Miyakogusa Predicted Gene
- Lj0g3v0234229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0234229.1 tr|G7JRF4|G7JRF4_MEDTR ATP-dependent DNA helicase
PIF1 OS=Medicago truncatula GN=MTR_4g036250 PE=4
S,60.16,0,UNCHARACTERIZED,NULL; seg,NULL,CUFF.15325.1
(263 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g12420.1 63 3e-10
Glyma20g16580.1 60 3e-09
>Glyma13g12420.1
Length = 681
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 167 LVKDLTEMIDIHNPVAKLFRRVRDFANHNEGSNFYLRLFRRRNKDPRVYNLLTSDEVAGL 226
+V L+ M+D HN AK FR RD ++ +N L+L R KD RVYN+ E+A L
Sbjct: 182 IVSALSHMLDQHNSHAKSFRMARDRLAADQANNIKLQLIAARGKDGRVYNMPNVPEIAAL 241
Query: 227 IVGDIENLEAGRDIIVKKQSEWLE 250
IVGD + RDIIV+ Q+ L+
Sbjct: 242 IVGDFHP-GSKRDIIVETQNGELQ 264
>Glyma20g16580.1
Length = 197
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 2 YASAEVEELLDFGDATYTCGYCNSIMWYEERSEKSRQPLNPEFSICCMRGKVDXXXXXXX 61
Y E D GD C YC ++MW++ER K+R N F +CC GK+
Sbjct: 104 YYMHTASEYFDLGDPLMMCQYCEALMWHQERIHKNRHTPNHTFHLCCGDGKMQQPFLKTP 163
Query: 62 XXXXXXXISGVDPRSKNFKENIRAYNSLFSFTSLGGKI 99
+ NF+++IR YN +F+F G K+
Sbjct: 164 PLILQHLLFD------NFQQHIRTYNLMFAFILPGVKL 195