Miyakogusa Predicted Gene

Lj0g3v0215159.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0215159.1 Non Chatacterized Hit- tr|G7LCQ7|G7LCQ7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,54.69,0.00000000002,seg,NULL; FAR1,FAR1 DNA binding
domain,CUFF.13873.1
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g28230.1                                                        49   1e-06

>Glyma13g28230.1 
          Length = 762

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 54  GLEFSTEEEGCLFYHKYAQYRGFASRKDDVYKD-NDGNIVTRQLVCNKAGRRHE 106
           G EFS+  E   FYH YA + GF  R   +++  NDG+I +R+ VC+K G +H 
Sbjct: 188 GQEFSSPNEAYQFYHAYAAHLGFGVRIGQLFRSKNDGSITSRRFVCSKEGFQHP 241