Miyakogusa Predicted Gene

Lj0g3v0242619.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0242619.1 tr|G7IAW7|G7IAW7_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_1g108820 PE=2 SV=1,41.29,7e-18,
,gene.g18953.t1.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46590.2                                                        82   2e-16
Glyma08g46590.1                                                        82   2e-16
Glyma13g43040.1                                                        73   9e-14
Glyma08g46320.1                                                        62   2e-10
Glyma18g35330.1                                                        49   2e-06

>Glyma08g46590.2 
          Length = 380

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 12/139 (8%)

Query: 7   SVDLPSLTTLHLIYVIFRGQREDLKKILNGSPNVEDLIVLGPCFGDPILIGGFKTLPKVV 66
           SVDLP LTTLHL   I   +R D+ ++L GSPN+E L V    F  P     F+ LPK++
Sbjct: 155 SVDLPLLTTLHLQSFIL--ERRDMAELLRGSPNLEYLFVGHMYFSGPE--ARFERLPKLL 210

Query: 67  KAHINALNIPFSAIPNVEFLHIEDMERRHNDKYINSYYREMPVFRNLMSLKLTFLHFP-S 125
           +A I   ++P   + NV+FL I+ ME +     I       P F+NL  L+L +      
Sbjct: 211 RATIAFGHVPLEVVNNVQFLRIDWMEHKEEANLI-------PEFQNLTHLELGYSECTRD 263

Query: 126 WVRVMEVLPYCPKLQSLAI 144
           WV V+EV+  CP LQ L I
Sbjct: 264 WVDVLEVIQRCPNLQILDI 282


>Glyma08g46590.1 
          Length = 515

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 12/139 (8%)

Query: 7   SVDLPSLTTLHLIYVIFRGQREDLKKILNGSPNVEDLIVLGPCFGDPILIGGFKTLPKVV 66
           SVDLP LTTLHL   I   +R D+ ++L GSPN+E L V    F  P     F+ LPK++
Sbjct: 333 SVDLPLLTTLHLQSFIL--ERRDMAELLRGSPNLEYLFVGHMYFSGPE--ARFERLPKLL 388

Query: 67  KAHINALNIPFSAIPNVEFLHIEDMERRHNDKYINSYYREMPVFRNLMSLKLTFLHFP-S 125
           +A I   ++P   + NV+FL I+ ME +     I       P F+NL  L+L +      
Sbjct: 389 RATIAFGHVPLEVVNNVQFLRIDWMEHKEEANLI-------PEFQNLTHLELGYSECTRD 441

Query: 126 WVRVMEVLPYCPKLQSLAI 144
           WV V+EV+  CP LQ L I
Sbjct: 442 WVDVLEVIQRCPNLQILDI 460


>Glyma13g43040.1 
          Length = 248

 Score = 73.2 bits (178), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 9/142 (6%)

Query: 6   GSVDLPSLTTLHLIYVIFRGQREDLKKILNGSPNVEDLIVLGPCFGDPILIGGFKTLPKV 65
            S DLP L  LHL +V F        ++L+G PN+ED+ +         +   FK LPK+
Sbjct: 77  SSADLPLLKILHLPHVFFSQNINFFGELLSGCPNLEDMELKYLGSTSNAIEAKFKKLPKL 136

Query: 66  VKAHINALNIPFSAIPNVEFLHIEDMERRHNDKYINSYYREMPVFRNLMSLKLTFL-HFP 124
           V+A +N   IP   + NV+FL I +   + N+  I       P F NL  ++ ++  H  
Sbjct: 137 VRAVMNKDQIPLEVVHNVQFLRI-NWRVKINEDLI-------PEFHNLTRIEFSYSEHNR 188

Query: 125 SWVRVMEVLPYCPKLQSLAIKK 146
           +W+ V++VL +CP LQ L I +
Sbjct: 189 NWMEVLKVLKHCPNLQHLVIDQ 210


>Glyma08g46320.1 
          Length = 379

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 14/145 (9%)

Query: 3   HCVGSVDLPSLTTLHLIYVIFRGQREDLKKILNGSPNVEDLIVLGPCFGDPILIGGFKTL 62
           + +G V LP+L TLHL       +   L K+L+  P +EDL      F +   +  F+ +
Sbjct: 148 NALGLVHLPALKTLHLDNFTML-ETWHLAKVLHECPILEDLRANNMFFYNKSDVVEFQIM 206

Query: 63  PKVVKAHINA---LNIPFSAIPNVEFLHIEDMERRHNDKYINSYYREMPVFRNLMSLKLT 119
           PK+VKA I       IP     NVE+L            +I       PVF NL+ L+++
Sbjct: 207 PKLVKAEIKVNFRFEIPLKVASNVEYLRF----------FIKPDTECFPVFHNLIHLEVS 256

Query: 120 FLHFPSWVRVMEVLPYCPKLQSLAI 144
           F     W  V E++ +CPKLQ+  +
Sbjct: 257 FWFVVRWNLVFEMIKHCPKLQTFVL 281


>Glyma18g35330.1 
          Length = 342

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 13/146 (8%)

Query: 5   VGSVDLPSLTTLHLIYVIFRGQREDLKKILNGSPNVEDLIVLGPCFGDPILIGG-FKTLP 63
           V SVDLPSL TLHL  V F   R  L +IL+  P +EDL++      +        + +P
Sbjct: 121 VSSVDLPSLKTLHLRKVHFVEPRL-LLQILSACPLLEDLLIRSLHVTNNFSSDEHLERMP 179

Query: 64  KVVKAHIN--ALNIPFSAIPNVEFLHIEDMERRHNDKYINSYYREMPVFRNLMSLKLTF- 120
           K+VKA I+  ++++  +   NVEFL  +      +D            F NL  ++L F 
Sbjct: 180 KLVKADISNASIDVQMATFYNVEFLRTQVGSDFFSD--------NKHTFLNLTHMELIFR 231

Query: 121 LHFPSWVRVMEVLPYCPKLQSLAIKK 146
             F    R++ +L  CP LQ L + +
Sbjct: 232 FRFNVLGRLINLLHECPNLQILVVDE 257