Miyakogusa Predicted Gene
- Lj0g3v0241319.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0241319.1 Non Chatacterized Hit- tr|I3T055|I3T055_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,92.73,0,coiled-coil,NULL; XH,Uncharacterised domain XH;
TRANSCRIPTION FACTOR X1-LIKE,NULL; RIBONUCLEASE P PR,CUFF.15801.1
(864 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO010457 weakly similar to UniRef100_A7PIT9 Cluster: Ch... 1306 0.0
gnl|LJGI|TC61574 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 343 1e-93
gnl|LJGI|TC78612 similar to UniRef100_A7PIT9 Cluster: Chromosome... 165 6e-40
gnl|LJGI|BW596862 weakly similar to UniRef100_A7NYZ4 Cluster: Ch... 117 1e-25
gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 117 1e-25
gnl|LJGI|GO026970 similar to UniRef100_A7NYZ4 Cluster: Chromosom... 54 1e-06
>gnl|LJGI|GO010457 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 747
Score = 1306 bits (659), Expect = 0.0
Identities = 711/719 (98%), Gaps = 7/719 (0%)
Strand = Plus / Plus
Query: 1 atgatcatggcaaacactagtcatgaaggggattccagtgagccatgtgagggtttggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atgatcatggcaaacactagtcatgaaggggattccagtgagccatgtgagggtttggta 95
Query: 61 agctttcagaaggaaactgaaccccagagccaggaaattgttgatttgcagcaaaaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 agctttcagaaggaaactgaaccccagagccaggaaattgttgatttgcagcaaaaactc 155
Query: 121 aatgacaaagctgcagttattagcaaactcaaagaatctctggacatggtcatgaatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aatgacaaagctgcagttattagcaaactcaaagaatctctggacatggtcatgaatatg 215
Query: 181 actgacaaagagtataagctgcatcaggaatgtggaaagctgagaggattattagatgag 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 actgacaaagagtataagcagcatcaggaatgtggaaagctgagaggattattagatgag 275
Query: 241 ttgaagcatgtggaagatgatgaagatgcaaaaattctgaagaagatagatgctttacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttgaagcatgtggaagatgatgaagatgcaaaaattctgaagaagatagatgctttacag 335
Query: 301 aagggtttaagtgaaaaggaagagtcacttgaagacttagatgcattgaaccactgccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aagggtttaagtgaaaaggaagagtcacttgaagacttagatgcattgaaccactgccta 395
Query: 361 atctctgtagagcgcaagaattttgatgagcttcaagaagcccgaaatgaattgattaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atctctgtagagcgcaagaattttgatgagcttcaagaagcccgaaatgaattgattaat 455
Query: 421 gatgacattatggagaagaagtcaaaatatgttcgtattggagttaagagaatgggggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gatgacattatggagaagaagtcaaaatatgttcgtattggagttaagagaatgggggag 515
Query: 481 attgacactagacccttccttgaagcaatgaaggaaagatataatgaggaagaagctgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 attgacactagacccttccttgaagcaatgaaggaaagatataatgaggaagaagctgca 575
Query: 541 gtgagagcttcagaactgagttcaatgtgggcagattatctgaaggacaccaattggcat 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 576 gtgagagcttcagaactgagttcaatgtgggcagattatctgaa-gacaccaattggcat 634
Query: 601 ccattcaaagttgtcacaattgaagggaaagaaaaggagattattgatgatgacgatgaa 660
||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
Sbjct: 635 ccattcaaagttgtcacaattgaaggg-aagaaaa-gagattattgatgatgacgatg-a 691
Query: 661 aagctgaatggtctcaaaaatgacattggtgaaggggcatacaatgctgttgtgactgc 719
|||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 692 aagctg-atggtctc-aaaatgacattggtgaa-gggcatacaatgctgttgtgactgc 747
>gnl|LJGI|TC61574 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 941
Score = 343 bits (173), Expect = 1e-93
Identities = 305/349 (87%)
Strand = Plus / Plus
Query: 466 aagagaatgggggagattgacactagacccttccttgaagcaatgaaggaaagatataat 525
|||||||||||||| | |||||| |||| ||||||||||| |||||| |||||||||||
Sbjct: 259 aagagaatgggggaactggacactggaccgttccttgaagccatgaagaaaagatataat 318
Query: 526 gaggaagaagctgcagtgagagcttcagaactgagttcaatgtgggcagattatctgaag 585
||||| ||||||| || |||||||||||||||| ||||| |||||||||| |||||||||
Sbjct: 319 gaggaggaagctgaagagagagcttcagaactgtgttcattgtgggcagaatatctgaag 378
Query: 586 gacaccaattggcatccattcaaagttgtcacaattgaagggaaagaaaaggagattatt 645
||| | ||||||||||||||| |||||||| |||||||||||||||||||||||| |||
Sbjct: 379 gacccagattggcatccattcagagttgtcataattgaagggaaagaaaaggagataatt 438
Query: 646 gatgatgacgatgaaaagctgaatggtctcaaaaatgacattggtgaaggggcatacaat 705
| ||||||||||||||| ||||||| || |||||||| || ||||||||||| || ||
Sbjct: 439 aaagatgacgatgaaaagttgaatggcctaaaaaatgaaatcggtgaaggggcgtataaa 498
Query: 706 gctgttgtgactgctttagtagagttcaatgaatataatcctagtgggcgatacgtaacc 765
|| || ||||||||||| |||| | ||||| || ||||| |||||||||||| |||||
Sbjct: 499 gcagtgatgactgctttaacagagataaatgattacaatcccagtgggcgatacataacc 558
Query: 766 aaagaattatggaactatagagagggaaggagagcaactctgaaagaag 814
|||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 559 tcagaattgtggaactataaagagggaaggagagcaactctgaaagaag 607
Score = 89.7 bits (45), Expect = 3e-17
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 253 gaagatgatgaagatgcaaaaattctgaagaagatagatgctttacagaagggtttaagt 312
|||||||||||||||||| || ||||||| ||| | ||||||||||| |||| ||| ||
Sbjct: 52 gaagatgatgaagatgcagaagttctgaacaaggttgatgctttacacaaggatttgaga 111
Query: 313 gaaaaggaagagtcacttgaagacttagatgcattgaacca 353
|||||||| |||||||| ||||| |||||| |||||||||
Sbjct: 112 gaaaaggagcagtcacttcaagacatagatgaattgaacca 152
>gnl|LJGI|TC78612 similar to UniRef100_A7PIT9 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 1863
Score = 165 bits (83), Expect = 6e-40
Identities = 134/151 (88%)
Strand = Plus / Plus
Query: 466 aagagaatgggggagattgacactagacccttccttgaagcaatgaaggaaagatataat 525
|||||||||||||| | |||||| |||| ||||||||||| |||||| |||||||||||
Sbjct: 1703 aagagaatgggggaactggacactggaccgttccttgaagccatgaagaaaagatataat 1762
Query: 526 gaggaagaagctgcagtgagagcttcagaactgagttcaatgtgggcagattatctgaag 585
||||| ||||||| || |||||||||||||||| ||||| |||||||||| |||||||||
Sbjct: 1763 gaggaggaagctgaagagagagcttcagaactgtgttcattgtgggcagaatatctgaag 1822
Query: 586 gacaccaattggcatccattcaaagttgtca 616
||| | ||||||||||||||| ||||||||
Sbjct: 1823 gacccagattggcatccattcagagttgtca 1853
Score = 89.7 bits (45), Expect = 3e-17
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 253 gaagatgatgaagatgcaaaaattctgaagaagatagatgctttacagaagggtttaagt 312
|||||||||||||||||| || ||||||| ||| | ||||||||||| |||| ||| ||
Sbjct: 1496 gaagatgatgaagatgcagaagttctgaacaaggttgatgctttacacaaggatttgaga 1555
Query: 313 gaaaaggaagagtcacttgaagacttagatgcattgaacca 353
|||||||| |||||||| ||||| |||||| |||||||||
Sbjct: 1556 gaaaaggagcagtcacttcaagacatagatgaattgaacca 1596
>gnl|LJGI|BW596862 weakly similar to UniRef100_A7NYZ4 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 490
Score = 117 bits (59), Expect = 1e-25
Identities = 119/139 (85%)
Strand = Plus / Plus
Query: 676 aaaaatgacattggtgaaggggcatacaatgctgttgtgactgctttagtagagttcaat 735
|||||||| || ||||||||||| || || || || ||||||||||| |||| | |||
Sbjct: 325 aaaaatgaaatcggtgaaggggcgtataaagcagtgatgactgctttaacagagataaat 384
Query: 736 gaatataatcctagtgggcgatacgtaaccaaagaattatggaactatagagagggaagg 795
|| || ||||| |||||||||||| ||||| |||||| |||||||||| ||||||||||
Sbjct: 385 gattacaatcccagtgggcgatacataacctcagaattgtggaactataaagagggaagg 444
Query: 796 agagcaactctgaaagaag 814
|||||||||||||||||||
Sbjct: 445 agagcaactctgaaagaag 463
>gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 1275
Score = 117 bits (59), Expect = 1e-25
Identities = 284/359 (79%)
Strand = Plus / Plus
Query: 456 tattggagttaagagaatgggggagattgacactagacccttccttgaagcaatgaagga 515
|||||| || ||||||||||| || ||||||||||||| ||| | ||||| ||||||
Sbjct: 685 tattggtgtcaagagaatgggtgaacttgacactagaccgttcgtagaagctatgaagat 744
Query: 516 aagatataatgaggaagaagctgcagtgagagcttcagaactgagttcaatgtgggcaga 575
| ||||||||||| ||| || | || || || ||||||||| ||||| | |||| |||
Sbjct: 745 gaaatataatgaggcagacgcagaagatagggcatcagaactgtgttcattatgggaaga 804
Query: 576 ttatctgaaggacaccaattggcatccattcaaagttgtcacaattgaagggaaagaaaa 635
||||||||||| | | ||||||||||| ||| || || |||||||||||| | |
Sbjct: 805 gtatctgaaggatcctgactggcatccatttaaaatttccatgattgaagggaaacatca 864
Query: 636 ggagattattgatgatgacgatgaaaagctgaatggtctcaaaaatgacattggtgaagg 695
||| || ||||||||||| ||||||||| ||| || || ||||| || || || |||||
Sbjct: 865 ggaaatcattgatgatgaagatgaaaagttgagaggactgaaaaacgaaatgggcgaagg 924
Query: 696 ggcatacaatgctgttgtgactgctttagtagagttcaatgaatataatcctagtgggcg 755
| ||| | || |||||||| ||||| |||| | |||||||||||||| || |||||
Sbjct: 925 agtctacgaagcggttgtgacagctttgagagagataaatgaatataatccaagcgggcg 984
Query: 756 atacgtaaccaaagaattatggaactatagagagggaaggagagcaactctgaaagaag 814
|| ||||| |||||||||||| |||| ||||||||||||||||||| ||||||||
Sbjct: 985 gtatataacctcagaattatggaattataaagagggaaggagagcaacttcgaaagaag 1043
>gnl|LJGI|GO026970 similar to UniRef100_A7NYZ4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 850
Score = 54.0 bits (27), Expect = 1e-06
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 578 atctgaaggacaccaattggcatccattcaaagttgtcacaattgaagggaaagaaaagg 637
||||||||||| || ||||| ||||||||||| | | ||||||| ||| || |||||
Sbjct: 690 atctgaaggacccccattggtatccattcaaaataattacaattggtggggaatcaaagg 631
Query: 638 agattattgatgatgacgatgaaaagctgaa 668
| ||||| ||||| || ||||||||||||||
Sbjct: 630 aaattatagatgaagaagatgaaaagctgaa 600