Miyakogusa Predicted Gene

Lj0g3v0214859.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0214859.1 Non Chatacterized Hit- tr|I1LGN1|I1LGN1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58364 PE,50,0.00001,
,CUFF.13848.1
         (147 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g03390.1                                                        54   4e-08

>Glyma11g03390.1 
          Length = 448

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 7/46 (15%)

Query: 81  DWIADHCGVPVVEEWRMQMYNVVSKNKLV-------QWDYTTVVLQ 119
           +WIAD CGVP +EEWR QMY   SKN+++       +WD   +VLQ
Sbjct: 393 NWIADQCGVPSIEEWRRQMYIATSKNRVLRPESYRDEWDDDDLVLQ 438