Miyakogusa Predicted Gene

Lj0g3v0257079.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0257079.3 Non Chatacterized Hit- tr|I1MDL7|I1MDL7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max GN=G,89.08,0,DNA
REPAIR PROTEIN RAD51 HOMOLOG 2, R51H2,NULL; RECA/RAD51/RADA DNA
STRAND-PAIRING FAMILY MEMBER,NUL,CUFF.16895.3
         (1119 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS322645 similar to UniRef100_Q2VTQ5 Cluster: RAD51B; n...   791   0.0  

>gnl|LJGI|FS322645 similar to UniRef100_Q2VTQ5 Cluster: RAD51B; n=1; Arabidopsis
            thaliana|Rep: RAD51B - Arabidopsis thaliana (Mouse-ear
            cress), partial (34%)
          Length = 783

 Score =  791 bits (399), Expect = 0.0
 Identities = 402/403 (99%)
 Strand = Plus / Plus

                                                                        
Query: 717  gtcacttgctgaattttcacgaattccaattgtattgacaaatcaagtaagatctcaaac 776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26   gtcacttgctgaattttcacgaattccaattgtattgacaaatcaagtaagatctcaaac 85

                                                                        
Query: 777  tggtgatgaatctcgcatgtattcgtttcaagcacagagccactctattaaaaaagacaa 836
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86   tggtgatgaatctcgcatgtattcgtttcaagcacagagccactctattaaaaaagacaa 145

                                                                        
Query: 837  tcctgctacatatgattctcatcttgttgctgccttgggcattaattgggctcatgctgt 896
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146  tcctgctacatatgattctcatcttgttgctgccttgggcattaattgggctcatgctgt 205

                                                                        
Query: 897  gaccatccgtcttatacttgaatccaaatcaggtcaacgatttattaagttagcaaaatc 956
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 206  gaccatccgtcttatacttgaatccaaatcaggtcaacgatttatcaagttagcaaaatc 265

                                                                        
Query: 957  tcccatatcacctcccctggctttcccttttagcataacttcgtcaggggtggttctgtt 1016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266  tcccatatcacctcccctggctttcccttttagcataacttcgtcaggggtggttctgtt 325

                                                                        
Query: 1017 ggatgatgatgggatggagataagagggccagaaataaatactattcactgtcaaggtca 1076
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326  ggatgatgatgggatggagataagagggccagaaataaatactattcactgtcaaggtca 385

                                                       
Query: 1077 aaatgctctgtttaattttgaaggggtaaggcaccaatgatca 1119
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386  aaatgctctgtttaattttgaaggggtaaggcaccaatgatca 428