ++L+ M
Sbjct: 156 ---VLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSG 212
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS 286
+ P+ V Y+ ++ + ++ +A L EM + N TF+
Sbjct: 213 VAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE-------------------PNDVTFNI 253
Query: 287 LVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAH 343
L++ YC E K ++ L + ++PD V+ ++ L + A +L
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVL------- 306
Query: 344 CLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 403
+ + K + + LVKG+ G + A R M + Y P Y
Sbjct: 307 ----------ERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 404 NLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLR 463
NLLI +C G + A D + +M + + LI+ L R ++ ++
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 464 SCNLNDSEQLKILDEIDPERCIIYAL 489
S ++ + IDP C+IY
Sbjct: 417 SDTVHGA-------RIDPYNCVIYGF 435
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 63/129 (48%)
Query: 58 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 117
C++ +++ M +G P +I R+ ++ ++ ++LE+ +M+ +G P
Sbjct: 468 LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPR 527
Query: 118 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 177
+ +I C Q +++ ++M RG P +Y+ L+E C+KG+ K + L
Sbjct: 528 SSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFS 587
Query: 178 EVIQKGFLP 186
+++K +P
Sbjct: 588 RMVEKSIVP 596
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+EL + M R P +T+ +I FC +++V + + MAE+G P +SY+ ++
Sbjct: 513 LELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEE 572
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQ 131
C ++ KA + M++K I PD + L+ L +
Sbjct: 573 LCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQK 611
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
Y C+I F NR E+A+ L M + L P A S + C+ M +M+
Sbjct: 428 YNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMI 485
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
+G P + LI ++ E+ +L +M+ RG P T++ ++ +C + +
Sbjct: 486 GEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVM 545
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
+++ ++G +P +YN L+ LC +A + M E + PD
Sbjct: 546 NGIKFVEDMAERGCVP--------DTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPD 597
Query: 231 EVSYSAVI 238
+S+++
Sbjct: 598 PSMWSSLM 605
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 180/383 (46%), Gaps = 45/383 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P ++Y TL++A ++ ++S IV Q + + + +I F +
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSIS----SIVSEVEQSGTK---LDSIFFNAVINAFSESGN 130
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG---IFPDVHA 120
+E+AV L M E GL+P +Y+ +I + + ++ E+ ML++G + P++
Sbjct: 131 MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRT 190
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
+ +L+Q C ++++ EA ++ ++M G+ P TY+T+ Y KGE + EV+
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE---TVRAESEVV 247
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+K + P+ T ++ G C R + L +R M EM ++ + V ++++I+G
Sbjct: 248 EKMVMKEKA---KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 241 FRRIRE-----------LRKAF--ELKLEMDQKETCWPLDQDTNESLVKDL---SNHDTF 284
F + + L +F E++L +QK L +L+K+ ++ T+
Sbjct: 305 FVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVL------TLMKECNVKADVITY 358
Query: 285 SSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIV 341
S+++N + + +KA K +A PD+ +Y +L G + + A LL IV
Sbjct: 359 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV 418
Query: 342 AHCLTIPSYIIYDILIEK-CANN 363
+ P+ +I+ +I C+N
Sbjct: 419 E---SRPNVVIFTTVISGWCSNG 438
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 161/397 (40%), Gaps = 60/397 (15%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 113
++ + +R R EA + + +AE G P SY+ +++ K+ G + E+ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 114 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
D + +I + +A +M G++P TY+TL++ Y + G+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 174 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 233
L D ++++G + P++ T+N L+ C ++ +EA E+++ M E + PD V+
Sbjct: 171 ELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 234 YSAVISGF-RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 292
Y+ + + + ++ +R E+ +M KE P N T +V YC
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKP--------------NGRTCGIVVGGYC 271
Query: 293 AEDKAEMALKLRYQAQYL---PDSVSYCLLLNG----LHKKATSRFATRLLLFYIVAHCL 345
E + L+ + + + + V + L+NG + + LLL
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLM------- 324
Query: 346 TIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNL 405
F VELV +M+ + M N + + Y+
Sbjct: 325 ------------------SFNEEVELVGNQKMK------VQVLTLMKECNVKADVITYST 360
Query: 406 LIFDHCIGGNVHKAYDMYKEMLHYGFV--CHMFSVLA 440
++ G + KA ++KEM+ G H +S+LA
Sbjct: 361 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 397
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 41/276 (14%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELS-PNETTYRCMIRLFCDRN 62
PD VTYNT+ A C +K + E+ +M ++E + PN T ++ +C
Sbjct: 221 PDTVTYNTI--ATCYVQKGETVRAES----EVVEKMVMKEKAKPNGRTCGIVVGGYCREG 274
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCK---------------------NKEMGK 101
RV + + +R M E + + ++ +I+ F + E+
Sbjct: 275 RVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVG 334
Query: 102 ALEMKVEML----DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 157
+MKV++L + + DV Y ++ + +A +F+EM+ G+ P Y
Sbjct: 335 NQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 394
Query: 158 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 217
L + Y E K L L + P++V + +I G C D+A+
Sbjct: 395 ILAKGYVRAKEPKKAEEL---------LETLIVESRPNVVIFTTVISGWCSNGSMDDAMR 445
Query: 218 ILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
+ M + + P+ ++ ++ G+ +++ KA E+
Sbjct: 446 VFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 481
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
V +L LM E + +YS +++ + M KA ++ EM+ G+ PD HAY +L +
Sbjct: 340 VQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 399
Query: 128 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 187
+ +A +L + +++ P + T++ +C G + +++ + G
Sbjct: 400 YVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG---- 454
Query: 188 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
SP++ T+ L+ G ++P +A E+L+ M + P+ ++ + +R
Sbjct: 455 ----VSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWR 505
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 36/270 (13%)
Query: 4 PDCVTYNTL------ISAACEAEKN------HNLSIPYVRI-----------------VE 34
PD VT+NTL I + C AE HN P VR +
Sbjct: 493 PDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALR 552
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
+++M + PN + +I+ F + N ++ ++ LM E G+ P ++S +++ +
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+M + E+ +ML+ GI PD+HA+ +L + +A + +M G+ P
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVV 672
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 214
Y ++ +C GE K + ++ + SP+L TY LI G ++P +
Sbjct: 673 IYTQIISGWCSAGEMKKAMQVYKKMCG-------IVGLSPNLTTYETLIWGFGEAKQPWK 725
Query: 215 ALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
A E+L+ M + P + + G++ I
Sbjct: 726 AEELLKDMEGKNVVPTRKTMQLIADGWKSI 755
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 154/389 (39%), Gaps = 44/389 (11%)
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
+R R +EA I + E+G P +Y+ +++ + K L + ++ G+ PD
Sbjct: 331 ERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTI 390
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
+ +I L +A +F++M G P T++TL++ Y G+ + L D +
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
++ L P+ T N L+ C ++ +EA I+ M + PD V+++ +
Sbjct: 451 LRDEML-------QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 240 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS-NHDTFSSLVNDYCAEDKAE 298
+ RI TC D L + N T ++VN YC E K E
Sbjct: 504 AYARI---------------GSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKME 548
Query: 299 MALKLRYQAQYL---PDSVSYCLLLNGL----HKKATSRFATRLLLFYIVAHCLTIPSYI 351
AL+ Y+ + L P+ + L+ G + F + +T + +
Sbjct: 549 EALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 352 --------------IYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYR 397
IY ++E + + + L KG+ G +A + + M R
Sbjct: 609 NAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVR 668
Query: 398 PEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
P +Y +I C G + KA +YK+M
Sbjct: 669 PNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 155/380 (40%), Gaps = 51/380 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE--LSPNETTYRCMIRLFCDR 61
P T+NTLI + K S R+++ M +R+ L PN+ T +++ +C++
Sbjct: 422 PTASTFNTLIKGYGKIGKLEESS----RLLD----MMLRDEMLQPNDRTCNILVQAWCNQ 473
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV-EMLDKGIFPDVHA 120
++EEA I+ M G+ P +++ + + + A +M + ML + P+V
Sbjct: 474 RKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRT 533
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
G ++ C + ++ EA F M G+ P +++L++ + + V + D +
Sbjct: 534 CGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME 593
Query: 181 QKGFLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPD 213
+ G P VT P + ++ L G P+
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 273
+A +IL M + + P+ V Y+ +ISG+ E++KA ++ K+ C +
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQV-----YKKMCGIV------G 702
Query: 274 LVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRF-- 331
L +L+ ++T + KAE LK +P + L+ +G S
Sbjct: 703 LSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSNSND 762
Query: 332 ATRLLLFYIVAHCLTIPSYI 351
A L + + L IP+ I
Sbjct: 763 ANTLGSSFSTSSKLNIPNNI 782
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 135/364 (37%), Gaps = 78/364 (21%)
Query: 117 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 176
DV + L+ L + R EA +F ++ G P TY TLV A + F + L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 177 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 236
+V + G P + +NA+I+ D+A++I M E P +++
Sbjct: 378 SKVEKNG--------LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNT 429
Query: 237 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK 296
+I G+ +I +L ++ L M + E P D+ N LV +C + K
Sbjct: 430 LIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN--------------ILVQAWCNQRK 475
Query: 297 AEMALKLRYQAQYL---PDSVSYCLLLNG------------------LHKKATSRFAT-- 333
E A + Y+ Q PD V++ L LH K T
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCG 535
Query: 334 --------------RLLLFYIVAHCLTIPSYIIYDILIEKCAN-NEFKSVVELVKGFRMR 378
L FY + P+ +++ LI+ N N+ V E+V
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV------ 589
Query: 379 GLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF--VCHMF 436
D M +P+ ++ L+ G++ + ++Y +ML G H F
Sbjct: 590 ----------DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 639
Query: 437 SVLA 440
S+LA
Sbjct: 640 SILA 643
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 16/239 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TYN LI + S + ++L+ +M +++ P T+ +I C +R
Sbjct: 150 PDACTYNILIHGCSQ-------SGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSR 202
Query: 64 VEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
V+EA+ + M + G+ P Y+ +I C+ E+ A ++K E + I D Y
Sbjct: 203 VKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYS 262
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI L R E + +EM +G P TY+ L+ +C++ + + DE+++K
Sbjct: 263 TLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEK 322
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
G P +++YN ++ ++ +EA + MP PD +SY V G
Sbjct: 323 G--------LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P+ TY +I ++A+ + M +K + P ++ +I CK+ + +AL+M
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 106 KVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
K +ML G+ P VH Y LI+ LC L A L E + Y TL+ +
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 165 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
G ++V + +E+ +KG P VTYN LI+G C + A +L M E
Sbjct: 270 KAGRSNEVSMILEEMSEKGC--------KPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 225 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
L PD +SY+ ++ F RI++ +A L +M ++ C P
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR-GCSP 361
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D Y+TLIS+ +A +++ +S+ + +M + P+ TY +I FC N
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSM-------ILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
E A +L M EKGL P SY+ I+ F + K+ +A + +M +G PD +Y ++
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
LC + EA + EML +G P + ++ C G+
Sbjct: 370 FDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKL 414
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P Y +LI A C+ LS + E Y ++ + Y +I R
Sbjct: 221 PTVHIYASLIKALCQI---GELSFAFKLKDEAYEG----KIKVDAAIYSTLISSLIKAGR 273
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E IL M+EKG P +Y+ +I+ FC + A + EM++KG+ PDV +Y +
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ + ++ EA LF++M RG SP +Y + + C +F + + DE++ KG
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 184 FLP 186
+ P
Sbjct: 394 YKP 396
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 38/282 (13%)
Query: 151 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 210
P TY+ L+ G F L DE+++K P+ VT+ LIHGLC
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKK--------KVKPTGVTFGTLIHGLCKDS 201
Query: 211 RPDEALEILRGMPEML-LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 269
R EAL++ M ++ + P Y+++I +I EL AF+LK D+
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK------------DEA 249
Query: 270 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATS 329
+ D + + T S + ++ M L+ + PD+V+Y +L+NG + S
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 330 RFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARD 389
A R+L D ++EK + S ++ F EA +
Sbjct: 310 ESANRVL-----------------DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFE 352
Query: 390 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 431
M R P+ Y ++ C G +A + EML G+
Sbjct: 353 DMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGY 394
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTYN LI+ C + + + R+++ +M + L P+ +Y ++ +F +
Sbjct: 291 PDTVTYNVLINGFCVENDSESAN----RVLD---EMVEKGLKPDVISYNMILGVFFRIKK 343
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
EEA + M +G SP SY + C+ + +A + EML KG P
Sbjct: 344 WEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEG 403
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
+Q LC + LE L RG++ + ++ C
Sbjct: 404 FLQKLCESGK-LEILSKVISSLHRGIAGDADVWSVMIPTMC 443
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 15/240 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V +N ++ + K + ++L+H M + PN +Y MIR FC ++
Sbjct: 331 PDIVAHNVMLEGLLRSRKKSD-------AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E A+ M + GL P A Y+ +I+ F K++ E+ EM +KG PD Y
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI+L+ +Q+ A ++ +M+ + P T++ ++++Y + + + +E+I+KG
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P +Y LI GL + EA L M + + + Y+ + F R
Sbjct: 504 IC--------PDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 136/306 (44%), Gaps = 30/306 (9%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +TY L++ C NL + +++ M + L P+ + M+ +
Sbjct: 296 PNMMTYTVLLNGWCRV---RNL----IEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRK 348
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+A+ + +M KG P+ SY+ +I FCK M A+E +M+D G+ PD Y
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI Q++L +L +EM +G P G+TY+ L++ + + +++IQ
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ-- 466
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
PS+ T+N ++ + + + M + + PD+ SY+ +I G
Sbjct: 467 ------NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG--- 517
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
L E +E C L++ ++ + L +++ F++ D+ + E+ +L
Sbjct: 518 ---------LIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAA---DFHRGGQPEIFEEL 565
Query: 304 RYQAQY 309
+A++
Sbjct: 566 AQRAKF 571
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
+PN TY ++ +C + EA I M ++GL P +++ ++ ++++ A+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
++ M KG P+V +Y ++I+ C Q + A + F +M+ G+ P Y L+ +
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
+ + V+ L E+ +KG P TYNALI + + P+ A I M
Sbjct: 414 GTQKKLDTVYELLKEMQEKG--------HPPDGKTYNALIKLMANQKMPEHATRIYNKMI 465
Query: 224 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 263
+ ++P +++ ++ + R + EM +K C
Sbjct: 466 QNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC 505
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 135/349 (38%), Gaps = 76/349 (21%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE----------- 98
TY M+ + + E V +L M KGL ++++ + F KE
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELM 255
Query: 99 -----------------------MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 135
+GK ++ + L + P++ Y +L+ C R L+
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 136 EARDLFQEMLLRGMSPGGRTYDTLVEAYCL---KGEFSKVFHLQDEVIQKGFLPYYVTSF 192
EA ++ +M+ +G+ P ++ ++E K + K+FH + K P
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH-----VMKSKGP------ 364
Query: 193 SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 252
P++ +Y +I C + A+E M + L PD Y+ +I+GF ++L +E
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 253 LKLEMDQKETCWPLDQDTNESLVKDLSNHD----------------------TFSSLVND 290
L EM +K P D T +L+K ++N TF+ ++
Sbjct: 425 LLKEMQEKGH--PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 291 YCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLL 336
Y EM + + PD SY +L+ GL + SR A R L
Sbjct: 483 YFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYL 531
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/425 (19%), Positives = 166/425 (39%), Gaps = 59/425 (13%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIIS 91
++L H + V L + R FC AE+ G + + +Y+ ++S
Sbjct: 157 LDLSHDLIVEVLERFRHARKPAFRFFC-------------WAAERQGFAHDSRTYNSMMS 203
Query: 92 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 151
K ++ + + EM KG+ + + + ++ + +A +F+ M
Sbjct: 204 ILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262
Query: 152 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 211
G T + L+++ + L D++ ++ F+P+++TY L++G C +
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKER---------FTPNMMTYTVLLNGWCRVRN 313
Query: 212 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 271
EA I M + L PD V+++ ++ G R R+ A +L M K C
Sbjct: 314 LIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC-------- 365
Query: 272 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKAT 328
N +++ ++ D+C + E A++ + PD+ Y L+ G
Sbjct: 366 -------PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG------ 412
Query: 329 SRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARAR 388
F T+ L + Y + + EK + K+ L+K + + A R
Sbjct: 413 --FGTQKKLDTV---------YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIY 461
Query: 389 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCD 448
+ M+ P +N+++ + + N +++EM+ G S LI+ L +
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGE 521
Query: 449 ERYNE 453
+ E
Sbjct: 522 GKSRE 526
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 120/242 (49%), Gaps = 16/242 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYV-RIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
P T+ L+S AC A + SI V R++ L M L P++ T +R C+
Sbjct: 120 PGRSTFLILLSHACRAPDS---SISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETG 173
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAY 121
RV+EA +++ + EK P +Y+ ++ CK K++ E EM D + PD+ ++
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+LI +C+ + L EA L ++ G P Y+T+++ +C + S+ + ++ +
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+G P +TYN LI GL R +EA L+ M + +PD +Y+++++G
Sbjct: 294 EG--------VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 242 RR 243
R
Sbjct: 346 CR 347
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 19/219 (8%)
Query: 109 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 168
M++ G+ PD + ++ LC R+ EA+DL +E+ + P TY+ L++ C +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 169 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 228
V+ DE ++ F P LV++ LI +C + EA+ ++ +
Sbjct: 210 LHVVYEFVDE-MRDDF------DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 229 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLV 288
PD Y+ ++ GF + + +A + +M KE DQ T +L+ LS
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKM--KEEGVEPDQITYNTLIFGLSKAGRV---- 316
Query: 289 NDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 327
++A M LK A Y PD+ +Y L+NG+ +K
Sbjct: 317 ------EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
+ PD TYN L+ C+ + +L + Y + E+ V+ P+ ++ +I C+
Sbjct: 190 SPPDTYTYNFLLKHLCKCK---DLHVVYEFVDEMRDDFDVK---PDLVSFTILIDNVCNS 243
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+ EA+ ++ + G P Y+ I+ FC + +A+ + +M ++G+ PD Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 167
LI L R+ EAR + M+ G P TY +L+ C KG
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V +N ++ + K + ++L+H M + PN +Y MIR FC ++
Sbjct: 330 PDIVAHNVMLEGLLRSMKKSD-------AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 382
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E A+ M + GL P A Y+ +I+ F K++ E+ EM +KG PD Y
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI+L+ +Q+ ++ +M+ + P T++ ++++Y + + + DE+I+KG
Sbjct: 443 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P +Y LI GL + EA L M + + + Y+ + F R
Sbjct: 503 IC--------PDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 554
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 135/306 (44%), Gaps = 30/306 (9%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +TY L++ C NL + +++ M L P+ + M+ +
Sbjct: 295 PNMMTYTVLLNGWCRV---RNL----IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 347
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+A+ + +M KG P+ SY+ +I FCK M A+E +M+D G+ PD Y
Sbjct: 348 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 407
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI Q++L +L +EM +G P G+TY+ L++ + + +++IQ
Sbjct: 408 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ-- 465
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
PS+ T+N ++ + + + M + + PD+ SY+ +I G
Sbjct: 466 ------NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG--- 516
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
L E +E C L++ ++ + L +++ F++ D+ + E+ +L
Sbjct: 517 ---------LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAA---DFHRGGQPEIFEEL 564
Query: 304 RYQAQY 309
+A++
Sbjct: 565 AQRAKF 570
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 184/454 (40%), Gaps = 54/454 (11%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D TYN+++S + + + +V + +M + L ET + ++ F
Sbjct: 193 DSRTYNSMMSILAKTRQ-------FETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKER 244
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
++AVGI LM + ++ + ++ + K +GK ++ + L + P++ Y +L
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVL 303
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL---KGEFSKVFHLQDEVIQ 181
+ C R L+EA ++ +M+ G+ P ++ ++E K + K+FH +
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-----VM 358
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
K P P++ +Y +I C + A+E M + L PD Y+ +I+GF
Sbjct: 359 KSKGP------CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
++L +EL EM +K P D T +L+K ++N E +
Sbjct: 413 GTQKKLDTVYELLKEMQEKGH--PPDGKTYNALIKLMANQKM---------PEHGTRIYN 461
Query: 302 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCA 361
K+ Q + P ++ +++ Y VA + ++D +I+K
Sbjct: 462 KM-IQNEIEPSIHTFNMIMKS----------------YFVARNYEM-GRAVWDEMIKKGI 503
Query: 362 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 421
+ S L++G G EA R + ML + + YN D GG +
Sbjct: 504 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEE 563
Query: 422 MYKEMLHYG--FVCHMFSVLALIKALYCDERYNE 453
+ + G +F+ A + C +R+ E
Sbjct: 564 LAQRAKFSGKFAAAEIFARWAQMTRRRCKQRFME 597
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/427 (18%), Positives = 167/427 (39%), Gaps = 63/427 (14%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIIS 91
++L H + V L + R FC AE+ G + + +Y+ ++S
Sbjct: 156 LDLSHDLIVEVLERFRHARKPAFRFFC-------------WAAERQGFAHDSRTYNSMMS 202
Query: 92 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 151
K ++ + + EM KG+ + + + ++ + +A +F+ M
Sbjct: 203 ILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 261
Query: 152 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 211
G T + L+++ + L D++ ++ F+P+++TY L++G C +
Sbjct: 262 GVETINCLLDSLGRAKLGKEAQVLFDKLKER---------FTPNMMTYTVLLNGWCRVRN 312
Query: 212 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL--EMDQKETCWPLDQD 269
EA I M + L PD V+++ ++ G +R ++K+ +KL M K C
Sbjct: 313 LIEAARIWNDMIDHGLKPDIVAHNVMLEGL--LRSMKKSDAIKLFHVMKSKGPC------ 364
Query: 270 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKK 326
N +++ ++ D+C + E A++ + PD+ Y L+ G
Sbjct: 365 ---------PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG---- 411
Query: 327 ATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAAR 386
F T+ L + Y + + EK + K+ L+K + + R
Sbjct: 412 ----FGTQKKLDTV---------YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTR 458
Query: 387 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
+ M+ P +N+++ + + N ++ EM+ G S LI+ L
Sbjct: 459 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 518
Query: 447 CDERYNE 453
+ + E
Sbjct: 519 SEGKSRE 525
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 146/336 (43%), Gaps = 31/336 (9%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 88
+ R+ E +M +L T + M R F EEAVGI + E GL + +S +
Sbjct: 137 WDRMKEFVERMRGDKLVTLNTVAKIM-RRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNL 195
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
++ CK K + +A + ++ L I P+ H + + I C R+ EA QEM G
Sbjct: 196 LLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
P +Y T++ YC + EF KV+ + E+ G P+ +TY ++ L
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG--------SPPNSITYTTIMSSLNA 306
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL-KLEMDQKETCWPLD 267
+ +EAL + M PD + Y+ +I R L +A + ++EM + L
Sbjct: 307 QKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPE------LG 360
Query: 268 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL----PDSVSYCLLLNGL 323
N S T++S++ YC D+ + A++L + + PD +Y LL
Sbjct: 361 VSINTS---------TYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 324 HKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
K+ +LL + H L++ Y LI++
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDES-TYTFLIQR 446
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 45/196 (22%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +TY T++S+ N + + + +M P+ Y C+I R
Sbjct: 292 PNSITYTTIMSSL-------NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Query: 64 VEEAVGILRL-MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI-FPDVHAY 121
+EEA + R+ M E G+S + +Y+ +I+ +C + E KA+E+ EM + PDVH Y
Sbjct: 345 LEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 122 ------------------------------------GLLIQLLCHQRRLLEARDLFQEML 145
LIQ LC A LF+EM+
Sbjct: 405 QPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMI 464
Query: 146 LRGMSPGGRTYDTLVE 161
+ ++P RT L+E
Sbjct: 465 SQDITPRHRTCLLLLE 480
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 146/336 (43%), Gaps = 31/336 (9%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 88
+ R+ E +M +L T + M R F EEAVGI + E GL + +S +
Sbjct: 137 WDRMKEFVERMRGDKLVTLNTVAKIM-RRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNL 195
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
++ CK K + +A + ++ L I P+ H + + I C R+ EA QEM G
Sbjct: 196 LLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
P +Y T++ YC + EF KV+ + E+ G P+ +TY ++ L
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG--------SPPNSITYTTIMSSLNA 306
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL-KLEMDQKETCWPLD 267
+ +EAL + M PD + Y+ +I R L +A + ++EM + L
Sbjct: 307 QKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPE------LG 360
Query: 268 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL----PDSVSYCLLLNGL 323
N S T++S++ YC D+ + A++L + + PD +Y LL
Sbjct: 361 VSINTS---------TYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 324 HKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK 359
K+ +LL + H L++ Y LI++
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDES-TYTFLIQR 446
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 45/196 (22%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +TY T++S+ N + + + +M P+ Y C+I R
Sbjct: 292 PNSITYTTIMSSL-------NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Query: 64 VEEAVGILRL-MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI-FPDVHAY 121
+EEA + R+ M E G+S + +Y+ +I+ +C + E KA+E+ EM + PDVH Y
Sbjct: 345 LEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 122 ------------------------------------GLLIQLLCHQRRLLEARDLFQEML 145
LIQ LC A LF+EM+
Sbjct: 405 QPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMI 464
Query: 146 LRGMSPGGRTYDTLVE 161
+ ++P RT L+E
Sbjct: 465 SQDITPRHRTCLLLLE 480
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V +N ++ + K + ++L+H M + PN +Y MIR FC ++
Sbjct: 331 PDIVAHNVMLEGLLRSMKKSD-------AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E A+ M + GL P A Y+ +I+ F K++ E+ EM +KG PD Y
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI+L+ +Q+ ++ +M+ + P T++ ++++Y + + + DE+I+KG
Sbjct: 444 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P +Y LI GL + EA L M + + + Y+ + F R
Sbjct: 504 IC--------PDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 135/306 (44%), Gaps = 30/306 (9%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +TY L++ C NL + +++ M L P+ + M+ +
Sbjct: 296 PNMMTYTVLLNGWCRV---RNL----IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 348
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+A+ + +M KG P+ SY+ +I FCK M A+E +M+D G+ PD Y
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI Q++L +L +EM +G P G+TY+ L++ + + +++IQ
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ-- 466
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
PS+ T+N ++ + + + M + + PD+ SY+ +I G
Sbjct: 467 ------NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG--- 517
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
L E +E C L++ ++ + L +++ F++ D+ + E+ +L
Sbjct: 518 ---------LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAA---DFHRGGQPEIFEEL 565
Query: 304 RYQAQY 309
+A++
Sbjct: 566 AQRAKF 571
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 183/451 (40%), Gaps = 54/451 (11%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
TYN+++S + + + +V + +M + L ET + ++ F ++A
Sbjct: 197 TYNSMMSILAKTRQ-------FETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKERKKA 248
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
VGI LM + ++ + ++ + K +GK ++ + L + P++ Y +L+
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 128 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL---KGEFSKVFHLQDEVIQKGF 184
C R L+EA ++ +M+ G+ P ++ ++E K + K+FH + K
Sbjct: 308 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-----VMKSK 362
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
P P++ +Y +I C + A+E M + L PD Y+ +I+GF
Sbjct: 363 GP------CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 304
++L +EL EM +K P D T +L+K ++N E + K+
Sbjct: 417 KKLDTVYELLKEMQEKGH--PPDGKTYNALIKLMANQKM---------PEHGTRIYNKM- 464
Query: 305 YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNE 364
Q + P ++ +++ Y VA + ++D +I+K +
Sbjct: 465 IQNEIEPSIHTFNMIMKS----------------YFVARNYEM-GRAVWDEMIKKGICPD 507
Query: 365 FKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYK 424
S L++G G EA R + ML + + YN D GG ++ +
Sbjct: 508 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 567
Query: 425 EMLHYG--FVCHMFSVLALIKALYCDERYNE 453
G +F+ A + C +R+ E
Sbjct: 568 RAKFSGKFAAAEIFARWAQMTRRRCKQRFME 598
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/427 (18%), Positives = 167/427 (39%), Gaps = 63/427 (14%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIIS 91
++L H + V L + R FC AE+ G + + +Y+ ++S
Sbjct: 157 LDLSHDLIVEVLERFRHARKPAFRFFC-------------WAAERQGFAHASRTYNSMMS 203
Query: 92 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 151
K ++ + + EM KG+ + + + ++ + +A +F+ M
Sbjct: 204 ILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262
Query: 152 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 211
G T + L+++ + L D++ ++ F+P+++TY L++G C +
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKER---------FTPNMMTYTVLLNGWCRVRN 313
Query: 212 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL--EMDQKETCWPLDQD 269
EA I M + L PD V+++ ++ G +R ++K+ +KL M K C
Sbjct: 314 LIEAARIWNDMIDHGLKPDIVAHNVMLEGL--LRSMKKSDAIKLFHVMKSKGPC------ 365
Query: 270 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKK 326
N +++ ++ D+C + E A++ + PD+ Y L+ G
Sbjct: 366 ---------PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG---- 412
Query: 327 ATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAAR 386
F T+ L + Y + + EK + K+ L+K + + R
Sbjct: 413 ----FGTQKKLDTV---------YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTR 459
Query: 387 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 446
+ M+ P +N+++ + + N ++ EM+ G S LI+ L
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 519
Query: 447 CDERYNE 453
+ + E
Sbjct: 520 SEGKSRE 526
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+N LI+ C + K + ++L+ +M + PN ++ +IR F +
Sbjct: 226 PDVCTFNILINGYCRSSK-------FDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+EE V + M E G + ++ C+ + A + +++L+K + P YG
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L++ LC + + + A ++ +E+ +G +P TLVE G K ++++ G
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
L P VT+N L+ LC +A + +PDE +Y ++SGF +
Sbjct: 399 IL--------PDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTK 450
Query: 244 IRELRKAFELKLEMDQKE 261
++ L EM K+
Sbjct: 451 EGRRKEGEVLVNEMLDKD 468
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 38/307 (12%)
Query: 48 ETTYRCMIRLFCDRNRVEEAV----GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
E +R I +C +++ A+ + RL+ K P+ Y+ +++ + K+ +M KAL
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGK---PNVGVYNTVVNGYVKSGDMDKAL 213
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
M + PDV + +LI C + A DLF+EM +G P +++TL+ +
Sbjct: 214 RFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGF 273
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
G+ + + E+I+ G FS + T L+ GLC R D+A ++ +
Sbjct: 274 LSSGKIEEGVKMAYEMIELG------CRFSEA--TCEILVDGLCREGRVDDACGLVLDLL 325
Query: 224 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK--ETCWPLDQDTNESLVKD---- 277
+ P E Y +++ + +A E+ E+ +K C+ E L K
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE 385
Query: 278 --------------LSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLL 320
L + TF+ L+ D C+ D + A +LR A Y PD +Y +L+
Sbjct: 386 KASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLV 445
Query: 321 NGLHKKA 327
+G K+
Sbjct: 446 SGFTKEG 452
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 143/353 (40%), Gaps = 51/353 (14%)
Query: 125 IQLLCHQRRLLEARDLFQEM--LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
I C R++ A F M L+ G P Y+T+V Y G+ K + ++
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKE 222
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
P + T+N LI+G C + D AL++ R M E +P+ VS++ +I GF
Sbjct: 223 --------RAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFL 274
Query: 243 RIRELRKAFELKLEMDQ------KETCWPLDQ--------DTNESLVKDLSNHDT----- 283
++ + ++ EM + + TC L D LV DL N
Sbjct: 275 SSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEF 334
Query: 284 -FSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFY 339
+ SLV C E+KA A+++ ++ P ++ L+ GL K + A+ +
Sbjct: 335 DYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Query: 340 IVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 399
+ A L P + +++L+ +++ + +A R R + Y P+
Sbjct: 395 MNAGIL--PDSVTFNLLLRDLCSSDHST---------------DANRLRLLASSKGYEPD 437
Query: 400 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYN 452
Y++L+ G + + EML + +F+ L+ L C +++
Sbjct: 438 ETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P+E Y ++ C N+ A+ ++ + +KG +P + + ++ K+ KA
Sbjct: 331 PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGF 390
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
+M++ GI PD + LL++ LC +A L +G P TY LV +
Sbjct: 391 MEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTK 450
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 206
+G + L +E++ K L P + TYN L+ GL
Sbjct: 451 EGRRKEGEVLVNEMLDKDML--------PDIFTYNRLMDGL 483
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 7/168 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P Y +L+ C K VR +E+ ++ + +P ++ R
Sbjct: 331 PSEFDYGSLVEKLCGENK-------AVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGR 383
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E+A G + M G+ P + +++ ++ C + A +++ KG PD Y +
Sbjct: 384 TEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV 443
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 171
L+ + R E L EML + M P TY+ L++ G+FS+
Sbjct: 444 LVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 51/286 (17%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE-LSPNETTYRCMIRLFCDRN 62
P+ +TY+TL+ ++ VEL+ M +E +SP+ T+ MI FC
Sbjct: 230 PNSITYSTLMDCLFAHSRSK-------EAVELFEDMISKEGISPDPVTFNVMINGFCRAG 282
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
VE A IL M + G +P+ +YS +++ FCK ++ +A + E+ G+ D Y
Sbjct: 283 EVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYT 342
Query: 123 LLIQLLCHQRRLLEARDLFQEM--------------LLRGMSPGGR-------------- 154
L+ C EA L EM +LRG+S GR
Sbjct: 343 TLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSE 402
Query: 155 -------TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 207
+Y ++ A C GE K + ++G P++ T+N L+ LC
Sbjct: 403 GVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHH--------ATWNELVVRLC 454
Query: 208 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
+ + +L G + L P S+ AV+ + R+L FEL
Sbjct: 455 ESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFEL 500
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 78 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLE 136
GL P+ ++ ++ CKN ++ A + EM GI +P+ Y L+ L R E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 137 ARDLFQEMLLR-GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 195
A +LF++M+ + G+SP T++ ++ +C GE + + D + + G +P+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC--------NPN 302
Query: 196 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 255
+ Y+AL++G C + EA + + + L D V Y+ +++ F R E +A +L
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 256 EM 257
EM
Sbjct: 363 EM 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/141 (19%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +TYN ++ ++ +++ Q + N+ +YR ++ C +
Sbjct: 372 DTLTYNVILRGLSSEGRSE-------EALQMLDQWGSEGVHLNKGSYRIILNALCCNGEL 424
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
E+AV L +M+E+G+ PH +++ ++ R C++ + + + L G+ P ++G +
Sbjct: 425 EKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAV 484
Query: 125 IQLLCHQRRLLEARDLFQEML 145
++ +C +R+L+ +L ++
Sbjct: 485 VESICKERKLVHVFELLDSLV 505
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 15/236 (6%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D VTYN +++ C ++ + +E+ +M R ++PN TTY M++ F ++
Sbjct: 194 DTVTYNVILNGWCLIKRT-------PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
A M ++ +Y+ ++ F E+ +A + EM+ +G+ P V Y +
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
IQ+LC + + A +F+EM+ RG P TY+ L+ GEFS+ L + +G
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG- 365
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
P+ TYN +I ++AL + M P+ +Y+ +ISG
Sbjct: 366 -------CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 135/294 (45%), Gaps = 31/294 (10%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D ++NT++ C++++ + EL+ + R S + TY ++ +C R
Sbjct: 160 DLASFNTILDVLCKSKRVE-------KAYELFRALRGR-FSVDTVTYNVILNGWCLIKRT 211
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+A+ +L+ M E+G++P+ +Y+ ++ F + ++ A E +EM + DV Y +
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
+ + AR++F EM+ G+ P TY+ +++ C K + +E++++G
Sbjct: 272 VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG- 330
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
+ P++ TYN LI GL E+++ M +P+ +Y+ +I +
Sbjct: 331 -------YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAE 298
E+ KA L +M + C P N DT++ L++ ++E
Sbjct: 384 SEVEKALGLFEKMGSGD-CLP--------------NLDTYNILISGMFVRKRSE 422
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 119/249 (47%), Gaps = 29/249 (11%)
Query: 79 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 138
+ P +++ + R+ + KA+++ + M + G F D+ ++ ++ +LC +R+ +A
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 139 DLFQEMLLRG-MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 197
+LF+ LRG S TY+ ++ +CL K + E++++G +P+L
Sbjct: 182 ELFRA--LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG--------INPNLT 231
Query: 198 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 257
TYN ++ G + A E M + + D V+Y+ V+ GF E+++A +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV---- 287
Query: 258 DQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSV 314
D+ E ++ ++ T+++++ C +D E A+ + + Y P+
Sbjct: 288 --------FDEMIREGVLPSVA---TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVT 336
Query: 315 SYCLLLNGL 323
+Y +L+ GL
Sbjct: 337 TYNVLIRGL 345
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P TYN +I C+ + N V ++ +M R PN TTY +IR
Sbjct: 298 PSVATYNAMIQVLCKKDNVEN-------AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+++ M +G P+ +Y+ +I + + E+ KAL + +M P++ Y +
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 124 LIQLLCHQRR----LLEARDLFQEMLLRGMSPGG 153
LI + ++R ++ F + +LR S G
Sbjct: 411 LISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSG 444
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 14/235 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P +TYNT+I+A + + ++ L+ +M + P+ TY ++ R
Sbjct: 209 PSILTYNTVINACARG------GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+EA + R M + G+ P +YS ++ F K + + K ++ EM G PD+ +Y +
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L++ + EA +F +M G +P TY L+ + G + V L
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL-------- 374
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
FL ++ P TYN LI E + + M E ++PD +Y +I
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 169/427 (39%), Gaps = 50/427 (11%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVEM 109
+ + + F R + ++ + + M + P+ Y+ +IS + + K LE+ EM
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG-- 167
+G+ V +Y LI R + +L M +SP TY+T++ A C +G
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGL 226
Query: 168 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 227
++ + L E+ +G P +VTYN L+ DEA + R M + +
Sbjct: 227 DWEGLLGLFAEMRHEGI--------QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 228 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSL 287
PD +YS ++ F ++R L K +L EM + L + +++ L
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS---------------LPDITSYNVL 323
Query: 288 VNDYCAEDKAEMALKLRYQAQY---LPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHC 344
+ Y + A+ + +Q Q P++ +Y +LLN + + R+ LF +
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ--SGRYDDVRQLFLEMKSS 381
Query: 345 LTIPSYIIYDILIEKCANNE-FKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 403
T P Y+ILIE FK VV L M+ N P+ Y
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFH----------------DMVEENIEPDMETY 425
Query: 404 NLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLR 463
+IF GG A + + M V + +I+A Y E + V NT+
Sbjct: 426 EGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEE-ALVAFNTMH 484
Query: 464 SCNLNDS 470
N S
Sbjct: 485 EVGSNPS 491
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 160/373 (42%), Gaps = 69/373 (18%)
Query: 4 PDCVTYNTLISAAC------EAEK-----NHNLSIP----YVRIVELYHQM--------C 40
PD VTYNTL+SA EAE N +P Y +VE + ++
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 41 VRELS-----PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
+ E++ P+ T+Y ++ + ++EA+G+ M G +P+A++YS +++ F +
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
+ ++ +EM PD Y +LI++ E LF +M+ + P T
Sbjct: 365 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 156 YDTLVEAYCLKGEF-------------------SKVFHLQDEVIQK---------GFLPY 187
Y+ ++ A C KG SK + E + F
Sbjct: 425 YEGIIFA-CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 188 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 247
+ +PS+ T+++L++ E+ IL + + + + +++A I +++ +
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 248 RKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA 307
+A + ++M +K C P D+ T E+++ S F+ LV D C E EM +
Sbjct: 544 EEAVKTYVDM-EKSRCDP-DERTLEAVLSVYS----FARLV-DECREQFEEMK-----AS 591
Query: 308 QYLPDSVSYCLLL 320
LP + YC++L
Sbjct: 592 DILPSIMCYCMML 604
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 158/405 (39%), Gaps = 50/405 (12%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV--EEAVGILRLMAEKGLSPHADSY 86
Y +EL +M ++SP+ TY +I C R + E +G+ M +G+ P +Y
Sbjct: 192 YETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTY 250
Query: 87 SRIISRFCKNKEMGKALEMKVE-MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 145
+ ++S C + +G EM M D GI PD+ Y L++ RRL + DL EM
Sbjct: 251 NTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 146 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 205
G P +Y+ L+EAY G + + F +P+ TY+ L++
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGV--------FHQMQAAGCTPNANTYSVLLNL 361
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
R D+ ++ M DPD +Y+ +I F ++ L +M
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM-------- 413
Query: 266 LDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 325
E++ D+ ++ + A L+ +P S +Y ++ +
Sbjct: 414 ----VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 326 KATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA- 384
A L + + ++ + E +N ++ L+ F GLV E+
Sbjct: 470 AA-----------------LYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512
Query: 385 ---ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
+R D+ + RN +N I + GG +A Y +M
Sbjct: 513 AILSRLVDSGIPRNRD----TFNAQIEAYKQGGKFEEAVKTYVDM 553
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
TDPD TYN LI E + +V L+H M + P+ TY +I C +
Sbjct: 383 TDPDAATYNILIEVFGEGGY-------FKEVVTLFHDMVEENIEPDMETYEGII-FACGK 434
Query: 62 NRV-EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+ E+A IL+ M + P + +Y+ +I F + +AL M + G P +
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
+ L+ + E+ + ++ G+ T++ +EAY G+F +
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 35/275 (12%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
+ + YNTL+ A +N S + L+ +M + L P+ TY ++ + R +
Sbjct: 378 NTIVYNTLMDA-------YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQP 430
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK-ALEMKVEMLDKGIFPDVHAYGL 123
+ +LR M + GL P+ SY+ +IS + + K+M A + + M G+ P H+Y
Sbjct: 431 DIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTA 490
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD----EV 179
LI +A F+EM G+ P TY ++++A+ G+ K+ + E
Sbjct: 491 LIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREK 550
Query: 180 IQKGFLPY------------------YVTSFS-----PSLVTYNALIHGLCFFQRPDEAL 216
I+ + Y V+ FS PS++TYN L++ + +
Sbjct: 551 IKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLP 610
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 251
++L+ M + L PD ++YS +I F R+R+ ++AF
Sbjct: 611 QLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF 645
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VT LI+ +A ++ + E++ +M + + ++ + +++ FCD
Sbjct: 306 PDNVTCAILITTLRKAGRSAK------EVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGL 359
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
EEA+ I M +KG+ + Y+ ++ + K+ + + + EM DKG+ P Y +
Sbjct: 360 KEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNI 419
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ + + L +EM G+ P ++Y L+ AY + S ++
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMS-------DMAADA 472
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
FL PS +Y ALIH ++A M + + P +Y++V+ FRR
Sbjct: 473 FLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRR 532
Query: 244 IRELRKAFEL 253
+ K E+
Sbjct: 533 SGDTGKLMEI 542
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 131/325 (40%), Gaps = 55/325 (16%)
Query: 199 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI-RELRKAFELKLEM 257
YNA I GL QR D+A E+ M ++ + PD V+ + +I+ R+ R ++ +E+ +M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 258 DQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSV 314
+K W + D F LV +C E E AL ++ + + +++
Sbjct: 336 SEKGVKW---------------SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTI 380
Query: 315 SYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVEL--- 371
Y L++ +K ++ LF + PS Y+IL++ A +VE
Sbjct: 381 VYNTLMDAYNK--SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLR 438
Query: 372 ----------VKGF--------RMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG 413
VK + R + + + AA A M +P Y LI + +
Sbjct: 439 EMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 414 GNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQL 473
G KAY ++EM G + + +++ A R + + L + +L
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAF-------------RRSGDTGKLMEIWKL 545
Query: 474 KILDEIDPERCIIYALLDVLAEKAM 498
+ ++I R LLD A++ +
Sbjct: 546 MLREKIKGTRITYNTLLDGFAKQGL 570
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ +Y LISA +K +++ + + +M L P+ +Y +I +
Sbjct: 446 EPNVKSYTCLISAYGRTKKMSDMA------ADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
E+A M ++G+ P ++Y+ ++ F ++ + GK +E+ ML + I Y
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN 559
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSP--------------GGR-------------- 154
L+ Q +EARD+ E G+ P GG+
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL 619
Query: 155 -------TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
TY T++ A+ +F + F +++ G +P
Sbjct: 620 NLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 15/250 (6%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
+PD TYNTLISA C+ K + +L+ M ++P++ +Y+ +I+ C
Sbjct: 331 VNPDVFTYNTLISALCKEGK-------FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIH 383
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
V A L M + L P ++ +I + + + AL + ML G+ P+V+
Sbjct: 384 GDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTN 443
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
LI RL++A + EM + P TY+ L+ A C G F L DE+++
Sbjct: 444 NALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR 503
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+G P ++TY L+ GLC+ R +A +L + + D V + + +
Sbjct: 504 RGC--------QPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKY 555
Query: 242 RRIRELRKAF 251
R++ +A+
Sbjct: 556 TRLQRPGEAY 565
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 14/258 (5%)
Query: 21 KNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLS 80
KN N+ V+ +E++ +M + + + Y +IR C + A G + M ++G++
Sbjct: 277 KNGNV----VQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN 332
Query: 81 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 140
P +Y+ +IS CK + +A ++ M + G+ PD +Y ++IQ LC + A +
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 141 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 200
ML + P ++ +++ Y G+ S + + ++ G P++ T N
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG--------VKPNVYTNN 444
Query: 201 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
ALIHG R +A + M + PD +Y+ ++ + LR AF+L EM +
Sbjct: 445 ALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEM-LR 503
Query: 261 ETCWPLDQDTNESLVKDL 278
C P D T LV+ L
Sbjct: 504 RGCQP-DIITYTELVRGL 520
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 161/388 (41%), Gaps = 54/388 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+CV+YNTLI C +N+ + + L++ M + PN T ++ C +
Sbjct: 189 PNCVSYNTLIKGLCSV---NNVD----KALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 64 VEEAVGILR---LMAEKGLSPHADSYSRIISRFC-KNKEMGKALEMKVEMLDKGIFPDVH 119
+ L L + + +P I+ C KN + +ALE+ EM K + D
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
Y ++I+ LC ++ A +M+ RG++P TY+TL+ A C +G+F + L +
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
G +P ++Y +I GLC + A E L M + L P+ + ++ VI
Sbjct: 362 QNGG--------VAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVID 413
Query: 240 GFRRIRELRKA---FELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK 296
G+ R + A L L K + TN +L+ + L++ + +++
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVY-----TNNALIH---GYVKGGRLIDAWWVKNE 465
Query: 297 AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDIL 356
+ PD+ +Y LLL R A +L YD +
Sbjct: 466 MR-------STKIHPDTTTYNLLLGAACTLGHLRLAFQL-----------------YDEM 501
Query: 357 IEKCANNEFKSVVELVKGFRMRGLVNEA 384
+ + + + ELV+G +G + +A
Sbjct: 502 LRRGCQPDIITYTELVRGLCWKGRLKKA 529
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 175/422 (41%), Gaps = 48/422 (11%)
Query: 49 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 108
+ + ++R C + +++ A+ + + M G+ P +++ +++ CK + KA + E
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 109 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 168
M + G P+ +Y LI+ LC + +A LF M G+ P T + +V A C KG
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 169 F-SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ-RPDEALEILRGMPEML 226
+ L +E++ + +P + ++ CF +ALE+ + M +
Sbjct: 242 IGNNNKKLLEEILDSS------QANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKN 295
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD--TF 284
+ D V Y+ +I G + A+ +M VK N D T+
Sbjct: 296 VPADSVVYNVIIRGLCSSGNMVAAYGFMCDM-----------------VKRGVNPDVFTY 338
Query: 285 SSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFAT-------- 333
++L++ C E K + A L Q PD +SY +++ GL A
Sbjct: 339 NTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLK 398
Query: 334 -----RLLLFYIVA-----HCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNE 383
+LL+ +V + T + + ++++ + L+ G+ G + +
Sbjct: 399 SSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID 458
Query: 384 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 443
A ++ M P+ YNLL+ C G++ A+ +Y EML G + + L++
Sbjct: 459 AWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVR 518
Query: 444 AL 445
L
Sbjct: 519 GL 520
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 117/300 (39%), Gaps = 72/300 (24%)
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 215
+ +++ CL+G+ L+ ++I G +P L+T+N L++GLC ++A
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIP--------GLITHNHLLNGLCKAGYIEKA 175
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
++R M EM P+ VSY+ +L+
Sbjct: 176 DGLVREMREMGPSPNCVSYN-------------------------------------TLI 198
Query: 276 KDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRL 335
K L + VN+ DKA + P+ V+ ++++ L +K +
Sbjct: 199 KGLCS-------VNNV---DKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 336 LLFYIV--AHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLH 393
LL I+ + +I IL++ C N G V +A M
Sbjct: 249 LLEEILDSSQANAPLDIVICTILMDSCFKN---------------GNVVQALEVWKEMSQ 293
Query: 394 RNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
+N + VYN++I C GN+ AY +M+ G +F+ LI AL + +++E
Sbjct: 294 KNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD TYN +I CE+ + +M + + PN +++ MI F +
Sbjct: 184 EPDLETYNRMIKVFCESGS-------ASSSYSIVAEMERKGIKPNSSSFGLMISGFYAED 236
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ +E +L +M ++G++ +Y+ I CK K+ +A + ML G+ P+ Y
Sbjct: 237 KSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS 296
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI C++ EA+ LF+ M+ RG P Y TL+ C G+F L E ++K
Sbjct: 297 HLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
++P SFS +L++GL + +EA E++ + E
Sbjct: 357 NWVP----SFS----IMKSLVNGLAKDSKVEEAKELIGQVKE 390
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 130/303 (42%), Gaps = 30/303 (9%)
Query: 7 VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEE 66
+T NTLI + +++ + + +Y + + PNE T R MI++ C R++E
Sbjct: 200 ITLNTLIHYSSKSKIDD-------LVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKE 252
Query: 67 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 126
V +L + K P + ++ R + + +++ + +L K + D Y +++
Sbjct: 253 VVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVY 312
Query: 127 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
+ L+ AR +F EML RG S Y V C KG+ + L E+ + G P
Sbjct: 313 AKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSP 372
Query: 187 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 246
Y T+N LI G F ++ LE M L P +++ ++ +I
Sbjct: 373 YD--------ETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIEN 424
Query: 247 LRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ 306
+ +A E+ L + ++ V D T+S L+ + + + ALKL Y+
Sbjct: 425 VNRANEI------------LTKSIDKGFVPD---EHTYSHLIRGFIEGNDIDQALKLFYE 469
Query: 307 AQY 309
+Y
Sbjct: 470 MEY 472
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
+++ +M R S N Y +R+ C++ V+EA +L M E G+SP+ ++++ +I F
Sbjct: 325 KVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGF 384
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
+ K LE M+ +G+ P A+ +++ + + A ++ + + +G P
Sbjct: 385 ARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDE 444
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
TY L+ + + + L F SP + +LI GLC + +
Sbjct: 445 HTYSHLIRGFIEGNDIDQALKL--------FYEMEYRKMSPGFEVFRSLIVGLCTCGKVE 496
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 257
+ L+ M + L++P+ Y A+I F++I + A + EM
Sbjct: 497 AGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%)
Query: 39 MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 98
M R L P+ + + M++ V A IL +KG P +YS +I F + +
Sbjct: 400 MVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGND 459
Query: 99 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 158
+ +AL++ EM + + P + LI LC ++ + M R + P YD
Sbjct: 460 IDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDA 519
Query: 159 LVEAYCLKGEFSKVFHLQDEVI 180
L++A+ G+ + + +E+I
Sbjct: 520 LIKAFQKIGDKTNADRVYNEMI 541
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 39/321 (12%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD + L+ A C+ S + + E + PN + ++ +C
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDMRE--------KFPPNLRYFTSLLYGWCREG 250
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ EA +L M E GL P ++ ++S + +M A ++ +M +G P+V+ Y
Sbjct: 251 KLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYT 310
Query: 123 LLIQLLCH-QRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+LIQ LC ++R+ EA +F EM G TY L+ +C G K + + D++ +
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
KG +P S VTY ++ ++ +E LE++ M PD + Y+ VI
Sbjct: 371 KGVMP--------SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLA 422
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQ-------DTNESLVKDLSNH------------- 281
++ E+++A L EM+ +D T++ + + NH
Sbjct: 423 CKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAP 482
Query: 282 --DTFSSLVNDYCAEDKAEMA 300
T SL+N+ +DK EMA
Sbjct: 483 QYGTLKSLLNNLVRDDKLEMA 503
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 9/235 (3%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
+ VE+ +M L P+E + C++ C V+EA + M EK P+ ++ ++
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLL 243
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
+C+ ++ +A E+ V+M + G+ PD+ + L+ H ++ +A DL +M RG
Sbjct: 244 YGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFE 303
Query: 151 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 210
P Y L++A C + DE + + F+ +VTY ALI G C +
Sbjct: 304 PNVNCYTVLIQALC------RTEKRMDEAM-RVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 211 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
D+ +L M + + P +V+Y ++ + + + EL +E ++ C P
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLEL-IEKMKRRGCHP 410
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 10/208 (4%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 113
++R F N V++AV +L M + GL P + ++ CKN + +A ++ +M +K
Sbjct: 173 LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK- 231
Query: 114 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
P++ + L+ C + +L+EA+++ +M G+ P + L+ Y G+ + +
Sbjct: 232 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 291
Query: 174 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ-RPDEALEILRGMPEMLLDPDEV 232
L +++ ++G F P++ Y LI LC + R DEA+ + M + D V
Sbjct: 292 DLMNDMRKRG--------FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343
Query: 233 SYSAVISGFRRIRELRKAFELKLEMDQK 260
+Y+A+ISGF + + K + + +M +K
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKK 371
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 8/155 (5%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +N+LI A C+A + N + + +M + ++PN + ++R +R
Sbjct: 341 DVAVFNSLIGAFCKANRMKN-------VYRVLKEMKSKGVTPNSKSCNIILRHLIERGEK 393
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+EA + R M K P AD+Y+ +I FC+ KEM A ++ M KG+FP +H + +L
Sbjct: 394 DEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVL 452
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 159
I LC +R +A L +EM+ G+ P G T+ L
Sbjct: 453 INGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 34/298 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V +N L+SA C K+ N+ + E++ M R +P+ TY ++ +
Sbjct: 201 PNLVAFNGLLSALC---KSKNVR----KAQEVFENMRDR-FTPDSKTYSILLEGWGKEPN 252
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI-FPDVHAYG 122
+ +A + R M + G P +YS ++ CK + +AL + V +D I P Y
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI-VRSMDPSICKPTTFIYS 311
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+L+ + RL EA D F EM GM +++L+ A+C V+ + E+ K
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK 371
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G +P+ + N ++ L DEA ++ R M + + +PD +Y+ VI
Sbjct: 372 G--------VTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVI---- 418
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 300
K F K EM+ + W + + TFS L+N C E + A
Sbjct: 419 ------KMFCEKKEMETADKVWKYMRKKGV-----FPSMHTFSVLINGLCEERTTQKA 465
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 144/312 (46%), Gaps = 31/312 (9%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 106
N T+ ++R + +V+EA+ +M + L P+ +++ ++S CK+K + KA E+
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
M D+ PD Y +L++ + L +AR++F+EM+ G P TY +V+ C
Sbjct: 227 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G + I + P + P+ Y+ L+H R +EA++ M
Sbjct: 286 GRVDEALG-----IVRSMDP---SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG 337
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK------ETCWPLDQDTNESLVKDLS- 279
+ D ++++I F + ++ + + EM K ++C + + E KD +
Sbjct: 338 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 397
Query: 280 ------------NHDTFSSLVNDYCAEDKAEMALKL-RY--QAQYLPDSVSYCLLLNGLH 324
+ DT++ ++ +C + + E A K+ +Y + P ++ +L+NGL
Sbjct: 398 DVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLC 457
Query: 325 KKATSRFATRLL 336
++ T++ A LL
Sbjct: 458 EERTTQKACVLL 469
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 58/279 (20%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TY+ L+ K NL P R E++ +M P+ TY M+ + C R
Sbjct: 235 PDSKTYSILLEGWG---KEPNL--PKAR--EVFREMIDAGCHPDIVTYSIMVDILCKAGR 287
Query: 64 VEEAVGILRL-----------------------------------MAEKGLSPHADSYSR 88
V+EA+GI+R M G+ ++
Sbjct: 288 VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNS 347
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
+I FCK M + EM KG+ P+ + ++++ L + EA D+F++M ++
Sbjct: 348 LIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKV 406
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
P TY +++ +C K E + + +KG PS+ T++ LI+GLC
Sbjct: 407 CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF--------PSMHTFSVLINGLCE 458
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 247
+ +A +L M EM + P V+ F R+R+L
Sbjct: 459 ERTTQKACVLLEEMIEMGIRPSGVT-------FGRLRQL 490
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 15/241 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+ D +YNTL+ A C K + + + E+ QM V+ + PN +Y +I F
Sbjct: 371 EQDVFSYNTLLDAIC---KGGQMDLAF----EILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R +EA+ + M G++ SY+ ++S + K +AL++ EM GI DV Y
Sbjct: 424 RFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYN 483
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+ Q + E + +F EM + P TY TL++ Y G + + +
Sbjct: 484 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI------- 536
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
F + +V Y+ALI LC A+ ++ M + + P+ V+Y+++I F
Sbjct: 537 -FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Query: 243 R 243
R
Sbjct: 596 R 596
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 27/241 (11%)
Query: 4 PDCVTYNTLISAAC------EAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRL 57
PD +T+N+L+ A C EA +N L+ +M R + + +Y ++
Sbjct: 337 PDRITFNSLL-AVCSRGGLWEAARN------------LFDEMTNRRIEQDVFSYNTLLDA 383
Query: 58 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 117
C +++ A IL M K + P+ SYS +I F K +AL + EM GI D
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 118 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 177
+Y L+ + R EA D+ +EM G+ TY+ L+ Y +G++ +V +
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 178 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 237
E+ ++ L P+L+TY+ LI G EA+EI R L D V YSA+
Sbjct: 504 EMKREHVL--------PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 238 I 238
I
Sbjct: 556 I 556
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTYN +I A + + + ++ + + +M + P+ T+ ++ + C R
Sbjct: 301 PNLVTYNAVIDACGKG------GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAV-CSRGG 353
Query: 64 VEEAV-GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ EA + M + + SY+ ++ CK +M A E+ +M K I P+V +Y
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+I R EA +LF EM G++ +Y+TL+ Y G + + E+
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G +VTYNAL+ G + DE ++ M + P+ ++YS +I G+
Sbjct: 474 G--------IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Query: 243 RIRELRKAFEL 253
+ ++A E+
Sbjct: 526 KGGLYKEAMEI 536
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 153/362 (42%), Gaps = 46/362 (12%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK-EMGKALEMKVEM 109
+ +I + EEA+ + M E GL P+ +Y+ +I K E + + EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEA-RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 168
G+ PD + L+ + C + L EA R+LF EM R + +Y+TL++A C G+
Sbjct: 331 QRNGVQPDRITFNSLLAV-CSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 169 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 228
F + ++ K +P ++V+Y+ +I G R DEAL + M + +
Sbjct: 390 MDLAFEILAQMPVKRIMP--------NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 229 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLV 288
D VSY+ ++S + ++ +A ++ EM + + KD+ T+++L+
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREM------------ASVGIKKDVV---TYNALL 486
Query: 289 NDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCL 345
Y + K + K+ + + LP+ ++Y L++G K + A + + A
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 346 TIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNL 405
++Y LI+ N GLV A D M P YN
Sbjct: 547 A--DVVLYSALIDALCKN---------------GLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 406 LI 407
+I
Sbjct: 590 II 591
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 130/326 (39%), Gaps = 57/326 (17%)
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G + KV + ++ F + + ++ ++ALI +EA+ + M E
Sbjct: 244 GRYGKV-----TIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 227 LDPDEVSYSAVISG-------FRRIREL------------RKAFELKLEMDQKETCWP-- 265
L P+ V+Y+AVI F+++ + R F L + + W
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 266 ---LDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLL 319
D+ TN + +D+ +++T L++ C + ++A ++ Q + +P+ VSY +
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNT---LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 320 LNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIY-----------------DILIEKCAN 362
++G K RF L LF + + + Y DIL E +
Sbjct: 416 IDGFAKAG--RFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 363 NEFKSVV---ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 419
K VV L+ G+ +G +E + M + P Y+ LI + GG +A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 420 YDMYKEMLHYGFVCHMFSVLALIKAL 445
++++E G + ALI AL
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDAL 559
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 189/509 (37%), Gaps = 90/509 (17%)
Query: 6 CVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVE 65
CV Y I C N I Y + L + + S YR ++R C R+E
Sbjct: 252 CVFYLNFIEGLC---LNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIE 308
Query: 66 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK------------- 112
+A ++ M + G+ P YS II KN + KA+++ +ML K
Sbjct: 309 DAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSIL 368
Query: 113 ------GIFPDVH----------------AYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
G F + + Y + L ++ EA +LF+EM +G++
Sbjct: 369 QCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIA 428
Query: 151 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 210
P Y TL+ CL+G+ S F L E+ G +P +V YN L GL
Sbjct: 429 PDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG--------KTPDIVIYNVLAGGLATNG 480
Query: 211 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 270
EA E L+ M + P V+++ VI G EL KA ++ K ++
Sbjct: 481 LAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS------REN 534
Query: 271 NESLVKDLS-----NH--------------DTFSSLVNDYCAE----DKAEMALKLRYQA 307
+ S+VK +H + +L CAE KA+ L ++
Sbjct: 535 DASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKL 594
Query: 308 QYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFK 366
P+ Y L+ + R A F I+ +P Y I+I C NE K
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKARE--FFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 367 SVVELVKGFRMRGLVNEAAR------------ARDTMLHRNYRPEGAVYNLLIFDHCIGG 414
L + + R + + + M + P+ Y ++I +C
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLN 712
Query: 415 NVHKAYDMYKEMLHYGFVCHMFSVLALIK 443
++ K Y ++K+M V + + L+K
Sbjct: 713 DLKKVYALFKDMKRREIVPDVVTYTVLLK 741
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 191/509 (37%), Gaps = 90/509 (17%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
+CV ++++ C+ N S Y +L+ + +S + Y +V
Sbjct: 360 NCVIVSSILQCYCQM---GNFSEAY----DLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EEA+ + R M KG++P +Y+ +I C + A ++ +EM G PD+ Y +L
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL--------- 175
L EA + + M RG+ P T++ ++E GE K
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR 532
Query: 176 -QDEVIQKGF-------------------LP--YYVTSFS-------------------- 193
D + KGF LP Y T F+
Sbjct: 533 ENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMW 592
Query: 194 -----PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELR 248
P Y LI C +A E + + PD +Y+ +I+ + R+ E +
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 249 KAFELKLEMDQKET-------CWPLDQDTNESLVKDLSNHDT------FSSLVNDYCAED 295
+A+ L +M +++ L+ D + +++ D ++ ++N YC +
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLN 712
Query: 296 ---KAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSR----FATRLLLFY----IVAHC 344
K K + + +PD V+Y +LL ++ SR F + +FY I C
Sbjct: 713 DLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQC 772
Query: 345 LTI---PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 401
+ I+D +IE + + L+ G + EA D M+ +P+
Sbjct: 773 KIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVV 832
Query: 402 VYNLLIFDHCIGGNVHKAYDMYKEMLHYG 430
Y LI C G V KA + KEML G
Sbjct: 833 PYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V Y +I+ C ++L ++ L+ M RE+ P+ TY +++ +RN
Sbjct: 696 PDVVYYTIMINRYCHL---NDLK----KVYALFKDMKRREIVPDVVTYTVLLKNKPERN- 747
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ R M + P Y+ +I CK ++G+A + +M++ G+ PD Y
Sbjct: 748 ------LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTA 801
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI C L EA+ +F M+ G+ P Y L+ C G K L E+++KG
Sbjct: 802 LIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Query: 184 FLPYYVTSFSPSLVTYNAL 202
P T S S V Y L
Sbjct: 862 IKP---TKASLSAVHYAKL 877
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 151/404 (37%), Gaps = 53/404 (13%)
Query: 53 CMIRLFCDRNRVEEAVGIL-RLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 111
+++ + + + +EA+ I R G +P + + +ISR + + E+
Sbjct: 151 ALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIER 210
Query: 112 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 171
G+ D H Y L++Q L E L +L+ Y +E CL
Sbjct: 211 LGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDI 270
Query: 172 VFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 231
+ L + L S + Y ++ GLC+ R ++A ++ M + +DPD
Sbjct: 271 AYFLLQPLRDANIL----VDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDV 326
Query: 232 VSYSAVISGFRRIRELRKA---FELKLEMDQKETCWPLD--------------------- 267
YSA+I G R+ + KA F L+ ++ C +
Sbjct: 327 YVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKE 386
Query: 268 -QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNG--LH 324
++TN SL + N F +L E+ E+ ++ + PD ++Y L+ G L
Sbjct: 387 FRETNISLDRVCYNV-AFDALGKLGKVEEAIELFREMTGKG-IAPDVINYTTLIGGCCLQ 444
Query: 325 KKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 384
K + F L + P +IY++L A N GL EA
Sbjct: 445 GKCSDAFD----LMIEMDGTGKTPDIVIYNVLAGGLATN---------------GLAQEA 485
Query: 385 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLH 428
M +R +P +N++I G + KA Y+ + H
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEH 529
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 139/318 (43%), Gaps = 35/318 (11%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
+++ +M R+ NE TY ++ + ++V+EAVG+ E G+ ++ ++
Sbjct: 164 QVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWL 223
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
C+ K + A E + D+ A +++ C + EA+ +++++ P
Sbjct: 224 CRYKHVEFA-ETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDV 282
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
+Y T++ A KG+ K L + + T +P + N +I LCF +R
Sbjct: 283 VSYGTMINALTKKGKLGKAMEL--------YRAMWDTRRNPDVKICNNVIDALCFKKRIP 334
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK-ETCWPLDQDTNE 272
EALE+ R + E DP+ V+Y++++ +IR K +EL EM+ K +C P D
Sbjct: 335 EALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSP--NDVTF 392
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMA-----LKLRYQAQY------------------ 309
S + S +V + A++K EM L R Q+
Sbjct: 393 SYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGL 452
Query: 310 LPDSVSYCLLLNGLHKKA 327
PD +Y + ++GLH K
Sbjct: 453 GPDQRTYTIRIHGLHTKG 470
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V+Y T+I+A + K + +ELY M +P+ +I C + R
Sbjct: 280 PDVVSYGTMINALTKKGK-------LGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKR 332
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG--------IF 115
+ EA+ + R ++EKG P+ +Y+ ++ CK + K E+ EM KG F
Sbjct: 333 IPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTF 392
Query: 116 P----------DVHA----------------YGLLIQLLCHQRRLLEARDLFQEMLLRGM 149
DV Y L+ +L + + R+++ EM G+
Sbjct: 393 SYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGL 452
Query: 150 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
P RTY + KG+ + E++ KG +P
Sbjct: 453 GPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
D D V ++ L+ C + +V E RE + ++ +C
Sbjct: 210 DDDLVAFHGLLMWLCRYK--------HVEFAETLFCSRRREFGCDIKAMNMILNGWCVLG 261
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
V EA + + P SY +I+ K ++GKA+E+ M D PDV
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+I LC ++R+ EA ++F+E+ +G P TY++L++ C KV+ L +E+ K
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 183 GFLPYYVTSFSPSLVTYNALI 203
G S SP+ VT++ L+
Sbjct: 382 G------GSCSPNDVTFSYLL 396
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVR--ELSPNETTYRCMIRLFCD 60
DP+ VTYN+L+ C+ + ++ EL +M ++ SPN+ T+ +++
Sbjct: 349 DPNVVTYNSLLKHLCKIRRTE-------KVWELVEEMELKGGSCSPNDVTFSYLLKY--- 398
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
R ++ +L MA+ +D Y+ + + + + K E+ EM G+ PD
Sbjct: 399 SQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRT 458
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
Y + I L + ++ EA FQEM+ +GM P RT
Sbjct: 459 YTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 19/263 (7%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
T P+ +N L+ A C+ V+ E + + P+ T+ + +C
Sbjct: 230 TQPEINAFNMLLDALCKC--------GLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRV 281
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF---PDV 118
++A+ +L M E G P +Y I FC+ + +A ++ M+ KG P
Sbjct: 282 RDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTA 341
Query: 119 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 178
+ L+I L + E +L M+ G P TY ++E C+ + + + DE
Sbjct: 342 KTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 179 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
+ KG+ P +VTYN + LC ++ DEAL++ M E P +Y+ +I
Sbjct: 402 MSNKGY--------PPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
Query: 239 SGFRRIRELRKAFELKLEMDQKE 261
S F + + AF EMD+++
Sbjct: 454 SMFFEMDDPDGAFNTWTEMDKRD 476
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 45 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
+P T+ MI ++ EE ++ M G P +Y +I C +++ +A +
Sbjct: 338 APTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYK 397
Query: 105 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
EM +KG PD+ Y +++LC R+ EA L+ M+ +P +TY+ L+ +
Sbjct: 398 FLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
Query: 165 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 219
+ F+ E+ ++ + + TY A+I+GL R EA +L
Sbjct: 458 EMDDPDGAFNTWTEMDKRDCV--------QDVETYCAMINGLFDCHRAKEACFLL 504
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYH---QMCVRELSPNETTYRCMIRLFCD 60
PD TY +I C AEK + E Y +M + P+ TY C +R+ C+
Sbjct: 374 PDVSTYKDVIEGMCMAEK----------VDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE 423
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+ +EA+ + M E +P +Y+ +IS F + + A EM + DV
Sbjct: 424 NRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVET 483
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 160
Y +I L R EA L +E++ +G+ R +D+ +
Sbjct: 484 YCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
EL +M P+ +TY+ +I C +V+EA L M+ KG P +Y+ +
Sbjct: 362 ELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVL 421
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
C+N++ +AL++ M++ P V Y +LI + A + + EM R
Sbjct: 422 CENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDV 481
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF-LPYYV 189
TY ++ + L +EV+ KG LPY V
Sbjct: 482 ETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRV 518
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 15/217 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTYNT+I A C + I+ ++ ++ P+ ++ ++ F R
Sbjct: 191 PDLVTYNTMIKALCRKGSMDD-------ILSIFEELEKNGFEPDLISFNTLLEEFYRREL 243
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E I LM K LSP+ SY+ + +NK+ AL + M +GI PDVH Y
Sbjct: 244 FVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNA 303
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI L E + EM +G++P TY L+ C KG+ + + +E I+
Sbjct: 304 LITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHK 363
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 220
L P++ Y ++ L + DEA ++++
Sbjct: 364 LLS------RPNM--YKPVVERLMGAGKIDEATQLVK 392
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVE 108
++ ++ + + +++EA+ + + EK G++P +Y+ +I C+ M L + E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 109 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 168
+ G PD+ ++ L++ + +E ++ M + +SP R+Y++ V +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 169 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 228
F+ +L D + +G SP + TYNALI +E ++ M E L
Sbjct: 279 FTDALNLIDVMKTEG--------ISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 229 PDEVSYSAVISGFRRIRELRKAFELKLE 256
PD V+Y +I + +L +A E+ E
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
Query: 85 SYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 143
S++ ++S + +K++ +A++ E+ +K GI PD+ Y +I+ LC + + + +F+E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 144 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 203
+ G P +++TL+E + + F + + D + K + SP++ +YN+ +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK--------NLSPNIRSYNSRV 270
Query: 204 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
GL ++ +AL ++ M + PD +Y+A+I+ +R L + + EM +K
Sbjct: 271 RGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 118 VHAYGLLIQLLCHQRRLLEARDLFQEMLLR-GMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 176
V ++ L+ + ++L EA F+E+ + G++P TY+T+++A C KG + +
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 177 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP--DEALEILRGMPEMLLDPDEVSY 234
+E+ + GF P L+++N L+ F++R E I M L P+ SY
Sbjct: 217 EELEKNGF--------EPDLISFNTLLEE--FYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Query: 235 SAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE 294
++ + G R ++ A L +D E + D+ T+++L+ Y +
Sbjct: 267 NSRVRGLTRNKKFTDALNL------------IDVMKTEGISPDVH---TYNALITAYRVD 311
Query: 295 DKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYI 351
+ E +K + + PD+V+YC+L+ L KK A + I L+ P+
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN-- 369
Query: 352 IYDILIEKC-ANNEFKSVVELVKGFRMRG 379
+Y ++E+ + +LVK +++
Sbjct: 370 MYKPVVERLMGAGKIDEATQLVKNGKLQS 398
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 35/322 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TY+ LI+A H + + + L M ++P+ +TY +I
Sbjct: 44 PDAETYDALINA-------HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 96
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
EA+ + + M + G+ P +++ ++S + ++ KAL M + PD + +
Sbjct: 97 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 156
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMS--PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+I L + +A DLF M + P T+ +++ Y +KGE + + ++
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+G P++V+YNAL+ AL +L + + + PD VSY+ +++ +
Sbjct: 217 EG--------LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 268
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
R R+ KA E+ L M +KE P N T+++L++ Y + A+
Sbjct: 269 GRSRQPGKAKEVFLMM-RKERRKP--------------NVVTYNALIDAYGSNGFLAEAV 313
Query: 302 KLRYQAQ---YLPDSVSYCLLL 320
++ Q + P+ VS C LL
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLL 335
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 160/404 (39%), Gaps = 56/404 (13%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
Y MIRL N V++A G+ M + P A++Y +I+ + + A+ + +ML
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
I P Y LI EA ++ ++M G+ P T++ ++ AY ++S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD-- 228
K + + KG P T+N +I+ L + +AL++ M E +
Sbjct: 134 KALSYFE--LMKG------AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 185
Query: 229 PDEVSYSAVISGFR---RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 285
PD V++++++ + I R FE + K N +++
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK------------------PNIVSYN 227
Query: 286 SLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVA 342
+L+ Y + AL + Q +PD VSY LLN + A +F ++
Sbjct: 228 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE--VFLMMR 285
Query: 343 HCLTIPSYIIYDILIEKCANNEF-KSVVELVKGFRMRG----------LVNEAARAR--- 388
P+ + Y+ LI+ +N F VE+ + G L+ +R++
Sbjct: 286 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV 345
Query: 389 --DTML----HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
DT+L R A YN I + + KA +Y+ M
Sbjct: 346 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 114/261 (43%), Gaps = 17/261 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVR--ELSPNETTYRCMIRLFCDR 61
PD T+N +I + ++ + ++L++ M + E P+ T+ ++ L+ +
Sbjct: 149 PDTTTFNIIIYCLSKLGQSS-------QALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 201
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+E + M +GL P+ SY+ ++ + + G AL + ++ GI PDV +Y
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
L+ R+ +A+++F M P TY+ L++AY G ++ + ++ Q
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
G P++V+ L+ ++ +L ++ + +Y++ I +
Sbjct: 322 DG--------IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 242 RRIRELRKAFELKLEMDQKET 262
EL KA L M +K+
Sbjct: 374 INAAELEKAIALYQSMRKKKV 394
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 113/259 (43%), Gaps = 17/259 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTYN LI A + + VE++ QM + PN + C + C R++
Sbjct: 291 PNVVTYNALIDA-------YGSNGFLAEAVEIFRQMEQDGIKPNVVSV-CTLLAACSRSK 342
Query: 64 VEEAVG-ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ V +L +G++ + +Y+ I + E+ KA+ + M K + D +
Sbjct: 343 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 402
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LI C + EA +EM + Y +++ AY +G+ ++ + +++
Sbjct: 403 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 462
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G P ++ Y +++H ++ +A E+ M ++PD ++ SA++ F
Sbjct: 463 GC--------EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN 514
Query: 243 RIRELRKAFELKLEMDQKE 261
+ + F L M +KE
Sbjct: 515 KGGQPSNVFVLMDLMREKE 533
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P TY MI FC ++RV++A +L MA KG SP ++S +I+ +CK K + +E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
EM +GI + Y LI C L A+DL EM+ G++P T+ ++ C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 166 KGEFSKVF------------HLQDE 178
K E K F HL+DE
Sbjct: 128 KKELRKAFAILEDLQKSEDHHLEDE 152
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 109 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 168
ML IFP Y +I C Q R+ +A+ + M +G SP T+ TL+ YC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 169 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 228
+ E+ ++G + + VTY LIHG C D A ++L M +
Sbjct: 61 VDNGMEIFCEMHRRGIVA--------NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Query: 229 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 261
PD +++ +++G +ELRKAF + ++ + E
Sbjct: 113 PDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 145
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 81 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 140
P +Y+ +I FCK + A M M KG PDV + LI C +R+ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 141 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 200
F EM RG+ TY TL+ +C G+ L +E+I G P Y +T++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY--------ITFH 119
Query: 201 ALIHGLCFFQRPDEALEILRGMPE 224
++ GLC + +A IL + +
Sbjct: 120 CMLAGLCSKKELRKAFAILEDLQK 143
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P +TYN++I C+ ++ + + M + SP+ T+ +I +C R
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAK-------RMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V+ + I M +G+ + +Y+ +I FC+ ++ A ++ EM+ G+ PD +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 124 LIQLLCHQRRLLEARDLFQEM 144
++ LC ++ L +A + +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Query: 191 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 250
S P+ +TYN++I G C R D+A +L M PD V++S +I+G+ + + +
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 251 FELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQA 307
E+ EM ++ ++N T+++L++ +C D A+ L
Sbjct: 65 MEIFCEMHRRGI---------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 109
Query: 308 QYLPDSVSYCLLLNGLHKKATSRFATRLL 336
PD +++ +L GL K R A +L
Sbjct: 110 GVAPDYITFHCMLAGLCSKKELRKAFAIL 138
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 16/255 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +TYNTL+SA C + N + + V+++ M P+ TY MI ++
Sbjct: 295 PDAITYNTLLSA-CSRDSNLDGA------VKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
EA + + KG P A +Y+ ++ F + + K E+ +M G D Y
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 124 LIQLLCHQRRLLEARDLFQEML-LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+I + Q +L A L+++M L G +P TY L+++ + L E++
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G P+L TY+ALI G + +EA + M PD ++YS ++
Sbjct: 468 GI--------KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Query: 243 RIRELRKAFELKLEM 257
R E RKA+ L +M
Sbjct: 520 RGNETRKAWGLYRDM 534
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 155/373 (41%), Gaps = 30/373 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+N+L+SA + Y R +++ M SP + ++ C R
Sbjct: 785 PDLKTWNSLMSAYAQCG-------CYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+EE ++ + + G S ++ F + + + ++ M G P + Y +
Sbjct: 838 LEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRM 897
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I+LLC +R+ +A + EM ++++++ Y ++ K + + + G
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P TYN LI C +RP+E +++ M + LDP +Y ++IS F +
Sbjct: 958 --------LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGK 1009
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
+ L +A +L E+ K L D S + T + D ++ KAE L++
Sbjct: 1010 QKCLEQAEQLFEELLSK------------GLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 304 RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL--LFYIVAHCLTIP-SYIIYDILIEKC 360
A P + LL+ + A ++L L T+P S +I L K
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 361 ANNEFKSVVELVK 373
N+ + ++E+ K
Sbjct: 1118 YNSGIERLLEMKK 1130
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 14/241 (5%)
Query: 4 PDCVTYNTLISAACEAEK-NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD +++NTLI+A ++ NL+ VEL + L P+ TY ++ +
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLA------VELLDMVRNSGLRPDAITYNTLLSACSRDS 311
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ AV + M P +Y+ +IS + + +A + +E+ KG FPD Y
Sbjct: 312 NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 371
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+ +R + ++++Q+M G TY+T++ Y +G+ L ++ K
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM--K 429
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G ++ +P +TY LI L R EA ++ M ++ + P +YSA+I G+
Sbjct: 430 G-----LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYA 484
Query: 243 R 243
+
Sbjct: 485 K 485
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 171/434 (39%), Gaps = 85/434 (19%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
Y M+ ++ + +A ++ M ++G P S++ +I+ + K G + VE+L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN--ARLKSGGLTPNLAVELL 285
Query: 111 D----KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
D G+ PD Y L+ L A +F++M P TY+ ++ Y
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G ++ L E+ KGF P VTYN+L++ + ++ E+ + M +M
Sbjct: 346 GLAAEAERLFMELELKGFFP--------DAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS 286
DE++Y+ +I + + +L A +L +M K LS +
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDM------------------KGLSGRN---- 435
Query: 287 LVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLT 346
PD+++Y +L++ L K A R T
Sbjct: 436 ------------------------PDAITYTVLIDSLGK------ANR-----------T 454
Query: 347 IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLL 406
+ + + +++ ++ L+ G+ G EA ML +P+ Y+++
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVM 514
Query: 407 IFDHCIGGNVHKAYDMYKEMLHYG----FVCHMFSVLALIKALYCDERYNEMSWVIRNTL 462
+ G KA+ +Y++M+ G + + +L L+K + R +++ IR+
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK----ENRSDDIQKTIRDME 570
Query: 463 RSCNLNDSEQLKIL 476
C +N E +L
Sbjct: 571 ELCGMNPLEISSVL 584
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 9/215 (4%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
+ M++++ ++ V + + + E GL P +Y+ +I +C+++ + + +M
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
+ G+ P + Y LI Q+ L +A LF+E+L +G+ Y T+++ G S
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
K L + G P+L T + L+ P EA ++L + + ++
Sbjct: 1050 KAEKLLQMMKNAG--------IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
+ YS+VI + R ++ E LEM +KE P
Sbjct: 1102 TLPYSSVIDAYLRSKDYNSGIERLLEM-KKEGLEP 1135
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 4 PDCVTYNTLISAACEAEKNHNLS---------------IPYVRIVELYHQMCVRELS--- 45
PD VTYN+L+ A + + Y I+ +Y + +L+
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQL 424
Query: 46 -----------PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
P+ TY +I NR EA ++ M + G+ P +YS +I +
Sbjct: 425 YKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYA 484
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K + +A + ML G PD AY +++ +L +A L+++M+ G +P
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYT 544
Query: 155 TYDTLV 160
Y+ ++
Sbjct: 545 LYELMI 550
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 35/322 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TY+ LI+A H + + + L M ++P+ +TY +I
Sbjct: 176 PDAETYDALINA-------HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
EA+ + + M + G+ P +++ ++S + ++ KAL M + PD + +
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMS--PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+I L + +A DLF M + P T+ +++ Y +KGE + + ++
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+G P++V+YNAL+ AL +L + + + PD VSY+ +++ +
Sbjct: 349 EG--------LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 242 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 301
R R+ KA E+ L M +KE P N T+++L++ Y + A+
Sbjct: 401 GRSRQPGKAKEVFLMM-RKERRKP--------------NVVTYNALIDAYGSNGFLAEAV 445
Query: 302 KLRYQAQ---YLPDSVSYCLLL 320
++ Q + P+ VS C LL
Sbjct: 446 EIFRQMEQDGIKPNVVSVCTLL 467
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 160/404 (39%), Gaps = 56/404 (13%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
Y MIRL N V++A G+ M + P A++Y +I+ + + A+ + +ML
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
I P Y LI EA ++ ++M G+ P T++ ++ AY ++S
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD-- 228
K + + KG P T+N +I+ L + +AL++ M E +
Sbjct: 266 KALSYFE--LMKG------AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 317
Query: 229 PDEVSYSAVISGFR---RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 285
PD V++++++ + I R FE + K N +++
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK------------------PNIVSYN 359
Query: 286 SLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVA 342
+L+ Y + AL + Q +PD VSY LLN + A +F ++
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE--VFLMMR 417
Query: 343 HCLTIPSYIIYDILIEKCANNEF-KSVVELVKGFRMRG----------LVNEAARAR--- 388
P+ + Y+ LI+ +N F VE+ + G L+ +R++
Sbjct: 418 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV 477
Query: 389 --DTML----HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 426
DT+L R A YN I + + KA +Y+ M
Sbjct: 478 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 114/261 (43%), Gaps = 17/261 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVR--ELSPNETTYRCMIRLFCDR 61
PD T+N +I + ++ + ++L++ M + E P+ T+ ++ L+ +
Sbjct: 281 PDTTTFNIIIYCLSKLGQSS-------QALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 333
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+E + M +GL P+ SY+ ++ + + G AL + ++ GI PDV +Y
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
L+ R+ +A+++F M P TY+ L++AY G ++ + ++ Q
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
G P++V+ L+ ++ +L ++ + +Y++ I +
Sbjct: 454 DG--------IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 505
Query: 242 RRIRELRKAFELKLEMDQKET 262
EL KA L M +K+
Sbjct: 506 INAAELEKAIALYQSMRKKKV 526
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 113/259 (43%), Gaps = 17/259 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTYN LI A + + VE++ QM + PN + C + C R++
Sbjct: 423 PNVVTYNALIDA-------YGSNGFLAEAVEIFRQMEQDGIKPNVVSV-CTLLAACSRSK 474
Query: 64 VEEAVG-ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ V +L +G++ + +Y+ I + E+ KA+ + M K + D +
Sbjct: 475 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LI C + EA +EM + Y +++ AY +G+ ++ + +++
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G P ++ Y +++H ++ +A E+ M ++PD ++ SA++ F
Sbjct: 595 GC--------EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN 646
Query: 243 RIRELRKAFELKLEMDQKE 261
+ + F L M +KE
Sbjct: 647 KGGQPSNVFVLMDLMREKE 665
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 14/261 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD Y TL+ KN ++ R++E + R P+E TY ++ F +
Sbjct: 412 PDSRIYTTLMKGYM---KNGRVA-DTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML-DKGIFPDVHAYG 122
++ A +L MA G+ + +Y+ ++ +CK ++ +A ++ EM D GI PDV +Y
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++I A F EM RG++P +Y TL++A+ + G+ + DE++
Sbjct: 528 IIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND 587
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
+ L+ +N L+ G C ++A ++ M E P+ +Y ++ +G
Sbjct: 588 PRVKV-------DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVS 640
Query: 243 RIRELRKAFELKLEMDQKETC 263
+ R+ A L E+ KE C
Sbjct: 641 QARKPGDALLLWKEI--KERC 659
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 166/443 (37%), Gaps = 66/443 (14%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +N +++A + +L+ +M + P+ TY MI+L R
Sbjct: 234 PDTAAFNAVLNACANLGDTD-------KYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGR 286
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E V +L + +KG+ + +++ + ++ A + M +K
Sbjct: 287 KELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKR---------- 336
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK-----VFH--LQ 176
+ LC R A DL ++ D Y + E S+ VF L
Sbjct: 337 --RDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLP 394
Query: 177 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR-PDEA--LEILRGMPEMLLDPDEVS 233
+ V G P F+P Y L+ G R D A LE +R + PDEV+
Sbjct: 395 NSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVT 454
Query: 234 YSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCA 293
Y+ V+S F + +A ++ EM + +N T++ L+ YC
Sbjct: 455 YTTVVSAFVNAGLMDRARQVLAEMARMGVP---------------ANRITYNVLLKGYCK 499
Query: 294 E---DKAEMALK-LRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPS 349
+ D+AE L+ + A PD VSY ++++G S A L F + P+
Sbjct: 500 QLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDS--AGALAFFNEMRTRGIAPT 557
Query: 350 YIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLH-RNYRPEGAVYNLLIF 408
I Y L+K F M G A R D M++ + + +N+L+
Sbjct: 558 KISY---------------TTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVE 602
Query: 409 DHCIGGNVHKAYDMYKEMLHYGF 431
+C G + A + M GF
Sbjct: 603 GYCRLGLIEDAQRVVSRMKENGF 625
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 43/308 (13%)
Query: 43 ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 102
+ P+ TY ++ C +N + A I+ M E GL P YS II K + +A
Sbjct: 542 DFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEA 601
Query: 103 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 162
E +ML+ GI PD AY ++I R+ EA +L +E++ + P TY L+
Sbjct: 602 EETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG 661
Query: 163 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD--EALEILR 220
+ G K D++++ G SP++V Y ALI F ++ D + +
Sbjct: 662 FVKMGMMEKGCQYLDKMLEDG--------LSPNVVLYTALIGH--FLKKGDFKFSFTLFG 711
Query: 221 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ--------------------- 259
M E + D ++Y ++SG R +K ++ +E +
Sbjct: 712 LMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLG 771
Query: 260 ----KETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPD 312
K + +S++ +L H+T ++ YCA D+A L+ + +P+
Sbjct: 772 NYGSKSFAMEVIGKVKKSIIPNLYLHNT---IITGYCAAGRLDEAYNHLESMQKEGIVPN 828
Query: 313 SVSYCLLL 320
V+Y +L+
Sbjct: 829 LVTYTILM 836
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 88
Y+ + +M +P +Y +I+ N +E+ ++ ++ E P D+Y
Sbjct: 493 YIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLI 552
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
+++ CK + A + M + G+ P V Y +I L Q R++EA + F +ML G
Sbjct: 553 VVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESG 612
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
+ P Y ++ Y G + L +EV+ K FL PS TY LI G
Sbjct: 613 IQPDEIAYMIMINTYARNGRIDEANELVEEVV-KHFL-------RPSSFTYTVLISGFVK 664
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
++ + L M E L P+ V Y+A+I F + + + +F L
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTL 709
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VTY L+ + EA + ++L+ P++ Y +++ CD R
Sbjct: 827 PNLVTYTILMKSHIEAGDIES-------AIDLFEGT---NCEPDQVMYSTLLKGLCDFKR 876
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+A+ ++ M + G++P+ DSY +++ C ++ +A+++ +M I+P +
Sbjct: 877 PLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTW 936
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMS 150
LI +LC +++L EAR LF M+ G S
Sbjct: 937 LIYILCEEKKLREARALFAIMVQSGRS 963
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 169/421 (40%), Gaps = 23/421 (5%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
Y+ + FC R EA + M G Y+ ++ +CK+ M A+ + + M+
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
++ D + LI L + R +F +M+ +G+ TY ++ +YC +G
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP--DEALEILRGMPEMLLD 228
+ L+ V G S ++ Y LI G F+++ D+A+++L M + +
Sbjct: 360 --YALRLFVNNTG-----SEDISRNVHCYTNLIFG--FYKKGGMDKAVDLLMRMLDNGIV 410
Query: 229 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT-FSSL 287
PD ++Y F ++ L K ELK M ++ N ++ DL N + SL
Sbjct: 411 PDHITY------FVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESL 464
Query: 288 VNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTI 347
+ + +D A+ L L +Y L+ + K + V CL
Sbjct: 465 LGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQ 524
Query: 348 PSYI-----IYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 402
+ I + +I+ E + + + +V + + A D M RP A+
Sbjct: 525 ENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAI 584
Query: 403 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTL 462
Y+ +I G V +A + + +ML G + + +I + R +E + ++ +
Sbjct: 585 YSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Query: 463 R 463
+
Sbjct: 645 K 645
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 101 KALEMKV-EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 159
K+ M+V + K I P+++ + +I C RL EA + + M G+ P TY L
Sbjct: 776 KSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTIL 835
Query: 160 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 219
++++ G+ L + T+ P V Y+ L+ GLC F+RP +AL ++
Sbjct: 836 MKSHIEAGDIESAIDL-----------FEGTNCEPDQVMYSTLLKGLCDFKRPLDALALM 884
Query: 220 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
M + ++P++ SY ++ R +A ++ +M + WP
Sbjct: 885 LEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDI-WP 929
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 16/183 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQ---MCVRELSPNETTYRCMIRLFCD 60
P+ +NT+I+ C A R+ E Y+ M + PN TY +++ +
Sbjct: 792 PNLYLHNTIITGYCAAG----------RLDEAYNHLESMQKEGIVPNLVTYTILMKSHIE 841
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+E A+ L P YS ++ C K AL + +EM GI P+ +
Sbjct: 842 AGDIESAID---LFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDS 898
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y L+Q LC+ R +EA + ++M + P + L+ C + + + L ++
Sbjct: 899 YEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMV 958
Query: 181 QKG 183
Q G
Sbjct: 959 QSG 961
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 41 VRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEM 99
+ ++ PN TT+ M+ F E I R M E+ G SP+ SY+ ++ +C M
Sbjct: 238 IGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLM 297
Query: 100 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 159
+A ++ EM +G+ D+ AY +I LC +++A++LF++M L+G+ TY+ L
Sbjct: 298 SEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHL 357
Query: 160 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC---FFQRPDEAL 216
V YC G+ + E+ +KG F +T AL+ GLC QR EA
Sbjct: 358 VNGYCKAGDVDSGLVVYREMKRKG--------FEADGLTIEALVEGLCDDRDGQRVVEAA 409
Query: 217 EILR-GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
+I++ + E + P Y ++ ++ +A ++ EM K
Sbjct: 410 DIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGK 454
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 4 PDCVTYNTLISAAC------EAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRL 57
P+ +YN L+ A C EAEK ++ +M VR + + Y MI
Sbjct: 279 PNVYSYNVLMEAYCARGLMSEAEK-------------VWEEMKVRGVVYDIVAYNTMIGG 325
Query: 58 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 117
C V +A + R M KG+ +Y +++ +CK ++ L + EM KG D
Sbjct: 326 LCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEAD 385
Query: 118 VHAYGLLIQLLCHQR---RLLEARDLFQEMLLRGM-SPGGRTYDTLVEAYCLKGEFSKVF 173
L++ LC R R++EA D+ ++ + M P Y+ LV+ C G+ +
Sbjct: 386 GLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRAL 445
Query: 174 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 205
++Q E++ KG F PS TY A I G
Sbjct: 446 NIQAEMVGKG--------FKPSQETYRAFIDG 469
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D V YNT+I C + V+ EL+ M ++ + TY ++ +C V
Sbjct: 315 DIVAYNTMIGGLCS-------NFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDV 367
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE----MKVEMLDKGIFPDVHA 120
+ + + R M KG + ++ C +++ + +E +K + + +P +
Sbjct: 368 DSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNC 427
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 168
Y LL++ LC ++ A ++ EM+ +G P TY ++ Y + G+
Sbjct: 428 YELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 18/227 (7%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD V Y +I+A C+A+K Y + +++M R P+ + +I
Sbjct: 264 EPDVVAYGIIINAHCKAKK-------YEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEK 316
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ +A+ G A +Y+ ++ +C ++ M A + EM KG+ P+ Y
Sbjct: 317 KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 376
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+++ L +R EA +++Q M P TY+ +V +C K + DE+ K
Sbjct: 377 IILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 433
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 229
G LP + +++LI LC + DEA E M ++ + P
Sbjct: 434 GVLP--------GMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 135/323 (41%), Gaps = 53/323 (16%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
YN LI + + ++ + I L M ++L ET + + R + +V+EA
Sbjct: 130 NYNALIESLGKIKQ-------FKLIWSLVDDMKAKKLLSKET-FALISRRYARARKVKEA 181
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
+G M E G + ++R++ K++ +G A ++ +M K PD+ +Y +L++
Sbjct: 182 IGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG 241
Query: 128 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 187
+ LL ++ +EM G P Y ++ A+C ++ + +E+ Q+ P
Sbjct: 242 WGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPS 301
Query: 188 ---------------------------YVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 220
+ F TYNAL+ C+ QR ++A + +
Sbjct: 302 PHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVD 361
Query: 221 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 280
M + P+ +Y ++ R++ ++A+E+ M +C P
Sbjct: 362 EMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM----SCEP--------------T 403
Query: 281 HDTFSSLVNDYCAEDKAEMALKL 303
T+ +V +C +++ +MA+K+
Sbjct: 404 VSTYEIMVRMFCNKERLDMAIKI 426
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
TYN L+ A C +++ + Y + E M ++ + PN TY ++ R +EA
Sbjct: 339 TYNALVGAYCWSQR---MEDAYKTVDE----MRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
+ + M+ P +Y ++ FC + + A+++ EM KG+ P +H + LI
Sbjct: 392 YEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Query: 128 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 175
LCH+ +L EA + F EML G+ P G + L + +G KV L
Sbjct: 449 LCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDL 496
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 18/239 (7%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD +Y L+ + + +R+ E+ +M P+ Y +I C
Sbjct: 229 EPDIKSYTILLEGWGQ-------ELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAK 281
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ EEA+ M ++ P + +I+ K++ ALE G + Y
Sbjct: 282 KYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYN 341
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L+ C +R+ +A EM L+G+ P RTYD ++ + ++ + SK +
Sbjct: 342 ALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILH-HLIRMQRSK----------E 390
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
+ Y S P++ TY ++ C +R D A++I M + P +S++I+
Sbjct: 391 AYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ TY+ ++ H+L I R E Y P +TY M+R+FC++ R
Sbjct: 370 PNARTYDIIL---------HHL-IRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKER 419
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ A+ I M KG+ P +S +I+ C ++ +A E EMLD GI P H +
Sbjct: 420 LDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSR 479
Query: 124 LIQLLCHQRRLLEARDLFQEM 144
L Q L + R + DL +M
Sbjct: 480 LKQTLLDEGRKDKVTDLVVKM 500
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 171/386 (44%), Gaps = 38/386 (9%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 109
T+ MI++ + +++ A IL M EKG+ D + +I + K + +++++ +M
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
D G+ + +Y L +++ + R + A+ F +M+ G+ P TY+ ++ + L
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 170 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 229
+++ +G SP T+N +I+G C F++ DEA ++ M + P
Sbjct: 272 ETALRFFEDMKTRG--------ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 230 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN 289
VSY+ +I G+ L +D+ + + ++ S ++ N T+S+L+
Sbjct: 324 SVVSYTTMIKGY-------------LAVDRVDDGLRIFEEMRSSGIE--PNATTYSTLLP 368
Query: 290 DYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLT 346
C K A+ LK P S L L KA A +L + L
Sbjct: 369 GLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMA--TLN 426
Query: 347 IPSYII-YDILIE-KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYN 404
+P+ Y +LIE +C + + ++L+ + ++ R +DT+ E + YN
Sbjct: 427 VPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEII---LRHQDTL-----EMEPSAYN 478
Query: 405 LLIFDHCIGGNVHKAYDMYKEMLHYG 430
+I C G KA ++++++ G
Sbjct: 479 PIIEYLCNNGQTAKAEVLFRQLMKRG 504
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Query: 32 IVELYHQMCV------RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 85
+ +L H C+ + + +E + +I + V+E+V I + M + G+ S
Sbjct: 163 VSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKS 222
Query: 86 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 145
Y+ + + A +M+ +G+ P H Y L++ RL A F++M
Sbjct: 223 YNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMK 282
Query: 146 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 205
RG+SP T++T++ +C F DE +K F+ PS+V+Y +I G
Sbjct: 283 TRGISPDDATFNTMINGFCR-------FKKMDEA-EKLFVEMKGNKIGPSVVSYTTMIKG 334
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
R D+ L I M ++P+ +YS ++ G
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 159/384 (41%), Gaps = 29/384 (7%)
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
+++M + P TY M+ F R+E A+ M +G+SP +++ +I+ FC+
Sbjct: 243 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
K+M +A ++ VEM I P V +Y +I+ R+ + +F+EM G+ P T
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 215
Y TL+ C G+ + ++ ++ K P + F LV+ + A
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAA-------A 415
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
E+L+ M + + + Y +I + +A +L + +KE QDT L
Sbjct: 416 TEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILR-HQDT---LE 471
Query: 276 KDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRL 335
+ S ++ + + KAE+ + + + + D + L+ G K+
Sbjct: 472 MEPSAYNPIIEYLCNNGQTAKAEVLFR-QLMKRGVQDQDALNNLIRGHAKEGNPD----- 525
Query: 336 LLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRN 395
SY I I+ + E + L+K + +G +A A D+M+
Sbjct: 526 ------------SSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDG 573
Query: 396 YRPEGAVYNLLIFDHCIGGNVHKA 419
+ P+ +++ +I G V A
Sbjct: 574 HVPDSSLFRSVIESLFEDGRVQTA 597
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 174/400 (43%), Gaps = 51/400 (12%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+NT+I+ C +K +L+ +M ++ P+ +Y MI+ + +R
Sbjct: 288 PDDATFNTMINGFCRFKKMDEAE-------KLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V++ + I M G+ P+A +YS ++ C +M +A + M+ K I P ++ +
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS--I 398
Query: 124 LIQLLCHQRR---LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
++LL Q + + A ++ + M + Y L+E C +++ L D +I
Sbjct: 399 FLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLI 458
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+K + + + YN +I LC + +A + R + + + D+ + + +I G
Sbjct: 459 EKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRG 517
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---A 297
+ ++E+ M ++ P + + E L+K Y ++ + A
Sbjct: 518 HAKEGNPDSSYEILKIMSRRGV--PRESNAYELLIK-------------SYMSKGEPGDA 562
Query: 298 EMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
+ AL + ++PDS + ++ L + + A+R+++ I+I
Sbjct: 563 KTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMM-----------------IMI 605
Query: 358 EKCANNE--FKSVVELVKGFRMRGLVNEAARARDTMLHRN 395
+K E + ++++ MRG V EA R +L++N
Sbjct: 606 DKNVGIEDNMDLIAKILEALLMRGHVEEAL-GRIDLLNQN 644
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 164/413 (39%), Gaps = 64/413 (15%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ TY+TL+ C+A K V + M + ++P + + ++L ++
Sbjct: 357 EPNATTYSTLLPGLCDAGK-------MVEAKNILKNMMAKHIAPKDNS--IFLKLLVSQS 407
Query: 63 RVEE---AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF---- 115
+ + A +L+ MA + A Y +I CK +A+++ +++K I
Sbjct: 408 KAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQ 467
Query: 116 ----PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 171
+ AY +I+ LC+ + +A LF++++ RG+ + L+ + +G
Sbjct: 468 DTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQD-ALNNLIRGHAKEGNPDS 526
Query: 172 VFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 231
+ + + ++G +P + Y LI P +A L M E PD
Sbjct: 527 SYEILKIMSRRG-VPRESNA-------YELLIKSYMSKGEPGDAKTALDSMVEDGHVPDS 578
Query: 232 VSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD--------------TNESLVK- 276
+ +VI ++ A + + M K + D E+L +
Sbjct: 579 SLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRI 638
Query: 277 DLSNHDT----FSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
DL N + SL++ + K ALK LL GL + + F+
Sbjct: 639 DLLNQNGHTADLDSLLSVLSEKGKTIAALK---------------LLDFGLERDLSLEFS 683
Query: 333 T-RLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 384
+ +L ++ T+ +Y + ++EK ++ ++KS EL+K G +A
Sbjct: 684 SYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQA 736
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
L TT+ +++ C R+EE + IL+ M E P +Y+ +I + +L
Sbjct: 259 LVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASL 318
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
+ EM I PDV AYG L+ LC R+ +LF EM + + Y L+E +
Sbjct: 319 RVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGF 378
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
G+ +L ++++ G++ + YNA+I GLC + D+A ++ +
Sbjct: 379 VADGKVRSACNLWEDLVDSGYI--------ADIGIYNAVIKGLCSVNQVDKAYKLFQVAI 430
Query: 224 EMLLDPDEVSYSAVISGF 241
E L+PD + S ++ +
Sbjct: 431 EEELEPDFETLSPIMVAY 448
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 164/423 (38%), Gaps = 58/423 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD Y +I +E N + S+ ++ +M E+ P+ Y ++ C R
Sbjct: 296 PDVFAYTAMIKTLV-SEGNLDASL------RVWDEMRRDEIKPDVMAYGTLVVGLCKDGR 348
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VE + M K + + Y +I F + ++ A + +++D G D+ Y
Sbjct: 349 VERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNA 408
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I+ LC ++ +A LFQ + + P T ++ AY + S ++ + + + G
Sbjct: 409 VIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG 468
Query: 184 F-LPYYVTSF-------------------------SPSLVTYNALIHGLCFFQRPDEALE 217
+ + Y+T F S+ YN L+ L ++L
Sbjct: 469 YPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLS 528
Query: 218 ILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA---FELKLEMD-----------QKETC 263
+ M ++ +PD SYS I F +++ A E +EM K C
Sbjct: 529 LFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLC 588
Query: 264 WPLDQDTNESLVKD-LSNHDT------FSSLVNDYCAEDKAEMALKL---RYQAQYLPDS 313
+ D LV++ L N ++ ++ V C AE +K+ Q +
Sbjct: 589 QIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINE 648
Query: 314 VSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIY-DILIEKCANNEFKSVVELV 372
V YC +++G+ K T + A + +T ++Y ++LIE+ V+ +
Sbjct: 649 VIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGI 708
Query: 373 KGF 375
K F
Sbjct: 709 KFF 711
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 8/208 (3%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P+E + +IR+ D R + M + G P Y+RI+ KN AL +
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAV 250
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
+ + G+ + + +L++ LC R+ E ++ Q M P Y +++
Sbjct: 251 YEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVS 310
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
+G + DE+ + P ++ Y L+ GLC R + E+ M
Sbjct: 311 EGNLDASLRVWDEMRR--------DEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK 362
Query: 226 LLDPDEVSYSAVISGFRRIRELRKAFEL 253
+ D Y +I GF ++R A L
Sbjct: 363 QILIDREIYRVLIEGFVADGKVRSACNL 390
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
+ T+ L+ C+A + + +E+ +M P+ Y MI+ +
Sbjct: 262 ESTTFMILVKGLCKAGRIEEM-------LEILQRMRENLCKPDVFAYTAMIKTLVSEGNL 314
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+ ++ + M + P +Y ++ CK+ + + E+ +EM K I D Y +L
Sbjct: 315 DASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVL 374
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I+ ++ A +L+++++ G Y+ +++ C + K + L I++
Sbjct: 375 IEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEEL 434
Query: 185 LPYYVTSFSPSLVTY 199
P + T SP +V Y
Sbjct: 435 EPDFET-LSPIMVAY 448
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD TYN +I CE+ + + +M + + P ++ MI F
Sbjct: 179 EPDLETYNRMIRVLCESGSTSSSY-------SIVAEMERKWIKPTAASFGLMIDGFYKEE 231
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ +E ++R+M E G+ +Y+ +I CK K+ +A + ++ + P+ Y
Sbjct: 232 KFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYS 291
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LLI C + L EA +LF+ M+ G P Y TL+ C G+F L E ++K
Sbjct: 292 LLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEK 351
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
++P SFS L++GL + DEA E++ + E
Sbjct: 352 NWVP----SFS----VMKWLVNGLASRSKVDEAKELIAVVKE 385
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
+ P+ TY MIR+ C+ + I+ M K + P A S+ +I F K ++ +
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
++ M + G+ V Y ++IQ LC +++ EA+ L ++ M P TY L+ +
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 207
C + + +L + ++ G + P Y LIH LC
Sbjct: 298 CSEENLDEAMNLFEVMVCNG--------YKPDSECYFTLIHCLC 333
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 9/240 (3%)
Query: 22 NHNLSIPYVRIVE-LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLS 80
N L + +++E +Y QM SP+ TY ++ +++ + MA G S
Sbjct: 227 NSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFS 286
Query: 81 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 140
P + +Y+ ++ K + AL M + GI P V Y LI L L +
Sbjct: 287 PDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYF 346
Query: 141 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 200
EM+ G P Y ++ Y + GE K + E+ KG L P++ TYN
Sbjct: 347 LDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL--------PNVFTYN 398
Query: 201 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
++I GLC EA +L+ M +P+ V YS ++S R+ +L +A ++ EM +K
Sbjct: 399 SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 40/318 (12%)
Query: 49 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 108
+Y ++++F + + ++ M + G A +++ +I C E G A + V+
Sbjct: 150 NSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVVQ 206
Query: 109 MLDKGIF---PDVHAYGLLIQLL--CHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
+ F P H+Y ++ L Q +L+E ++++ML G SP TY+ L+
Sbjct: 207 FMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEW--VYKQMLEDGFSPDVLTYNILLWTN 264
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
G+ + L DE+ + G FSP TYN L+H L +P AL L M
Sbjct: 265 YRLGKMDRFDRLFDEMARDG--------FSPDSYTYNILLHILGKGNKPLAALTTLNHMK 316
Query: 224 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 283
E+ +DP + Y+ +I G R L +A + L+ K C P +
Sbjct: 317 EVGIDPSVLHYTTLIDGLSRAGNL-EACKYFLDEMVKAGCRP--------------DVVC 361
Query: 284 FSSLVNDYCAE---DKA-EMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFY 339
++ ++ Y DKA EM ++ + Q LP+ +Y ++ GL R A LL
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQ-LPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Query: 340 IVAHCLTIPSYIIYDILI 357
C P++++Y L+
Sbjct: 421 ESRGC--NPNFVVYSTLV 436
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TYN L+ + K P + L H V + P+ Y +I
Sbjct: 287 PDSYTYNILLHILGKGNK------PLAALTTLNHMKEV-GIDPSVLHYTTLIDGLSRAGN 339
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E L M + G P Y+ +I+ + + E+ KA EM EM KG P+V Y
Sbjct: 340 LEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I+ LC EA L +EM RG +P Y TLV G+ S+ + E+++KG
Sbjct: 400 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Query: 184 FLPYYVTSFSPSLVTY 199
+ V P ++ Y
Sbjct: 460 HYVHLV----PKMMKY 471
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 169/414 (40%), Gaps = 67/414 (16%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D YN L+ A + EK +++ M R +E TY MIR +
Sbjct: 237 DIFAYNMLLDALAKDEK----------ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKC 286
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+EAVG+ M +GL+ + Y+ ++ K K + KA+++ M++ G P+ + Y LL
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLL 346
Query: 125 IQLLCHQRRLL--------------------------------EARDLFQEMLLRGMSPG 152
+ LL + +L+ EA LF +M +
Sbjct: 347 LNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE 406
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
+Y +++E+ C G+ + + ++ +KG + + YN + L ++
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVV--------TDTMMYNTVFSALGKLKQI 458
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
++ M + PD +Y+ +I+ F R+ E+ +A + E+++ + C P
Sbjct: 459 SHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD-CKP------- 510
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 332
D+ ++++ + + D+A + K + PD V+Y L+ K A
Sbjct: 511 ----DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMA 566
Query: 333 TRLLLFYIVAHCLTIPSYIIYDILIEKC--ANNEFKSVVELVKGFRMRGLVNEA 384
L +V C P+ + Y+IL++ C N V+L + +GL ++
Sbjct: 567 YSLFEEMLVKGCQ--PNIVTYNILLD-CLEKNGRTAEAVDLYSKMKQQGLTPDS 617
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 7/186 (3%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D + YNT+ SA + ++ I +L+ +M SP+ TY +I F V
Sbjct: 441 DTMMYNTVFSALGKLKQ-------ISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+EA+ I + P SY+ +I+ KN ++ +A EM +KG+ PDV Y L
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
++ R+ A LF+EML++G P TY+ L++ G ++ L ++ Q+G
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 185 LPYYVT 190
P +T
Sbjct: 614 TPDSIT 619
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 21/244 (8%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
+Y +++ + C A K + +E+ ++ + + + Y + ++
Sbjct: 409 SYMSMLESLCGAGKT-------IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHI 461
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
+ M + G SP +Y+ +I+ F + E+ +A+ + E+ PD+ +Y LI
Sbjct: 462 HDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINC 521
Query: 128 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 187
L + EA F+EM +G++P TY TL+E + + L +E++ KG
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG---- 577
Query: 188 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS------AVISGF 241
P++VTYN L+ L R EA+++ M + L PD ++Y+ +V G
Sbjct: 578 ----CQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGK 633
Query: 242 RRIR 245
RIR
Sbjct: 634 SRIR 637
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 7/156 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TYN LI++ + + ++ ++ + P+ +Y +I
Sbjct: 475 PDIFTYNILIASFGRVGEVD-------EAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V+EA + M EKGL+P +YS ++ F K + + A + EML KG P++ Y +
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 159
L+ L R EA DL+ +M +G++P TY L
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD ++YN+LI+ KN ++ +VR + +M + L+P+ TY ++ F R
Sbjct: 510 PDIISYNSLINCLG---KNGDVDEAHVR----FKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VE A + M KG P+ +Y+ ++ KN +A+++ +M +G+ PD Y +
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTV 622
Query: 124 L--IQLLCHQRRLLEARD 139
L +Q + H + + ++
Sbjct: 623 LERLQSVSHGKSRIRRKN 640
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 16/257 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD + L+ A C+ + + +L+ M +R N + ++ +C
Sbjct: 215 EPDEYVFGCLLDALCKHGSVKDAA-------KLFEDMRMR-FPVNLRYFTSLLYGWCRVG 266
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ EA +L M E G P Y+ ++S + +M A ++ +M +G P+ + Y
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 326
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LIQ LC R+ EA +F EM TY LV +C G+ K + + D++I+K
Sbjct: 327 VLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKK 386
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
G + PS +TY ++ + +E LE++ M ++ PD Y+ VI
Sbjct: 387 GLM--------PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLAC 438
Query: 243 RIRELRKAFELKLEMDQ 259
++ E+++A L EM++
Sbjct: 439 KLGEVKEAVRLWNEMEE 455
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 177/429 (41%), Gaps = 53/429 (12%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKG---LSPHADSYSRIISRFCKNKEMGKALEMK 106
Y+ M+++ + G++ M ++ + P + + ++ RF + KA+E+
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEP--ELFVVLVQRFASADMVKKAIEVL 206
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
EM G PD + +G L+ LC + +A LF++M +R R + +L+ +C
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRV 265
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
G+ + ++ ++ + G F P +V Y L+ G + +A ++LR M
Sbjct: 266 GKMMEAKYVLVQMNEAG--------FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS 286
+P+ Y+ +I ++ + +A ++ +EM++ E ++ T+++
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYEC---------------EADVVTYTA 362
Query: 287 LVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAH 343
LV+ +C DK + L + +P ++Y ++ KK + F L L +
Sbjct: 363 LVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKES--FEECLELMEKMRQ 420
Query: 344 CLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 403
P IY+++I G V EA R + M P +
Sbjct: 421 IEYHPDIGIYNVVIRLACK---------------LGEVKEAVRLWNEMEENGLSPGVDTF 465
Query: 404 NLLIFDHCIGGNVHKAYDMYKEMLHYG-FVCHMFSVLALIKALYCDERYNEMS---WVIR 459
++I G + +A D +KEM+ G F + L L+ ++ EM+ W
Sbjct: 466 VIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCI 525
Query: 460 NTLRSCNLN 468
+ +C LN
Sbjct: 526 TSKGACELN 534
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 8/204 (3%)
Query: 38 QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 97
QM P+ Y ++ + + ++ +A +LR M +G P+A+ Y+ +I CK
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 98 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 157
M +A+++ VEM DV Y L+ C ++ + + +M+ +G+ P TY
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYM 396
Query: 158 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 217
++ A+ K F + L +++ Q + P + YN +I C EA+
Sbjct: 397 HIMVAHEKKESFEECLELMEKMRQ--------IEYHPDIGIYNVVIRLACKLGEVKEAVR 448
Query: 218 ILRGMPEMLLDPDEVSYSAVISGF 241
+ M E L P ++ +I+G
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGL 472
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ Y LI A C+ ++ ++++ +M E + TY ++ FC
Sbjct: 319 EPNANCYTVLIQALCKVDRMEE-------AMKVFVEMERYECEADVVTYTALVSGFCKWG 371
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++++ +L M +KGL P +Y I+ K + + LE+ +M PD+ Y
Sbjct: 372 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYN 431
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 167
++I+L C + EA L+ EM G+SPG T+ ++ +G
Sbjct: 432 VVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 96/240 (40%), Gaps = 49/240 (20%)
Query: 3 DPDCVTYNTLISAACEAEK----------------------------NHNLSIPYVRIVE 34
+ D VTY L+S C+ K H + +E
Sbjct: 354 EADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLE 413
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
L +M E P+ Y +IRL C V+EAV + M E GLSP D++ +I+
Sbjct: 414 LMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLA 473
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYG---LLIQLLCHQRRLLEARDLFQEMLLRGMSP 151
+ +A + EM+ +G+F V YG LL+ + ++L A+D++ + S
Sbjct: 474 SQGCLLEASDHFKEMVTRGLF-SVSQYGTLKLLLNTVLKDKKLEMAKDVWSCI----TSK 528
Query: 152 GGRTYDTLVEAYCLKGEFSKVFHLQD-----EVIQKGFLPYYVTSFSPSLVTYNALIHGL 206
G + L + FSK + + E+I+ F+P P T+ L+ GL
Sbjct: 529 GACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMP------QPD--TFAKLMKGL 580
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 161/419 (38%), Gaps = 47/419 (11%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
LS T +I D R EA + + + G+ P +Y+ ++ + K + A
Sbjct: 300 LSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAE 359
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
M EM +G+ PD H Y LLI + R AR + +EM + P + L+ +
Sbjct: 360 SMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF 419
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
+GE+ K F + E+ G P YN +I F D A+ M
Sbjct: 420 RDRGEWQKTFQVLKEMKSIG--------VKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 224 EMLLDPDEVSYSAVISGF-RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD 282
++PD V+++ +I + R + E E ++ C P
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHI--VAEEMFEAMERRGCLPC--------------AT 515
Query: 283 TFSSLVNDYCAEDKAE----MALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLF 338
T++ ++N Y +++ + + K++ Q LP+ V++ L++ K + RF +
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQG-ILPNVVTHTTLVDVYGK--SGRFNDAIECL 572
Query: 339 YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 398
+ PS +Y+ LI A RGL +A A M +P
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQ---------------RGLSEQAVNAFRVMTSDGLKP 617
Query: 399 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWV 457
N LI +A+ + + M G + + L+KAL +++ ++ V
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVV 676
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 15/254 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P YN L+ K + + P + +M R +SP+E TY +I + + R
Sbjct: 337 PRTRAYNALL-------KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E A +L+ M + P++ +SR+++ F E K ++ EM G+ PD Y +
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 449
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I L A F ML G+ P T++TL++ +C G + + + ++G
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
L P TYN +I+ +R D+ +L M + P+ V+++ ++ + +
Sbjct: 510 CL--------PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 244 IRELRKAFELKLEM 257
A E EM
Sbjct: 562 SGRFNDAIECLEEM 575
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 8/214 (3%)
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
+ +M + P+ T+ +I C R A + M +G P A +Y+ +I+ +
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 526
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
+ + +M +GI P+V + L+ + R +A + +EM G+ P
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 586
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 215
Y+ L+ AY +G L ++ + F PSL+ N+LI+ +R EA
Sbjct: 587 YNALINAYAQRG-------LSEQAVN-AFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 638
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 249
+L+ M E + PD V+Y+ ++ R+ + +K
Sbjct: 639 FAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 21/251 (8%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD VT+NTLI C+ + ++ E++ M R P TTY MI + D+
Sbjct: 476 EPDRVTWNTLIDCHCKHGR-------HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R ++ +L M +G+ P+ +++ ++ + K+ A+E EM G+ P Y
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI + +A + F+ M G+ P ++L+ A+ ++ F + + +
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 648
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD---PDEVSYSAVIS 239
G P +VTY L+ L R D+ ++ EM++ PD + S + S
Sbjct: 649 G--------VKPDVVTYTTLMKALI---RVDKFQKVPVVYEEMIMSGCKPDRKARSMLRS 697
Query: 240 GFRRIRELRKA 250
R +++ +A
Sbjct: 698 ALRYMKQTLRA 708
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 93/458 (20%), Positives = 178/458 (38%), Gaps = 48/458 (10%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D V Y+ +I + + K I V ++ LY ++ +L + +I F
Sbjct: 231 DFVNYSLVIQSLTRSNK-----IDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+A+ +L + GLS + IIS + +A + E+ GI P AY L
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 345
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
++ L +A + EM RG+SP TY L++AY G + + E ++ G
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE-MEAG- 403
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
P+ ++ L+ G + ++L+ M + + PD Y+ VI F +
Sbjct: 404 ------DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 457
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMAL 301
L A D+ +E + D T+++L++ +C + AE
Sbjct: 458 NCLDHAMT------------TFDRMLSEGIEPD---RVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 302 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCA 361
+ + LP + +Y +++N + R+ L + +P+ + + L++
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQ--ERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 560
Query: 362 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 421
+ G N+A + M +P +YN LI + G +A +
Sbjct: 561 KS---------------GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN 605
Query: 422 MYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 459
++ M G + ++ +LI A D R E V++
Sbjct: 606 AFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 643
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 86/442 (19%), Positives = 163/442 (36%), Gaps = 74/442 (16%)
Query: 21 KNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLS 80
+ HNL Y EL + + + L +E Y + L ++ L+
Sbjct: 158 QKHNLCFSY----ELLYSILIHALGRSEKLYEAFL-----------------LSQKQTLT 196
Query: 81 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR-- 138
P +Y+ +I +N ++ KAL + +M G D Y L+IQ L ++
Sbjct: 197 PL--TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLL 254
Query: 139 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 198
L++E+ + + + ++ + G+ SK L T S T
Sbjct: 255 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMA--------QATGLSAKTAT 306
Query: 199 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 258
++I L R EA + + + + P +Y+A++ G+ + L+ A + EM+
Sbjct: 307 LVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEME 366
Query: 259 QKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVS 315
++ + T+S L++ Y + E A LK P+S
Sbjct: 367 KRGVS---------------PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFV 411
Query: 316 YCLLLNGLHKKATSRFATRLLLFYIVAHCLTI---PSYIIYDILIEKCANNEFKSVVELV 372
+ LL G + + F ++ +I P Y+++I+
Sbjct: 412 FSRLLAGFRDRGEWQKT-----FQVLKEMKSIGVKPDRQFYNVVIDT------------- 453
Query: 373 KGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
F ++ A D ML P+ +N LI HC G A +M++ M G +
Sbjct: 454 --FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 433 CHMFSVLALIKALYCDERYNEM 454
+ +I + ER+++M
Sbjct: 512 PCATTYNIMINSYGDQERWDDM 533
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 153/358 (42%), Gaps = 38/358 (10%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 109
T+ +IR + EAV M + G P ++S +IS + + +A +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
D+ PDV Y L++ C + EA +F+EM L G+ P TY +++A C G+
Sbjct: 248 KDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 170 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 229
S+ + +++ G +P+ +T+N L+ R ++ L++ M ++ +P
Sbjct: 307 SRAHDVFADMLDSG--------CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEP 358
Query: 230 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS---------- 279
D ++Y+ +I R L A ++ M +K+ ++ T ++ + +
Sbjct: 359 DTITYNFLIEAHCRDENLENAVKVLNTMIKKKC--EVNASTFNTIFRYIEKKRDVNGAHR 416
Query: 280 ------------NHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGLH 324
N T++ L+ + +M LK++ + + P+ +Y LL+
Sbjct: 417 MYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC 476
Query: 325 KKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCAN-NEFKSVVELVKGFRMRGLV 381
A +L + CLT PS +Y++++ + + K ELV+ +GLV
Sbjct: 477 GMGHWNNAYKLFKEMVEEKCLT-PSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 158/380 (41%), Gaps = 44/380 (11%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
Y MI L + + A ++ LM + + ++++ +I R+ + +A+ M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
D G PD A+ ++I L +RR EA+ F + R P Y LV +C GE S
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
+ +K F + P++ TY+ +I LC + A ++ M + P+
Sbjct: 273 EA--------EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPN 324
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 290
++++ ++ + K ++ +M +K C P DT T++ L+
Sbjct: 325 AITFNNLMRVHVKAGRTEKVLQVYNQM-KKLGCEP---DT-----------ITYNFLIEA 369
Query: 291 YCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTI 347
+C ++ E A+K+ + + ++ ++ + + KK A R+ + A C
Sbjct: 370 HCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCE-- 427
Query: 348 PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 407
P+ + Y+IL+ ++ +V + + M + P Y LL+
Sbjct: 428 PNTVTYNILMRMFVGSKSTDMV---------------LKMKKEMDDKEVEPNVNTYRLLV 472
Query: 408 FDHCIGGNVHKAYDMYKEML 427
C G+ + AY ++KEM+
Sbjct: 473 TMFCGMGHWNNAYKLFKEMV 492
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 97/216 (44%), Gaps = 8/216 (3%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P+ Y ++R +C + EA + + M G+ P+ +YS +I C+ ++ +A ++
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
+MLD G P+ + L+++ R + ++ +M G P TY+ L+EA+C
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
+ + +I+K + T+N + + + + A + M E
Sbjct: 373 DENLENAVKVLNTMIKK--------KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 226 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 261
+P+ V+Y+ ++ F + ++K EMD KE
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 111/263 (42%), Gaps = 15/263 (5%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD + Y L+ C A + +++ +M + + PN TY +I C
Sbjct: 252 EPDVIVYTNLVRGWCRAGE-------ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
++ A + M + G +P+A +++ ++ K K L++ +M G PD Y
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI+ C L A + M+ + T++T+ K + + + ++++
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME- 423
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
P+ VTYN L+ + D L++ + M + ++P+ +Y +++ F
Sbjct: 424 -------AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC 476
Query: 243 RIRELRKAFELKLEMDQKETCWP 265
+ A++L EM +++ P
Sbjct: 477 GMGHWNNAYKLFKEMVEEKCLTP 499
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +T+N L+ +A + +++++Y+QM P+ TY +I C
Sbjct: 323 PNAITFNNLMRVHVKAGRTE-------KVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN 375
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E AV +L M +K +A +++ I K +++ A M +M++ P+ Y +
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+++ + + +EM + + P TY LV +C G ++ + L E++++
Sbjct: 436 LMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK 495
Query: 184 FLPYYVTSFSPSLVTYNALIHGL 206
L +PSL Y ++ L
Sbjct: 496 CL-------TPSLSLYEMVLAQL 511
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 177/460 (38%), Gaps = 70/460 (15%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P VTYN L+ +A Y + + +M + TY ++ +
Sbjct: 313 EPGTVTYNALLQVFGKAG-------VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+EA G++ +M +KG+ P+A +Y+ +I + K + +AL++ M + G P+ Y
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++ LL + R E + +M G SP T++T++ KG D+ + +
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG--------MDKFVNR 477
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
F F P T+N LI +A ++ M + +Y+A+++
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 243 RIRELRKAFELKLEMDQK-----ETCWPL-----DQDTN----ESLVKDLSNHDTFSS-- 286
R + R + +M K ET + L + N E + + F S
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 287 ------LVNDYC-AEDKAEMALKLRYQAQYLPDSVSYCLLL-----NGLHKKATSRFATR 334
L N C A +E A L + Y PD V + +L N ++ +A
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEG----- 652
Query: 335 LLLFYIVAHCLTIPSYIIYDILIE------KCANNE--------------FKSVVELVKG 374
+L I L+ P + Y+ L++ +C E S ++KG
Sbjct: 653 -ILESIREDGLS-PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKG 710
Query: 375 FRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGG 414
F RGL+ EA R M R RP YN + + G
Sbjct: 711 FCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 147/360 (40%), Gaps = 63/360 (17%)
Query: 117 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG-EFSKVFHL 175
DV AY ++ + +A DLF+ M G SP TY+ +++ + G + K+ +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 176 QDEVIQKG---------------------------FLPYYVTSFSPSLVTYNALIHGLCF 208
DE+ KG F + P VTYNAL+
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 268
EAL +L+ M E D V+Y+ +++ + R ++A + +EM K+ P
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV-IEMMTKKGVMP--- 384
Query: 269 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY---QAQYLPDSVSYCLLLNGLHK 325
N T++++++ Y K + ALKL Y +A +P++ +Y +L+ L K
Sbjct: 385 -----------NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 326 KATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 385
K+ S ++L C P+ ++ ++ C N KG M VN
Sbjct: 434 KSRSNEMIKMLCDMKSNGC--SPNRATWNTMLALCGN----------KG--MDKFVNRVF 479
Query: 386 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
R M + P+ +N LI + G+ A MY EM GF + + AL+ AL
Sbjct: 480 RE---MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P+ + M+ +F N ++A GIL + E GLSP +Y+ ++ + + E KA E+
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
+ + PD+ +Y +I+ C + + EA + EM RG+ P TY+T V Y
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTA 748
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 219
G F+++ ++VI+ P+ +T+ ++ G C + EA++ +
Sbjct: 749 MGMFAEI----EDVIE----CMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE--LSPNETTYRCMIRLFCDR 61
PD V +N+++S +N+ I+E +RE LSP+ TY ++ ++ R
Sbjct: 629 PDMVIFNSMLSIFTR----NNMYDQAEGILE-----SIREDGLSPDLVTYNSLMDMYVRR 679
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+A IL+ + + L P SY+ +I FC+ M +A+ M EM ++GI P + Y
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+ E D+ + M P T+ +V+ YC G++S+ ++
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI-- 797
Query: 182 KGFLP 186
K F P
Sbjct: 798 KTFDP 802
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 142/352 (40%), Gaps = 43/352 (12%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D Y T++ A K Y + ++L+ +M SP TY ++ +F R
Sbjct: 209 DVRAYTTILHAYSRTGK-------YEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRS 261
Query: 65 EEAV-GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+ G+L M KGL + S ++S + + +A E E+ G P Y
Sbjct: 262 WRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNA 321
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+Q+ EA + +EM TY+ LV AY G + + + + +KG
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ P+ +TY +I + DEAL++ M E P+ +Y+AV+S +
Sbjct: 382 VM--------PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 244 IRELRKAFELKLEMDQKETCWP----------------LDQDTNESLVKDLS-----NHD 282
+ ++ +M + C P +D+ N + S + D
Sbjct: 434 KSRSNEMIKMLCDM-KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 283 TFSSLVNDY--CAE--DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSR 330
TF++L++ Y C D ++M ++ +A + +Y LLN L +K R
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMT-RAGFNACVTTYNALLNALARKGDWR 543
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/192 (17%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 73 LMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQR 132
L + G P ++ ++S F +N +A + + + G+ PD+ Y L+ + +
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 133 RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF 192
+A ++ + + + P +Y+T+++ +C +G + + E+ ++G
Sbjct: 681 ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG--------I 732
Query: 193 SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 252
P + TYN + G E +++ M + P+E+++ V+ G+ R + +A +
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 792
Query: 253 LKLEMDQKETCW 264
++ + C+
Sbjct: 793 FVSKIKTFDPCF 804
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 18/238 (7%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D + YN L+ A C K+ ++ Y +++ +M L P+ ++ I +CD V
Sbjct: 242 DLLAYNALLDALC---KSGDVDGGY----KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDV 294
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
A +L M L P+ +++ II CKN+++ A + EM+ KG PD Y +
Sbjct: 295 HSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSI 354
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
+ C + A L M P TY+ +++ G F + + + + ++
Sbjct: 355 MAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSER-- 412
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
F P++ TY +IHGL R LE EM++D YS + R
Sbjct: 413 ------KFYPTVATYTVMIHGLV---RKKGKLEEACRYFEMMIDEGIPPYSTTVEMLR 461
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 8/210 (3%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
+++ +M R + Y ++ C V+ + + M GL P A S++ I +
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
C ++ A ++ M + P+V+ + +I+ LC ++ +A L EM+ +G +P
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
TY++++ +C E ++ L + + L P TYN ++ L R D
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL--------PDRHTYNMVLKLLIRIGRFD 400
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRR 243
A EI GM E P +Y+ +I G R
Sbjct: 401 RATEIWEGMSERKFYPTVATYTVMIHGLVR 430
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 39/307 (12%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 106
+ + + R + N EA M E G+ P D +++ C K + A E
Sbjct: 137 SSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF 196
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
+ GI P Y +L++ R AR +F EML R Y+ L++A C
Sbjct: 197 GKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKS 256
Query: 167 GEFSKVFHLQDEVIQKGFLP--YYVTSF-------------------------SPSLVTY 199
G+ + + E+ G P Y F P++ T+
Sbjct: 257 GDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTF 316
Query: 200 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 259
N +I LC ++ D+A +L M + +PD +Y+++++ E+ +A +L MD+
Sbjct: 317 NHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR 376
Query: 260 KETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLL 319
+ C P D+ T ++K L F D+A + + ++ P +Y ++
Sbjct: 377 TK-CLP-DRHTYNMVLKLLIRIGRF----------DRATEIWEGMSERKFYPTVATYTVM 424
Query: 320 LNGLHKK 326
++GL +K
Sbjct: 425 IHGLVRK 431
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
+ P VTYN+L+ C+A S ++ M R + P TTY + F
Sbjct: 351 SGPTIVTYNSLVKNFCKAGDLPGAS-------KILKMMMTRGVDPTTTTYNHFFKYFSKH 403
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
N+ EE + + + E G SP +Y I+ C++ ++ A+++ EM ++GI PD+
Sbjct: 404 NKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTT 463
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 167
+LI LLC L EA + F + RG+ P T+ + KG
Sbjct: 464 TMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 4 PDCVTYNTLISAAC------------------EAEKNHNLSIPYV-------RIVE---L 35
P VTY TLI C E E N + P + R+ E +
Sbjct: 283 PTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGM 342
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
+ V E P TY +++ FC + A IL++M +G+ P +Y+ F K
Sbjct: 343 MERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSK 402
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
+ + + + + ++++ G PD Y L++++LC +L A + +EM RG+ P T
Sbjct: 403 HNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLT 462
Query: 156 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 190
L+ C + F D +++G +P Y+T
Sbjct: 463 TTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYIT 497
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
+L+ +M + P TY +I +C RV+ A+ +L M + + ++ II
Sbjct: 271 KLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGL 330
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
+ + +AL M P + Y L++ C L A + + M+ RG+ P
Sbjct: 331 GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
TY+ + + + + +L ++I+ G SP +TY+ ++ LC +
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH--------SPDRLTYHLILKMLCEDGKLS 442
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 252
A+++ + M +DPD ++ + +I R+ L +AFE
Sbjct: 443 LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 130/319 (40%), Gaps = 35/319 (10%)
Query: 58 FCDRNRVEEAVGILRLMA---EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 114
C V EA L + + P ++ +++ + +++++ +A ++ EM +
Sbjct: 222 LCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNV 281
Query: 115 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 174
P V YG LI+ C RR+ A ++ +EM + M ++ +++ G S+
Sbjct: 282 KPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALG 341
Query: 175 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 234
+ + ++V P++VTYN+L+ C A +IL+ M +DP +Y
Sbjct: 342 MMER--------FFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTY 393
Query: 235 SAVISGFRRIREL------------------RKAFELKLEMDQKETCWPLDQDTNESLVK 276
+ F + + R + L L+M ++ L N+ +
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKN 453
Query: 277 DLSNHD--TFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRF 331
+ D T + L++ C + E A + A +P +++ ++ NGL K S
Sbjct: 454 RGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDM 513
Query: 332 ATRL-LLFYIVAHCLTIPS 349
A RL L + H +P+
Sbjct: 514 AKRLSSLMSSLPHSKKLPN 532
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +TY+T+I+ A K NL Y + +E + +M L P+E TY ++ ++ +V
Sbjct: 220 DNITYSTIITCA----KRCNL---YNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKV 272
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EE + + G P A ++S + F + + + EM + P+V Y L
Sbjct: 273 EEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTL 332
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
++ + + AR LF EML G++P +T LV+ Y L +E+ K
Sbjct: 333 LEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK-- 390
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL-DPDEVSYSAVISGFRR 243
+ + YN L++ +EA + M E + PD SY+A+++ +
Sbjct: 391 ------KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444
Query: 244 IRELRKAFELKLEM 257
+ KA EL EM
Sbjct: 445 GGKAEKAMELFEEM 458
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 21/249 (8%)
Query: 74 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 133
M + G+ +YS II+ + KA+E M G+ PD Y ++ + +
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 134 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 193
+ E L++ + G P + L + + G++ + ++ E+
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS--------MDVK 323
Query: 194 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
P++V YN L+ + +P A + M E L P+E + +A++ + + R R A +L
Sbjct: 324 PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQL 383
Query: 254 KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK-LRYQAQYLPD 312
EM K+ WP+ D ++T ++ D E++AE ++ Q PD
Sbjct: 384 WEEMKAKK--WPM----------DFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPD 431
Query: 313 SVSYCLLLN 321
+ SY +LN
Sbjct: 432 NFSYTAMLN 440
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
Y +I C + +EA I + GL P +Y+ +I RF +G+A ++ EM+
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RF---SSLGRAEKLYAEMI 72
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
+G+ PD Y +I LC Q +L +AR + S T++TL+ YC
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVK 123
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
+L E+ ++G + +++TY LIHG + AL+I + M +
Sbjct: 124 DGMNLFCEMYRRGIV--------ANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSS 175
Query: 231 EVSYSAVISGFRRIRELRKAFELKLE 256
+++ ++ +ELRKA + L+
Sbjct: 176 SITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 70 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 129
+ ++M E + Y+ II CK + +A + +L G+ PDV Y ++I+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 130 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 189
L A L+ EM+ RG+ P TY++++ C + + ++ +
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV-------------- 102
Query: 190 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 249
S S T+N LI+G C R + + + M + + ++Y+ +I GFR++ +
Sbjct: 103 ---SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNT 159
Query: 250 AFELKLEM 257
A ++ EM
Sbjct: 160 ALDIFQEM 167
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 20/188 (10%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
D D YN +I C+A K + ++ + + L P+ TY MIR F
Sbjct: 11 DMDTAGYNIIIHGLCKAGK-------FDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG 62
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R E+ + M +GL P +Y+ +I CK ++ +A + + +
Sbjct: 63 RAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFN 110
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
LI C R+ + +LF EM RG+ TY TL+ + G+F+ + E++
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 183 GFLPYYVT 190
G +T
Sbjct: 171 GVYSSSIT 178
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 4 PDCVTYNTLI--SAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
PD TYN +I S+ AEK LY +M R L P+ TY MI C +
Sbjct: 47 PDVQTYNMMIRFSSLGRAEK-------------LYAEMIRRGLVPDTITYNSMIHGLCKQ 93
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
N++ +A + +S +++ +I+ +CK + + + EM +GI +V Y
Sbjct: 94 NKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITY 144
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 171
LI A D+FQEM+ G+ T+ ++ C + E K
Sbjct: 145 TTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRK 194
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 25/191 (13%)
Query: 199 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 258
YN +IHGLC + DEA I + L PD +Y+ +I R L +A +L EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 259 QKETCWPLDQDTNESLVKDLSNHD-------------TFSSLVNDYCAEDKAEMALKL-- 303
++ P D T S++ L + TF++L+N YC + + + L
Sbjct: 73 RRGLV-P-DTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFC 130
Query: 304 -RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFY-IVAHCLTIPSYIIYDILIEKCA 361
Y+ + + ++Y L++G + F T L +F +V++ + S DIL + C+
Sbjct: 131 EMYRRGIVANVITYTTLIHGFRQ--VGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCS 188
Query: 362 NNEFKSVVELV 372
E + V ++
Sbjct: 189 RKELRKAVAML 199
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +TYN++I C+ K R++S + +T+ +I +C R
Sbjct: 78 PDTITYNSMIHGLCKQNKLAQ----------------ARKVSKSCSTFNTLINGYCKATR 121
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V++ + + M +G+ + +Y+ +I F + + AL++ EM+ G++ +
Sbjct: 122 VKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRD 181
Query: 124 LIQLLCHQRRLLEA 137
++ LC ++ L +A
Sbjct: 182 ILPQLCSRKELRKA 195
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 21/234 (8%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
T N + C+ + ++++ E + P+E TYR MI+ FCD + EA
Sbjct: 183 TMNRGVETLCKEKLVEEAKFVFIKLKEF--------IKPDEITYRTMIQGFCDVGDLIEA 234
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQ 126
+ LM ++G ++ +I+ K + +A ++ M+ K G D Y ++I
Sbjct: 235 AKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMID 294
Query: 127 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
LC R+ AR +F EM RG+ T+ +L+ +K + + L + V
Sbjct: 295 WLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVE------ 348
Query: 187 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+P + Y+ LI GL +R EA E+ R M + +P +Y ++ G
Sbjct: 349 ------NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQG 396
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +TYN ++ A K R+ L +M SP+ TY ++ N+
Sbjct: 255 PDVLTYNIVMFANFRLGKTD-------RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
A+ +L M E G+ P ++ +I + ++ E + G PDV Y +
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I L +A ++F+EM +G P TY++++ +C+ G+F + L E+ +G
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
+P+ V Y+ L++ L + EA E+++ M E
Sbjct: 428 --------CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVE 460
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 88
Y I +Y QM +P+ TY ++ + + +L M + G SP +Y+
Sbjct: 238 YKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNI 297
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
++ + AL + M + G+ P V + LI L +L + E + G
Sbjct: 298 LLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVG 357
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
+P Y ++ Y GE K + E+ +KG L P++ TYN++I G C
Sbjct: 358 CTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL--------PNVFTYNSMIRGFCM 409
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
+ EA +L+ M +P+ V YS +++ + ++ +A E+ +M +K
Sbjct: 410 AGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 11/182 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELS--PNETTYRCMIRLFCDR 61
PD TYN L+ K P + L H +RE+ P + +I
Sbjct: 290 PDLYTYNILLHHLATGNK------PLAALNLLNH---MREVGVEPGVIHFTTLIDGLSRA 340
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
++E + + G +P Y+ +I+ + E+ KA EM EM +KG P+V Y
Sbjct: 341 GKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTY 400
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+I+ C + EA L +EM RG +P Y TLV G+ + + ++++
Sbjct: 401 NSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVE 460
Query: 182 KG 183
KG
Sbjct: 461 KG 462
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 50/324 (15%)
Query: 140 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 199
L EM+ G T++ L+ C GE L +V+++ F+ ++ P +Y
Sbjct: 174 LIDEMIKDGYPTTACTFNLLI---CTCGEAG----LARDVVEQ-FIKSKTFNYRPYKHSY 225
Query: 200 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 259
NA++H L ++ + M E PD ++Y+ V+ R+ + + + L
Sbjct: 226 NAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL------ 279
Query: 260 KETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSY 316
LD+ + DL T++ L++ +K AL L + + P + +
Sbjct: 280 ------LDEMVKDGFSPDLY---TYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHF 330
Query: 317 CLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI---------EKCANNEFKS 367
L++GL + + + C P + Y ++I EK A FK
Sbjct: 331 TTLIDGLSRAGKLEACKYFMDETVKVGC--TPDVVCYTVMITGYISGGELEK-AEEMFKE 387
Query: 368 VVE------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGN 415
+ E +++GF M G EA M R P VY+ L+ + G
Sbjct: 388 MTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGK 447
Query: 416 VHKAYDMYKEMLHYGFVCHMFSVL 439
V +A+++ K+M+ G H+ S L
Sbjct: 448 VLEAHEVVKDMVEKGHYVHLISKL 471
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 17/238 (7%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRI-VELYHQMCVRELSPNETTYRCMIRLFCDR 61
+PD VTY TLI +A ++ I +++Y +M LSP+ TY +I
Sbjct: 426 EPDRVTYCTLIDIHAKAG--------FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+ A + M +G +P+ +++ +I+ K + AL++ +M + G PD Y
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+++++L H L EA +F EM + P Y LV+ + G K + ++Q
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
G P++ T N+L+ R EA +L+ M + L P +Y+ ++S
Sbjct: 598 AG--------LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 19/257 (7%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 358 DGHTYTTMVGNLGRAKQ-------FGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+EA+ + M E G P +Y +I K + A++M M + G+ PD Y ++
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I L L A LF EM+ +G +P T++ ++ + + L ++ G
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG- 529
Query: 185 LPYYVTSFSPSLVTYNALIH--GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
F P VTY+ ++ G C F +EA + M PDE Y ++ +
Sbjct: 530 -------FQPDKVTYSIVMEVLGHCGFL--EEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 243 RIRELRKAFELKLEMDQ 259
+ + KA++ M Q
Sbjct: 581 KAGNVDKAWQWYQAMLQ 597
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 118/324 (36%), Gaps = 82/324 (25%)
Query: 113 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
G D H Y ++ L ++ E L EM+ G P TY+ L+ +Y +
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 173 FHLQDEVIQKGFLPYYVTSFSPSLVTYNAL--IHGLCFFQRPDEALEILRGMPEMLLDPD 230
++ +++ + G P VTY L IH F D A+++ + M E L PD
Sbjct: 414 MNVFNQMQEAG--------CEPDRVTYCTLIDIHAKAGFL--DIAMDMYQRMQEAGLSPD 463
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 290
+YS +I+ + L A L EM + Q +LV TF+ ++
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEM--------VGQGCTPNLV-------TFNIMIAL 508
Query: 291 YCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTI 347
+ E ALKL A + PD V+Y +++ ++ HC
Sbjct: 509 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVME------------------VLGHC--- 547
Query: 348 PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 407
G + EA M +N+ P+ VY LL+
Sbjct: 548 -------------------------------GFLEEAEGVFAEMQRKNWVPDEPVYGLLV 576
Query: 408 FDHCIGGNVHKAYDMYKEMLHYGF 431
GNV KA+ Y+ ML G
Sbjct: 577 DLWGKAGNVDKAWQWYQAMLQAGL 600
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 126/311 (40%), Gaps = 44/311 (14%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE---LSPNETTYRCMIRLFC 59
+P +TY ++ E +K + E++ + + L P++ Y MI ++
Sbjct: 206 EPSAITYQIILKTFVEGDK-------FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 258
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
E+A + M KG+ +Y+ ++S KE+ K + +M I PDV
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVV 315
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG---EFSKVF--- 173
+Y LLI+ RR EA +F+EML G+ P + Y+ L++A+ + G + VF
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 174 --------------------HLQD-EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
+ D E +K F V F P++VTY LI G
Sbjct: 376 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 435
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW-PLDQDTN 271
++ +E+ M + ++ + ++ R + A EM E+C P DQ
Sbjct: 436 EKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM---ESCGVPPDQKAK 492
Query: 272 ESLVKDLSNHD 282
L+ S D
Sbjct: 493 NVLLSLASTQD 503
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 28/285 (9%)
Query: 45 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
+PN +Y ++ + + A I R M G P A +Y I+ F + + +A E
Sbjct: 171 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 230
Query: 105 MKVEMLDKG---IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
+ +LD+ + PD Y ++I + +AR +F M+ +G+ TY++L+
Sbjct: 231 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 290
Query: 162 AYCLKGEFSKVF-HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 220
E SK++ +Q IQ P +V+Y LI +R +EAL +
Sbjct: 291 FETSYKEVSKIYDQMQRSDIQ------------PDVVSYALLIKAYGRARREEEALSVFE 338
Query: 221 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 280
M + + P +Y+ ++ AF + ++Q +T + + DL +
Sbjct: 339 EMLDAGVRPTHKAYNILLD----------AFAISGMVEQAKTV--FKSMRRDRIFPDLWS 386
Query: 281 HDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 325
+ T S + + AE K + P+ V+Y L+ G K
Sbjct: 387 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 23/311 (7%)
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+ AV L M G P + S++ C++ + ++ + KG F ++ +Y L+
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I LC R+ E+ QEM G++P Y+ L+EA C L DE+
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM----- 458
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
+V +L TYN LI L +E+L + M E ++PDE Y ++I G
Sbjct: 459 ---FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG---- 511
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 304
L K +++ M+ C D T V S V + C+ + A +L
Sbjct: 512 --LCKETKIEAAMEVFRKCMERDHKTVTRRV--------LSEFVLNLCSNGHSGEASQLL 561
Query: 305 YQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNE 364
+ ++L + ++ +LL + R + +I ++ I D+L C++++
Sbjct: 562 REREHLEHTGAHVVLLKCVADAKEVEIGIRHMQ-WIKEVSPSLVHTISSDLLASFCSSSD 620
Query: 365 FKSVVELVKGF 375
S++ ++
Sbjct: 621 PDSILPFIRAI 631
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
P T + + C ++ + + L++ KG SYS +IS CK + ++
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
EM +G+ PDV Y LI+ C + A+ L+ EM + G TY+ L+
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 220
+GE + L D+++++G P Y +LI GLC + + A+E+ R
Sbjct: 480 EGEAEESLRLFDKMLERG--------IEPDETIYMSLIEGLCKETKIEAAMEVFR 526
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P T + L C +K+ +L ++ Y + + +Y MI C R
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHL-------IKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V E+ L+ M ++GL+P Y+ +I CK + + A ++ EM +G ++ Y +
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
LI+ L + E+ LF +ML RG+ P Y +L+E C
Sbjct: 473 LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLC 513
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 88/466 (18%), Positives = 171/466 (36%), Gaps = 64/466 (13%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D ++Y+++ K+ +LS + + L+ Q+ ++ + + YR +I +
Sbjct: 81 DSISYHSIF-------KSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKA 133
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+ A +L G H D +R+++ + A ++ V+M KG+ + +G+
Sbjct: 134 QSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVY 193
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV-EAYCLKGEFSKVFHLQDEVIQKG 183
I C + L E+ ++ G L+ + C F++ +E+
Sbjct: 194 IGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRN-- 251
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
P + Y + E +L+ ++ + P Y A I
Sbjct: 252 ------IDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLIS 305
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD--------------------- 282
+ L +A E+ + + +P+D D ++L+ +S D
Sbjct: 306 AKRLTEAKEVAEVIVSGK--FPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIR 363
Query: 283 TFSSLVNDYCAEDKAEMALK---LRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFY 339
T S L + C DK++ +K L Y + SY L+++ L K R + L
Sbjct: 364 TLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVR-ESYTALQE 422
Query: 340 IVAHCLTIPSYIIYDILIEKCANNEF---------KSVVE-----------LVKGFRMRG 379
+ L P +Y+ LIE C E + VE L++ G
Sbjct: 423 MKKEGLA-PDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEG 481
Query: 380 LVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 425
E+ R D ML R P+ +Y LI C + A +++++
Sbjct: 482 EAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD +N+L++ CE N N S + + +M ++ P +Y ++ R
Sbjct: 241 PDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRR 300
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V E+ IL M G P SY ++ GK ++ EM+++G P+ Y
Sbjct: 301 VRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYD 360
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
LI +LC R+ A LF++M + G+ YD L+ C G F K L +E +
Sbjct: 361 LIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEAL 417
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 24/226 (10%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNE-TTYRCMIRLFCDRNR 63
D T +ISA C + H V ++H V +S NE + YR ++ + +
Sbjct: 172 DGFTVTAIISALCS--RGHVKRALGV----MHHHKDV--ISGNELSVYRSLLFGWSVQRN 223
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCK---NKE----MGKALEMKVEMLDKGIFP 116
V+EA +++ M G++P ++ +++ C+ N+ + +AL + +EM I P
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQP 283
Query: 117 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 176
+Y +L+ L RR+ E+ + ++M G P +Y +V L G F K +
Sbjct: 284 TSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIV 343
Query: 177 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 222
DE+I++G F P Y LI LC +R + AL++ M
Sbjct: 344 DEMIERG--------FRPERKFYYDLIGVLCGVERVNFALQLFEKM 381
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 1/192 (0%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 106
++ T+ + + E+A+GI +++ + + + IIS C + +AL +
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVM 196
Query: 107 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
D ++ Y L+ QR + EAR + Q+M G++P +++L+ C +
Sbjct: 197 HHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCER 256
Query: 167 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
L E + L P+ ++YN L+ L +R E+ +IL M
Sbjct: 257 NVNRNPSGLVPEALNI-MLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSG 315
Query: 227 LDPDEVSYSAVI 238
DPD SY V+
Sbjct: 316 CDPDTGSYYFVV 327
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 122/308 (39%), Gaps = 38/308 (12%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P +TY ++ E +K + E L P++ Y MI ++
Sbjct: 213 EPSAITYQIILKTFVEGDKFKEAE----EVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
E+A + M KG+ +Y+ ++S KE+ K + +M I PDV +Y
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYA 325
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG---EFSKVF------ 173
LLI+ RR EA +F+EML G+ P + Y+ L++A+ + G + VF
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 174 -----------------HLQD-EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 215
+ D E +K F V F P++VTY LI G ++
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445
Query: 216 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW-PLDQDTNESL 274
+E+ M + ++ + ++ R + A EM E+C P DQ L
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM---ESCGVPPDQKAKNVL 502
Query: 275 VKDLSNHD 282
+ S D
Sbjct: 503 LSLASTQD 510
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 28/285 (9%)
Query: 45 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
+PN +Y ++ + + A I R M G P A +Y I+ F + + +A E
Sbjct: 178 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 237
Query: 105 MKVEMLDKG---IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
+ +LD+ + PD Y ++I + +AR +F M+ +G+ TY++L+
Sbjct: 238 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 297
Query: 162 AYCLKGEFSKVF-HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 220
E SK++ +Q IQ P +V+Y LI +R +EAL +
Sbjct: 298 FETSYKEVSKIYDQMQRSDIQ------------PDVVSYALLIKAYGRARREEEALSVFE 345
Query: 221 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 280
M + + P +Y+ ++ AF + ++Q +T + + DL +
Sbjct: 346 EMLDAGVRPTHKAYNILLD----------AFAISGMVEQAKTV--FKSMRRDRIFPDLWS 393
Query: 281 HDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 325
+ T S + + AE K + P+ V+Y L+ G K
Sbjct: 394 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 17/237 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRI-VELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD VTY TLI +A ++ I +++Y +M LSP+ TY +I
Sbjct: 432 PDRVTYCTLIDIHAKAG--------FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ A + M ++G +P+ +Y+ ++ K + AL++ +M + G PD Y
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+++++L H L EA +F EM + P Y LV+ + G K + ++
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
G P++ T N+L+ + EA E+L+ M + L P +Y+ ++S
Sbjct: 604 G--------LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 15/248 (6%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 363 DGHTYTTMVGNLGRAKQ-------FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EA+ + M E G P +Y +I K + A++M M G+ PD Y ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I L L A LF EM+ +G +P TY+ +++ + + L ++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
F P VTY+ ++ L +EA + M + PDE Y ++ + +
Sbjct: 535 -------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 245 RELRKAFE 252
+ KA++
Sbjct: 588 GNVEKAWQ 595
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 121/324 (37%), Gaps = 82/324 (25%)
Query: 113 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
G D H Y ++ L ++ L EM+ G P TY+ L+ +Y ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 173 FHLQDEVIQKGFLPYYVTSFSPSLVTYNAL--IHGLCFFQRPDEALEILRGMPEMLLDPD 230
++ +++ + G P VTY L IH F D A+++ + M L PD
Sbjct: 419 MNVFNQMQEAG--------CKPDRVTYCTLIDIHAKAGFL--DIAMDMYQRMQAGGLSPD 468
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 290
+YS +I+ + L A +L EM +DQ +LV T++ +++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEM--------VDQGCTPNLV-------TYNIMMDL 513
Query: 291 YCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTI 347
+ + ALKL A + PD V+Y +++ ++ HC
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME------------------VLGHC--- 552
Query: 348 PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 407
G + EA M +N+ P+ VY LL+
Sbjct: 553 -------------------------------GYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 408 FDHCIGGNVHKAYDMYKEMLHYGF 431
GNV KA+ Y+ MLH G
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGL 605
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 17/237 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRI-VELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD VTY TLI +A ++ I +++Y +M LSP+ TY +I
Sbjct: 432 PDRVTYCTLIDIHAKAG--------FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ A + M ++G +P+ +Y+ ++ K + AL++ +M + G PD Y
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+++++L H L EA +F EM + P Y LV+ + G K + ++
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
G P++ T N+L+ + EA E+L+ M + L P +Y+ ++S
Sbjct: 604 G--------LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 15/248 (6%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 363 DGHTYTTMVGNLGRAKQ-------FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EA+ + M E G P +Y +I K + A++M M G+ PD Y ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I L L A LF EM+ +G +P TY+ +++ + + L ++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
F P VTY+ ++ L +EA + M + PDE Y ++ + +
Sbjct: 535 -------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 245 RELRKAFE 252
+ KA++
Sbjct: 588 GNVEKAWQ 595
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 121/324 (37%), Gaps = 82/324 (25%)
Query: 113 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
G D H Y ++ L ++ L EM+ G P TY+ L+ +Y ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 173 FHLQDEVIQKGFLPYYVTSFSPSLVTYNAL--IHGLCFFQRPDEALEILRGMPEMLLDPD 230
++ +++ + G P VTY L IH F D A+++ + M L PD
Sbjct: 419 MNVFNQMQEAG--------CKPDRVTYCTLIDIHAKAGFL--DIAMDMYQRMQAGGLSPD 468
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 290
+YS +I+ + L A +L EM +DQ +LV T++ +++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEM--------VDQGCTPNLV-------TYNIMMDL 513
Query: 291 YCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTI 347
+ + ALKL A + PD V+Y +++ ++ HC
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME------------------VLGHC--- 552
Query: 348 PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 407
G + EA M +N+ P+ VY LL+
Sbjct: 553 -------------------------------GYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 408 FDHCIGGNVHKAYDMYKEMLHYGF 431
GNV KA+ Y+ MLH G
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGL 605
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 17/237 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRI-VELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD VTY TLI +A ++ I +++Y +M LSP+ TY +I
Sbjct: 432 PDRVTYCTLIDIHAKAG--------FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ A + M ++G +P+ +Y+ ++ K + AL++ +M + G PD Y
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+++++L H L EA +F EM + P Y LV+ + G K + ++
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
G P++ T N+L+ + EA E+L+ M + L P +Y+ ++S
Sbjct: 604 G--------LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 15/248 (6%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 363 DGHTYTTMVGNLGRAKQ-------FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EA+ + M E G P +Y +I K + A++M M G+ PD Y ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I L L A LF EM+ +G +P TY+ +++ + + L ++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
F P VTY+ ++ L +EA + M + PDE Y ++ + +
Sbjct: 535 -------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 245 RELRKAFE 252
+ KA++
Sbjct: 588 GNVEKAWQ 595
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 121/324 (37%), Gaps = 82/324 (25%)
Query: 113 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
G D H Y ++ L ++ L EM+ G P TY+ L+ +Y ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 173 FHLQDEVIQKGFLPYYVTSFSPSLVTYNAL--IHGLCFFQRPDEALEILRGMPEMLLDPD 230
++ +++ + G P VTY L IH F D A+++ + M L PD
Sbjct: 419 MNVFNQMQEAG--------CKPDRVTYCTLIDIHAKAGFL--DIAMDMYQRMQAGGLSPD 468
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 290
+YS +I+ + L A +L EM +DQ +LV T++ +++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEM--------VDQGCTPNLV-------TYNIMMDL 513
Query: 291 YCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTI 347
+ + ALKL A + PD V+Y +++ ++ HC
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME------------------VLGHC--- 552
Query: 348 PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 407
G + EA M +N+ P+ VY LL+
Sbjct: 553 -------------------------------GYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 408 FDHCIGGNVHKAYDMYKEMLHYGF 431
GNV KA+ Y+ MLH G
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGL 605
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+N L+S +E+ +M + L P+ TY +I ++C
Sbjct: 212 PDLQTFNILLSGWKSSEEAEAFFE----------EMKGKGLKPDVVTYNSLIDVYCKDRE 261
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E+A ++ M E+ +P +Y+ +I + KA E+ EM + G +PDV AY
Sbjct: 262 IEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNA 321
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
I+ C RRL +A L EM+ +G+SP TY+ L + + + L ++
Sbjct: 322 AIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNE 381
Query: 184 FLP 186
LP
Sbjct: 382 CLP 384
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTYN+LI C K+ + Y +L +M E +P+ TY +I +
Sbjct: 244 PDVVTYNSLIDVYC---KDREIEKAY----KLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++A +L+ M E G P +Y+ I FC + +G A ++ EM+ KG+ P+ Y L
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++L L + +L+ ML P ++ L++ + + L ++++ KG
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 184 FLPY 187
F Y
Sbjct: 417 FGSY 420
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 86 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 145
++ ++ C+ K M A + L PD+ + +L L + EA F+EM
Sbjct: 183 FNALLRTLCQEKSMTDARNV-YHSLKHQFQPDLQTFNIL---LSGWKSSEEAEAFFEEMK 238
Query: 146 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 205
+G+ P TY++L++ YC E K + L D++ ++ +P ++TY +I G
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREE--------EETPDVITYTTVIGG 290
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
L +PD+A E+L+ M E PD +Y+A I F R L A +L EM +K
Sbjct: 291 LGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 13/218 (5%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
+ ++R C + +A + + + P +++ ++S + K +A EM
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
KG+ PDV Y LI + C R + +A L +M +P TY T++ L G+
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
K + E+ + G P + YNA I C +R +A +++ M + L P+
Sbjct: 299 KAREVLKEMKEYGCYP--------DVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPN 350
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 268
+Y+ +L +++EL + M E C P Q
Sbjct: 351 ATTYNLFFRVLSLANDLGRSWELYVRMLGNE-CLPNTQ 387
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 20/277 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
D V YN +I + +L+I + I E+ CV L P+ TY MI +C+ +
Sbjct: 163 ADTVAYNLVIRLFAD---KGDLNIADMLIKEMD---CV-GLYPDVITYTSMINGYCNAGK 215
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML--DKG--IFPDVH 119
+++A + + M++ ++ +YSRI+ CK+ +M +ALE+ EM D G I P+
Sbjct: 216 IDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAV 275
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF-HLQDE 178
Y L+IQ C +RR+ EA + M RG P T L++ E K L D+
Sbjct: 276 TYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDK 335
Query: 179 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
+++ G + FS + V+ L +R +EA +I R M + PD ++ S V
Sbjct: 336 LVKLGGVSLS-ECFSSATVS-------LIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVF 387
Query: 239 SGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 275
+ F L E+++K+ +D D + L+
Sbjct: 388 RELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLL 424
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 108/252 (42%), Gaps = 39/252 (15%)
Query: 4 PDCVTYNTLISAACEAEK------------NHNL---SIPYVRIVE-------------L 35
PD +TY ++I+ C A K H+ S+ Y RI+E L
Sbjct: 198 PDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALEL 257
Query: 36 YHQMCVRE----LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 91
+M + +SPN TY +I+ FC++ RVEEA+ +L M +G P+ + +I
Sbjct: 258 LAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQ 317
Query: 92 RFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
+N E KAL ++ L K G + L +R EA +F+ ML+RG+
Sbjct: 318 GVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVR 377
Query: 151 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 210
P G + CL + F L E+ +K V S S + + L+ GLC
Sbjct: 378 PDGLACSHVFRELCLLERYLDCFLLYQEIEKKD-----VKSTIDSDI-HAVLLLGLCQQG 431
Query: 211 RPDEALEILRGM 222
EA ++ + M
Sbjct: 432 NSWEAAKLAKSM 443
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 11/211 (5%)
Query: 32 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 91
++E Y + E N T R ++ L N +EA+ +LR E + +Y+ +I
Sbjct: 117 VIESYRK---EECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIR 173
Query: 92 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 151
F ++ A + EM G++PDV Y +I C+ ++ +A L +EM
Sbjct: 174 LFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVL 233
Query: 152 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK--GFLPYYVTSFSPSLVTYNALIHGLCFF 209
TY ++E C G+ + L E+ ++ G L SP+ VTY +I C
Sbjct: 234 NSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGL------ISPNAVTYTLVIQAFCEK 287
Query: 210 QRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+R +EAL +L M P+ V+ +I G
Sbjct: 288 RRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 118/276 (42%), Gaps = 35/276 (12%)
Query: 194 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
P ++TY ++I+G C + D+A + + M + + V+YS ++ G + ++ +A EL
Sbjct: 198 PDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALEL 257
Query: 254 KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQY---L 310
EM++++ L+ N T++ ++ +C + + E AL + + +
Sbjct: 258 LAEMEKED---------GGGLIS--PNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 311 PDSVSYCLLLNGLHK-----KATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEF 365
P+ V+ C+L+ G+ + KA S+ +L+ V+ S + I +++ E
Sbjct: 307 PNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEK 366
Query: 366 KSVVELVKGFRMRGLVNEAARARDTMLHR----------------NYRPEGAVYNLLIFD 409
+ LV+G R GL +L R + ++ +L+
Sbjct: 367 IFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLG 426
Query: 410 HCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 445
C GN +A + K ML + V +I+AL
Sbjct: 427 LCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEAL 462
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 75/170 (44%), Gaps = 7/170 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIV----ELYHQMCVRELSPNETTYRCMIRLFC 59
PD TY LIS+ C R + ++ +M R P+ TY C+I C
Sbjct: 235 PDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCC 294
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM--LDKGIFPD 117
NR+ A+ + M KG P+ +Y+ I + E+ A+EM M L G+ P
Sbjct: 295 KTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PG 353
Query: 118 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 167
Y LI L RR EARDL EM+ G+ P TY + +A +G
Sbjct: 354 SSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 20/215 (9%)
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL--SPHADSYSRIISRF 93
+++M P+ Y +I C ++A +L M G P +Y+ +IS +
Sbjct: 188 FYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSY 247
Query: 94 CK-----------NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 142
C+ + M +A M EML +G PDV Y LI C R+ A +LF+
Sbjct: 248 CRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFE 307
Query: 143 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 202
+M +G P TY++ + Y + E + + + G P TY L
Sbjct: 308 DMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG-------HGVPGSSTYTPL 360
Query: 203 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 237
IH L +R EA +++ M E L P E +Y V
Sbjct: 361 IHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 116 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM--SPGGRTYDTLVEAYCLKGEFS--- 170
PDV+AY +I LC +AR L +M L G P TY L+ +YC G +
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 171 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
K + + F F P +VTYN LI G C R ALE+ M P+
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 231 EVSYSAVISGFRRIRELRKAFELKLEMDQ 259
+V+Y++ I + E+ A E+ M +
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 30/266 (11%)
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L++ L + + EA F M P Y+T++ A C G F K L D++ G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFF-----------QRPDEALEILRGMPEMLLDPDEV 232
F + P TY LI C + +R EA + R M PD V
Sbjct: 231 F------RYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 233 SYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 292
+Y+ +I G + + +A EL +M K C P +Q T S ++ + S+ N+
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTK-GCVP-NQVTYNSFIR-------YYSVTNE-- 333
Query: 293 AEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYII 352
E EM ++ +P S +Y L++ L + T R A L + +P
Sbjct: 334 IEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVE--TRRAAEARDLVVEMVEAGLVPREYT 391
Query: 353 YDILIEKCANNEFKSVVELVKGFRMR 378
Y ++ + ++ S ++ RMR
Sbjct: 392 YKLVCDALSSEGLASTLDEELHKRMR 417
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIV-ELYHQMCVRELSPNETTYRCMIRLFCD 60
+ PD TY L+S+ + N+ Y+ V L QM + P+ +I+ +
Sbjct: 176 SKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAK 235
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
V+EA+ + + MA G P+A +YS ++ C+ +G+ L EM KG+ P+
Sbjct: 236 CLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSC 295
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 178
Y +LI L +RRL EA ++ +ML +SP TY+T++ C G S+ + +E
Sbjct: 296 YMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 29/265 (10%)
Query: 9 YNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR----NRV 64
Y+T+I A ++N+ + ++ +M V Y C+IR C R NR
Sbjct: 111 YHTMIKQAITGKRNNFVETLIEEVIAGACEMSV-------PLYNCIIRFCCGRKFLFNRA 163
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCK--NK------EMGKALEMKVEMLDKGIFP 116
+ +++ P ++Y+ ++S K NK + + +M G+ P
Sbjct: 164 FDVYN--KMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIP 221
Query: 117 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 176
D ++I+ + EA +F+EM L G P TY LV+ C KG +
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 177 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 236
E+ KG +P + Y LI L +R DEA+E++ M L PD ++Y+
Sbjct: 282 KEMQVKGMVP--------NGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 237 VISGFRRIRELRKAFELKLEMDQKE 261
V++ R +A E+ E +++
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRD 358
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+ ++ +M + PN TY +++ C++ RV + +G + M KG+ P+ Y +I
Sbjct: 243 IRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICS 302
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
+ + +A+E+ +ML + PD+ Y ++ LC R EA ++ +E R G
Sbjct: 303 LSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMG 362
Query: 153 GRTYDTLVE 161
R Y TL++
Sbjct: 363 ERNYRTLMD 371
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 115/232 (49%), Gaps = 20/232 (8%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVR--ELSPNETTYRCMIRLFC 59
T V++N L++A C KN + ++ +L+ ++ R ++ P++ +Y +I+ +C
Sbjct: 133 TPRSAVSFNALLNA-CLHSKN------FDKVPQLFDEIPQRYNKIIPDKISYGILIKSYC 185
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
D E+A+ I+R M KG+ +++ I+S K E+ A + EM+ KG D
Sbjct: 186 DSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNA 245
Query: 120 AYGLLIQLLCHQRRLLE-ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 178
AY ++++ Q+ E ++L +EM G+ P +Y+ L+ AYC +G + DE
Sbjct: 246 AYN--VRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERG-------MLDE 296
Query: 179 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 230
+K + + +P+ T+ LI LC+ + ++ I + M PD
Sbjct: 297 A-KKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPD 347
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 11/196 (5%)
Query: 48 ETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 107
E Y +IR + + A+ M + G A S++ +++ +K K ++
Sbjct: 102 EPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFD 161
Query: 108 EMLDK--GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
E+ + I PD +YG+LI+ C +A ++ ++M +GM + T++ +
Sbjct: 162 EIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYK 221
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
KGE +L +E+++KG YN I + P+ E++ M M
Sbjct: 222 KGELEVADNLWNEMVKKGC--------ELDNAAYNVRIMS-AQKESPERVKELIEEMSSM 272
Query: 226 LLDPDEVSYSAVISGF 241
L PD +SY+ +++ +
Sbjct: 273 GLKPDTISYNYLMTAY 288
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
+ EL+ + + PN +Y +++ FC + + A + M E+ + P DSY +I
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 150
FC+ ++ A+E+ +ML+KG PD LI LC Q E + +EM+ +G S
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFS 288
Query: 151 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
P + LV+ +C G+ + + + V++ G
Sbjct: 289 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 24/190 (12%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE-MGKALEMKVEMLDK 112
+I+++ + E+ + M E +P +RI+ ++ + KA E+
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 113 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 172
G+ P+ +Y LL+Q C L A LF +ML R + P +Y L++ +C KG+ +
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 173 FHLQDEVIQKGFLP-----------------------YYVTSFSPSLVTYNALIHGLCFF 209
L D+++ KGF+P FSP N L+ G C F
Sbjct: 245 MELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSF 304
Query: 210 QRPDEALEIL 219
+ +EA +++
Sbjct: 305 GKVEEACDVV 314
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +YN L+ A C N +LSI Y +L+ +M R++ P+ +Y+ +I+ FC + +
Sbjct: 188 PNTRSYNLLMQAFC---LNDDLSIAY----QLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V A+ +L M KG P +I C + + EM+ KG P
Sbjct: 241 VNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 296
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV-FHLQDEV 179
L++ C ++ EA D+ + ++ G + T++ ++ C + E K+ L+D V
Sbjct: 297 LVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 353
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 6 CVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVR--ELSPNETTYRCMIRLFCDRNR 63
V++N L++A ++ + R+ +L+ + R ++P++ +Y +I+ +CD +
Sbjct: 137 VVSFNALLAACLHSDL-------FERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGK 189
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E+A+ I+R M KG+ +++ I+ KN + +A + +EM++KG D Y
Sbjct: 190 PEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYN- 248
Query: 124 LIQLLCHQRRLLE-ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++L+ + E ++L +EM G+ P +Y+ L+ AYC+KG S+ + + + Q
Sbjct: 249 -VRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ- 306
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 220
P+ T+ LI LC D+ L + +
Sbjct: 307 -----------PNAATFRTLIFHLCINGLYDQGLTVFK 333
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 116/252 (46%), Gaps = 17/252 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE--LSPNETTYRCMIRLFCDR 61
PD V +N LISA + S R ++ +M + P+ + +++ C+
Sbjct: 570 PDRVVFNALISACGQ-------SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+VE A + +++ + G+ + Y+ ++ K+ + A + +M +K + PD +
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFF 682
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
LI + H + L EA + Q+ +G+ G +Y +L+ A C ++ K L +++
Sbjct: 683 SALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
P++ T NALI LC + +A+E L + + L P+ ++YS ++
Sbjct: 743 --------IKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLAS 794
Query: 242 RRIRELRKAFEL 253
R + +F+L
Sbjct: 795 ERKDDFEVSFKL 806
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
+Y M ++++P+E + +I + ++EA GIL+ +G+ SYS ++ C
Sbjct: 666 IYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACC 725
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
K+ KALE+ ++ + P + LI LC +L +A + E+ G+ P
Sbjct: 726 NAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTI 785
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 189
TY L+ A K +F F L + G P +
Sbjct: 786 TYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 144/337 (42%), Gaps = 35/337 (10%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
DC Y TLIS+ ++ K + E++HQM + N T+ +I +V
Sbjct: 501 DCKLYTTLISSCAKSGKVDAM-------FEVFHQMSNSGVEANLHTFGALIDGCARAGQV 553
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG--IFPDVHAYG 122
+A G ++ K + P ++ +IS ++ + +A ++ EM + I PD + G
Sbjct: 554 AKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIG 613
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
L++ C+ ++ A++++Q + G+ Y V + G++ + ++ +K
Sbjct: 614 ALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK 673
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
+P V ++ALI + DEA IL+ + +SYS+++
Sbjct: 674 --------DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACC 725
Query: 243 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 302
++ +KA EL ++ +K T ++L+ C ++ A++
Sbjct: 726 NAKDWKKALELYEKIKS---------------IKLRPTISTMNALITALCEGNQLPKAME 770
Query: 303 LRYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLL 336
+ + L P++++Y +L+ +K + +LL
Sbjct: 771 YLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 41/245 (16%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
L+P +T+ ++ + +E A G+LRL+ E G++ Y+ +IS K+ ++
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
E+ +M + G+ ++H +G LI ++ +A + + + + P ++ L+ A
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI----- 218
G + F + E + P ++ AL+ C + + A E+
Sbjct: 583 GQSGAVDRAFDVLAE------MKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIH 636
Query: 219 ---LRGMPEML---------------------------LDPDEVSYSAVISGFRRIRELR 248
+RG PE+ + PDEV +SA+I + L
Sbjct: 637 KYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 249 KAFEL 253
+AF +
Sbjct: 697 EAFGI 701
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+N LI C+A K + + M V E +P+ TY + +C
Sbjct: 271 PDARTFNILIHGFCKARK-------FDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+L M E G +P+ +Y+ ++ K+K++ +AL + +M + G PD Y
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 162
LI +L R +A ++F++M +G+ Y+T++ A
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 101/231 (43%), Gaps = 23/231 (9%)
Query: 9 YNTLISAACEAEKNHNLSIPYVRI------------VELYHQMCVR---ELSPNETTYRC 53
YN + A E EK++ + + + +E H++ ++ + P+ T+
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNI 278
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 113
+I FC + ++A ++ LM +P +Y+ + +CK + + EM EM + G
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 114 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
P+V Y +++ L +++ EA ++++M G P + Y +L+ G F
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAA 398
Query: 174 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
+ +++ +G ++ YN +I R + AL +L+ M +
Sbjct: 399 EIFEDMTNQG--------VRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 130/282 (46%), Gaps = 27/282 (9%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVR-IVELYHQMCVRELSPNETTYRCMIRLFC 59
M D + ++N+++S+ + + YV + L +M + L P+ T+ ++ +
Sbjct: 150 MKDRNLSSWNSILSSYTK--------LGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYA 201
Query: 60 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK--NKEMGKALEMKVEMLDKGIFPD 117
+ ++A+ +L+ M GL P S S ++ + + ++GKA+ + L ++ D
Sbjct: 202 SKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYI--LRNQLWYD 259
Query: 118 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 177
V+ LI + L AR +F M + + L A LK + + ++
Sbjct: 260 VYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEK 319
Query: 178 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 237
E I+ P +T+N+L G +P++AL+++ M E + P+ VS++A+
Sbjct: 320 EGIK------------PDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 238 ISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS 279
SG + R A ++ ++M Q+E P + T +L+K L
Sbjct: 368 FSGCSKNGNFRNALKVFIKM-QEEGVGP-NAATMSTLLKILG 407
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 111/258 (43%), Gaps = 42/258 (16%)
Query: 27 IPYVRIVELYHQMCVRELSPNET-----TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSP 81
+PY R+V + M + + + +Y C+++ +A ++ M ++G+ P
Sbjct: 276 LPYARMV--FDMMDAKNIVAWNSLVSGLSYACLLK---------DAEALMIRMEKEGIKP 324
Query: 82 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 141
A +++ + S + + KAL++ +M +KG+ P+V ++ + A +F
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 142 QEMLLRGMSPGGRTYDTL---------------VEAYCLKGEF----SKVFHLQDEVIQK 182
+M G+ P T TL V +CL+ L D +
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 444
Query: 183 GFLPYYVTSF----SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
G L + F + SL ++N ++ G F R +E + M E ++PD +++++V+
Sbjct: 445 GDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Query: 239 SGFRR---IRELRKAFEL 253
S + ++E K F+L
Sbjct: 505 SVCKNSGLVQEGWKYFDL 522
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
V EA I R M ++P+ DSYS +IS F K + +L + EM +G+ P + Y
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+ +L + EA L +++ G+ P TY++++ C G+ ++ +I +
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISE- 393
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
+ SP++ T++A + + F ++ LE+L M L P E ++ ++ +
Sbjct: 394 -------NLSPTVDTFHAFLEAVNF----EKTLEVLGQMKISDLGPTEETFLLILGKLFK 442
Query: 244 IRELRKAFELKLEMDQKE 261
++ A ++ EMD+ E
Sbjct: 443 GKQPENALKIWAEMDRFE 460
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 113/256 (44%), Gaps = 18/256 (7%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +N +++ C N+ ++ +M ++PN+ +Y MI F +
Sbjct: 257 DVEGFNVILNGWC------NIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNL 310
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+++ + M ++GL+P + Y+ ++ + +A+++ ++ ++G+ PD Y +
Sbjct: 311 FDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSM 370
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I+ LC +L AR++ M+ +SP T+ +EA F K + ++
Sbjct: 371 IRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQM----- 421
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
++ P+ T+ ++ L ++P+ AL+I M + + Y A I G
Sbjct: 422 ---KISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSC 478
Query: 245 RELRKAFELKLEMDQK 260
L KA E+ EM K
Sbjct: 479 GWLEKAREIYSEMKSK 494
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 13/182 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTYN++I CEA K + R V M LSP T+ F +
Sbjct: 362 PDSVTYNSMIRPLCEAGK-----LDVARNV--LATMISENLSPTVDTFHA----FLEAVN 410
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E+ + +L M L P +++ I+ + K K+ AL++ EM I + Y
Sbjct: 411 FEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLA 470
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG-EFSKVFHLQDEVIQK 182
IQ L L +AR+++ EM +G G L+E +KG SK +LQ Q+
Sbjct: 471 TIQGLLSCGWLEKAREIYSEMKSKGFV-GNPMLQKLLEEQKVKGVRKSKRMNLQKVGSQE 529
Query: 183 GF 184
G+
Sbjct: 530 GY 531
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 15/228 (6%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLF-------CDRNRVEEAVGILRLMAEKGLSPHADS 85
+E+Y + PN +Y ++ F R V +L M +KGL P
Sbjct: 401 LEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRH 460
Query: 86 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 145
++ ++ K E A+++ M+D G P V +YG L+ L + EA ++ M+
Sbjct: 461 WNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMI 520
Query: 146 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 205
G+ P Y T+ + +F+ + L E+ KG PS+VT+NA+I G
Sbjct: 521 KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI--------EPSVVTFNAVISG 572
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
A E M ++P+E++Y +I + R A+EL
Sbjct: 573 CARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 12/213 (5%)
Query: 49 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE-MKV 107
+Y MI + + + + + M ++ + P Y+ ++ K + +A MK
Sbjct: 303 VSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKT 362
Query: 108 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 167
+KGI P+V Y LI+ LC R+ EA+ +F EML +G+ P RTY + G
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG 421
Query: 168 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 227
E +VF L ++ + G P++ TY LI LC ++ D L + M E +
Sbjct: 422 E--EVFELLAKMRKMG--------CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTV 471
Query: 228 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
PD SY +I G ++ +A+ EM K
Sbjct: 472 GPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ VTYN+LI C+A K +++ +M + L P TY +R+
Sbjct: 370 EPNVVTYNSLIKPLCKARKTEEAK-------QVFDEMLEKGLFPTIRTYHAFMRIL---R 419
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
EE +L M + G P ++Y +I + C+ ++ L + EM +K + PD+ +Y
Sbjct: 420 TGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYI 479
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 166
++I L ++ EA ++EM +GM P D + + K
Sbjct: 480 VMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGK 523
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 17/188 (9%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE----LSPNETTYRCMIRLF 58
+PD YN ++ A +A + E + M E + PN TY +I+
Sbjct: 334 EPDRKVYNAVVHALAKAS----------FVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 383
Query: 59 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 118
C + EEA + M EKGL P +Y + R + E + E+ +M G P V
Sbjct: 384 CKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM-RILRTGE--EVFELLAKMRKMGCEPTV 440
Query: 119 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 178
Y +LI+ LC R L+ EM + + P +Y ++ L G+ + + E
Sbjct: 441 ETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKE 500
Query: 179 VIQKGFLP 186
+ KG P
Sbjct: 501 MKDKGMRP 508
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 157/401 (39%), Gaps = 64/401 (15%)
Query: 29 YVRIVELYHQMC------------------VRELSP---NETTYRCMIRLFCDRNRVEEA 67
YVR V YH M +R+ SP N T MIR +C + V +A
Sbjct: 157 YVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKA 216
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
+ L D + ++S C+ K + A + DK F D ++ +++
Sbjct: 217 INTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF-DAKSFNIVLNG 275
Query: 128 LCHQ-RRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 186
C+ EA ++ EM G+ +Y +++ Y G +KV L D + ++
Sbjct: 276 WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKE---- 331
Query: 187 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM-PEMLLDPDEVSYSAVISGFRRIR 245
P YNA++H L EA +++ M E ++P+ V+Y+++I + R
Sbjct: 332 ----CIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 246 ELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY 305
+ +A ++ EM +K L + + F ++ E+ E+ K+R
Sbjct: 388 KTEEAKQVFDEMLEK------------GLFPTIRTYHAFMRILR--TGEEVFELLAKMR- 432
Query: 306 QAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEF 365
+ P +Y +L+ L + F LLL +D + EK +
Sbjct: 433 KMGCEPTVETYIMLIRKLCR--WRDFDNVLLL---------------WDEMKEKTVGPDL 475
Query: 366 KSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLL 406
S + ++ G + G + EA M + RP V +++
Sbjct: 476 SSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMI 516
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 9/234 (3%)
Query: 26 SIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 85
++P + + +M +PN T+ ++ ++ + ++ + V L L+A++ S
Sbjct: 677 ALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY-GKAKLFKKVNELFLLAKRHGVVDVIS 735
Query: 86 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 145
Y+ II+ + KNK+ M G + AY L+ +++ + R + + M
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
Query: 146 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 205
P TY+ ++ Y +G +V + E+ + G P L +YN LI
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL--------GPDLCSYNTLIKA 847
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 259
+EA+ +++ M + PD+V+Y+ +++ RR E +A + L M Q
Sbjct: 848 YGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQ 901
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ VT+N L+ +A+ + ++ EL+ + R + +Y +I +
Sbjct: 697 PNTVTFNVLLDVYGKAK-------LFKKVNELF-LLAKRHGVVDVISYNTIIAAYGKNKD 748
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++ M G S ++Y+ ++ + K+K+M K + M PD + Y +
Sbjct: 749 YTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 808
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I + Q + E D+ +E+ G+ P +Y+TL++AY + G + L E+ +
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRN 868
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 220
+ P VTY L+ L +R DE LE ++
Sbjct: 869 II--------PDKVTYTNLVTAL---RRNDEFLEAIK 894
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 17/223 (7%)
Query: 42 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 101
R L+ N T+ M+ +C + EEA+ + R M + SP S++ ++++ C N+ + +
Sbjct: 344 RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAE 403
Query: 102 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 161
A ++ EM +K + PD + YGLL+ + ++ E ++ M+ + P Y+ L +
Sbjct: 404 AEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQD 463
Query: 162 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 221
G+ K F V+ Y ++ L R DE L+I+
Sbjct: 464 QLIKAGKLDDA---------KSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDE 514
Query: 222 MPEMLLDPDEVSYSAVISGFRRIRELRKA---FELKLEMDQKE 261
M LD D V S + F + ELRK +L+ M++KE
Sbjct: 515 M----LDDDTVRVSEELQEFVK-EELRKGGREGDLEKLMEEKE 552
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 13/261 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +TYN + A + K P + + + L+P+ T+R +++ +
Sbjct: 163 PNIITYNLIFQAYLDVRK------PEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDN 216
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK--GIFPDVHAY 121
+E+A+ I MA KG YS ++ KN + L++ E+ +K G D Y
Sbjct: 217 LEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVY 276
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRG--MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
G L++ + EA + ++E + + Y+ ++EA G+F + L D V
Sbjct: 277 GQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAV 336
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
++ P ++ +L T+N +++G C + +EA+E+ R M + PD +S++ +++
Sbjct: 337 KKEHNPPRHLAV---NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMN 393
Query: 240 GFRRIRELRKAFELKLEMDQK 260
L +A +L EM++K
Sbjct: 394 QLCDNELLAEAEKLYGEMEEK 414
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 180/480 (37%), Gaps = 88/480 (18%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P T NT+++A K Y +++L+ + ++PN TY + + + D +
Sbjct: 128 PTIFTVNTVLAAQLRQAK-------YGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRK 180
Query: 64 VEEAVGILRLMAEKG-LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
E A+ +L + L+P ++ ++ N + KA+E+K +M KG D Y
Sbjct: 181 PEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYS 240
Query: 123 LLIQLLCHQRRLLEARDLFQEML--LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
L+ L+QE+ L G G Y L++ Y +K + +E +
Sbjct: 241 YLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAV 300
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+ + S + YN ++ L + DEAL++ + AV
Sbjct: 301 GEN------SKVRMSAMAYNYVLEALSENGKFDEALKL---------------FDAVKKE 339
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 300
R L N TF+ +VN YCA K E A
Sbjct: 340 HNPPRHL------------------------------AVNLGTFNVMVNGYCAGGKFEEA 369
Query: 301 LKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILI 357
+++ Q PD++S+ L+N L A +L + + P Y +L+
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKL--YGEMEEKNVKPDEYTYGLLM 427
Query: 358 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVH 417
+ C FK G ++E A TM+ N RP AVYN L G +
Sbjct: 428 DTC----FK-----------EGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLD 472
Query: 418 KA---YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQLK 474
A +DM L + F +++AL R +EM ++ L + SE+L+
Sbjct: 473 DAKSFFDMMVSKLKMDDEAYKF----IMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQ 528
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D N LI CE+ NL ++L + ++ PN T+ +IR FC++ +
Sbjct: 201 DACCLNILIKGLCES---GNLEAA----LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKF 253
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
EEA +L M ++ + P +++ +IS K + + +++ M KG P+ Y +
Sbjct: 254 EEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEV 313
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
+ L ++R LEA+++ +M+ GM P +Y +V C ++ + +++ GF
Sbjct: 314 LYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Query: 185 LP 186
+P
Sbjct: 374 VP 375
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 105/244 (43%), Gaps = 11/244 (4%)
Query: 24 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 83
N+ P + H ++ P E+ Y MI F +E ++R + + +
Sbjct: 71 NVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFS 130
Query: 84 DSYSRIISRFCKN--KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 141
+ + + R N + +A+E+ M D G +P ++ ++ LL + E +F
Sbjct: 131 EEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIF 190
Query: 142 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 201
G+ + L++ C G L DE Q+ P+++T++
Sbjct: 191 VSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQ--------KSRPNVMTFSP 242
Query: 202 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 261
LI G C + +EA ++L M + ++PD ++++ +ISG R+ + + +L LE + +
Sbjct: 243 LIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDL-LERMKVK 301
Query: 262 TCWP 265
C P
Sbjct: 302 GCEP 305
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R+ A+ IL M + G P + S++ I++ K + ++ V G+ D
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
+LI+ LC L A L E + P T+ L+ +C KG+F + F L + + ++
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
P +T+N LI GL R +E +++L M +P+ +Y V+ G
Sbjct: 267 --------RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 8/185 (4%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 113
+I+ C+ +E A+ +L ++ P+ ++S +I FC + +A ++ M +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 114 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
I PD + +LI L + R+ E DL + M ++G P TY ++ K +
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 174 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 233
+ ++I G PS ++Y ++ GLC + E +LR M P +
Sbjct: 328 EMMSQMISWG--------MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLM 379
Query: 234 YSAVI 238
+ V+
Sbjct: 380 WWKVV 384
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 41/245 (16%)
Query: 194 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
PS ++N +++ L + DE +I P++ ++ D + +I G L A +L
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 254 KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL--RYQAQYL- 310
E Q+ K N TFS L+ +C + K E A KL R + + +
Sbjct: 225 LDEFPQQ---------------KSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIE 269
Query: 311 PDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSY---IIYDILIEKCANNEFKS 367
PD++++ +L++GL KK LL V C P ++Y +L +K
Sbjct: 270 PDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKK-------- 321
Query: 368 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 427
R L EA M+ RP Y ++ C +V + + ++M+
Sbjct: 322 ----------RNL--EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMV 369
Query: 428 HYGFV 432
++GFV
Sbjct: 370 NHGFV 374
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 58 FCDRNRVEEAVGI---LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 114
FC R + VG+ L+ M +G P+ + + +I+ C+ + +A ++ M+ GI
Sbjct: 184 FCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGI 243
Query: 115 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 174
V+ + +L+ +A DLF +M+ G SP TY +L++ + G + F
Sbjct: 244 SVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFT 303
Query: 175 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 234
+ +V +G +P +V N +IH R +EA ++ + + L PD+ ++
Sbjct: 304 VLSKVQSEG--------LAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 235 SAVIS 239
++++S
Sbjct: 356 ASILS 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
PN + ++RL C V EA ++ LM G+S + +S ++S F ++ E KA+++
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
+M+ G P++ Y LI+ + EA + ++ G++P + ++ Y
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 222
G F E +K F P T+ +++ LC + D I G+
Sbjct: 330 LGRF--------EEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 29/288 (10%)
Query: 39 MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 98
M +S + + ++ F ++AV + M + G SP+ +Y+ +I F
Sbjct: 238 MICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGM 297
Query: 99 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 158
+ +A + ++ +G+ PD+ L+I R EAR +F + R + P T+ +
Sbjct: 298 VDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFAS 357
Query: 159 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 218
++ + CL G+F V + + T F LVT N L + AL++
Sbjct: 358 ILSSLCLSGKFDLVPRITHGI---------GTDF--DLVTGNLLSNCFSKIGYNSYALKV 406
Query: 219 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL-KLEMDQKETCWPLDQDTNESLVKD 277
L M D +Y+ +S R R A ++ K+ + +K+ LD + +++
Sbjct: 407 LSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKK---HLDAHFHSAIIDS 463
Query: 278 LSNHDTFSSLVNDY--CAEDKAEMALKLRYQAQYLPDSVSYCLLLNGL 323
L +++ V+ + C +K Y D VSY + + GL
Sbjct: 464 LIELGKYNTAVHLFKRCILEK------------YPLDVVSYTVAIKGL 499
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
E++ +M L PN M+ C V+EA+ + LM +KG P Y+ ++ F
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
CK ++ A + +M + GI P+ +YG+L+Q L + L +A EML G SP
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYY--VTSFSPSLVTYNALIHGLCFFQR 211
T+ LV+A C + D + QKGF V F + +L F ++
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKK 296
Query: 212 PDE 214
P E
Sbjct: 297 PTE 299
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
E++ +M L PN M+ C V+EA+ + LM +KG P Y+ ++ F
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
CK ++ A + +M + GI P+ +YG+L+Q L + L +A EML G SP
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYY--VTSFSPSLVTYNALIHGLCFFQR 211
T+ LV+A C + D + QKGF V F + +L F ++
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKK 296
Query: 212 PDE 214
P E
Sbjct: 297 PTE 299
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 12/218 (5%)
Query: 21 KNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLS 80
K +NL Y ++ +M VR +SPN+ T + FC V+EA+ + R +E G +
Sbjct: 369 KENNLDGVY----DILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFA 424
Query: 81 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 140
P A SY+ +I C N+ + +A ++ +D+G F + L LC + + AR+L
Sbjct: 425 PTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAREL 484
Query: 141 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 200
R + P ++ A C G+ + +E+ K + S +
Sbjct: 485 VIAAAERDLLPKRIAGCKIISALCDVGKVEDALMI-NELFNK-------SGVDTSFKMFT 536
Query: 201 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
+LI+G R D A +++ M E P Y VI
Sbjct: 537 SLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVI 574
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 135/329 (41%), Gaps = 43/329 (13%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
D D Y+ L++A E + + + ++ Q+ VR T+ +++ FC +
Sbjct: 214 DLDSFGYHVLLNALVEEKCFDSFDV-------IFDQISVRGFVC-AVTHSILVKKFCKQG 265
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+++EA LR + + ++ C ++ +A ++ E+ G AY
Sbjct: 266 KLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYN 325
Query: 123 LLIQLLCHQRRLLEARDLFQEML-LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+ I+ L L D Q++ L G Y+++V + V+ + E++
Sbjct: 326 IWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMV 385
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRP---DEALEILRGMPEMLLDPDEVSYSAVI 238
+G SP+ T NA LCFF + DEALE+ R E+ P +SY+ +I
Sbjct: 386 RG--------VSPNKKTMNA---ALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLI 434
Query: 239 SGFRRIRELRKAFE-LKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKA 297
+ +A++ LK +D+ TFS+L N C + K
Sbjct: 435 HTLCANESVEQAYDVLKGAIDRGH----------------FLGGKTFSTLTNALCWKGKP 478
Query: 298 EMALKLRYQA---QYLPDSVSYCLLLNGL 323
+MA +L A LP ++ C +++ L
Sbjct: 479 DMARELVIAAAERDLLPKRIAGCKIISAL 507
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 7/205 (3%)
Query: 45 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
S ++ Y + R R +EA I + M G P +YS+++ CK K + +A
Sbjct: 367 SLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARG 426
Query: 105 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
+ +M +G FPD+ + +LIQ C L +A F ML +G D L++ +
Sbjct: 427 VLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFV 486
Query: 165 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
+ +F E+++ + P TY LI L ++ +EAL++L+ M +
Sbjct: 487 IHNKFEGASIFLMEMVKNA-------NVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKK 539
Query: 225 MLLDPDEVSYSAVISGFRRIRELRK 249
++ ++ F + + +K
Sbjct: 540 QNYPAYAEAFDGYLAKFGTLEDAKK 564
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 119/296 (40%), Gaps = 33/296 (11%)
Query: 49 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 108
TY +R+ N V E ++ M G D+Y ++ +F K++ M + +++
Sbjct: 264 VTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEY 323
Query: 109 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR--------GMSPGGRTYDTLV 160
M+D P + LL++ L DL +++ R G S YD +
Sbjct: 324 MMDGPFKPSIQDCSLLLRYLSGSPN----PDL--DLVFRVSRKYESTGKSLSKAVYDGIH 377
Query: 161 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 220
+ G F + + + G+ P +TY+ L+ GLC +R +EA +L
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGY--------EPDNITYSQLVFGLCKAKRLEEARGVLD 429
Query: 221 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 280
M PD +++ +I G + EL KA M +K + +D + + L+
Sbjct: 430 QMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEK--GFDIDSNLLDVLIDGFVI 487
Query: 281 HDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL 336
H+ F E + +++ A P +Y LL++ L K S A LL
Sbjct: 488 HNKF---------EGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLL 534
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD +TY+ L+ C+A++ + R V QM + P+ T+ +I+ C N
Sbjct: 402 EPDNITYSQLVFGLCKAKR-----LEEARGV--LDQMEAQGCFPDIKTWTILIQGHCKNN 454
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFC-KNKEMGKALEMKVEMLDKGIFPDVHAY 121
+++A+ M EKG ++ +I F NK G ++ + + + + P Y
Sbjct: 455 ELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTY 514
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
LLI L ++ EA DL Q M + Y EA+ G +K L+D
Sbjct: 515 KLLIDKLLKIKKSEEALDLLQMM-------KKQNYPAYAEAF--DGYLAKFGTLED---A 562
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGL 206
K FL + SPS Y +I
Sbjct: 563 KKFLDVLSSKDSPSFAAYFHVIEAF 587
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 7 VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEE 66
+ YN LI A KNH + + ++ +M R + P+ETT+ ++ +
Sbjct: 910 IIYNMLIFYMFRA-KNH------LEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSS 962
Query: 67 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM----------------- 109
++ L M KG+ P+ S + S C N ++ KAL++ M
Sbjct: 963 SLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIV 1022
Query: 110 ---LDKGIFPDVH--------------AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
+ KG P Y +I+ L + L A L ML PG
Sbjct: 1023 ETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPG 1082
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
+YD+++ + K E+++ G SPS+ T++ L+H C +
Sbjct: 1083 SSSYDSVINGLLRYNQLDKAMDFHTEMVELG--------LSPSISTWSGLVHKFCEACQV 1134
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
E+ +++ M + P + + VI FR + KA E+ +EM QK + +D +T+
Sbjct: 1135 LESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEM-MEMMQK-CGYEVDFETHW 1192
Query: 273 SLVKDLSN 280
SL+ ++S+
Sbjct: 1193 SLISNMSS 1200
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 110/277 (39%), Gaps = 33/277 (11%)
Query: 71 LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH 130
LR+M GLS + Y+ + +CK K E+ M+ K I V +Y ++ +C
Sbjct: 826 LRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCL 885
Query: 131 QRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 190
+ + L A L + +LL +PGG ++ Y + + HL+ + K L
Sbjct: 886 EPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAK----NHLE---VNKVLLEMQGR 938
Query: 191 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 250
P T+N L+HG +L L M + P+ S AV S +++KA
Sbjct: 939 GVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKA 998
Query: 251 FELKLEMDQKETCWPLDQDTNES-LVKDL-----------------------SNHDTFSS 286
+L M+ K W L ++ +V+ L N+D
Sbjct: 999 LDLWQVMESK--GWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIK 1056
Query: 287 LVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGL 323
++D D A L + Q +P S SY ++NGL
Sbjct: 1057 KLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGL 1093
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 14/214 (6%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 109
Y ++ CD A ++R M KGL P +Y+ +++ +C +M +A E EM
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM 243
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
+G P LLI+ L + L A+++ +M G P +T++ L+EA GE
Sbjct: 244 SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV 303
Query: 170 SKVFHLQDEVIQKGFLPYYVT---SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 226
+ YY + TY LI + + DEA +L E
Sbjct: 304 EFCIEM-----------YYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG 352
Query: 227 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
P Y+ +I G R AF +M K
Sbjct: 353 HKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYS 87
Y + ++ QM L + T +I + V++AV + + + G D Y+
Sbjct: 127 YESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYN 186
Query: 88 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 147
++ C K A + M+ KG+ PD Y +L+ C ++ EA++ EM R
Sbjct: 187 SLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRR 246
Query: 148 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 207
G +P R D L+E G + ++ + GF+ P + T+N LI +
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFV--------PDIQTFNILIEAIS 298
Query: 208 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
+ +E+ ++ L D +Y +I +I ++ +AF L
Sbjct: 299 KSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRL 344
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 7/178 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+N LI A ++ + + + +E+Y+ C L + TY+ +I +
Sbjct: 285 PDIQTFNILIEAISKSGE-----VEFC--IEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
++EA +L E G P Y+ II C+N A +M K P+ Y +
Sbjct: 338 IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTM 397
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
LI + + ++A + EM G+ P R +D + + G+ ++ +Q
Sbjct: 398 LITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQ 455
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 131/337 (38%), Gaps = 41/337 (12%)
Query: 116 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 175
P Y L + L ++ + ++M + G T ++E Y G + L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 176 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 235
+ V + ++ YN+L+H LC + A ++R M L PD+ +Y+
Sbjct: 169 FNGVPK-------TLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 236 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED 295
+++G+ ++++A E EM ++ P + +DL L+N E
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPP-------ARGRDL----LIEGLLNAGYLES 270
Query: 296 KAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYI---VAHCLTIPSY-- 350
EM K+ + ++PD ++ +L+ + K F + +Y + C+ I +Y
Sbjct: 271 AKEMVSKMT-KGGFVPDIQTFNILIEAISKSGEVEFCIEM--YYTACKLGLCVDIDTYKT 327
Query: 351 IIYDI-----------LIEKCANNEFKSVVEL----VKGFRMRGLVNEAARARDTMLHRN 395
+I + L+ C + K L +KG G+ ++A M +
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 396 YRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
+ P VY +LI GG A + EM G V
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLV 424
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 77 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 136
+G+ P +D +I C+ + + A + ++M+ KG P + L++ L E
Sbjct: 370 RGIKPFSD----VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDE 425
Query: 137 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 196
A+++ + M RG+ P TY ++ Y G + + E +K SP
Sbjct: 426 AKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH------KKLSP-- 477
Query: 197 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF-RRIRELRKAFELKL 255
VTY+ALI G C + DEAL++L M + P+ Y+ +I F + + KA L
Sbjct: 478 VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFE 537
Query: 256 EMDQK 260
EM QK
Sbjct: 538 EMKQK 542
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 124/307 (40%), Gaps = 50/307 (16%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 113
+I LF + + A + E G +P+A +Y + CK M A + +ML G
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 114 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC--------- 164
+ + G +I C + + EA +++ + S R TL+ A C
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA 356
Query: 165 ------LKGE--------FSKVFH----LQDEVIQKGFLPYYVTSF-SPSLVTYNALIHG 205
L GE FS V H +++ K L ++ +P +N ++H
Sbjct: 357 QEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHA 416
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
DEA E+L+ M L PD +Y+ +ISG+ + + +A E+ E +K
Sbjct: 417 CSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH---- 472
Query: 266 LDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL-----RYQAQYLPDSVSYCLLL 320
K LS T+ +L+ YC ++ + ALKL R+ Q P++ Y L+
Sbjct: 473 ----------KKLSPV-TYHALIRGYCKIEEYDEALKLLNEMDRFGVQ--PNADEYNKLI 519
Query: 321 NGLHKKA 327
KA
Sbjct: 520 QSFCLKA 526
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 14/209 (6%)
Query: 11 TLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGI 70
TLI+A C+ + ++ + +L + R + P + +I C V++A +
Sbjct: 341 TLITALCK--NDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKAL 394
Query: 71 LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH 130
L M KG +P ++ ++ K ++ +A E+ M +G+ PDV+ Y ++I
Sbjct: 395 LLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAK 454
Query: 131 QRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 190
+ EA+++ E + TY L+ YC E+ + L +E+ + G
Sbjct: 455 GGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFG------- 507
Query: 191 SFSPSLVTYNALIHGLCFFQRPDEALEIL 219
P+ YN LI C E E+L
Sbjct: 508 -VQPNADEYNKLIQSFCLKALDWEKAEVL 535
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D V YNTLI A EA K S E+Y +M + + TY MI ++ ++
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCAS-------EIYERMHTSGVPCSIQTYNTMISVYGRGLQL 825
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
++A+ I GL Y+ +I + K +M +AL + EM KGI P +Y ++
Sbjct: 826 DKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMM 885
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
+++ R E +L Q M G TY TL++ Y +F++ V +KG
Sbjct: 886 VKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
++++L+ +M + PNE TY ++ + + EEA+ M G P +YS +I
Sbjct: 276 KVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVI 335
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 144
S K + KA+ + +M +GI P + ++ L +A LF +M
Sbjct: 336 SLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Query: 9 YNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAV 68
YN ++ C+ + + + ++ +M R + N T+ +I C R EEA+
Sbjct: 283 YNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAM 342
Query: 69 GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG---IFPDVHAYGLLI 125
+ M E G P A++Y +I + +G+ EM +M G + YG L
Sbjct: 343 TLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFL- 401
Query: 126 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++LC RL A +F+ M G PG +TYD L+ C + ++ L E +KG
Sbjct: 402 KILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKG 459
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 78 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 137
GL +S + ++ + C+ A +M V+ IFPD + LLI C +L EA
Sbjct: 206 GLKRDKESLTLVVKKLCEKGHASIAEKM-VKNTANEIFPDENICDLLISGWCIAEKLDEA 264
Query: 138 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 197
L EM G G + Y+ +++ C F LQ EV +K L +
Sbjct: 265 TRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEV-EKVLLEMEFRGVPRNTE 323
Query: 198 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
T+N LI+ LC +R +EA+ + M E PD +Y +I
Sbjct: 324 TFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLI 364
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 10/209 (4%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
R+ L + +R P +Y M + ++ E +L M KG P Y +
Sbjct: 281 RVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKV 340
Query: 91 SRFCKNKEMGKALE-MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR-G 148
C+ ++ +A+ + EM+ P V Y +LI+ LC + +EA ++M +
Sbjct: 341 KALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVS 400
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
TY TLV+ C G+F + + +E++ + S P + TY+ +I GLC
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEML--------IKSHFPGVETYHMMIKGLCD 452
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAV 237
R EA+ L M + P+ + A+
Sbjct: 453 MDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIV--ELYHQMCVRELSPNETTYRCMIRLFCD 60
+P Y + A C A K V ++ E+ C+ P Y +I+ CD
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEA----VSVINKEMMQGHCL----PTVGVYNVLIKGLCD 381
Query: 61 RNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
+ EAVG L+ M+++ + ++Y ++ C++ + +A ++ EML K FP V
Sbjct: 382 DGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVE 441
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
Y ++I+ LC R EA +EM+ + M P + L E+ C
Sbjct: 442 TYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCF 487
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 167/415 (40%), Gaps = 51/415 (12%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM- 105
++ + +IR F R+E+A+ + + + E + S+ ++ K E+ A +
Sbjct: 80 KDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIF 139
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
+ + + A LL+++LC R A +FQEM +G P +Y L++ +CL
Sbjct: 140 RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCL 199
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
+G+ + HL + F +V Y L+ LC D+A+EIL +
Sbjct: 200 EGKLEEATHL----LYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRK 255
Query: 226 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD-LSNHDTF 284
L + Y + +G E + + E+L++ + D++
Sbjct: 256 GLKAPKRCYHHIEAGHWE--------------SSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 285 SSLVNDYCAEDK----AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYI 340
S++ D E K E+ L +R + + P Y + L + + A ++ +
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKG-FEPTPFIYGAKVKALCRAGKLKEAVSVINKEM 360
Query: 341 V-AHCLTIPSYIIYDILIE----------------------KCANNEFKSVVELVKGFRM 377
+ HCL P+ +Y++LI+ C NE ++ LV G
Sbjct: 361 MQGHCL--PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE-ETYQTLVDGLCR 417
Query: 378 RGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
G EA++ + ML +++ P Y+++I C ++A +EM+ V
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 126/312 (40%), Gaps = 39/312 (12%)
Query: 43 ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 102
E++ T ++++ C NR + A + + M +G P DSY ++ FC ++ +A
Sbjct: 147 EVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 103 LEMKVEML----DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 158
+ M KG D+ Y +L+ LC + +A ++ ++L +G+ R Y
Sbjct: 207 THLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 159 LVEAYCLKGE--FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEAL 216
+ + +V L E + +G + P L +Y+A+ L + E
Sbjct: 267 IEAGHWESSSEGIERVKRLLTETLIRGAI--------PCLDSYSAMATDLFEEGKLVEGE 318
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL---------- 266
E+L M +P Y A + R +L++A + + + C P
Sbjct: 319 EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG 378
Query: 267 ---DQDTNESL---------VKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLP 311
D + E++ V ++N +T+ +LV+ C + + A ++ + P
Sbjct: 379 LCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 312 DSVSYCLLLNGL 323
+Y +++ GL
Sbjct: 439 GVETYHMMIKGL 450
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 10/209 (4%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
R+ L + +R P +Y M + ++ E +L M KG P Y +
Sbjct: 281 RVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKV 340
Query: 91 SRFCKNKEMGKALE-MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR-G 148
C+ ++ +A+ + EM+ P V Y +LI+ LC + +EA ++M +
Sbjct: 341 KALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVS 400
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
TY TLV+ C G+F + + +E++ + S P + TY+ +I GLC
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEML--------IKSHFPGVETYHMMIKGLCD 452
Query: 209 FQRPDEALEILRGMPEMLLDPDEVSYSAV 237
R EA+ L M + P+ + A+
Sbjct: 453 MDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIV--ELYHQMCVRELSPNETTYRCMIRLFCD 60
+P Y + A C A K V ++ E+ C+ P Y +I+ CD
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEA----VSVINKEMMQGHCL----PTVGVYNVLIKGLCD 381
Query: 61 RNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 119
+ EAVG L+ M+++ + ++Y ++ C++ + +A ++ EML K FP V
Sbjct: 382 DGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVE 441
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
Y ++I+ LC R EA +EM+ + M P + L E+ C
Sbjct: 442 TYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCF 487
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 167/415 (40%), Gaps = 51/415 (12%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM- 105
++ + +IR F R+E+A+ + + + E + S+ ++ K E+ A +
Sbjct: 80 KDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIF 139
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
+ + + A LL+++LC R A +FQEM +G P +Y L++ +CL
Sbjct: 140 RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCL 199
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
+G+ + HL + F +V Y L+ LC D+A+EIL +
Sbjct: 200 EGKLEEATHL----LYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRK 255
Query: 226 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD-LSNHDTF 284
L + Y + +G E + + E+L++ + D++
Sbjct: 256 GLKAPKRCYHHIEAGHWE--------------SSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 285 SSLVNDYCAEDK----AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYI 340
S++ D E K E+ L +R + + P Y + L + + A ++ +
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKG-FEPTPFIYGAKVKALCRAGKLKEAVSVINKEM 360
Query: 341 V-AHCLTIPSYIIYDILIE----------------------KCANNEFKSVVELVKGFRM 377
+ HCL P+ +Y++LI+ C NE ++ LV G
Sbjct: 361 MQGHCL--PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE-ETYQTLVDGLCR 417
Query: 378 RGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 432
G EA++ + ML +++ P Y+++I C ++A +EM+ V
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 126/312 (40%), Gaps = 39/312 (12%)
Query: 43 ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 102
E++ T ++++ C NR + A + + M +G P DSY ++ FC ++ +A
Sbjct: 147 EVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 103 LEMKVEML----DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 158
+ M KG D+ Y +L+ LC + +A ++ ++L +G+ R Y
Sbjct: 207 THLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 159 LVEAYCLKGE--FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEAL 216
+ + +V L E + +G + P L +Y+A+ L + E
Sbjct: 267 IEAGHWESSSEGIERVKRLLTETLIRGAI--------PCLDSYSAMATDLFEEGKLVEGE 318
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL---------- 266
E+L M +P Y A + R +L++A + + + C P
Sbjct: 319 EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG 378
Query: 267 ---DQDTNESL---------VKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLP 311
D + E++ V ++N +T+ +LV+ C + + A ++ + P
Sbjct: 379 LCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 312 DSVSYCLLLNGL 323
+Y +++ GL
Sbjct: 439 GVETYHMMIKGL 450
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 28/236 (11%)
Query: 9 YNTLISAACEAEKNHNLSIPYVRIVELYHQMCVR---ELSPNETTYRCMIRLFCDRNR-- 63
YN++I +A K +R V ++ M E P TY + + R
Sbjct: 210 YNSIIFYFTKAGK-------LIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNS 262
Query: 64 ------VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM-LDKGIFP 116
+E + R M + G+ P + + ++ + + + AL + +M + P
Sbjct: 263 YINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEP 322
Query: 117 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 176
+ Y LI LC Q R + AR+L EM +G P G++Y++LV A+ L GE
Sbjct: 323 NSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCL 382
Query: 177 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE-MLLDPDE 231
E+I+ G V F ++Y L+ C + DEA +L + E L+D D
Sbjct: 383 WEMIENG----RVVDF----ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDS 430
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 43/257 (16%)
Query: 86 YSRIISRFCKNKEMGKALEMKVEMLDKGIF---PDVHAYGLLIQLLCHQRR--------L 134
Y+ II F K ++ +A+ + M+ P + Y +L + L + +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 135 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK---GEFSKVFHLQDEVIQKGFLPYYVTS 191
R LF++M+ G+ P + LV+ Y L + ++FH V
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMS----------VVYD 319
Query: 192 FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 251
P+ TY+ LIHGLC R A E+L M P+ SY+++++ AF
Sbjct: 320 CEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVN----------AF 369
Query: 252 ELKLEMDQKETC-WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL--RYQAQ 308
L E+D C W + + N +V +S + +LV++ C + K + A +L + +
Sbjct: 370 ALSGEIDDAVKCLWEMIE--NGRVVDFIS----YRTLVDESCRKGKYDEATRLLEMLREK 423
Query: 309 YLPDSVSYCLLLNGLHK 325
L D SY L+N LHK
Sbjct: 424 QLVDRDSYDKLVNVLHK 440
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 141/356 (39%), Gaps = 70/356 (19%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 88
Y + + ++ ++ ++P+ Y MI ++ EA +++ M E G+ P+ SYS
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 89 IISRFCKNKEMGKALEMKVEMLDKG----------------------------------- 113
++S + +N + +AL + EM +
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 114 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
I P+V +Y ++++ EA LF+ M + + TY+T+++ Y E K
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 174 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 233
+L E+ +G P+ +TY+ +I + D A + + + ++ D+V
Sbjct: 421 NLVQEMQSRG--------IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 234 YSAVISGFRRIRELRKA----FELKLEMD---------------QKETCWPLDQDTNESL 274
Y +I + R+ + A ELKL + +E W Q
Sbjct: 473 YQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGE 532
Query: 275 VKDLSNHDTFSSLVNDYCAEDK----AEMALKLRYQAQYLPDSVSYCLLLNGLHKK 326
VKD+S F ++N Y + E+ K+R A Y PDS ++LN K+
Sbjct: 533 VKDIS---VFGCMINLYSRNQRYVNVIEVFEKMR-TAGYFPDSNVIAMVLNAYGKQ 584
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 127/311 (40%), Gaps = 52/311 (16%)
Query: 4 PDCVTYNTLISAACEAEK--------------NHNLSIPYVRI-VELYHQM-CVRE---- 43
P+ V+Y+TL+S E K N L + I +++Y Q+ V+E
Sbjct: 293 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 44 --------LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
+ PN +Y ++R++ + EA+ + RLM K + + +Y+ +I + K
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 96 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 155
E KA + EM +GI P+ Y +I + +L A LFQ++ G+
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 156 YDTLVEAY---CLKGEFSKVFH---LQDEVIQKG-----------------FLPYYVTSF 192
Y T++ AY L G ++ H L D + ++ F + +
Sbjct: 473 YQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGE 532
Query: 193 SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 252
+ + +I+ QR +E+ M PD + V++ + + RE KA
Sbjct: 533 VKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADT 592
Query: 253 LKLEMDQKETC 263
+ EM Q+E C
Sbjct: 593 VYREM-QEEGC 602
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 40/287 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P YN ++ A++ I + L+ +M R L+P+ TY +I F
Sbjct: 153 PSVFAYNVVLRNVLRAKQ---FDIAH----GLFDEMRQRALAPDRYTYSTLITSFGKEGM 205
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIIS---RFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+ A+ L+ M + +S YS +I R C + KA+ + + GI PD+ A
Sbjct: 206 FDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC---DYSKAISIFSRLKRSGITPDLVA 262
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK---VFHLQD 177
Y +I + + EAR L +EM G+ P +Y TL+ Y +F + VF
Sbjct: 263 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 322
Query: 178 EV------------------------IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
EV + F P++V+YN ++ +
Sbjct: 323 EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFG 382
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
EA+ + R M ++ + V+Y+ +I + + E KA L EM +
Sbjct: 383 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 429
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 18/225 (8%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D +Y+ + C++ K P+ + V+LY +M R + + Y +IR V
Sbjct: 223 DLFSYSIYMDIMCKSGK------PW-KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGV 275
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
E + + R M E+G P+ +++ II C++ M A M EM +G PD Y L
Sbjct: 276 EFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL 335
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
L +L LF M+ G+ P TY L+ + G V ++ + + G
Sbjct: 336 FSRLEKPSEIL---SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG- 391
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 229
+P YNA+I L D A E M E L P
Sbjct: 392 -------DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P+ T+NT+I CE + + + +M R P+ TY C LF
Sbjct: 291 EPNVATHNTIIKLLCEDGRMRD-------AYRMLDEMPKRGCQPDSITYMC---LFSRLE 340
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+ E + + M G+ P D+Y ++ +F + + L + M + G PD AY
Sbjct: 341 KPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYN 400
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+I L + L AR+ +EM+ RG+SP R
Sbjct: 401 AVIDALIQKGMLDMAREYEEEMIERGLSPRRR 432
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 11/227 (4%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
E + +M ++ + +Y + + C + +AV + + M + + +Y+ +I
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
++ + + + EM ++G P+V + +I+LLC R+ +A + EM RG P
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
TY L + + S++ L +I+ G P + TY L+ +
Sbjct: 330 ITYMCL---FSRLEKPSEILSLFGRMIRSG--------VRPKMDTYVMLMRKFERWGFLQ 378
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
L + + M E PD +Y+AVI + L A E + EM ++
Sbjct: 379 PVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGIL--RLMAEKGLSPHADSYSRIISR-FCKNKEMGKAL 103
+ET++ ++ C+ V EA + + + G S +I R + K GK
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
E +M +G+ D+ +Y + + ++C + +A L++EM R M Y+T++ A
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 164 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 223
+ E+ ++G P++ T+N +I LC R +A +L MP
Sbjct: 270 GASQGVEFGIRVFREMRERG--------CEPNVATHNTIIKLLCEDGRMRDAYRMLDEMP 321
Query: 224 EMLLDPDEVSYSAVISGFRRIRELRKAF 251
+ PD ++Y + S + E+ F
Sbjct: 322 KRGCQPDSITYMCLFSRLEKPSEILSLF 349
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 49/251 (19%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGIL----RLMAEKGLSPHADSYSR 88
+++Y M + +++ + T+Y +++ C RV+ A I R+ + L A +Y
Sbjct: 320 LKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCT 379
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
II F K AL++K +M G+ P+ H + LI + + +A LF+EML G
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASG 439
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHL--------------QDEVIQKGFL--------- 185
P + ++ L+ A ++ + F L D+++ KG
Sbjct: 440 CEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNN 499
Query: 186 ------------PYYVTS----FSPSLVTYNALIH--GLCFFQRPDEALEILRGMPEMLL 227
PY S F P+ TYN L+ G +++ E++ M + L
Sbjct: 500 GPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYR----GKELMDEMKSLGL 555
Query: 228 DPDEVSYSAVI 238
P+++++S +I
Sbjct: 556 SPNQITWSTLI 566
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 13/179 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P TYN L+ A C + Y R EL +M LSPN+ T+ +I +
Sbjct: 524 PTTATYNILLKA-CGTD--------YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGD 574
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
VE AV ILR M G P +Y+ I +NK + A + EM I P+ Y
Sbjct: 575 VEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNT 634
Query: 124 LIQLLCHQRRLLEARD---LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
L++ LLE R ++Q+M G P L+E +C +G + QD++
Sbjct: 635 LLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWC-EGVIQENGQSQDKI 692
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/483 (20%), Positives = 175/483 (36%), Gaps = 60/483 (12%)
Query: 32 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 91
+ L+ +M + + P +TY +I ++ A+ L M++ G+ P + ++
Sbjct: 206 VQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQ 265
Query: 92 RFCKNKEMGKALEM------KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 145
+ K +E KA E D + + Y +I ++ EA + F+ ML
Sbjct: 266 MYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRML 325
Query: 146 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 205
G+ P T++T++ Y G+ +V L + +P TYN LI
Sbjct: 326 EEGIVPTTVTFNTMIHIYGNNGQLGEVTSL---------MKTMKLHCAPDTRTYNILISL 376
Query: 206 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 265
+ A + M + L PD VSY ++ F + +A L EMD
Sbjct: 377 HTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNV--E 434
Query: 266 LDQDTNESLVKDLSNHD----TFSSLVNDYCAEDKAEMALKLRYQA----QYLPDSVSYC 317
+D+ T +L + + ++S + A + + A YL ++
Sbjct: 435 IDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVF 494
Query: 318 LLLNGLHKKATSRFATRLLLFYIVAHCLT----IPSYIIYDILIEKCANNEFKSVV---- 369
+ ++K+ + + + I C S + Y + +KC N ++
Sbjct: 495 ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASAD 554
Query: 370 -------------------------ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYN 404
++ F G +N A M+ N P+ VY
Sbjct: 555 MPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYG 614
Query: 405 LLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERY-NEMSWVIRNTLR 463
+LI GNV +A + M G + +LIK LY Y +E + R L+
Sbjct: 615 VLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIK-LYTKVGYLDEAEAIYRKLLQ 673
Query: 464 SCN 466
SCN
Sbjct: 674 SCN 676
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 40/289 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLS---------------IPYVRIV-------------EL 35
PD TYNTL+ A+ H IPY ++ E+
Sbjct: 538 PDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 36 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 95
Y +M + P+ Y +I F D V++A+ + M E G+ ++ Y+ +I + K
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 96 NKEMGKALEMKVEML---DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
+ +A + ++L +K +PDV+ +I L + + +A +F M RG
Sbjct: 658 VGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EAN 716
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
T+ ++ Y G F + + ++ + L P ++YN+++ R
Sbjct: 717 EFTFAMMLCMYKKNGRFEEATQIAKQMREMKILT------DP--LSYNSVLGLFALDGRF 768
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 261
EA+E + M + PD+ ++ ++ + ++ +KA E+ +KE
Sbjct: 769 KEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKE 817
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 48/286 (16%)
Query: 7 VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEE 66
+ YN +I A + +S + EL+ M ++P++ TY ++++ + +
Sbjct: 506 IEYNVMIKA-------YGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 67 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 126
L M E G Y +IS F K ++ A E+ EM++ I PDV YG+LI
Sbjct: 559 GRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN 618
Query: 127 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD-EVIQKGFL 185
+ +A + M G+ Y++L++ Y +KV +L + E I + L
Sbjct: 619 AFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY------TKVGYLDEAEAIYRKLL 672
Query: 186 PYYVTSFSPSLVTYNALIH-------------------------------GLCFFQ---R 211
+ P + T N +I+ LC ++ R
Sbjct: 673 QSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGR 732
Query: 212 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 257
+EA +I + M EM + D +SY++V+ F ++A E EM
Sbjct: 733 FEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEM 778
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 105/506 (20%), Positives = 180/506 (35%), Gaps = 70/506 (13%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P VT+NT+I N L + L M + +P+ TY +I L N
Sbjct: 331 PTTVTFNTMIHIYG---NNGQLG----EVTSLMKTMKLH-CAPDTRTYNILISLHTKNND 382
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E A + M + GL P SY ++ F + +A + EM D + D +
Sbjct: 383 IERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSA 442
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRG-MSPGGRTYDTLVEAYCLKG---EFSKVFHLQDEV 179
L ++ L ++ F+ + G MS G Y ++AY +G E +VF EV
Sbjct: 443 LTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG--YSANIDAYGERGYLSEAERVFICCQEV 500
Query: 180 IQKGFLPYYVT-----------------------SFSPSLVTYNALIHGLCFFQRPDEAL 216
++ + Y V +P TYN L+ L P +
Sbjct: 501 NKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGR 560
Query: 217 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 276
L M E D + Y AVIS F ++ +L A E+ EM ++ + +V
Sbjct: 561 CYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM--------VEYNIEPDVV- 611
Query: 277 DLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLL 336
+ L+N + + A+ SY + S L+
Sbjct: 612 ------VYGVLINAFADTGNVQQAM-------------SYVEAMKEAGIPGNSVIYNSLI 652
Query: 337 LFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVE---LVKGFRMRGLVNEAARARDTMLH 393
Y L + IY L++ C ++ V ++ + R +V +A D+M
Sbjct: 653 KLYTKVGYLD-EAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ 711
Query: 394 RNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 453
R E + +++ + G +A + K+M + S +++ D R+ E
Sbjct: 712 RGEANE-FTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKE 770
Query: 454 MSWVIRNTLRSCNLNDSEQLKILDEI 479
+ + S D K L I
Sbjct: 771 AVETFKEMVSSGIQPDDSTFKSLGTI 796
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 3 DPDCVTYNTLISAAC------------EAEKNHNL---SIPYVRIVELYH---------- 37
+PD V Y LI+A EA K + S+ Y +++LY
Sbjct: 607 EPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEA 666
Query: 38 ------QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 91
Q C + P+ T CMI L+ +R+ V +A I M ++G + +++ ++
Sbjct: 667 IYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLC 725
Query: 92 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 151
+ KN +A ++ +M + I D +Y ++ L R EA + F+EM+ G+ P
Sbjct: 726 MYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQP 785
Query: 152 GGRTYDT----LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 197
T+ + L++ K K+ ++ + I++G L ++++ S SLV
Sbjct: 786 DDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRG-LELWISTLS-SLV 833
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
D D T+ LIS +A+K + + ++ +M + T Y MIR C
Sbjct: 221 DKDIRTWTILISVYGKAKK-------IGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAG 273
Query: 63 RVEEAVGILRLMAEKGLS-----------------------------------PHADSYS 87
R + A+ + M EKG++ D++
Sbjct: 274 RGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFG 333
Query: 88 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 147
++ FC + ++ +ALE+ E+ +K + D + +L++ LC R+++A ++ M R
Sbjct: 334 YLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRR 393
Query: 148 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 207
+ Y ++ Y + + SK Q EVI+K P P + TY ++ L
Sbjct: 394 KLDDSN-VYGIIISGYLRQNDVSKALE-QFEVIKKSGRP-------PRVSTYTEIMQHLF 444
Query: 208 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
++ ++ + M E ++PD V+ +AV++G + +A+++ M++K
Sbjct: 445 KLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEK 497
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 129/309 (41%), Gaps = 37/309 (11%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRN--RVEEAVGILRLMAEKGLSPHADSYSRII 90
+ + +M L P+ +T++C+I + C++ VEEA R M G P + +
Sbjct: 733 IRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYL 792
Query: 91 SRFCKNKEMGKALEMK--VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
C E+G + K ++ L K FP AY + I+ LC +L EA
Sbjct: 793 GCLC---EVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGER 849
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 208
TY ++V +G+ K + + + G P + Y +LI + F
Sbjct: 850 SLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIG--------TKPGVHVYTSLI--VYF 899
Query: 209 FQRP--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 266
F+ ++ LE + M +P V+Y+A+I G+ + ++ +A+ M+++ T
Sbjct: 900 FKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTS--- 956
Query: 267 DQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGL 323
+ T+S +N C K+E ALKL + P ++++ + GL
Sbjct: 957 ------------PDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Query: 324 HKKATSRFA 332
+++ A
Sbjct: 1005 NREGKHDLA 1013
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 16/244 (6%)
Query: 9 YNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAV 68
YNT++S A EA NL + + E+ C +++ T+ +I ++ ++ + +
Sbjct: 192 YNTMLSIAGEA---RNLDMVDELVSEMEKNGCDKDIR----TWTILISVYGKAKKIGKGL 244
Query: 69 GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 128
+ M + G A +Y+ +I C ALE EM++KGI + Y +L+ +
Sbjct: 245 LVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCI 304
Query: 129 CHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYY 188
++ + + +M+ + L++++C+ G+ + L E+ K
Sbjct: 305 AKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNK------ 358
Query: 189 VTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELR 248
+ L+ GLC R +ALEI+ M LD V Y +ISG+ R ++
Sbjct: 359 --EMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVS 415
Query: 249 KAFE 252
KA E
Sbjct: 416 KALE 419
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 180/450 (40%), Gaps = 66/450 (14%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+EL ++ +E+ + + +++ C NR+ +A+ I+ +M + L ++ Y IIS
Sbjct: 349 LELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISG 407
Query: 93 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
+ + ++ KALE + G P V Y ++Q L ++ + +LF EM+ G+ P
Sbjct: 408 YLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPD 467
Query: 153 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
+V + + ++ + + + +KG P+ +Y+ + LC R
Sbjct: 468 SVAITAVVAGHLGQNRVAEAWKVFSSMEEKG--------IKPTWKSYSIFVKELCRSSRY 519
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
DE ++I M + + +S VIS + E K +K E+ ++ + + N
Sbjct: 520 DEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIK-EIQKRSNSYC--DELNG 576
Query: 273 SLVKDLSNHDTFSSLVNDY-CAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLH------- 324
S + S + LV+DY C + + AL A D C +L+
Sbjct: 577 SGKAEFSQEE---ELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQE 633
Query: 325 --KKATSRFATRLLLFYIVAHC-------LTIPSYI-----------IYDILIEKCA-NN 363
+K+T +F L++ ++ H L S++ Y++ I+
Sbjct: 634 ALEKSTVQFTPELVV-EVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGK 692
Query: 364 EFKSVVELVKGFRMR-------------------GLVNEAARARDTMLHRNYRPEGAVYN 404
+FK + L R + GL N A R M P + +
Sbjct: 693 DFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFK 752
Query: 405 LLIFDHC--IGGNVHKAYDMYKEMLHYGFV 432
LI C G NV +A ++EM+ GFV
Sbjct: 753 CLITVLCEKKGRNVEEATRTFREMIRSGFV 782
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
+++E +M P+ TY MI + +VEEA R M E+G SP +YS+ I
Sbjct: 907 KVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFI 966
Query: 91 SRFCKNKEMGKALEMKVEMLDKGIFP 116
+ C+ + AL++ EMLDKGI P
Sbjct: 967 NCLCQACKSEDALKLLSEMLDKGIAP 992
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 74 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQ-- 131
M +G D+++ +I ++ + A+ EM D G+ P + LI +LC +
Sbjct: 704 MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKG 763
Query: 132 RRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTS 191
R + EA F+EM+ G P + C G D + + GF
Sbjct: 764 RNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF------- 816
Query: 192 FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 251
P V Y+ I LC + +EAL L D+ +Y +++ G + +L+KA
Sbjct: 817 --PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKAL 874
Query: 252 E 252
+
Sbjct: 875 D 875
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 15/235 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD TYN+LI C K + I ++ ++ V P+ +TYR +I+ C R
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALI-------VWDELKVSGHEPDNSTYRILIQGCCKSYR 339
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+++A+ I M G P Y+ ++ K +++ +A ++ +M+ +G+ Y +
Sbjct: 340 MDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNI 399
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
LI L R LF ++ +G T+ + C +G+ L +E+ +G
Sbjct: 400 LIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRG 459
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 238
FS LVT ++L+ G R D ++++ + E L P+ + ++A +
Sbjct: 460 --------FSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 15/242 (6%)
Query: 5 DCVTYNTLISA-ACEAEKNHNLSIPYVRIVELYHQMCV--RELSPNETTYRCMIRLFCDR 61
D +YN I C + + LS+ E+ + V P+ TY +I + C
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSL----FKEMKERSSVYGSSFGPDICTYNSLIHVLCLF 302
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+ ++A+ + + G P +Y +I CK+ M A+ + EM G PD Y
Sbjct: 303 GKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVY 362
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
L+ R++ EA LF++M+ G+ TY+ L++ G F L ++ +
Sbjct: 363 NCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKK 422
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 241
KG +V + + S+V LC + + A++++ M D V+ S+++ GF
Sbjct: 423 KG---QFVDAITFSIVGLQ-----LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGF 474
Query: 242 RR 243
+
Sbjct: 475 HK 476
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 90
++ E+++ M V +L+ TY M+ F + + A G+L M E + +Y+ II
Sbjct: 615 KLFEIFNGMGVTDLT--SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVII 672
Query: 91 SRFCKNKEMGKALEMKVEMLDK----GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 146
K MG+A ++ +LD+ G + D+ Y LI L RL EA LF M
Sbjct: 673 QGLGK---MGRA-DLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKS 728
Query: 147 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 190
G++P +Y+T++E G+ + + ++ G LP +VT
Sbjct: 729 NGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 106/261 (40%), Gaps = 32/261 (12%)
Query: 85 SYSRIISRFCKNKEMGKALEMKVEMLDKG------IFPDVHAYGLLIQLLCHQRRLLEAR 138
SY+ I F ++ AL + EM ++ PD+ Y LI +LC + +A
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 139 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 198
++ E+ + G P TY L++ C K + + D + G + Y F P +
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCC------KSYRMDDAMRIYGEMQY--NGFVPDTIV 361
Query: 199 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 258
YN L+ G ++ EA ++ M + + +Y+ +I G R F L ++
Sbjct: 362 YNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLK 421
Query: 259 QKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVS 315
+K + TFS + C E K E A+KL + + + D V+
Sbjct: 422 KK---------------GQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 316 YCLLLNGLHKKATSRFATRLL 336
LL G HK+ + +L+
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLM 487
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 7/184 (3%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD TY LI C++ + + + +Y +M P+ Y C++
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDD-------AMRIYGEMQYNGFVPDTIVYNCLLDGTLKAR 373
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+V EA + M ++G+ +Y+ +I +N + ++ KG F D +
Sbjct: 374 KVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFS 433
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++ LC + +L A L +EM RG S T +L+ + +G + L + +
Sbjct: 434 IVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREG 493
Query: 183 GFLP 186
+P
Sbjct: 494 NLVP 497
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 168/430 (39%), Gaps = 61/430 (14%)
Query: 78 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 137
G A +YS+I C+ +G+ ++ M + G+ D +L+ L + A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 138 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS-------KVFHLQDEVIQKGFLPYYVT 190
+ M G YD+++ A K E K+ D +
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 191 SFSPSLVTYNALIHGLCFFQRPD------EALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
S+ P V N L+ GL +R D E L+GM D SY+ I GF
Sbjct: 207 SYLPGTVAVNELLVGL---RRADMRSEFKRVFEKLKGMKRFKF--DTWSYNICIHGFGCW 261
Query: 245 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 304
+L A L EM ++ + + S D+ T++SL++ C KA+ AL +
Sbjct: 262 GDLDAALSLFKEMKERSSVY------GSSFGPDIC---TYNSLIHVLCLFGKAKDALIVW 312
Query: 305 YQ---AQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCA 361
+ + + PD+ +Y +L+ G K + R + ++ + + +P I+Y+ L++
Sbjct: 313 DELKVSGHEPDNSTYRILIQGCCK--SYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL 370
Query: 362 NNEFKSVVELVKGFRMRGLVNEAARAR-------DTMLHRNYRPEGA------------- 401
+ + V E + F +V E RA L RN R E
Sbjct: 371 --KARKVTEACQLFEK--MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 402 ----VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWV 457
++++ C G + A + +EM GF + ++ +L+ + R++ +
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKL 486
Query: 458 IRNTLRSCNL 467
+++ +R NL
Sbjct: 487 MKH-IREGNL 495
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 19/244 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD + +N LI A + Y LY Q+ P E TY +I+ +C
Sbjct: 175 PDVICFNLLIDA-------YGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 64 VEEAVGILRLMAEKGLSPHA---DSYSRIISRFCKNK-EMGKALEMKVEMLDKGIFPDVH 119
+E A +L M +SP Y+ I K K +A+++ M P
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
Y L+I L + + L+ EM P TY LV A+ +G K + +++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
+ G P + YNAL+ P A EI M M +PD SY+ ++
Sbjct: 348 QEDG--------LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 399
Query: 240 GFRR 243
+ R
Sbjct: 400 AYGR 403
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 40/284 (14%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P TYN +I+ +A K++ +LY +M + PN TY ++ F
Sbjct: 284 PTTETYNLMINLYGKASKSY-------MSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 336
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E+A I + E GL P Y+ ++ + + A E+ M G PD +Y +
Sbjct: 337 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ +A +F+EM G++P +++ L+ AY + +K + E+ + G
Sbjct: 397 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 456
Query: 184 FLP--YYVTSF-------------------------SPSLVTYNALIH---GLCFFQRPD 213
P + + S + + TYN LI+ F +R +
Sbjct: 457 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 516
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 257
E L+ E PD V++++ I + R + K E+ EM
Sbjct: 517 ELFVELK---EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 137/336 (40%), Gaps = 36/336 (10%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA--DSYSRIISRFCKNKEMGK 101
LSP I+ D ++V + +G L S HA D + + NK+
Sbjct: 107 LSPIAQKILSFIQKETDPDKVADVLGALP-------STHASWDDLINVSVQLRLNKKWDS 159
Query: 102 ALEMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 160
+ + +L K F PDV + LLI + + EA L+ ++L P TY L+
Sbjct: 160 IILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLI 219
Query: 161 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ-RPDEALEIL 219
+AYC+ G + EV+ ++V+ + + YNA I GL + +EA+++
Sbjct: 220 KAYCMAGLIERA-----EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 274
Query: 220 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS 279
+ M P +Y+ +I+ + + + +++L EM + C P
Sbjct: 275 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKP-------------- 319
Query: 280 NHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLL 336
N T+++LVN + E E A ++ Q Q PD Y L+ + A
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE-- 377
Query: 337 LFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELV 372
+F ++ H P Y+I+++ S E V
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 94/238 (39%), Gaps = 15/238 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD YN L+ + A PY E++ M P+ +Y M+ +
Sbjct: 353 EPDVYVYNALMESYSRA------GYPY-GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+A + M G++P S+ ++S + K +++ K + EM + G+ PD
Sbjct: 406 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 465
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++ L + + + EM + TY+ L+ Y G ++ L E+ +K
Sbjct: 466 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 525
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+F P +VT+ + I + + LE+ M + PD + ++S
Sbjct: 526 --------NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 19/244 (7%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD + +N LI A + Y LY Q+ P E TY +I+ +C
Sbjct: 153 PDVICFNLLIDA-------YGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 64 VEEAVGILRLMAEKGLSPHA---DSYSRIISRFCKNK-EMGKALEMKVEMLDKGIFPDVH 119
+E A +L M +SP Y+ I K K +A+++ M P
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 120 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
Y L+I L + + L+ EM P TY LV A+ +G K + +++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
+ G P + YNAL+ P A EI M M +PD SY+ ++
Sbjct: 326 QEDG--------LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 377
Query: 240 GFRR 243
+ R
Sbjct: 378 AYGR 381
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 40/284 (14%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P TYN +I+ +A K++ +LY +M + PN TY ++ F
Sbjct: 262 PTTETYNLMINLYGKASKSY-------MSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 314
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E+A I + E GL P Y+ ++ + + A E+ M G PD +Y +
Sbjct: 315 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ +A +F+EM G++P +++ L+ AY + +K + E+ + G
Sbjct: 375 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 434
Query: 184 FLP--YYVTSF-------------------------SPSLVTYNALIH---GLCFFQRPD 213
P + + S + + TYN LI+ F +R +
Sbjct: 435 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 494
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 257
E L+ E PD V++++ I + R + K E+ EM
Sbjct: 495 ELFVELK---EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 137/336 (40%), Gaps = 36/336 (10%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA--DSYSRIISRFCKNKEMGK 101
LSP I+ D ++V + +G L S HA D + + NK+
Sbjct: 85 LSPIAQKILSFIQKETDPDKVADVLGALP-------STHASWDDLINVSVQLRLNKKWDS 137
Query: 102 ALEMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 160
+ + +L K F PDV + LLI + + EA L+ ++L P TY L+
Sbjct: 138 IILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLI 197
Query: 161 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ-RPDEALEIL 219
+AYC+ G + EV+ ++V+ + + YNA I GL + +EA+++
Sbjct: 198 KAYCMAGLIERA-----EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 252
Query: 220 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS 279
+ M P +Y+ +I+ + + + +++L EM + C P
Sbjct: 253 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKP-------------- 297
Query: 280 NHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFATRLL 336
N T+++LVN + E E A ++ Q Q PD Y L+ + A
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE-- 355
Query: 337 LFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELV 372
+F ++ H P Y+I+++ S E V
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 7/191 (3%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD YN L+ + A PY E++ M P+ +Y M+ +
Sbjct: 331 EPDVYVYNALMESYSRA------GYPY-GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
+A + M G++P S+ ++S + K +++ K + EM + G+ PD
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 443
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++ L + + + EM + TY+ L+ Y G ++ L E+ +K
Sbjct: 444 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 503
Query: 183 GFLPYYVTSFS 193
F P VT S
Sbjct: 504 NFRPDVVTWTS 514
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 15/253 (5%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D TYN L+ N +PY + E+Y M + + +TY +I R+
Sbjct: 277 DTQTYNNLMMLFL------NKGLPY-KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRL 329
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+ A + + M E+ L P +S ++ K + ++++ +EM G P + L
Sbjct: 330 DAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSL 389
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 184
I +L A L+ EM G P Y ++E++ G+ + ++ + GF
Sbjct: 390 IDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF 449
Query: 185 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 244
LP +PS TY+ L+ + D A++I M L P SY ++++
Sbjct: 450 LP------TPS--TYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANK 501
Query: 245 RELRKAFELKLEM 257
R + A ++ LEM
Sbjct: 502 RLVDVAGKILLEM 514
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/465 (19%), Positives = 176/465 (37%), Gaps = 70/465 (15%)
Query: 8 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 67
T+NTLI +A + ++ + L+ +M + + T+ MI + EA
Sbjct: 307 TFNTLIDLYGKAGRLNDAA-------NLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEA 359
Query: 68 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 127
+L+ M EKG+SP +Y+ ++S ++ ALE ++ G+FPD + ++ +
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 128 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV------FHLQ----- 176
LC ++ + E + EM + + +++ Y +G + F L
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS 479
Query: 177 -------DEVIQKGFLPYYVTSF---------SPSLVTYNALIHGLCFFQRPDEALEILR 220
D +KG T F ++ YN +I + ++AL + +
Sbjct: 480 TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFK 539
Query: 221 GMPEMLLDPDEVSYSAV---ISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD 277
GM PDE +Y+++ ++G + E ++ L+ K C T +++
Sbjct: 540 GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC-----KTYAAMIAS 594
Query: 278 LSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLL 337
S V+ Y A +K + P+ V Y L+NG + A +
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVK----------PNEVVYGSLINGFAESGMVEEAIQY-- 642
Query: 338 FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYR 397
+ ++ E + + L+K + G + EA R D M
Sbjct: 643 ---------------FRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGG 687
Query: 398 PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI 442
P+ A N ++ G V +A ++ + G C + S ++
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMM 731
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 111/257 (43%), Gaps = 17/257 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PDC++Y+ LI + ++ VE++ + + P+ Y MI F
Sbjct: 288 PDCLSYSHLIEGLGRTGRIND-------SVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E++ R M ++ P+ ++YS+++S K +++ ALE+ EML +G+ P
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTS 400
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
++ LC A ++Q+ G Y L++ G+ + ++ DE+ + G
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG 460
Query: 184 FLPYYVTSFSPSLV-TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
+ PS V Y ++ GLC + A+ ++ P+ YS + S
Sbjct: 461 Y---------PSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLM 511
Query: 243 RIRELRKAFELKLEMDQ 259
+ A++L L++ +
Sbjct: 512 ASNKTELAYKLFLKIKK 528
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 107/276 (38%), Gaps = 32/276 (11%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 109
+Y MI + VEE +L+ M E G P SYS +I + + ++E+ +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
KG PD + Y +I R E+ ++ ML P TY LV +
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 170 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 229
S + +E++ +G LP + LVT + + LC + P A+ I + +
Sbjct: 377 SDALEIFEEMLSRGVLP------TTGLVT--SFLKPLCSYGPPHAAMVIYQKSRKAGCRI 428
Query: 230 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDL----------- 278
E +Y ++ R + + EM +E+ +P D + E +V L
Sbjct: 429 SESAYKLLLKRLSRFGKCGMLLNVWDEM--QESGYPSDVEVYEYIVDGLCIIGHLENAVL 486
Query: 279 -----------SNHDTFSSLVNDYCAEDKAEMALKL 303
N +S L + A +K E+A KL
Sbjct: 487 VMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKL 522
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 117/271 (43%), Gaps = 28/271 (10%)
Query: 36 YHQMCVRE--LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
+ VRE ++ + +Y ++R R + +L+ M +G++P + + + F
Sbjct: 137 FFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSF 196
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
+ + +A+E+ E G+ ++ L++ LC + + A+ +F +G P
Sbjct: 197 VRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK--KGNIPFD 254
Query: 154 R-TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 212
+Y+ ++ + GE ++ + E+++ G F P ++Y+ LI GL R
Sbjct: 255 SCSYNIMISGWSKLGEVEEMEKVLKEMVESG--------FGPDCLSYSHLIEGLGRTGRI 306
Query: 213 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 272
++++EI + PD Y+A+I F R+ ++ M +E C P
Sbjct: 307 NDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE-CEP------- 358
Query: 273 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 303
N +T+S LV+ K AL++
Sbjct: 359 -------NLETYSKLVSGLIKGRKVSDALEI 382
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD V+YNTLI A CE + S+P V L ++ + L P+ T+ ++ + +
Sbjct: 178 PDIVSYNTLIKALCEKD-----SLP--EAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ 230
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
E I M EK ++ +Y+ + + + + + E+ G+ PDV ++
Sbjct: 231 FELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNA 290
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I+ ++ ++ EA ++E++ G P T+ L+ A C G+F L E K
Sbjct: 291 MIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKR 350
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 220
+L T L+ L + +EA EI++
Sbjct: 351 YL--------VGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 22/239 (9%)
Query: 16 ACEAEK-NHNLSI---PYVRIVELYHQMCVRELSPNETTYRCM---------IRLFCDRN 62
ACE+E+ N+++ R+V V E+ + YR M I L+
Sbjct: 64 ACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAG 123
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAY 121
E A + M + S++ ++S + +K+ E+ E+ K I PD+ +Y
Sbjct: 124 MFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSY 183
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
LI+ LC + L EA L E+ +G+ P T++TL+ + LKG+F + ++++
Sbjct: 184 NTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE 243
Query: 182 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
K + + + TYNA + GL + E + + + L PD S++A+I G
Sbjct: 244 K--------NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
N+ A+ L M E G+ P Y+ +I + + E+ KA EM EM KG P+V Y
Sbjct: 703 NKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTY 762
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 181
+I+ LC EA L +EM RG +P Y TLV G+ S+ + E+++
Sbjct: 763 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVK 822
Query: 182 KGFLPYYVT 190
KG + V+
Sbjct: 823 KGHYVHLVS 831
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 135 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 194
L A M G+ P Y TL++ Y + GE K + E+ KG LP
Sbjct: 706 LAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLP-------- 757
Query: 195 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 254
++ TYN++I GLC EA +L+ M +P+ V YS ++ R+ +L +A ++
Sbjct: 758 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVI 817
Query: 255 LEMDQK 260
EM +K
Sbjct: 818 KEMVKK 823
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
DP + Y TLI + +S + E++ +M V+ PN TY MIR C
Sbjct: 721 DPSVLHYTTLIDG-------YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAG 773
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 113
EA +L+ M +G +P+ YS ++ K ++ +A ++ EM+ KG
Sbjct: 774 EFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/440 (19%), Positives = 176/440 (40%), Gaps = 50/440 (11%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
M + D + +N+++ A C+ K+ VEL +M +SP T+ +I +
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHE-------EAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+ + A+ +++ M G++ +++ +IS N +AL+M +M G+ P+
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
+ + + + ++ + G ++LV+ Y G+ + D V
Sbjct: 355 IMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK 414
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
K + T+N++I G C +A E+ M + L P+ ++++ +ISG
Sbjct: 415 NK------------DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 300
+ + + +A +L M++ K N T++ ++ Y K + A
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDG--------------KVQRNTATWNLIIAGYIQNGKKDEA 508
Query: 301 LKLRYQAQ---YLPDSVSYCLLL----NGLHKKATSRFATRLL-----LFYIVAHCLTIP 348
L+L + Q ++P+SV+ LL N L K +L + V + LT
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDT 568
Query: 349 SYIIYDILIEKCA--NNEFKSVV---ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 403
DI + E K ++ L+ G+ + G A + M + P
Sbjct: 569 YAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTL 628
Query: 404 NLLIFDHCIGGNVHKAYDMY 423
+ +I H + GNV + ++
Sbjct: 629 SSIILAHGLMGNVDEGKKVF 648
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 172/421 (40%), Gaps = 55/421 (13%)
Query: 47 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS--RFCKNKEMGKALE 104
N T+ MI + NR E + RLM + G+ P + +I+ C + E GK +
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 105 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 164
V L V L + C + L A F+ M R + +++++ AYC
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGE--LDFATKFFRRMRERDVI----AWNSVLLAYC 258
Query: 165 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 224
G+ + L E+ ++G SP LVT+N LI G + D A+++++ M
Sbjct: 259 QNGKHEEAVELVKEMEKEG--------ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET 310
Query: 225 MLLDPDEVSYSAVISG-------FRRIRELRKAFELKLE------MDQKETCWPLDQDTN 271
+ D +++A+ISG ++ + RK F + M C L
Sbjct: 311 FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQ 370
Query: 272 ESLVKDLSNHDTF-------SSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLH 324
S V ++ F +SLV+ Y K E A K+ + + D ++ ++ G
Sbjct: 371 GSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV-FDSVKNKDVYTWNSMITGYC 429
Query: 325 KKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNE 383
+ A LF + P+ I ++ +I N + ++L + RM
Sbjct: 430 QAGYCGKAYE--LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ--RME----- 480
Query: 384 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 443
+D + RN A +NL+I + G +A +++++M F+ + ++L+L+
Sbjct: 481 ----KDGKVQRNT----ATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 444 A 444
A
Sbjct: 533 A 533
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRI-----VELYHQMCVRELSPNETTYRCMIRLF 58
PD +TYN L+ C KN L V +L+ + ++ + PN TY MI F
Sbjct: 49 PDIMTYNILLDGLC---KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGF 105
Query: 59 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 118
C + EEA + R M E G P + +Y+ +I ++ + + E+ EM D
Sbjct: 106 CKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 165
Query: 119 HAYGLLIQLLCHQRRLLEARDLFQEML 145
YGL+ +L H RL + F EML
Sbjct: 166 STYGLVTDML-HDGRLDKG---FLEML 188
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+EL+ +M R L N TY +I+ + A I + M G+ P +Y+ ++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 93 FCKNKEMGKAL-EMKVE--------MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 143
CKN ++ KAL KVE + KG+ P+V Y +I C + EA LF++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 144 MLLRGMSPGGRTYDTLVEAYCLKGE 168
M G P TY+TL+ A+ G+
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGD 145
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 103 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 162
+E+ EM +G+ + Y LIQ L A+++F+EM+ G+ P TY+ L++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 163 YCLKGEFSKVFHLQDEVIQKG---FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 219
C G+ K L ++ G F + P++VTY +I G C +EA +
Sbjct: 61 LCKNGKLEKA--LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 220 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 257
R M E PD +Y+ +I R + + EL EM
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 16/258 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTYNTL+ A C KN Y + +EL ++ + + Y ++ + R
Sbjct: 199 PDVVTYNTLL-AGCIKVKN-----GYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGR 252
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
EEA ++ M +G SP+ YS +++ + + KA E+ EM G+ P+
Sbjct: 253 SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTT 312
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L+++ +R+L E+ G + Y L++ G+ + + D++ KG
Sbjct: 313 LLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG 372
Query: 184 FLP-YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 242
Y S +I LC +R EA E+ R D V + ++ +
Sbjct: 373 VRSDGYANSI---------MISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYC 423
Query: 243 RIRELRKAFELKLEMDQK 260
R E+ + +MD++
Sbjct: 424 RAGEMESVMRMMKKMDEQ 441
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 15/222 (6%)
Query: 46 PNETT----YRCMIRLFC--DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE- 98
P+E+T Y C L C +++ + + M GL P +Y+ +++ K K
Sbjct: 158 PDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNG 217
Query: 99 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 158
KA+E+ E+ GI D YG ++ + R EA + Q+M + G SP Y +
Sbjct: 218 YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSS 277
Query: 159 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 218
L+ +Y KG++ K L E+ G +P V + L Y I G F D + E+
Sbjct: 278 LLNSYSWKGDYKKADELMTEMKSIGLVPNKVM-MTTLLKVY---IKGGLF----DRSREL 329
Query: 219 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 260
L + +E+ Y ++ G + +L +A + +M K
Sbjct: 330 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 39/295 (13%)
Query: 88 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 147
R++++F K L++ V + + P+V Y L + + + +L+ ML
Sbjct: 806 RLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRD 865
Query: 148 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 207
+SP TY +LV+A F + LQ + + GF F + T LI
Sbjct: 866 SVSPSSYTYSSLVKASSFASRFGE--SLQAHIWKFGF------GFHVKIQT--TLIDFYS 915
Query: 208 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 267
R EA ++ MPE D+++++ ++S +RR+ ++ A L +M +K
Sbjct: 916 ATGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEK------- 964
Query: 268 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 327
N T + L+N Y E A L + + D +S+ ++ G +
Sbjct: 965 ------------NEATSNCLINGYMGLGNLEQAESL-FNQMPVKDIISWTTMIKGYSQ-- 1009
Query: 328 TSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVN 382
R+ + +FY + IP + +I CA+ V+E+ K M L N
Sbjct: 1010 NKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAH---LGVLEIGKEVHMYTLQN 1061
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 179/417 (42%), Gaps = 77/417 (18%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 93
EL+ ++ R+ N T+ M+ + ++ A + + M E+ + S++ +I +
Sbjct: 98 ELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGY 150
Query: 94 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 153
++ + KALE+ EM ++ I ++ +++ L + R+ EA +LF+ M R +
Sbjct: 151 AQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRRDVV--- 203
Query: 154 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 213
++ +V+ G+ + L D + ++ +++++NA+I G R D
Sbjct: 204 -SWTAMVDGLAKNGKVDEARRLFDCMPER------------NIISWNAMITGYAQNNRID 250
Query: 214 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 273
EA ++ + MPE D S++ +I+GF R RE+ KA L M +K
Sbjct: 251 EADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK------------- 293
Query: 274 LVKDLSNHDTFSSLVNDYCAEDKAEMAL----KLRYQAQYLPDSVSYCLLLNGLHKKATS 329
N ++++++ Y + E AL K+ P+ +Y +L+ A
Sbjct: 294 ------NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG- 346
Query: 330 RFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRM--RGLVNEAARA 387
+ +++ + + I+ L+ N + EL+ +M GLV +
Sbjct: 347 -LVEGQQIHQLISKSVHQKNEIVTSALL-----NMYSKSGELIAARKMFDNGLVCQ---- 396
Query: 388 RDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 444
RD + +N +I + G+ +A +MY +M +GF + L L+ A
Sbjct: 397 RDLI----------SWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFA 443
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Query: 30 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 89
++ +L+ ++ R L+P+ Y ++ V A+ +++ M EKG+ P + ++ +
Sbjct: 297 IKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 90 ISRFCKNKEMG--KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 147
K+KE G E +M ++ + P +L++L CH + DL++ ML +
Sbjct: 357 FIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEK 416
Query: 148 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
G P G + L A C + + F + +++G
Sbjct: 417 GYCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 108/247 (43%), Gaps = 17/247 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ +++ ++ C+ K + V++ ++ ++ +E + ++R FC
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDE--FNILLRAFCTERE 191
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV---EMLDKGIFPDVHA 120
++EA I + + +P + + ++ F KE G ++ EM+ +G P+
Sbjct: 192 MKEARSIFEKLHSR-FNPDVKTMNILLLGF---KEAGDVTATELFYHEMVKRGFKPNSVT 247
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
YG+ I C +R EA LF++M + TL+ + K L DE+
Sbjct: 248 YGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEIS 307
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
++G +P YNAL+ L A+++++ M E ++PD V++ ++ G
Sbjct: 308 KRGL--------TPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG 359
Query: 241 FRRIREL 247
+ +E
Sbjct: 360 MMKSKEF 366
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 109
TY M+ +F + R++ + LM EKG+ +Y+ +I + ++ A+ + EM
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 168
D G P V +Y +++L R+ EA ++++EML +SP TY L+E G+
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 10/172 (5%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
L +QM R + + +I CDR R E A E G+ +Y +I F
Sbjct: 370 LLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFL 429
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
++ E+ K +E+ EM+ + +LI L RR A D+F LL G
Sbjct: 430 RSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFD--LLPDDQKGVA 487
Query: 155 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 206
Y L++ Y G K + E+ ++ + PSL TY+ L+ GL
Sbjct: 488 AYTALMDVYISAGSPEKAMKILREMREREIM--------PSLGTYDVLLSGL 531
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D TY T++ EA + ++ ++H M + + + TY +I V
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSM-------YSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+ A+ + M + G P SY+ + + + +A E+ EML + P+ H Y +L
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 125 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
++ L + EA D+F +M G+ P + L+ GE S
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETS 279
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 184/451 (40%), Gaps = 86/451 (19%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
M + D V++N +I +N NL + EL+ M R++ ++ M+ +
Sbjct: 121 MPERDLVSWNVMIKGYV---RNRNLG----KARELFEIMPERDV----CSWNTMLSGYAQ 169
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
V++A + M EK + S++ ++S + +N +M +A + + + +
Sbjct: 170 NGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----S 221
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
+ L+ +++++EAR F M +R + +++T++ Y G+ + L DE
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVRDVV----SWNTIITGYAQSGKIDEARQLFDE-- 275
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
S + T+ A++ G + +EA E+ MPE +EVS++A+++G
Sbjct: 276 ----------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAG 321
Query: 241 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 300
+ + + A EL D V N T+++++ Y K A
Sbjct: 322 YVQGERMEMAKEL------------FD-------VMPCRNVSTWNTMITGYAQCGKISEA 362
Query: 301 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKC 360
L + D VS+ ++ G + S A RL F + + + + C
Sbjct: 363 KNL-FDKMPKRDPVSWAAMIAGYSQSGHSFEALRL--FVQMEREGGRLNRSSFSSALSTC 419
Query: 361 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 420
A+ VV L G ++ G ++ Y V N L+ +C G++ +A
Sbjct: 420 AD-----VVALELGKQLHG----------RLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 421 DMYKEM----------LHYGFVCHMFSVLAL 441
D++KEM + G+ H F +AL
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 131/326 (40%), Gaps = 49/326 (15%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNET--TYRCMIRLF 58
M D D +++NT+I YV + + + PN ++ M+ +
Sbjct: 307 MKDRDTISWNTMIDG-------------YVHVSRMEDAFALFSEMPNRDAHSWNMMVSGY 353
Query: 59 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 118
VE A R EK H S++ II+ + KNK+ +A+++ + M +G PD
Sbjct: 354 ASVGNVELA----RHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDP 409
Query: 119 HAYGLLIQLLCHQRRLLEARDLFQ--EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 176
H L LL L+ R Q +++++ + P ++ L+ Y GE + +
Sbjct: 410 HT---LTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIF 466
Query: 177 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 236
DE+ K ++T+NA+I G F EAL + M + P +++ +
Sbjct: 467 DEMKLK-----------REVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVS 515
Query: 237 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK 296
V++ + +A + M S+ K + +SSLVN + +
Sbjct: 516 VLNACAHAGLVDEAKAQFVSM--------------MSVYKIEPQMEHYSSLVNVTSGQGQ 561
Query: 297 AEMALKLRYQAQYLPDSVSYCLLLNG 322
E A+ + + PD + LL+
Sbjct: 562 FEEAMYIITSMPFEPDKTVWGALLDA 587
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 188/432 (43%), Gaps = 60/432 (13%)
Query: 81 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKG-IFPDVHAYGLLIQLLCHQRRLLEARD 139
P A ++ ++ + ++ E ++ + VEM+ KG +FPD ++ +I+ + + R L
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 140 LFQEMLLRGMSPGGRTYDTLVEAY--CLKGEFS-KVFHLQDEVIQKGFLPYYVTSFSPSL 196
+ + L G+ TL+ Y C EF+ KVF DE+ Q P+L
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVF---DEMHQ------------PNL 172
Query: 197 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 256
V +NA+I CF R ++ + R + + +L + S++ +++G+ + EL A + E
Sbjct: 173 VAWNAVITA-CF--RGND-VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSE 228
Query: 257 MDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKA-----EMALKLRYQAQYLP 311
M + D + +++ ++++ +F+ + +A E++L A
Sbjct: 229 MPHR------DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQS 282
Query: 312 DSVSYCLLLNGLHKKATSRFATRL--LLFYIVAHCLTIP-SYIIYDILIEK-CANNEFKS 367
S + +L+G +KA + + L + + C +P + ++++ + EK C S
Sbjct: 283 GSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC----IVS 338
Query: 368 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 427
++ G M G EA R + M P+G + L+ G + + D + EM
Sbjct: 339 WTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMK 398
Query: 428 ----------HYGFVCHMFSVLALIKALY---CDERYNEMSWVIRNTLRSC----NLNDS 470
HYG + ++ ++ Y C + V R L +C N+ +
Sbjct: 399 RVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELA 458
Query: 471 EQLKI-LDEIDP 481
EQ+K L+E+DP
Sbjct: 459 EQVKQRLNELDP 470
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 39 MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 98
MC + + PN +R +IRL E A +L + L P++ ++ I++ + + K
Sbjct: 434 MCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKN 493
Query: 99 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 158
+ AL + +M + G+ PD +G LI C Q + ++EM G+ R Y +
Sbjct: 494 VSSALMVVKQMKEAGVKPDSITFGYLIN-NCTQEDAITK--YYEEMKQAGVQATKRIYMS 550
Query: 159 LVEAYCLKGEFSKV 172
L++AY G+F K
Sbjct: 551 LIDAYAASGKFEKA 564
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 16/228 (7%)
Query: 5 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 64
D VT++TLI + + +S Y + +Y +M + PN Y +I R
Sbjct: 279 DAVTFSTLI-------RIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRP 331
Query: 65 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 124
+A I + + G +P+ +Y+ ++ + + + AL + EM +KG+ V Y L
Sbjct: 332 WQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTL 391
Query: 125 IQLLCHQRRLLEARDLFQEML-LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+ + R + EA ++FQ+M P T+ +L+ Y G S+ +
Sbjct: 392 LSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA--------EAA 443
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 231
L F P+L ++I ++ D+ + + E+ + PD+
Sbjct: 444 LLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 111/291 (38%), Gaps = 44/291 (15%)
Query: 51 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 110
Y +++F +E++ + M E+G+ P +++ IIS +N +A+E +M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 111 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 170
G PD +I + A L+ T+ TL+ Y + G +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 171 KVFHLQDEVIQKGFLPYYV---------------------------TSFSPSLVTYNALI 203
++ +E+ G P V F+P+ TY AL+
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 204 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 263
+ D+AL I R M E L + Y+ ++S R + +AFE+ +M ETC
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC 417
Query: 264 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLP 311
P + TFSSL+ Y + AE AL +A + P
Sbjct: 418 DP--------------DSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 162/419 (38%), Gaps = 56/419 (13%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 105
PN + M R + A+ + M GL P++ ++ ++ K+K + ++
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 106 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 165
+L G D++ + LI + RL +A +F + R + +Y L++ Y
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV----SYTALIKGYAS 212
Query: 166 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 225
+G L DE+ K +V++NA+I G EALE+ + M +
Sbjct: 213 RGYIENAQKLFDEIPVK------------DVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 226 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 285
+ PDE + V+S A +E+ ++ W D SN +
Sbjct: 261 NVRPDESTMVTVVSAC--------AQSGSIELGRQVHLWIDDHGFG-------SNLKIVN 305
Query: 286 SLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNG-----LHKKA------------T 328
+L++ Y + E A L + Y D +S+ L+ G L+K+A T
Sbjct: 306 ALIDLYSKCGELETACGLFERLPY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 329 SRFATRLLLFYIVAHCLTIPSYIIYDILIE---KCANNEFKSVVELVKGFRMRGLVNEAA 385
T L + AH I + I+ K N L+ + G + A
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 424
Query: 386 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 444
+ +++LH++ + +N +IF + G ++D++ M G + + L+ A
Sbjct: 425 QVFNSILHKSL----SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 18/258 (6%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P T N L+ ++ L + E+ + C + E+T+ +I C
Sbjct: 141 PSAYTLNALLLVLVRKRQSLEL------VPEILVKACRMGVRLEESTFGILIDALCRIGE 194
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM--KVEMLDKGIF-PDVHA 120
V+ A ++R M++ + YSR++S CK+K+ ++ +E L K F P +
Sbjct: 195 VDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKD-SSCFDVIGYLEDLRKTRFSPGLRD 253
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y ++++ L R E + +M + P Y +++ ++ K L DE++
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELL 313
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+P + TYN I+GLC + AL+++ M ++ +P+ V+Y+ +I
Sbjct: 314 L--------LGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKA 365
Query: 241 FRRIRELRKAFELKLEMD 258
+ +L +A L EM+
Sbjct: 366 LVKAGDLSRAKTLWKEME 383
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 139/333 (41%), Gaps = 43/333 (12%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+P Y +I ++ + N+S LYH + E+ +R +I +
Sbjct: 69 EPTPQAYRFVIKTLAKSSQLENISSV------LYHLEVSEKFDTPESIFRDVIAAYGFSG 122
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK----GIFPDV 118
R+EEA+ + + P A + + ++ + ++ +LE+ E+L K G+ +
Sbjct: 123 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQ---SLELVPEILVKACRMGVRLEE 179
Query: 119 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE---FSKVFHL 175
+G+LI LC + A +L + M + R Y L+ + C + F + +L
Sbjct: 180 STFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYL 239
Query: 176 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 235
+D ++K T FSP L Y ++ L R E + +L M ++PD V Y+
Sbjct: 240 ED--LRK-------TRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYT 290
Query: 236 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED 295
V+ G + KA +L D+ L D+ ++ + +N C ++
Sbjct: 291 IVLQGVIADEDYPKADKL------------FDELLLLGLAPDVYTYNVY---INGLCKQN 335
Query: 296 KAEMALKLRYQAQYL---PDSVSYCLLLNGLHK 325
E ALK+ L P+ V+Y +L+ L K
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
SP Y ++R + R +E V +L M + P Y+ ++ +++ KA
Sbjct: 247 FSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKAD 306
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 163
++ E+L G+ PDV+ Y + I LC Q + A + M G P TY+ L++A
Sbjct: 307 KLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKAL 366
Query: 164 CLKGEFSKVFHLQDEVIQKG 183
G+ S+ L E+ G
Sbjct: 367 VKAGDLSRAKTLWKEMETNG 386
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 32 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 91
+V + +QM + P+ Y +++ +A + + GL+P +Y+ I+
Sbjct: 270 VVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYIN 329
Query: 92 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 151
CK ++ AL+M M G P+V Y +LI+ L L A+ L++EM G++
Sbjct: 330 GLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNR 389
Query: 152 GGRTYDTLVEAY-------CLKGEFSKVFHLQ 176
T+D ++ AY C G + F++
Sbjct: 390 NSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 108 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 167
+M+D GI PDV A L++ R + R+L EM +G P G++Y++LV A+ L G
Sbjct: 238 QMVDSGIEPDVFALNCLVK-----GRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSG 292
Query: 168 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA---LEILRGMPE 224
E E+I+ G V F ++Y L+ C + DEA LE+LR
Sbjct: 293 EIDDAVKCLWEMIENG----RVVDF----ISYRTLVDESCRKGKYDEATRLLEMLREKQL 344
Query: 225 MLLDPDE 231
+ +D D+
Sbjct: 345 VDIDSDD 351
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 108 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 167
+M+D GI PDV A L++ R + R+L EM +G P G++Y++LV A+ L G
Sbjct: 213 QMVDSGIEPDVFALNCLVK-----GRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSG 267
Query: 168 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA---LEILRGMPE 224
E E+I+ G V F ++Y L+ C + DEA LE+LR
Sbjct: 268 EIDDAVKCLWEMIENG----RVVDF----ISYRTLVDESCRKGKYDEATRLLEMLREKQL 319
Query: 225 MLLDPDE 231
+ +D D+
Sbjct: 320 VDIDSDD 326
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 8/184 (4%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD VTY TLISA + E+ V L++ M ++ PN TT+ I+ +R R
Sbjct: 210 PDVVTYTTLISALYKHER-------CVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRR 262
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+A +L LM + + P + +Y+ +I F + A + M KG P++ Y
Sbjct: 263 AWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQT 322
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
+I LC A + ++ + + P T + L++ KG+ + + E++ +
Sbjct: 323 MIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRR 381
Query: 184 FLPY 187
P+
Sbjct: 382 VPPF 385
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 15/217 (6%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
D D V++N I + CE L Y+ + E+ L+P+ TY +I
Sbjct: 174 DIDAVSFNIAIKSFCELGI---LDGAYMAMREMEKS----GLTPDVVTYTTLISALYKHE 226
Query: 63 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 122
R G+ LM KG P+ +++ I + A ++ + M + PD Y
Sbjct: 227 RCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYN 286
Query: 123 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 182
++I+ R A ++ M +G P + Y T++ C G F + + + ++K
Sbjct: 287 MVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRK 346
Query: 183 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 219
+ P+L T L+ GL + D+A I+
Sbjct: 347 --------KWYPNLDTVEMLLKGLVKKGQLDQAKSIM 375
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 41/289 (14%)
Query: 58 FCDRNRVEEAVGILRLMAEKGLSPHA---DSYSRIISRFCKNKEMGKALEMKVEMLDKGI 114
FC + E ++ R + E P +S +R SRF E+ + VE+L+ GI
Sbjct: 69 FCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEV---FSLFVEILEDGI 125
Query: 115 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 174
PD + + L++ + L E R L + G+ TL+ Y +
Sbjct: 126 LPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARC 185
Query: 175 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 234
+ D +++ P +V YNA+I G RP+EAL + R M L P+E++
Sbjct: 186 VFDRIVE------------PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITL 233
Query: 235 SAVISG---------------FRRIRELRKAFELKLEM-DQKETCWPLDQDTNESLVKDL 278
+V+S + + K ++ + D C LD S+ + +
Sbjct: 234 LSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV--SIFEKM 291
Query: 279 SNHDT--FSSLVNDYCAEDKAEMALKL--RYQAQYL-PDSVSYCLLLNG 322
DT +S+++ Y KAE ++ + R +++ + PD +++ LLN
Sbjct: 292 RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%)
Query: 50 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 109
+Y+ +I F +VEEA ++ +M +K L + Y+ I++ + + + K +E+ EM
Sbjct: 283 SYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEM 342
Query: 110 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
+G+ P+ Y +L+ LC ++ EA E+ + Y TL E G
Sbjct: 343 SSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMI 402
Query: 170 SKVFHLQDEVIQKGFLP 186
K + E+I+ GF+P
Sbjct: 403 DKSLEVVAEMIRDGFIP 419
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 31 RIVELYHQM-CVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 89
R EL +M V+ + N T++ MI R EE +L+LM ++ + DSY +
Sbjct: 228 RARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVL 287
Query: 90 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 149
I F ++ +A + + M DK + + + Y L++ + + +L+ EM RG+
Sbjct: 288 IDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGV 347
Query: 150 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
+P TY L+ C G+ + +E+
Sbjct: 348 TPNKDTYWVLMNGLCKAGKVCEAMSFLNEL 377
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 103/258 (39%), Gaps = 47/258 (18%)
Query: 30 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 89
VR+ E Q PNE +Y +I N+V EAV + RLM EKG+ + S I
Sbjct: 194 VRVFESLSQ-------PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNI 246
Query: 90 IS-----RFCKN------KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 138
+S C + E+GK ++ L G D+H L+++ + + A
Sbjct: 247 LSISAPREGCDSLSEIYGNELGK--QIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAE 304
Query: 139 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS----- 193
+F EM + +++ ++ + + K + GF P VT S
Sbjct: 305 LIFAEMPEVNVV----SWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC 360
Query: 194 ------------------PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 235
PS+ +NA++ G ++ +EA+ R M L PD+ + S
Sbjct: 361 FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLS 420
Query: 236 AVISGFRRIRELRKAFEL 253
++S R+R L ++
Sbjct: 421 VILSSCARLRFLEGGKQI 438
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/472 (20%), Positives = 189/472 (40%), Gaps = 62/472 (13%)
Query: 34 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILR-LMAEKGLSPHADSYSRIISR 92
+L Q P T +I R E++ + + + + P+ SY++II+
Sbjct: 166 KLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINA 225
Query: 93 FCKNKEMGKALEMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 151
C + +ALE+ +L F P Y L + L R+ +A L +EML +G +
Sbjct: 226 HCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAA 285
Query: 152 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC---F 208
Y+ L+ Y G+F K DE+ K Y+ +++ +
Sbjct: 286 DSTVYNNLIRGYLDLGDFDKAVEFFDELKSK-------------CTVYDGIVNATFMEYW 332
Query: 209 FQRPD--EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM---DQKETC 263
F++ + EA+E R + + + + ++ F + + +A+ L EM
Sbjct: 333 FEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNI 392
Query: 264 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLL--- 320
++ DT +V + FS +N + ++ K+ + ++ D + YC ++
Sbjct: 393 LSVNSDTVGIMVNECFKMGEFSEAINTF-----KKVGSKVTSKP-FVMDYLGYCNIVTRF 446
Query: 321 --NGLHKKATSRFA---TRLLLFYIVAHCLTIPSYI--------------IYDILIEKCA 361
G+ +A FA +R L +H I +Y+ + D+ + A
Sbjct: 447 CEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVA 506
Query: 362 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 421
+ + EL+K G + E+A M R +P+ ++Y++++ C G + +A D
Sbjct: 507 DFGARVFGELIK----NGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKD 562
Query: 422 MYKEMLHYGF----VCHMFSVLALIKALYCDE---RYNEMSWVIRNTLRSCN 466
+ EM+ + V F + KA +E N ++ +RN +S N
Sbjct: 563 IVGEMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNSVARPVRNAGQSGN 614
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 115/292 (39%), Gaps = 72/292 (24%)
Query: 31 RIVELYHQMCVRELS----PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 86
++VEL+ + + LS + + Y + R EA+ +L M +KG+ ++ Y
Sbjct: 227 KVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELY 286
Query: 87 SRIISRFCKNKEM-----------GKALEMKVEMLDKGIFPDVHAYGL------------ 123
S +I F + +E+ GK L EM K + V +
Sbjct: 287 SMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRK 346
Query: 124 ------------LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 171
++ QR EA +++ + G TY + AYC +++K
Sbjct: 347 AELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNK 406
Query: 172 VFHLQDEVIQKGFLPYYVTSFS----------------------------PSLVTYNALI 203
L DE+++KGF V ++S P++ YN+LI
Sbjct: 407 AEMLFDEMVKKGF-DKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLI 465
Query: 204 --HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 253
HG R E +I + M + PD+VSY+++IS + R +EL + EL
Sbjct: 466 DMHGRAMDLRRAE--KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVEL 515
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 26/236 (11%)
Query: 29 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 88
+ V++Y E + TY I +C + +A + M +KG +YS
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 89 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 148
I+ + K + + A+ + +M +G P++ Y LI + L A +++EM
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 149 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV------IQKGFLPYYVTSFSPSLVTYNAL 202
+ P +Y +++ AY E + L E I + V FS +
Sbjct: 489 VLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKT------- 541
Query: 203 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR------RIRELRKAFE 252
R DE + +L+ M D YS+ ++ R +IR L+++F+
Sbjct: 542 -------SRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFD 590
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
+PD +YNTLI C + V L ++ + L P+ T+ ++ +
Sbjct: 174 EPDVASYNTLIKGLCGKGS-------FTEAVALIDEIENKGLKPDHITFNILLHESYTKG 226
Query: 63 RVEEAVGILRLMAEKGLSPHADSY-SRIISRFCKNKEMGKALEMKVEMLDK----GIFPD 117
+ EE I M EK + SY +R++ +NK E V + DK + PD
Sbjct: 227 KFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKS-----EEMVSLFDKLKGNELKPD 281
Query: 118 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 177
V + +I+ + +L EA ++E+ G P +++L+ A C G+ + L
Sbjct: 282 VFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCK 341
Query: 178 EVIQKGFL 185
E+ K L
Sbjct: 342 EIFAKRLL 349
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 25/243 (10%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
P+ V NTLI++ +A K + Y + L H+ P+E T+ ++ NR
Sbjct: 317 PNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHK-------PDEYTWNALLTALYKANR 369
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMG---KALEMKVEMLDKGIFPDVHA 120
E+ + + ++ + L + C+ ++G KA+++ EM G+ +
Sbjct: 370 YEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQ--KLGYWEKAVKLLYEMEGSGLTVSTSS 427
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
Y L+I R+ A +++ M R P TY +LV + C+ G L DEV
Sbjct: 428 YNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGS------LWDEVE 480
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
+ P + YNA IHG+C + A E+ M EM L+PD + + ++
Sbjct: 481 D------ILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQN 534
Query: 241 FRR 243
++
Sbjct: 535 LKK 537
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 45/239 (18%)
Query: 9 YNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAV 68
YN L+S E + R+V ++M R+ N Y +IR++ D ++A+
Sbjct: 56 YNALVSRYLRKEVSW-------RVV---NEMKKRKFRLNSFVYGKIIRIYRDNGMWKKAL 105
Query: 69 GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 128
GI+ + E GL + Y+ +I F K E+ + L+ G F D+ G L+ L
Sbjct: 106 GIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQF-------GSFEDI---GELVGKL 155
Query: 129 CHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYY 188
Q G++P + TL AY +G + + + +G
Sbjct: 156 KSQ----------------GVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEG----- 194
Query: 189 VTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE-MLLDPDEVSYSAVISGFRRIRE 246
P+L+ N LI+ + EAL I + E + + PD V+YS ++ F R ++
Sbjct: 195 ---IEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKK 250
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 49 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 108
+ MI + + ++ +EA+ +++ M G+ P +++ +IS F + K E+
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILEL 243
Query: 109 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE-----AY 163
M G PDV ++ +I L H + +A D F++ML G+ P T TL+ AY
Sbjct: 244 MCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAY 303
Query: 164 CLKGE----FSKVFHLQDEVIQK----------GFLPYYVTSF----SPSLVTYNALI-- 203
G+ +S V L+D + GF+ + F + VT+N++I
Sbjct: 304 MKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFC 363
Query: 204 ---HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 240
HGL D+A+E+ M D ++++A+++
Sbjct: 364 YANHGLA-----DKAVELFDQMEATGEKLDHLTFTAILTA 398
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 145/370 (39%), Gaps = 68/370 (18%)
Query: 81 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 140
P+ + +I +N + +A + EM G+F D Y L++ Q L + +
Sbjct: 80 PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 141 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFS-----KVFHLQDEVIQKGFLPYYVTSFSPS 195
+ G+S + L++ Y G K+F E
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE---------------RD 184
Query: 196 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 255
V++N+++ GL +A + MP+ D +S++ ++ G+ R RE+ KAFEL
Sbjct: 185 TVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFE 240
Query: 256 EMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLP--DS 313
+M ++ T ++S++V Y EMA ++ + LP +
Sbjct: 241 KMPERNTV-------------------SWSTMVMGYSKAGDMEMA-RVMFDKMPLPAKNV 280
Query: 314 VSYCLLLNGLHKKATSRFATRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVK 373
V++ +++ G +K + A RL+ D ++ + +V+ ++
Sbjct: 281 VTWTIIIAGYAEKGLLKEADRLV-----------------DQMVASGLKFDAAAVISILA 323
Query: 374 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY-----KEMLH 428
GL++ R + N V N L+ + GN+ KA+D++ K+++
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS 383
Query: 429 YGFVCHMFSV 438
+ + H V
Sbjct: 384 WNTMLHGLGV 393
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 176/459 (38%), Gaps = 81/459 (17%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
++ + VR + N ++ + +++E+AV +L E+ + ++ ++S F
Sbjct: 246 IHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFL----WTSVVSGFV 301
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+N +A+ +EM G+ P+ Y ++ L R L + + + + G
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 155 TYDTLVEAY--CLKGEF--SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 210
+ LV+ Y C E S+VF SP++V++ LI GL
Sbjct: 362 VGNALVDMYMKCSASEVEASRVFGAM---------------VSPNVVSWTTLILGLVDHG 406
Query: 211 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL---------EM---- 257
+ +L M + ++P+ V+ S V+ ++R +R+ E+ EM
Sbjct: 407 FVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGN 466
Query: 258 ---DQKETCWPLDQDTNESLVKDLSNHD--TFSSLVNDYCAEDKAEMALK---------L 303
D + +D N +++ + D T++SLV + K EMAL +
Sbjct: 467 SLVDAYASSRKVDYAWN--VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGI 524
Query: 304 RYQAQYLPDSVSYCLLLNGLH----------KKATSRFATRL-LLFYIVAHCLTIPSYII 352
R LP +S L L K S A+ L L + + C ++
Sbjct: 525 RMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED--- 581
Query: 353 YDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCI 412
+ E+ A + S LV G G ++ A A + M + P+ + L++ C
Sbjct: 582 AKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTF-LILLSACS 640
Query: 413 GGNV-----------HKAYDMYKEMLHYGFVCHMFSVLA 440
G + K Y++ ++ HY H+ +L
Sbjct: 641 NGRLTDLGLEYFQVMKKIYNIEPQVEHY---VHLVGILG 676
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 70 ILRLM-AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 128
+ R M ++ P YS++IS K + A+ + EM + G PD Y LI
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH 178
Query: 129 CHQRRLLEARDLFQEML--LRGM---SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
H R +A + + L ++G+ P TY+ L+ A+ G+ +V L
Sbjct: 179 LHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNAL-------- 230
Query: 184 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 243
F ++ SP + T+N ++ E +L M PD ++++ +I + +
Sbjct: 231 FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 244 IRELRKAFELKLEMDQKETCWPLDQDTNESLV--KDLSNHDTFSSLVNDYCAE---DKAE 298
+E K M+Q T +SL+ K+ TF+S++ +Y DKAE
Sbjct: 291 KQEFEK-------MEQ----------TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Query: 299 MALKLRYQAQYLPDSVSY-CLLL 320
K Y+P ++Y C+++
Sbjct: 334 WVFKKMNDMNYIPSFITYECMIM 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 26 SIPYVRIVELYHQMCV-RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 84
S +++ +E++ M R P+ Y +I + + + A+ + M G P A
Sbjct: 110 SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDAS 169
Query: 85 SYSRIISRFCKNKEMGKALEMKVEMLD--KGI---FPDVHAYGLLIQLLCHQRRLLEARD 139
Y+ +I+ ++ KALE LD KGI P+V Y +L++ ++ +
Sbjct: 170 VYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNA 229
Query: 140 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 199
LF+++ + +SP T++ +++AY G ++ + V+ + P ++T+
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEM----EAVLTR----MRSNECKPDIITF 281
Query: 200 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 250
N LI Q ++ + + + P +++++I + + R + KA
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 113/266 (42%), Gaps = 22/266 (8%)
Query: 2 TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 61
+ D + +NTL++A E+ LS +R L++ M + + PN T+ +I
Sbjct: 437 VEKDLILWNTLLAAYAES----GLSGEALR---LFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 62 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 121
+V+EA + M G+ P+ S++ +++ +N +A+ +M + G+ P+ +
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 122 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG--RTYDTLVEAYCLKGEFSKVFHLQDEV 179
+ + H L R + ++R + +LV+ Y G+ +K +
Sbjct: 550 TVALSACAHLASLHIGRTI-HGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV---- 604
Query: 180 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 239
+ + L NA+I + EA+ + R + + L PD ++ + V+S
Sbjct: 605 --------FGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLS 656
Query: 240 GFRRIRELRKAFELKLEMDQKETCWP 265
++ +A E+ ++ K + P
Sbjct: 657 ACNHAGDINQAIEIFTDIVSKRSMKP 682
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 81 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 140
P YS++IS K + A+ + EM + G PD Y LI H R +A +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 141 FQEML--LRGM---SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 195
+ L ++G+ P TY+ L+ A+ G+ +V L F ++ SP
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNAL--------FKDLDMSPVSPD 242
Query: 196 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 255
+ T+N ++ E +L M PD ++++ +I + + +E K
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEK------ 296
Query: 256 EMDQKETCWPLDQDTNESLV--KDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYL 310
M+Q T +SL+ K+ TF+S++ +Y DKAE K Y+
Sbjct: 297 -MEQ----------TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYI 345
Query: 311 PDSVSY-CLLL 320
P ++Y C+++
Sbjct: 346 PSFITYECMIM 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 26 SIPYVRIVELYHQMCV-RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 84
S +++ +E++ M R P+ Y +I + + + A+ + M G P A
Sbjct: 110 SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDAS 169
Query: 85 SYSRIISRFCKNKEMGKALEMKVEMLD--KGI---FPDVHAYGLLIQLLCHQRRLLEARD 139
Y+ +I+ ++ KALE LD KGI P+V Y +L++ ++ +
Sbjct: 170 VYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNA 229
Query: 140 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 199
LF+++ + +SP T++ +++AY G ++ + V+ + P ++T+
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEM----EAVLTR----MRSNECKPDIITF 281
Query: 200 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 250
N LI Q ++ + + + P +++++I + + R + KA
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 120/283 (42%), Gaps = 24/283 (8%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA--- 102
P TY + ++ + + ++A + +M +GL P D Y+ +IS + K++ + KA
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 103 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 162
LE + D PDV + +LI C R + + EM G+ TY+T+++
Sbjct: 202 LEYMKSVSD--CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDG 259
Query: 163 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 222
Y G F ++ + ++I+ G P + T N++I + +
Sbjct: 260 YGKAGMFEEMESVLADMIEDG-------DSLPDVCTLNSIIGSYGNGRNMRKMESWYSRF 312
Query: 223 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD 282
M + PD +++ +I F + +K + M+++ + L T +++
Sbjct: 313 QLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKR--FFSLTTVTYNIVIETFGKAG 370
Query: 283 TFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 325
E ++ K++YQ P+S++YC L+N K
Sbjct: 371 RI---------EKMDDVFRKMKYQG-VKPNSITYCSLVNAYSK 403
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Query: 4 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 63
PD T+N LI + +A Y ++ + M R S TY +I F R
Sbjct: 319 PDITTFNILILSFGKAGM-------YKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGR 371
Query: 64 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 123
+E+ + R M +G+ P++ +Y +++ + K + K + ++++ + D +
Sbjct: 372 IEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNC 431
Query: 124 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
+I L ++L+ +M R P T+ T+++ Y G F V L+ ++I
Sbjct: 432 IINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 31 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRI 89
+++ + +M E P+ TY ++ + V E +G+L M E +S + +Y+ +
Sbjct: 195 KVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTV 254
Query: 90 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 149
++ K L + EM+ GI PD+ +Y +I L + E+ LF EM R +
Sbjct: 255 LNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQI 314
Query: 150 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 179
P Y L++ G+F L DE+
Sbjct: 315 RPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 118/264 (44%), Gaps = 37/264 (14%)
Query: 1 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 60
M + D V++N+LI+ + ++ +S Y EL+ +M +++ ++ MI+ F
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQ---ISEAY----ELFEKMPGKDM----VSWTDMIKGFSG 384
Query: 61 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 120
+ + + V + +M EK +++ +IS F N +AL +ML K + P+ +
Sbjct: 385 KGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 180
+ ++ L+E + ++ + ++LV YC G + + + +
Sbjct: 441 FSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS 500
Query: 181 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS- 239
+ P++V+YN +I G + +AL++ + +P+ V++ A++S
Sbjct: 501 E------------PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
Query: 240 ---------GFRRIRELRKAFELK 254
G++ + ++ ++ ++
Sbjct: 549 CVHVGYVDLGWKYFKSMKSSYNIE 572
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 46 PNETTYRCMIRLFCDRNRVEEAVG-ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
PN T+ + + +R R ++V I+ M G SP + + ++S C ++ +A++
Sbjct: 133 PNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIK 192
Query: 105 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR-GMSP 151
+ EM G PDV +YG +I LC R+ + + +EM+ + G+SP
Sbjct: 193 VVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEMVSKAGISP 240
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 3 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 62
PD T N L+S+ C +K +++VE +M P+ +Y +I C
Sbjct: 168 SPDTGTCNYLVSSLCAVDKLDE----AIKVVE---EMSAAGCIPDVESYGAVINSLCLAR 220
Query: 63 RVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP-DVHA 120
+ + V I++ M K G+SP +++ + N+E+ KA+EM +E ++ +P + +
Sbjct: 221 KTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEM-IEFVESRDYPVEFES 279
Query: 121 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 169
Y ++++ R + A + M RG P + +VE GE+
Sbjct: 280 YEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIGEW 328
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 43 ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 102
E S E TY ++ +C E+A G+L M E ++P + SY+ +++ + K E K
Sbjct: 118 ETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKV 177
Query: 103 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG-MSPGGRTYDTLVE 161
M E+ + + PD + Y + ++ L + + +EM G ++P TY +
Sbjct: 178 PAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMAS 237
Query: 162 AYCLKG 167
Y G
Sbjct: 238 IYVDAG 243
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 7/144 (4%)
Query: 88 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 147
++ K+ +ALE+ ++ DK PDV A+ +++ + + E +F ML
Sbjct: 202 KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLAS 261
Query: 148 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 207
G+SP TY L++ G+ K +K L SP+ TY A+
Sbjct: 262 GVSPNAYTYSVLIKGLAADGKTHK-------DAKKYLLEMMGNGMSPNAATYTAVFEAFV 314
Query: 208 FFQRPDEALEILRGMPEMLLDPDE 231
+ + A E+L+ M PDE
Sbjct: 315 REGKEESARELLQEMKGKGFVPDE 338
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 33 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 92
+EL+ Q+ + P+ + ++ + + + +E + + M G+SP+A +YS +I
Sbjct: 217 LELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKG 276
Query: 93 FCKNKEMGK-ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 151
+ + K A + +EM+ G+ P+ Y + + + + AR+L QEM +G P
Sbjct: 277 LAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVP 336
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 35 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 94
+Y M + + PN T+R I L E A +L + L+P++ Y+ I++ +
Sbjct: 450 IYSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYF 509
Query: 95 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 154
+ K++ AL++ EM + + PD + LI + + + ++EM G+
Sbjct: 510 REKKVNSALKVLKEMKEADVKPDSVTFSYLINYCGEEATIAK---YYKEMKQAGVEVNKH 566
Query: 155 TYDTLVEAYCLKGEFSKV 172
Y +LV+AY G+F K
Sbjct: 567 VYMSLVKAYASCGQFEKA 584
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 20/207 (9%)
Query: 54 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 113
++ L+ D VE A + M E+ + S++ +IS F + + L++ +M
Sbjct: 161 LVVLYRDSGEVENAYKVFEEMPERNVV----SWTAMISGFAQEWRVDICLKLYSKMRKST 216
Query: 114 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 173
P+ + + L+ L + R + + L G+ ++L+ YC G+ F
Sbjct: 217 SDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAF 276
Query: 174 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR-GMPEMLLDPDEV 232
+ D+ K +V++N++I G +A+E+ MP+ PD +
Sbjct: 277 RIFDQFSNK------------DVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAI 324
Query: 233 SYSAVISGFRR---IRELRKAFELKLE 256
+Y V+S R ++E RK F L E
Sbjct: 325 TYLGVLSSCRHAGLVKEGRKFFNLMAE 351
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 44 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 103
+SP+ TY ++ C RVE A+ ILR M E+GLS +++ +I ++ ++
Sbjct: 229 MSPDTRTYDALVLGACKSGRVEAAMAILRRMEEEGLSVLYATHAHVIGEMVESGYYALSV 288
Query: 104 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
E + K D G L L ++R EA+ + +EM +RG+ G
Sbjct: 289 EFVMAYAGKDKRLDEENLGSLASKLIKRKRFKEAKMVLKEMSVRGLRMG 337
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 45 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 104
SP+ +Y ++ C +VE A+ ILR M E G++ +++ +I+ + LE
Sbjct: 209 SPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLE 268
Query: 105 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 152
+ K + D ++G L L ++R EA + +EM++RG+ G
Sbjct: 269 FVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLRMG 316
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 9 YNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAV 68
Y +I CE EK+ + +I R + H ELSP+ Y +I + D + EEA+
Sbjct: 134 YERIIRFLCE-EKSMSEAIRAFRSMIDDH-----ELSPSLEIYNSIIHSYADDGKFEEAM 187
Query: 69 GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 128
L M E GL P ++Y +I + K K + + M G D Y LLI+
Sbjct: 188 FYLNHMKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREF 247
Query: 129 CHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 183
L ++Q ++ R M+ T +++EAY G K+ +++I+ G
Sbjct: 248 SRGGLLKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETCNKIIRFG 302