Miyakogusa Predicted Gene
- Lj0g3v0237069.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0237069.1 tr|D7LEK3|D7LEK3_ARALL Basic helix-loop-helix
family protein OS=Arabidopsis lyrata subsp. lyrata
GN=,35.45,5e-19,bHLH-MYC_N,Transcription factor MYC/MYB N-terminal;
EGL3 (ENHANCER OF GLABRA3), DNA BINDING / TRANSC,CUFF.15527.1
(712 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS339250 similar to UniRef100_Q41101 Cluster: Phaseolin... 1193 0.0
gnl|LJGI|AW719924 homologue to UniRef100_Q9MFC6 Cluster: Orf107b... 74 1e-12
gnl|LJGI|TC73714 similar to UniRef100_Q400L2 Cluster: MYC2; n=1;... 74 1e-12
>gnl|LJGI|FS339250 similar to UniRef100_Q41101 Cluster: Phaseolin G-box binding
protein PG1; n=1; Phaseolus vulgaris|Rep: Phaseolin
G-box binding protein PG1 - Phaseolus vulgaris (Kidney
bean) (French bean), partial (25%)
Length = 721
Score = 1193 bits (602), Expect = 0.0
Identities = 602/602 (100%)
Strand = Plus / Plus
Query: 1 atgacagagtaccctttgccaccctccatgaatctctggtctgacgacaactcctccgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgacagagtaccctttgccaccctccatgaatctctggtctgacgacaactcctccgtc 179
Query: 61 atggaggcctttatgagctcctcctccgacctctcctctctctggccacaccccgccgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atggaggcctttatgagctcctcctccgacctctcctctctctggccacaccccgccgtc 239
Query: 121 tccgccaccgccaccgctccaggacccgatgctcaaccgatgctcaacccggaaaccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tccgccaccgccaccgctccaggacccgatgctcaaccgatgctcaacccggaaaccctc 299
Query: 181 cagcagcgtcttctggcgctgatcgagggcgccaaggagagctggacgtacgctatcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cagcagcgtcttctggcgctgatcgagggcgccaaggagagctggacgtacgctatcttc 359
Query: 241 tggcagccgtcgtacgactactcctccggtgcccctcttcttggatggggtgacggttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tggcagccgtcgtacgactactcctccggtgcccctcttcttggatggggtgacggttac 419
Query: 301 tacaagggagaggaggacaaagataaggcgaaatccaccaaaacggcgtcgtcctcctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tacaagggagaggaggacaaagataaggcgaaatccaccaaaacggcgtcgtcctcctcc 479
Query: 361 gccgaacaggaccaccgcaagaaggtcctccgtgaactcaattcgttaatctccggcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gccgaacaggaccaccgcaagaaggtcctccgtgaactcaattcgttaatctccggcaac 539
Query: 421 accgcctcccccgacgtcgccgttgacgaagaggtcaccgacactgagtggttcttcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 accgcctcccccgacgtcgccgttgacgaagaggtcaccgacactgagtggttcttcctt 599
Query: 481 gtgtcgatgacgcagtctttcgtcaacggcagcggcctccctggtcaggcgtacttcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtgtcgatgacgcagtctttcgtcaacggcagcggcctccctggtcaggcgtacttcaat 659
Query: 541 tccaacgccgtctgggtttccggctccgaccgactctccggttctgcctgtgagcgggcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tccaacgccgtctgggtttccggctccgaccgactctccggttctgcctgtgagcgggcc 719
Query: 601 cg 602
||
Sbjct: 720 cg 721
>gnl|LJGI|AW719924 homologue to UniRef100_Q9MFC6 Cluster: Orf107b protein; n=1; Beta
vulgaris subsp. vulgaris|Rep: Orf107b protein - Beta
vulgaris subsp. vulgaris, partial (78%)
Length = 505
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 28 atgaatctctggtctgacgacaactcctccgtcatggaggcctttatgagctcctcc 84
|||||||||||| ||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 86 atgaatctctggagcgacgacaactcctccgtcatggaggccttcatgacctcctcc 142
>gnl|LJGI|TC73714 similar to UniRef100_Q400L2 Cluster: MYC2; n=1; Catharanthus
roseus|Rep: MYC2 - Catharanthus roseus (Rosy periwinkle)
(Madagascar periwinkle), partial (17%)
Length = 588
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 28 atgaatctctggtctgacgacaactcctccgtcatggaggcctttatgagctcctcc 84
|||||||||||| ||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 123 atgaatctctggagcgacgacaactcctccgtcatggaggccttcatgacctcctcc 179
Score = 71.9 bits (36), Expect = 5e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 445 gacgaagaggtcaccgacactgagtggttcttccttgtgtcgatgacgcagtctttcgtc 504
|||||||||||||||||||| || |||||||||||||| || ||||| ||||| || |||
Sbjct: 525 gacgaagaggtcaccgacacggaatggttcttccttgtttccatgacccagtcgtttgtc 584
Query: 505 aacg 508
||||
Sbjct: 585 aacg 588