Miyakogusa Predicted Gene

Lj0g3v0226749.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0226749.1 CUFF.14767.1
         (334 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV418552 weakly similar to UniRef100_Q54UJ3 Cluster: Pa...   248   2e-65
gnl|LJGI|AV767176                                                      74   6e-13
gnl|LJGI|TC70578 similar to UniRef100_A7P346 Cluster: Chromosome...    60   9e-09

>gnl|LJGI|AV418552 weakly similar to UniRef100_Q54UJ3 Cluster: Paired amphipathic
           helix (PAH) containing protein; n=1; Dictyostelium
           discoideum|Rep: Paired amphipathic helix (PAH)
           containing protein - Dictyostelium discoideum (Slime
           mold), partial (4%)
          Length = 386

 Score =  248 bits (125), Expect = 2e-65
 Identities = 125/125 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaacagcaccaacagatgctatcatattttcaaccccagcagcagcttcttcctcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  atgcaacagcaccaacagatgctatcatattttcaaccccagcagcagcttcttcctcac 127

                                                                       
Query: 61  ttgcagctacagcagcagctccaacaacagcaacttgcacagctccaacaacaactctcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ttgcagctacagcagcagctccaacaacagcaacttgcacagctccaacaacaactctcg 187

                
Query: 121 cagct 125
           |||||
Sbjct: 188 cagct 192



 Score =  135 bits (68), Expect = 2e-31
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                       
Query: 252 cttgccgcagcagcagtttcaacaacttcctcagcatcaacagatggttggggaaggaat 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttgccgcagcagcagtttcaacaacttcctcagcatcaacagatggttggggaaggaat 378

                   
Query: 312 gggtcaaa 319
           ||||||||
Sbjct: 379 gggtcaaa 386



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 76  cagctccaacaacagcaacttgcacagctccaacaacaactctcgcagct 125
           |||||||||||||| ||||||||||| ||||||||||||||  |||||||
Sbjct: 227 cagctccaacaacaacaacttgcacaactccaacaacaactggcgcagct 276



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 78  gctccaacaacagcaacttgcacagctccaacaacaac 115
           ||||||||| ||||||||  ||||||||||||||||||
Sbjct: 205 gctccaacagcagcaactaacacagctccaacaacaac 242


>gnl|LJGI|AV767176 
          Length = 251

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                
Query: 298 gttggggaaggaatgggtcaaaaaacctatgtttagt 334
           |||||||||||||||||||||||||||||||||||||
Sbjct: 251 gttggggaaggaatgggtcaaaaaacctatgtttagt 215


>gnl|LJGI|TC70578 similar to UniRef100_A7P346 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 803

 Score = 60.0 bits (30), Expect = 9e-09
 Identities = 47/52 (90%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                               
Query: 270 tcaacaacttcctca---gcatcaacagatggttggggaaggaatgggtcaa 318
           |||||||||||||||   ||| |||||||||||||||| |||||||||||||
Sbjct: 214 tcaacaacttcctcaacagcagcaacagatggttggggcaggaatgggtcaa 265