Miyakogusa Predicted Gene

Lj0g3v0223599.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0223599.1 Non Chatacterized Hit- tr|I1LBP7|I1LBP7_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,68.12,0,SET,SET
domain; Pre-SET,Pre-SET domain; WIYLD,WIYLD domain; PRE_SET,Pre-SET
domain; SAM_MT43_3,Histo,CUFF.14529.1
         (2097 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV774472                                                     547   e-155

>gnl|LJGI|AV774472 
          Length = 361

 Score =  547 bits (276), Expect = e-155
 Identities = 340/360 (94%), Gaps = 1/360 (0%)
 Strand = Plus / Plus

                                                                        
Query: 677  atggaaatccccgtgtcaaatctctatccgctgagcatcagaatctgcacaagaaagaag 736
            ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1    atggaaatccccgagtcaaatctctatccgatgagcatcagaatctgcacaagaaagaag 60

                                                                        
Query: 737  atattcccccatgctataataacacccgtaatggtcatattattgcttcttcatctcaag 796
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atattcccccatgctataataacacccgtaatggtcatattattgcttcttcatctcaag 120

                                                                        
Query: 797  gagaagttaaaatgtctttaaattgtgatgctgccttggcacttccaaacttccaaattc 856
            ||||||| ||||||| ||||||| |||||||||||||||||||||||||||| ||||| |
Sbjct: 121  gagaagtgaaaatgtatttaaatagtgatgctgccttggcacttccaaacttacaaatac 180

                                                                        
Query: 857  ctaaattggatgatgtcatgaagtctgtggaggagaaatatctaaggtcttgcgt-agct 915
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||
Sbjct: 181  ctaaattggatgatgtcatgaagtctgtggaggagaaatatctaaggtctagcgtaaact 240

                                                                        
Query: 916  gttcagccccaactatcgatggccaagttattaaatgaattatgtggaagatttttgaag 975
            || |||  |||| ||||||||||||||| ||||||||||||||||||||||| |  ||||
Sbjct: 241  gtacagaaccaaatatcgatggccaagtaattaaatgaattatgtggaagatataagaag 300

                                                                        
Query: 976  ctgggcttgaatttaaaccgaaaggggacaaaaccagaacatgccaattcacaaaatgtg 1035
            |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 301  ctgggcttgaatttaaaccggaaggggacaaaaacagaacatgccaattcacaaaatgtg 360