Miyakogusa Predicted Gene

Lj0g3v0206009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206009.1 Non Chatacterized Hit- tr|I1N4Y6|I1N4Y6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29316
PE,39.19,2e-19,seg,NULL; RNA POLYMERASE II CTD PHOSPHATASE,NULL;
NIF,NLI interacting factor; FCP1_euk: FCP1-like ph,CUFF.13169.1
         (150 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58003.1 | Symbols: CPL4 | C-terminal domain phosphatase-like...   140   5e-34
AT5G54210.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    92   1e-19
AT3G19595.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    90   6e-19
AT3G17550.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    89   2e-18
AT1G20320.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    87   4e-18
AT3G19600.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    86   1e-17
AT2G04930.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    85   2e-17
AT2G33540.1 | Symbols: CPL3, ATCPL3 | C-terminal domain phosphat...    80   6e-16
AT1G43610.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    79   2e-15
AT1G43600.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    78   2e-15
AT5G23470.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    75   2e-14
AT2G02290.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    67   3e-12

>AT5G58003.1 | Symbols: CPL4 | C-terminal domain phosphatase-like 4
           | chr5:23480066-23481924 FORWARD LENGTH=440
          Length = 440

 Score =  140 bits (352), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 66/95 (69%), Positives = 79/95 (83%)

Query: 45  DISNGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEY 104
           ++S GSLF LE ++ MTKLRPFV +FLKEAS+MF MYIYTM  R YA ++ KLLDP+GEY
Sbjct: 161 NVSGGSLFLLEFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEY 220

Query: 105 FNDKVISRYDGTQKHQKGLDVVLGPESAILILDDT 139
           F D+VISR DGT +H+K LDVVLG ESA+LILDDT
Sbjct: 221 FGDRVISRDDGTVRHEKSLDVVLGQESAVLILDDT 255


>AT5G54210.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr5:22008612-22009532
           FORWARD LENGTH=306
          Length = 306

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 8/106 (7%)

Query: 39  QTDSQEDIS--NGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVK 96
           + DS+ED+   NG        E + KLRPFV  FLKEA+KMF MY+YTM  R YA+ V+ 
Sbjct: 118 EEDSREDLRRLNGGY----SSEFLIKLRPFVHEFLKEANKMFSMYVYTMGDRDYAMNVLN 173

Query: 97  LLDPQGEYFNDKVISRYDGTQKHQKGLDVVLGPESAILILDDTHRV 142
           L+DP+  YF D+VI+R      + K LD+VL  E  ++I+DDT  V
Sbjct: 174 LIDPEKVYFGDRVITR--NESPYIKTLDLVLADECGVVIVDDTPHV 217


>AT3G19595.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr3:6808585-6809508 REVERSE
           LENGTH=307
          Length = 307

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 66/96 (68%), Gaps = 6/96 (6%)

Query: 51  LFKLECV----ERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFN 106
           L+K++ V    E +TKLRPF+R FLKEA++ F MY+YT  SR YA +V++L+DP+  YF 
Sbjct: 130 LWKIKAVGDPMEFLTKLRPFLRDFLKEANEFFTMYVYTKGSRVYAKQVLELIDPKKLYFG 189

Query: 107 DKVISRYDGTQKHQKGLDVVLGPESAILILDDTHRV 142
           D+VI++ +    H K LD VL  E  ++I+DDT  V
Sbjct: 190 DRVITKTESP--HMKTLDFVLAEERGVVIVDDTRNV 223


>AT3G17550.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr3:6005114-6006004 REVERSE
           LENGTH=296
          Length = 296

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 69/100 (69%), Gaps = 3/100 (3%)

Query: 51  LFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVI 110
           L+KL+  + +TKLRPFV  FLKEA+++F MY+YTM +R YA  ++KL+DP+  YF D+VI
Sbjct: 124 LWKLDS-DYLTKLRPFVHEFLKEANELFTMYVYTMGTRVYAESLLKLIDPKRIYFGDRVI 182

Query: 111 SRYDGTQKHQKGLDVVLGPESAILILDDTHRVSSFLVSDL 150
           +R      + K LD+VL  E  ++I+DDT  V +   S+L
Sbjct: 183 TR--DESPYVKTLDLVLAEERGVVIVDDTSDVWTHHKSNL 220


>AT1G20320.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr1:7033846-7034874 REVERSE
           LENGTH=342
          Length = 342

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 2/85 (2%)

Query: 58  ERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVISRYDGTQ 117
           E + KLRPFV  FLKEA+++F MY+YTM +R YA  V+K +DP+  YF D+VI+R +   
Sbjct: 119 EMLIKLRPFVHEFLKEANEIFSMYVYTMGNRDYAQAVLKWIDPKKVYFGDRVITRDES-- 176

Query: 118 KHQKGLDVVLGPESAILILDDTHRV 142
              K LD+VL  E  ++I+DDT  V
Sbjct: 177 GFSKTLDLVLADECGVVIVDDTRHV 201


>AT3G19600.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr3:6810710-6811742 REVERSE
           LENGTH=302
          Length = 302

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 2/86 (2%)

Query: 57  VERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVISRYDGT 116
           +E + KLRPF+  FLKEA++MF MY+YT  +R YA  ++KL+DP+  YF  +VI+R +  
Sbjct: 141 IEHLVKLRPFLCEFLKEANEMFTMYVYTKGTRPYAEAILKLIDPKKLYFGHRVITRNESP 200

Query: 117 QKHQKGLDVVLGPESAILILDDTHRV 142
             H K LD+VL  E  ++I+DDT + 
Sbjct: 201 --HTKTLDMVLADERGVVIVDDTRKA 224


>AT2G04930.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr2:1733638-1734471 REVERSE
           LENGTH=277
          Length = 277

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 62/83 (74%), Gaps = 2/83 (2%)

Query: 57  VERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVISRYDGT 116
           ++R+ KLRPFVR FLKEA++MF M++YTM SR YA  +++++DP+  YF ++VI++ +  
Sbjct: 115 IDRLIKLRPFVRDFLKEANEMFTMFVYTMGSRIYAKAILEMIDPKKLYFGNRVITKDESP 174

Query: 117 QKHQKGLDVVLGPESAILILDDT 139
           +   K L++VL  E  ++I+DDT
Sbjct: 175 R--MKTLNLVLAEERGVVIVDDT 195


>AT2G33540.1 | Symbols: CPL3, ATCPL3 | C-terminal domain
            phosphatase-like 3 | chr2:14204081-14208797 REVERSE
            LENGTH=1241
          Length = 1241

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 8/100 (8%)

Query: 51   LFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVI 110
            LF+   +   TKLRP +  FL++ASK++E+++YTM ++ YA E+ KLLDP+G  FN +VI
Sbjct: 970  LFRFLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKLLDPKGVLFNGRVI 1029

Query: 111  SRYDGTQ--------KHQKGLDVVLGPESAILILDDTHRV 142
            S+ D              K L+ V+G ES+++I+DD+ RV
Sbjct: 1030 SKGDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDSVRV 1069


>AT1G43610.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr1:16424578-16425345
           FORWARD LENGTH=255
          Length = 255

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 5/107 (4%)

Query: 39  QTDSQEDISNGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLL 98
           +TDS++D+   ++   +  E + KLRPF+  FL EA+K+F M++YTM S  YA +V+KL+
Sbjct: 82  ETDSRQDLWRRNV---DGYEFIIKLRPFLHEFLLEANKLFTMHVYTMGSSSYAKQVLKLI 138

Query: 99  DPQGEYFNDKVISRYDGTQKHQKGLDVVLGPESAILILDDTHRVSSF 145
           DP   YF  +VI+R        K LD++   +  ++I+DDT  V  F
Sbjct: 139 DPDKVYFGKRVITR--EASPFNKSLDLLAADKRRVVIVDDTVHVWPF 183


>AT1G43600.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr1:16415357-16416022
           FORWARD LENGTH=221
          Length = 221

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 5/107 (4%)

Query: 39  QTDSQEDISNGSLFKLECVERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLL 98
           +TDS++D+   ++   +  E + KLRPF+  FL EA+K+F M++YTM S  YA +V+KL+
Sbjct: 48  ETDSRQDLWRRNV---DGYEFIIKLRPFLHEFLLEANKLFTMHVYTMGSSSYAKQVLKLI 104

Query: 99  DPQGEYFNDKVISRYDGTQKHQKGLDVVLGPESAILILDDTHRVSSF 145
           DP   YF  +VI+R        K LD++   +  ++I+DDT  V  F
Sbjct: 105 DPDKVYFGKRVITR--EASPFNKSLDLLAADKRRVVIVDDTVHVWPF 149


>AT5G23470.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr5:7913861-7914769 FORWARD
           LENGTH=302
          Length = 302

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 2/85 (2%)

Query: 58  ERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVISRYDGTQ 117
           E + KLRPFV  FLKE ++MF MY+YT     YA  V++++DP   YF ++VI+R +   
Sbjct: 133 ESLIKLRPFVHQFLKECNEMFSMYVYTKGGYDYARLVLEMIDPDKFYFGNRVITRRESPG 192

Query: 118 KHQKGLDVVLGPESAILILDDTHRV 142
              K LD+VL  E  I+I+DDT  V
Sbjct: 193 --FKTLDLVLADERGIVIVDDTSSV 215


>AT2G02290.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr2:604453-605361 FORWARD
           LENGTH=302
          Length = 302

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 2/85 (2%)

Query: 58  ERMTKLRPFVRTFLKEASKMFEMYIYTMASRRYALEVVKLLDPQGEYFNDKVISRYDGTQ 117
           E + KLR FV  FLKE ++MF +Y+YT     YA  V++++DP   YF ++VI+R +   
Sbjct: 133 ESLIKLRSFVHQFLKECNEMFSLYVYTKGGYDYAQLVLEMIDPDKIYFGNRVITRRESPG 192

Query: 118 KHQKGLDVVLGPESAILILDDTHRV 142
              K LD+VL  E  I+++DD   V
Sbjct: 193 --FKTLDLVLADERGIVVVDDKSSV 215