Miyakogusa Predicted Gene
- Lj0g3v0222659.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0222659.1 Non Chatacterized Hit- tr|I1JMB0|I1JMB0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,95.74,0,Sec23_helical,Sec23/Sec24, helical domain;
Gelsolin,Gelsolin domain; PROTEIN TRANSPORT PROTEIN SEC23,CUFF.14457.1
(708 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67608 similar to UniRef100_A7QJV5 Cluster: Chromosome... 946 0.0
gnl|LJGI|AV427057 homologue to UniRef100_A7LIT7 Cluster: Transpo... 66 3e-10
>gnl|LJGI|TC67608 similar to UniRef100_A7QJV5 Cluster: Chromosome undetermined
scaffold_108, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (21%)
Length = 649
Score = 946 bits (477), Expect = 0.0
Identities = 477/477 (100%)
Strand = Plus / Plus
Query: 232 ttcagaatgattttataccgagaaaatgttgccaattctgttgtcatggttcagccttcg 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcagaatgattttataccgagaaaatgttgccaattctgttgtcatggttcagccttcg 60
Query: 292 ttgatttcttattcattcaattctggtcctgaaccagctcttcttgatgtcgcagccatt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgatttcttattcattcaattctggtcctgaaccagctcttcttgatgtcgcagccatt 120
Query: 352 gcggctgacaggatcctgcttttggattcatttttcactgttgttatttttcatggttca 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggctgacaggatcctgcttttggattcatttttcactgttgttatttttcatggttca 180
Query: 412 accattgctcaatggcgaaaggctggatatcataatgaacccgaacatcaggcatttgct 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accattgctcaatggcgaaaggctggatatcataatgaacccgaacatcaggcatttgct 240
Query: 472 cagttgctacgagctcctcatgatgatgcagatttaataatgaaagagagatttcctgta 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagttgctacgagctcctcatgatgatgcagatttaataatgaaagagagatttcctgta 300
Query: 532 cctcgattggttgtttgcgatcagcatggttctcaggctcgatttctgctagccaagttg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctcgattggttgtttgcgatcagcatggttctcaggctcgatttctgctagccaagttg 360
Query: 592 aatccttctgccacttataacaccgaaacttctcatcctggaggggatattatctttacg 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatccttctgccacttataacaccgaaacttctcatcctggaggggatattatctttacg 420
Query: 652 gatgatgttagctttgaggtcttcctggatcatttacagagattagttgttcaatga 708
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatgatgttagctttgaggtcttcctggatcatttacagagattagttgttcaatga 477
>gnl|LJGI|AV427057 homologue to UniRef100_A7LIT7 Cluster: Transport protein; n=1;
Corchorus olitorius|Rep: Transport protein - Corchorus
olitorius, partial (33%)
Length = 265
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 178 cgacgctctcaatttgttcaggtctttaacaacagcccagatgagactgcttacttc 234
|||||||| || ||||| ||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 128 cgacgctcacagtttgtacaggtttttaacaacagtccagatgagactgcatacttc 184