Miyakogusa Predicted Gene
- Lj0g3v0206009.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0206009.1 Non Chatacterized Hit- tr|I1N4Y6|I1N4Y6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29316
PE,39.19,2e-19,seg,NULL; RNA POLYMERASE II CTD PHOSPHATASE,NULL;
NIF,NLI interacting factor; FCP1_euk: FCP1-like ph,CUFF.13169.1
(453 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72817 similar to UniRef100_Q9FJL6 Cluster: Gb|AAD2558... 260 7e-69
gnl|LJGI|TC61634 similar to UniRef100_A7QD70 Cluster: Chromosome... 168 2e-41
>gnl|LJGI|TC72817 similar to UniRef100_Q9FJL6 Cluster: Gb|AAD25584.1; n=2; Arabidopsis
thaliana|Rep: Gb|AAD25584.1 - Arabidopsis thaliana
(Mouse-ear cress), partial (17%)
Length = 1250
Score = 260 bits (131), Expect = 7e-69
Identities = 350/419 (83%), Gaps = 3/419 (0%)
Strand = Plus / Plus
Query: 2 tgaagaatttgttgtgtcagaaaaagctttacttggttcttgatctcgataacacattat 61
|||||||| ||||||||| ||||||||||||||||||||||| || ||| ||||| |
Sbjct: 625 tgaagaatctgttgtgtcgaaaaaagctttacttggttcttgacctagatcacacactgc 684
Query: 62 taaattccactcgccttggtag-tttga-gctcagaagagttgcact-tacttacccaga 118
| || ||||||| ||||| | ||||| |||| |||||| ||| | |||||||||||
Sbjct: 685 ttaactccactcaccttgctccatttgacgctctgaagaggggcagtgtacttacccagg 744
Query: 119 cagattctcaagaagatatctccaatggtagtctcttcaaattggagtgtgtggaaagga 178
||||||||| || |||| |||| |||||||||||||||||||||||| | || | | ||
Sbjct: 745 cagattctctaggagatgtctctaatggtagtctcttcaaattggagcatatgcatatga 804
Query: 179 tgaccaagttaaggccttttgtccgaacatttctaaaagaagctagcaagatgttcgaga 238
|||||||| | ||||||| | | || ||||||||||||||||| | | ||||| ||||
Sbjct: 805 tgaccaagctgaggccttctcttcggacatttctaaaagaagcaaatgaaatgtttgaga 864
Query: 239 tgtacatatacaccatggctagtcgacggtatgcactagaggtggttaagctccttgatc 298
|||||||||||||||||||| ||| | || || |||||| ||| |||||| |||||||
Sbjct: 865 tgtacatatacaccatggctgatcggccctacgctctagagatggctaagctgcttgatc 924
Query: 299 ctcaaggcgaatacttcaatgataaggtgatttctcgatatgatgggactcaaaagcatc 358
||| ||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 925 ctcgaggagaatacttcaatgcgaaggtgatttctcgagatgatgggactcaaaagcatc 984
Query: 359 agaaaggtcttgatgttgtgctggggccagaaagcgccatcctaattcttgatgacacg 417
|||| |||||||||||| ||||||||| |||||| || | || ||||| |||||||||
Sbjct: 985 agaagggtcttgatgttttgctggggcaagaaagtgcggttcttattctcgatgacacg 1043
>gnl|LJGI|TC61634 similar to UniRef100_A7QD70 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (56%)
Length = 867
Score = 168 bits (85), Expect = 2e-41
Identities = 163/189 (86%)
Strand = Plus / Plus
Query: 229 atgttcgagatgtacatatacaccatggctagtcgacggtatgcactagaggtggttaag 288
||||| |||||||||||||||||||||| | ||| | || || |||||| ||| ||||
Sbjct: 18 atgtttgagatgtacatatacaccatgggtgatcggccctacgctctagagatggctaag 77
Query: 289 ctccttgatcctcaaggcgaatacttcaatgataaggtgatttctcgatatgatgggact 348
|| |||||||||| ||| ||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 78 ctgcttgatcctcgaggagaatacttcaatgcgaaggtgatttctcgagatgatgggact 137
Query: 349 caaaagcatcagaaaggtcttgatgttgtgctggggccagaaagcgccatcctaattctt 408
|||||||||||||| |||||||||||| ||||||||| |||||| || | || |||||
Sbjct: 138 caaaagcatcagaagggtcttgatgttttgctggggcaagaaagtgcggttcttattctc 197
Query: 409 gatgacacg 417
|||||||||
Sbjct: 198 gatgacacg 206