Miyakogusa Predicted Gene
- Lj0g3v0257299.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0257299.1 CUFF.16915.1
(340 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 96 2e-19
gnl|LJGI|FS355577 94 7e-19
gnl|LJGI|TC75844 similar to UniRef100_A7PS13 Cluster: Chromosome... 94 7e-19
gnl|LJGI|CB826858 homologue to UniRef100_Q2LTW1 Cluster: SNF2-re... 86 2e-16
>gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 1275
Score = 95.6 bits (48), Expect = 2e-19
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 133 tctgcagccagatttaaaatattttcaccaactttttgttgtaccagaacaaccatatca 192
||||||||||| ||||||| ||||||||| |||| ||||| ||||||||| ||||||||
Sbjct: 360 tctgcagccagttttaaaacattttcaccggctttctgttgcaccagaacagccatatca 301
Query: 193 atagagctatttttcattgcagtc 216
| |||||||||| |||||||||||
Sbjct: 300 agagagctatttctcattgcagtc 277
>gnl|LJGI|FS355577
Length = 685
Score = 93.7 bits (47), Expect = 7e-19
Identities = 87/99 (87%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 60 tgttattctcatgttcacagtgagaccttgcataataacaaaggcaaagaaacaggttac 119
|||| |||||||| | ||||||| ||||||||||||||||||| || |||| ||| ||||
Sbjct: 37 tgttgttctcatgctaacagtgacaccttgcataataacaaag-catagaatcagtttac 95
Query: 120 acaaaccttgtggtctgcagccagatttaaaatattttc 158
||||| ||| || |||||||||||||| |||||||||||
Sbjct: 96 acaaatcttttgatctgcagccagattcaaaatattttc 134
>gnl|LJGI|TC75844 similar to UniRef100_A7PS13 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 769
Score = 93.7 bits (47), Expect = 7e-19
Identities = 87/99 (87%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 60 tgttattctcatgttcacagtgagaccttgcataataacaaaggcaaagaaacaggttac 119
|||| |||||||| | ||||||| ||||||||||||||||||| || |||| ||| ||||
Sbjct: 711 tgttgttctcatgctaacagtgacaccttgcataataacaaag-catagaatcagtttac 653
Query: 120 acaaaccttgtggtctgcagccagatttaaaatattttc 158
||||| ||| || |||||||||||||| |||||||||||
Sbjct: 652 acaaatcttttgatctgcagccagattcaaaatattttc 614
>gnl|LJGI|CB826858 homologue to UniRef100_Q2LTW1 Cluster: SNF2-related:Helicase
C-terminal:type III restriction enzyme; n=1; Syntrophus,
partial (1%)
Length = 521
Score = 85.7 bits (43), Expect = 2e-16
Identities = 104/123 (84%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 84 accttgcataataacaaaggcaaagaaacaggttacacaaaccttgtggtctgcagccag 143
||||| |||||||||| || || |||| |||||||||||| ||| || | ||||||||
Sbjct: 412 acctttcataataacatag-catagaatcaggttacacaattcttttgatatgcagccaa 354
Query: 144 atttaaaatattttcaccaactttttgttgtaccagaacaaccatatcaatagagctatt 203
||| ||||||||||| || |||| |||||||||| |||| ||||||||| |||||||||
Sbjct: 353 attcaaaatattttccacagctttctgttgtaccaaaacagccatatcaagagagctatt 294
Query: 204 ttt 206
|||
Sbjct: 293 ttt 291