Miyakogusa Predicted Gene

Lj0g3v0231139.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0231139.2 Non Characterized Hit- tr|I1NI05|I1NI05_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29912
PE,70.79,2e-19,seg,NULL,CUFF.15136.2
         (90 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073670.1 | hypothetical protein | HC | chr1:32685486-3268...   108   1e-24

>Medtr1g073670.1 | hypothetical protein | HC |
          chr1:32685486-32684414 | 20130731
          Length = 298

 Score =  108 bits (269), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/90 (65%), Positives = 73/90 (81%), Gaps = 3/90 (3%)

Query: 1  MGCFLACFGLSNKRKRRKTLYNVLAGGHQKYGNYEVLAT-TEKSIIPYSGVR--DKRKEQ 57
          MGCFL CFGL++KRKRRKTLY VLAG +QKYGNY+VLAT TEKSI+PYS +R  D+ KE+
Sbjct: 1  MGCFLQCFGLTSKRKRRKTLYKVLAGENQKYGNYQVLATVTEKSIVPYSKIRGGDQEKEK 60

Query: 58 NGVXXXXXXXVTFNLNVQIYEPDPTAYQVL 87
          +GV       V+FNLNV++YE +P +YQVL
Sbjct: 61 SGVKSKKKKKVSFNLNVEMYEANPGSYQVL 90