Miyakogusa Predicted Gene

Lj0g3v0206009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206009.1 Non Characterized Hit- tr|I1N4Y6|I1N4Y6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29316
PE,39.19,2e-19,seg,NULL; RNA POLYMERASE II CTD PHOSPHATASE,NULL;
NIF,NLI interacting factor; FCP1_euk: FCP1-like ph,CUFF.13169.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g121140.2 | carboxy-terminal domain phosphatase-like prote...   170   5e-43
Medtr4g121140.1 | carboxy-terminal domain phosphatase-like prote...   170   6e-43
Medtr2g063873.1 | carboxy-terminal domain phosphatase-like prote...   157   3e-39
Medtr2g063837.1 | carboxy-terminal domain phosphatase-like prote...   156   6e-39
Medtr6g092010.1 | carboxy-terminal domain phosphatase-like prote...   156   8e-39
Medtr2g048610.1 | carboxy-terminal domain phosphatase-like prote...   149   8e-37
Medtr2g063913.1 | carboxy-terminal domain phosphatase-like prote...   149   1e-36
Medtr4g119070.1 | carboxy-terminal domain phosphatase-like prote...    89   2e-18
Medtr2g064110.1 | carboxy-terminal domain phosphatase-like prote...    87   5e-18
Medtr7g021190.1 | carboxy-terminal domain phosphatase-like prote...    86   9e-18
Medtr7g021190.2 | carboxy-terminal domain phosphatase-like prote...    86   1e-17

>Medtr4g121140.2 | carboxy-terminal domain phosphatase-like protein
           | HC | chr4:50177908-50171229 | 20130731
          Length = 444

 Score =  170 bits (430), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 81/102 (79%), Positives = 89/102 (87%)

Query: 38  TQTDSQEDISNGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKL 97
            +TDS ED+S GSLFKLE +  MTKLRPFVRTFLKEAS+MFEMYIYTM  R YALE+ KL
Sbjct: 166 NETDSLEDVSKGSLFKLEHMHMMTKLRPFVRTFLKEASEMFEMYIYTMGDRPYALEMAKL 225

Query: 98  LDPQGEYFNDKVISRYDGTQKHQKGLDVVLGPESAILILDDT 139
           LDPQGEYFN KVISR DGTQ+HQKGLD+VLG ESA+LILDDT
Sbjct: 226 LDPQGEYFNSKVISRDDGTQRHQKGLDIVLGQESAVLILDDT 267


>Medtr4g121140.1 | carboxy-terminal domain phosphatase-like protein
           | HC | chr4:50177925-50171180 | 20130731
          Length = 447

 Score =  170 bits (430), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 81/102 (79%), Positives = 89/102 (87%)

Query: 38  TQTDSQEDISNGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKL 97
            +TDS ED+S GSLFKLE +  MTKLRPFVRTFLKEAS+MFEMYIYTM  R YALE+ KL
Sbjct: 169 NETDSLEDVSKGSLFKLEHMHMMTKLRPFVRTFLKEASEMFEMYIYTMGDRPYALEMAKL 228

Query: 98  LDPQGEYFNDKVISRYDGTQKHQKGLDVVLGPESAILILDDT 139
           LDPQGEYFN KVISR DGTQ+HQKGLD+VLG ESA+LILDDT
Sbjct: 229 LDPQGEYFNSKVISRDDGTQRHQKGLDIVLGQESAVLILDDT 270


>Medtr2g063873.1 | carboxy-terminal domain phosphatase-like protein
           | LC | chr2:27026009-27029965 | 20130731
          Length = 445

 Score =  157 bits (398), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 79/105 (75%), Positives = 87/105 (82%)

Query: 38  TQTDSQEDISNGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKL 97
           T TDS EDIS GSLF LE V+ MTKLRPFVRTFLKEAS+MFEMYIYTM  RRY+LE+ KL
Sbjct: 166 THTDSLEDISKGSLFMLEHVQVMTKLRPFVRTFLKEASEMFEMYIYTMGDRRYSLEMAKL 225

Query: 98  LDPQGEYFNDKVISRYDGTQKHQKGLDVVLGPESAILILDDTHRV 142
           LDPQG YF DKVISR DGTQK+ K LD+VLG E++ILILDD   V
Sbjct: 226 LDPQGLYFKDKVISREDGTQKNVKDLDLVLGTENSILILDDKEEV 270


>Medtr2g063837.1 | carboxy-terminal domain phosphatase-like protein
           | LC | chr2:26986203-26991064 | 20130731
          Length = 440

 Score =  156 bits (395), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 77/105 (73%), Positives = 88/105 (83%)

Query: 38  TQTDSQEDISNGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKL 97
           T TDS EDIS GSLF LE V+ MTKLRPFVRTFLKEAS+MFEMYIYTM  R+Y+LE+ +L
Sbjct: 166 THTDSLEDISKGSLFMLEHVQVMTKLRPFVRTFLKEASEMFEMYIYTMGDRQYSLEMARL 225

Query: 98  LDPQGEYFNDKVISRYDGTQKHQKGLDVVLGPESAILILDDTHRV 142
           LDPQGEYF DKVISR DGTQK+ K LD+VLG E++I+ILDD   V
Sbjct: 226 LDPQGEYFKDKVISRDDGTQKNVKDLDLVLGTENSIIILDDKEEV 270


>Medtr6g092010.1 | carboxy-terminal domain phosphatase-like protein
           | LC | chr6:34687176-34693321 | 20130731
          Length = 467

 Score =  156 bits (394), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 77/105 (73%), Positives = 88/105 (83%)

Query: 38  TQTDSQEDISNGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKL 97
           T TDS EDIS GSLF LE V+ MTKLRPFVRTFLKEAS+MFEMYIYTM  R+Y+LE+ +L
Sbjct: 193 THTDSLEDISKGSLFMLEHVQVMTKLRPFVRTFLKEASEMFEMYIYTMGDRQYSLEMARL 252

Query: 98  LDPQGEYFNDKVISRYDGTQKHQKGLDVVLGPESAILILDDTHRV 142
           LDPQGEYF DKVISR DGTQK+ K LD+VLG E++I+ILDD   V
Sbjct: 253 LDPQGEYFKDKVISRDDGTQKNVKDLDLVLGTENSIVILDDKEEV 297


>Medtr2g048610.1 | carboxy-terminal domain phosphatase-like protein
           | LC | chr2:21431922-21435248 | 20130731
          Length = 366

 Score =  149 bits (377), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 73/105 (69%), Positives = 86/105 (81%)

Query: 38  TQTDSQEDISNGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKL 97
           T TDS EDI+ G LF LE  +RM KLRPFVRTFLKEASKMFEMYIYTM  RRY+LE+ +L
Sbjct: 90  TCTDSLEDIARGRLFVLEHRQRMAKLRPFVRTFLKEASKMFEMYIYTMGDRRYSLEMARL 149

Query: 98  LDPQGEYFNDKVISRYDGTQKHQKGLDVVLGPESAILILDDTHRV 142
           LDPQG++F DKVISR DGT+  +K L++VLG ES+ILILDD  +V
Sbjct: 150 LDPQGKFFKDKVISRDDGTEMKEKDLNLVLGTESSILILDDNKKV 194


>Medtr2g063913.1 | carboxy-terminal domain phosphatase-like protein
           | LC | chr2:27079146-27073853 | 20130731
          Length = 446

 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/105 (70%), Positives = 86/105 (81%)

Query: 38  TQTDSQEDISNGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKL 97
           T TDS EDIS GSLF L  ++ MTKLRPFVRTFLK+AS+MFEMYIYTM  R+Y+LE+ +L
Sbjct: 167 THTDSLEDISKGSLFMLAHMQVMTKLRPFVRTFLKQASEMFEMYIYTMGDRQYSLEMARL 226

Query: 98  LDPQGEYFNDKVISRYDGTQKHQKGLDVVLGPESAILILDDTHRV 142
           LDPQ EYF DKVISR DGTQK+ K LD+VLG E++ILILDD   V
Sbjct: 227 LDPQEEYFKDKVISREDGTQKNVKDLDLVLGTENSILILDDKEEV 271


>Medtr4g119070.1 | carboxy-terminal domain phosphatase-like protein,
           putative | LC | chr4:49315656-49310923 | 20130731
          Length = 1074

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 3/95 (3%)

Query: 51  LFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVI 110
           LF+L  +   TKLRP V  FL++ASK+FEM++YTM ++ YA E+ K+LDP G  F  +VI
Sbjct: 799 LFRLPHMGMWTKLRPGVWNFLEKASKLFEMHLYTMGNKLYATEMAKVLDPNGVLFAGRVI 858

Query: 111 SRYDGTQK---HQKGLDVVLGPESAILILDDTHRV 142
           SR D  +      K L+ VLG ES+++I+DD+ RV
Sbjct: 859 SRGDDPETVDIKCKDLEGVLGLESSVVIIDDSPRV 893


>Medtr2g064110.1 | carboxy-terminal domain phosphatase-like protein,
           putative | LC | chr2:27152477-27153886 | 20130731
          Length = 172

 Score = 87.0 bits (214), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 49/64 (76%), Gaps = 6/64 (9%)

Query: 60  MTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVISRYDGTQKH 119
           M KLRPFVRTFLKEAS++FEMYIYTM  R+Y+LE+ KLLDPQ EYF DKV       QKH
Sbjct: 1   MNKLRPFVRTFLKEASEVFEMYIYTMGIRQYSLEMAKLLDPQVEYFKDKV------WQKH 54

Query: 120 QKGL 123
           +  L
Sbjct: 55  KDNL 58


>Medtr7g021190.1 | carboxy-terminal domain phosphatase-like protein,
            putative | HC | chr7:6664027-6656896 | 20130731
          Length = 1209

 Score = 86.3 bits (212), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 3/95 (3%)

Query: 51   LFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVI 110
            LF+   +   TKLRP V  FL++A K+FEM++YTM ++ YA E+ K+LDP+G  F  +VI
Sbjct: 941  LFRFPHMGMWTKLRPGVWNFLEKAGKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 1000

Query: 111  SRYDGTQ---KHQKGLDVVLGPESAILILDDTHRV 142
            SR D  +      K L+ VLG ES+++I+DD+ RV
Sbjct: 1001 SRGDDAETADTKSKDLEGVLGMESSVVIIDDSVRV 1035


>Medtr7g021190.2 | carboxy-terminal domain phosphatase-like protein,
           putative | HC | chr7:6664015-6656896 | 20130731
          Length = 958

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 3/95 (3%)

Query: 51  LFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVI 110
           LF+   +   TKLRP V  FL++A K+FEM++YTM ++ YA E+ K+LDP+G  F  +VI
Sbjct: 690 LFRFPHMGMWTKLRPGVWNFLEKAGKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 749

Query: 111 SRYDGTQ---KHQKGLDVVLGPESAILILDDTHRV 142
           SR D  +      K L+ VLG ES+++I+DD+ RV
Sbjct: 750 SRGDDAETADTKSKDLEGVLGMESSVVIIDDSVRV 784